| Clone Name | basd21a17 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 795 bits (401), Expect = 0.0 Identities = 408/411 (99%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120021 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 119962 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119961 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 119902 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119901 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 119842 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119841 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 119782 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 119781 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 119722 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119721 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 119662 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 119661 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 119611 Score = 795 bits (401), Expect = 0.0 Identities = 408/411 (99%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94873 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 94932 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94933 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 94992 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94993 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 95052 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95053 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 95112 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 95113 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 95172 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95173 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 95232 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 95233 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 95283
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 787 bits (397), Expect = 0.0 Identities = 407/411 (99%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118802 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 118743 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 118742 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 118683 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118682 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 118623 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118622 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 118563 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 118562 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 118503 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 118502 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 118443 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 118442 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 118392
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 787 bits (397), Expect = 0.0 Identities = 407/411 (99%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 932 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 873 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 872 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 813 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 812 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 753 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 752 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 693 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 692 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 633 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 632 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 573 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 572 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 522
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 787 bits (397), Expect = 0.0 Identities = 407/411 (99%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119886 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 119827 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119826 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 119767 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119766 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 119707 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119706 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 119647 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 119646 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 119587 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119586 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 119527 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 119526 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 119476 Score = 787 bits (397), Expect = 0.0 Identities = 407/411 (99%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95270 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 95329 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95330 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 95389 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95390 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 95449 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95450 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 95509 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 95510 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 95569 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95570 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 95629 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 95630 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 95680
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 787 bits (397), Expect = 0.0 Identities = 407/411 (99%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119886 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 119827 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119826 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 119767 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119766 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 119707 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119706 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 119647 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 119646 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 119587 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119586 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 119527 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 119526 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 119476 Score = 787 bits (397), Expect = 0.0 Identities = 407/411 (99%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95270 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 95329 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95330 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 95389 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95390 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 95449 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95450 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 95509 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 95510 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 95569 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95570 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 95629 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 95630 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 95680
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 787 bits (397), Expect = 0.0 Identities = 407/411 (99%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119835 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 119776 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119775 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 119716 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119715 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 119656 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119655 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 119596 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 119595 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 119536 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119535 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 119476 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 119475 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 119425 Score = 787 bits (397), Expect = 0.0 Identities = 407/411 (99%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95215 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 95274 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95275 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 95334 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95335 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 95394 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95395 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 95454 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 95455 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 95514 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95515 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 95574 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 95575 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 95625
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 787 bits (397), Expect = 0.0 Identities = 407/411 (99%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507848 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 31507907 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 31507908 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 31507967 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507968 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 31508027 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508028 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 31508087 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 31508088 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 31508147 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 31508148 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 31508207 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508208 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 31508258
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 787 bits (397), Expect = 0.0 Identities = 407/411 (99%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84748 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 84689 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 84688 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 84629 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84628 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 84569 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84568 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 84509 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 84508 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 84449 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 84448 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 84389 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 84388 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 84338
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 787 bits (397), Expect = 0.0 Identities = 407/411 (99%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119855 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 119796 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119795 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 119736 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119735 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 119676 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119675 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 119616 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 119615 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 119556 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119555 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 119496 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 119495 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 119445 Score = 787 bits (397), Expect = 0.0 Identities = 407/411 (99%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95263 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 95322 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95323 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 95382 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95383 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 95442 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95443 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 95502 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 95503 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 95562 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95563 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 95622 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 95623 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 95673
