| Clone Name | basd21b10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC093509.3| Homo sapiens chromosome 16 clone CTD-2337L2, complete sequence Length = 120592 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 atcagtgattcttccagtgtg 148 ||||||||||||||||||||| Sbjct: 40589 atcagtgattcttccagtgtg 40609
>gb|AC164660.3| Pan troglodytes BAC clone CH251-50D16 from chromosome unknown, complete sequence Length = 246546 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Minus Query: 128 atcagtgattcttccagtgtg 148 ||||||||||||||||||||| Sbjct: 41760 atcagtgattcttccagtgtg 41740
>emb|AL445471.13| Human DNA sequence from clone RP11-84D1 on chromosome 1 Contains the 5' end of the RUNX3 gene for runt-related transcription factor 3 and a novel gene, complete sequence Length = 10805 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 cctggcaacaatggtggtgg 110 |||||||||||||||||||| Sbjct: 5530 cctggcaacaatggtggtgg 5511
>emb|BX927148.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete genome; segment 1/10 Length = 348071 Score = 40.1 bits (20), Expect = 2.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 47 catgctggaaatctgagcagctggttta 74 |||||||||||||| |||||||| |||| Sbjct: 133776 catgctggaaatctcagcagctgattta 133749
>gb|AC092643.2| Homo sapiens BAC clone RP11-393P9 from 4, complete sequence Length = 151902 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 gattaacaaaggcagctgtg 194 |||||||||||||||||||| Sbjct: 52121 gattaacaaaggcagctgtg 52140
>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome Length = 3309401 Score = 40.1 bits (20), Expect = 2.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 47 catgctggaaatctgagcagctggttta 74 |||||||||||||| |||||||| |||| Sbjct: 133775 catgctggaaatctcagcagctgattta 133748
>emb|AJ238394.1|HSA238394 Homo sapiens AML2 gene (partial) Length = 7338 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 cctggcaacaatggtggtgg 110 |||||||||||||||||||| Sbjct: 1782 cctggcaacaatggtggtgg 1801 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,980,124 Number of Sequences: 3902068 Number of extensions: 1980124 Number of successful extensions: 131068 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 131031 Number of HSP's gapped (non-prelim): 37 length of query: 226 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 204 effective length of database: 17,147,199,772 effective search space: 3498028753488 effective search space used: 3498028753488 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)