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 787 bits (397), Expect = 0.0 Identities = 407/411 (99%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122312 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 122371 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 122372 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 122431 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122432 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 122491 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122492 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 122551 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 122552 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 122611 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 122612 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 122671 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 122672 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 122722 Score = 779 bits (393), Expect = 0.0 Identities = 406/411 (98%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14037 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 14096 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 14097 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 14156 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14157 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 14216 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14217 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 14276 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 14277 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 14336 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 14337 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcctgt 14396 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 14397 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 14447
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 787 bits (397), Expect = 0.0 Identities = 407/411 (99%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93441 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93500 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 93501 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 93560 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93561 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 93620 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93621 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 93680 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 93681 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 93740 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 93741 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 93800 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 93801 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 93851
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 787 bits (397), Expect = 0.0 Identities = 407/411 (99%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44846 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 44787 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 44786 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 44727 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44726 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 44667 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44666 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 44607 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 44606 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 44547 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 44546 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 44487 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 44486 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 44436 Score = 787 bits (397), Expect = 0.0 Identities = 407/411 (99%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20272 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 20331 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 20332 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 20391 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20392 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 20451 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20452 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 20511 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 20512 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 20571 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 20572 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 20631 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 20632 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 20682
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 787 bits (397), Expect = 0.0 Identities = 407/411 (99%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58574 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 58515 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 58514 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 58455 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58454 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 58395 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58394 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 58335 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 58334 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 58275 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 58274 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 58215 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 58214 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 58164
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 787 bits (397), Expect = 0.0 Identities = 407/411 (99%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1475 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 1416 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1415 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 1356 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1355 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 1296 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1295 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 1236 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1235 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 1176 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1175 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 1116 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1115 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 1065
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 787 bits (397), Expect = 0.0 Identities = 407/411 (99%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27505 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 27564 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 27565 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 27624 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27625 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 27684 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27685 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 27744 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 27745 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 27804 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 27805 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 27864 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 27865 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 27915
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 787 bits (397), Expect = 0.0 Identities = 407/411 (99%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268197 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 9268256 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9268257 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 9268316 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268317 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 9268376 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268377 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 9268436 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 9268437 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 9268496 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9268497 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 9268556 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268557 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 9268607 Score = 787 bits (397), Expect = 0.0 Identities = 407/411 (99%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227697 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 9227756 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9227757 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 9227816 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227817 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 9227876 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227877 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 9227936 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 9227937 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 9227996 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9227997 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 9228056 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228057 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 9228107 Score = 787 bits (397), Expect = 0.0 Identities = 407/411 (99%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164286 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 9164345 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9164346 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 9164405 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164406 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 9164465 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164466 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 9164525 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 9164526 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 9164585 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9164586 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 9164645 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164646 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 9164696 Score = 779 bits (393), Expect = 0.0 Identities = 406/411 (98%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056111 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 9056170 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9056171 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 9056230 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056231 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 9056290 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056291 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 9056350 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 9056351 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 9056410 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 9056411 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcctgt 9056470 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056471 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 9056521
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 787 bits (397), Expect = 0.0 Identities = 407/411 (99%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938182 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 19938241 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19938242 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 19938301 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938302 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 19938361 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938362 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 19938421 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 19938422 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 19938481 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19938482 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 19938541 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938542 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 19938592 Score = 787 bits (397), Expect = 0.0 Identities = 407/411 (99%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387049 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 10387108 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10387109 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 10387168 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387169 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 10387228 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387229 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 10387288 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 10387289 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 10387348 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10387349 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 10387408 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387409 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 10387459 Score = 787 bits (397), Expect = 0.0 Identities = 407/411 (99%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277249 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 10277190 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10277189 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 10277130 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277129 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 10277070 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277069 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 10277010 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 10277009 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 10276950 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10276949 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 10276890 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276889 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 10276839 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 245 ttgtgctgctaggcgaagcggttgagtgc 273 ||||||| ||||| ||||||||||||||| Sbjct: 8517723 ttgtgcttctaggtgaagcggttgagtgc 8517751
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 787 bits (397), Expect = 0.0 Identities = 407/411 (99%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598364 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 31598423 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 31598424 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 31598483 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598484 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 31598543 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598544 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 31598603 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 31598604 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 31598663 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 31598664 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 31598723 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598724 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 31598774
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 787 bits (397), Expect = 0.0 Identities = 407/411 (99%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525680 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 33525739 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 33525740 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 33525799 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525800 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 33525859 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525860 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 33525919 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 33525920 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 33525979 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 33525980 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 33526039 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526040 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 33526090 Score = 46.1 bits (23), Expect = 0.090 Identities = 26/27 (96%) Strand = Plus / Plus Query: 2 agggcgtagcaagcgacgaaatgcttc 28 ||||| ||||||||||||||||||||| Sbjct: 19455170 agggcatagcaagcgacgaaatgcttc 19455196
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 787 bits (397), Expect = 0.0 Identities = 407/411 (99%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47861 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 47802 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 47801 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 47742 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47741 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 47682 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47681 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 47622 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 47621 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 47562 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 47561 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 47502 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 47501 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 47451
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 787 bits (397), Expect = 0.0 Identities = 407/411 (99%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70877 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 70936 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 70937 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 70996 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70997 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 71056 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71057 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 71116 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 71117 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 71176 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 71177 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 71236 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 71237 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 71287
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 787 bits (397), Expect = 0.0 Identities = 407/411 (99%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123685 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 123626 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 123625 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 123566 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123565 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 123506 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123505 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 123446 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 123445 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 123386 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 123385 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 123326 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 123325 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 123275 Score = 787 bits (397), Expect = 0.0 Identities = 407/411 (99%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99152 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 99211 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 99212 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 99271 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99272 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 99331 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99332 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 99391 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 99392 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 99451 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 99452 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 99511 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 99512 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 99562
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 787 bits (397), Expect = 0.0 Identities = 407/411 (99%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 49 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 108 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 109 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 168 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 169 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 228 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 229 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 288 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 289 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 348 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 349 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 408 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 409 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 459
>dbj|AK105328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A07, full insert sequence Length = 1055 Score = 787 bits (397), Expect = 0.0 Identities = 407/411 (99%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 109 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 110 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 169 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 170 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 229 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 230 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 289 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 290 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 349 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 350 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 409 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 410 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 460
>dbj|AK059835.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C02, full insert sequence Length = 1395 Score = 787 bits (397), Expect = 0.0 Identities = 407/411 (99%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 105 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 165 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 166 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 225 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 226 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 285 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 286 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 345 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 346 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 405 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 406 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 456
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 787 bits (397), Expect = 0.0 Identities = 407/411 (99%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949458 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 19949517 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19949518 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 19949577 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949578 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 19949637 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949638 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 19949697 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 19949698 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 19949757 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19949758 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 19949817 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949818 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 19949868 Score = 787 bits (397), Expect = 0.0 Identities = 407/411 (99%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393088 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 10393147 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10393148 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 10393207 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393208 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 10393267 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393268 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 10393327 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 10393328 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 10393387 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10393388 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 10393447 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393448 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 10393498 Score = 787 bits (397), Expect = 0.0 Identities = 407/411 (99%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283288 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 10283229 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10283228 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 10283169 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283168 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 10283109 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283108 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 10283049 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 10283048 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 10282989 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10282988 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 10282929 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282928 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 10282878 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 245 ttgtgctgctaggcgaagcggttgagtgc 273 ||||||| ||||| ||||||||||||||| Sbjct: 8522822 ttgtgcttctaggtgaagcggttgagtgc 8522850
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 787 bits (397), Expect = 0.0 Identities = 407/411 (99%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124402 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 124343 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 124342 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 124283 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124282 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 124223 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124222 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 124163 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 124162 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 124103 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 124102 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 124043 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 124042 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 123992 Score = 787 bits (397), Expect = 0.0 Identities = 407/411 (99%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99829 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 99888 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 99889 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 99948 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99949 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 100008 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100009 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 100068 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 100069 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 100128 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 100129 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 100188 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 100189 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 100239
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 787 bits (397), Expect = 0.0 Identities = 407/411 (99%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119829 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 119770 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119769 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 119710 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119709 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 119650 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119649 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 119590 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 119589 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 119530 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119529 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 119470 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 119469 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 119419 Score = 787 bits (397), Expect = 0.0 Identities = 407/411 (99%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95210 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 95269 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95270 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 95329 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95330 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 95389 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95390 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 95449 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 95450 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 95509 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95510 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 95569 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 95570 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 95620
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 779 bits (393), Expect = 0.0 Identities = 406/411 (98%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140845 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 140904 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 140905 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 140964 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140965 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 141024 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141025 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 141084 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 141085 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 141144 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 141145 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcctgt 141204 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 141205 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 141255
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 779 bits (393), Expect = 0.0 Identities = 406/411 (98%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9242084 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 9242025 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9242024 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 9241965 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241964 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 9241905 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241904 gcagcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 9241845 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 9241844 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 9241785 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9241784 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 9241725 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241724 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 9241674 Score = 67.9 bits (34), Expect = 2e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 127 actgaaacatcttagtagccagaggaaaagaaag 160 |||||||||||||||||||||||||||||||||| Sbjct: 10177929 actgaaacatcttagtagccagaggaaaagaaag 10177896
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 779 bits (393), Expect = 0.0 Identities = 406/411 (98%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53297 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 53238 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 53237 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 53178 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53177 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 53118 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53117 gcagcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 53058 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 53057 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 52998 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 52997 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 52938 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 52937 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 52887
>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full insert sequence Length = 3614 Score = 779 bits (393), Expect = 0.0 Identities = 406/411 (98%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 65 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 66 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 125 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 185 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 186 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcagtaca 245 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 246 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 305 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 306 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 365 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 366 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 416
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 733 bits (370), Expect = 0.0 Identities = 399/408 (97%), Gaps = 1/408 (0%) Strand = Plus / Minus Query: 4 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcc 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123621 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcc 123562 Query: 64 caaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctgg 123 |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 123561 caaataggtcaaccttttgaactgcctgccgaatccatgagcaggcaagagacaacctgg 123502 Query: 124 cgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123501 cgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcg 123442 Query: 184 gcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagc 243 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 123441 gcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggtgagcaatacaagc 123382 Query: 244 gttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagcc 303 ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 123381 gttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctatagtccagtagcc 123322 Query: 304 gaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtg 363 || ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 123321 gatagcatcact-gcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtg 123263 Query: 364 aatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 123262 aatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 123215 Score = 733 bits (370), Expect = 0.0 Identities = 399/408 (97%), Gaps = 1/408 (0%) Strand = Plus / Plus Query: 4 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcc 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99116 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcc 99175 Query: 64 caaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctgg 123 |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 99176 caaataggtcaaccttttgaactgcctgccgaatccatgagcaggcaagagacaacctgg 99235 Query: 124 cgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99236 cgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcg 99295 Query: 184 gcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagc 243 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 99296 gcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggtgagcaatacaagc 99355 Query: 244 gttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagcc 303 ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 99356 gttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctatagtccagtagcc 99415 Query: 304 gaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtg 363 || ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 99416 gatagcatcact-gcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtg 99474 Query: 364 aatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 99475 aatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 99522
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 733 bits (370), Expect = 0.0 Identities = 399/408 (97%), Gaps = 1/408 (0%) Strand = Plus / Plus Query: 4 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcc 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5469 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcc 5528 Query: 64 caaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctgg 123 |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 5529 caaataggtcaaccttttgaactgcctgccgaatccatgagcaggcaagagacaacctgg 5588 Query: 124 cgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5589 cgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcg 5648 Query: 184 gcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagc 243 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 5649 gcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggtgagcaatacaagc 5708 Query: 244 gttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagcc 303 ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 5709 gttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctatagtccagtagcc 5768 Query: 304 gaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtg 363 || ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 5769 gatagcatcact-gcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtg 5827 Query: 364 aatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 5828 aatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 5875
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 733 bits (370), Expect = 0.0 Identities = 399/408 (97%), Gaps = 1/408 (0%) Strand = Plus / Plus Query: 4 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcc 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcc 116 Query: 64 caaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctgg 123 |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 117 caaataggtcaaccttttgaactgcctgccgaatccatgagcaggcaagagacaacctgg 176 Query: 124 cgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177 cgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcg 236 Query: 184 gcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagc 243 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 237 gcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggtgagcaatacaagc 296 Query: 244 gttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagcc 303 ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 297 gttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctatagtccagtagcc 356 Query: 304 gaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtg 363 || ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 357 gatagcatcact-gcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtg 415 Query: 364 aatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 416 aatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 463
>dbj|AK060245.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G06, full insert sequence Length = 1707 Score = 714 bits (360), Expect = 0.0 Identities = 370/374 (98%) Strand = Plus / Plus Query: 38 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 97 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1 aaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaat 60 Query: 98 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 157 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 120 Query: 158 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 217 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 180 Query: 218 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 277 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 240 Query: 278 ccctanatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 337 ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 241 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 300 Query: 338 gcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggctaaatact 397 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 301 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 360 Query: 398 cctgggtgaccgat 411 |||||||||||||| Sbjct: 361 cctgggtgaccgat 374
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 708 bits (357), Expect = 0.0 Identities = 398/411 (96%), Gaps = 1/411 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136540 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 136481 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||| Sbjct: 136480 tcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacc 136422 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136421 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 136362 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136361 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 136302 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 ||||| |||||||||||||||||||| |||||| |||||||| ||||| | ||||||||| Sbjct: 136301 agcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagta 136242 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 136241 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 136182 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 136181 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 136131 Score = 708 bits (357), Expect = 0.0 Identities = 398/411 (96%), Gaps = 1/411 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105885 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 105944 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||| Sbjct: 105945 tcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacc 106003 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106004 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 106063 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106064 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 106123 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 ||||| |||||||||||||||||||| |||||| |||||||| ||||| | ||||||||| Sbjct: 106124 agcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagta 106183 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106184 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 106243 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106244 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 106294
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 700 bits (353), Expect = 0.0 Identities = 397/411 (96%), Gaps = 1/411 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132724 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 132665 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||| ||||||| ||||||| ||||||||||||| ||||||||||||||||| Sbjct: 132664 tcccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacc 132606 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132605 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 132546 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132545 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 132486 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 ||||| ||||||||||||||||| || || ||| |||||||| ||||| ||||||||||| Sbjct: 132485 agcgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaagtccagta 132426 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132425 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 132366 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 132365 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 132315 Score = 700 bits (353), Expect = 0.0 Identities = 397/411 (96%), Gaps = 1/411 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104154 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 104213 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||| ||||||| ||||||| ||||||||||||| ||||||||||||||||| Sbjct: 104214 tcccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacc 104272 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104273 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 104332 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104333 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 104392 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 ||||| ||||||||||||||||| || || ||| |||||||| ||||| ||||||||||| Sbjct: 104393 agcgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaagtccagta 104452 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104453 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 104512 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 104513 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 104563
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 700 bits (353), Expect = 0.0 Identities = 397/411 (96%), Gaps = 1/411 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 132947 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagat 132888 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 132887 tcccgaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaagagacaacc 132829 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132828 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 132769 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 132768 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataaa 132709 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 ||||| |||||||||||||||||||| ||||||||||||||| ||||| | ||||||||| Sbjct: 132708 agcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtccagta 132649 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132648 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 132589 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 132588 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 132538 Score = 700 bits (353), Expect = 0.0 Identities = 397/411 (96%), Gaps = 1/411 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 103817 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagat 103876 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 103877 tcccgaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaagagacaacc 103935 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103936 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 103995 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 103996 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataaa 104055 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 ||||| |||||||||||||||||||| ||||||||||||||| ||||| | ||||||||| Sbjct: 104056 agcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtccagta 104115 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104116 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 104175 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 104176 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 104226
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 700 bits (353), Expect = 0.0 Identities = 397/411 (96%), Gaps = 1/411 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132717 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 132658 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||| ||||||| ||||||| ||||||||||||| ||||||||||||||||| Sbjct: 132657 tcccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacc 132599 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132598 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 132539 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132538 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 132479 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 ||||| ||||||||||||||||| || || ||| |||||||| ||||| ||||||||||| Sbjct: 132478 agcgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaagtccagta 132419 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132418 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 132359 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 132358 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 132308 Score = 700 bits (353), Expect = 0.0 Identities = 397/411 (96%), Gaps = 1/411 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104152 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 104211 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||| ||||||| ||||||| ||||||||||||| ||||||||||||||||| Sbjct: 104212 tcccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacc 104270 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104271 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 104330 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104331 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 104390 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 ||||| ||||||||||||||||| || || ||| |||||||| ||||| ||||||||||| Sbjct: 104391 agcgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaagtccagta 104450 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104451 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 104510 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 104511 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 104561
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 698 bits (352), Expect = 0.0 Identities = 362/366 (98%) Strand = Plus / Plus Query: 46 catagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagc 105 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1 catagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagc 60 Query: 106 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 120 Query: 166 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 180 Query: 226 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctanat 285 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 181 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagat 240 Query: 286 ggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgggg 345 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 241 ggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgggg 300 Query: 346 cacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtg 405 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 301 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 360 Query: 406 accgat 411 |||||| Sbjct: 361 accgat 366
>dbj|AK107856.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-B02, full insert sequence Length = 998 Score = 696 bits (351), Expect = 0.0 Identities = 361/365 (98%) Strand = Plus / Plus Query: 47 atagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagca 106 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 atagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagca 60 Query: 107 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 120 Query: 167 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 180 Query: 227 gggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatg 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 181 gggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 240 Query: 287 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 346 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 241 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 300 Query: 347 acgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtga 406 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 301 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 360 Query: 407 ccgat 411 ||||| Sbjct: 361 ccgat 365
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 696 bits (351), Expect = 0.0 Identities = 395/409 (96%), Gaps = 1/409 (0%) Strand = Plus / Minus Query: 3 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 62 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130482 gggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 130423 Query: 63 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 122 || ||||||||||||||| |||| | ||||||||||||| ||||||||||||||||||| Sbjct: 130422 ccgaataggtcaacctttcgaactac-tgctgaatccatgggcaggcaagagacaacctg 130364 Query: 123 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130363 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 130304 Query: 183 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 242 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 130303 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagctatacaag 130244 Query: 243 cgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagc 302 ||| |||||||||||||||||||| ||||||||||||||| ||||| | ||||||||||| Sbjct: 130243 cgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtccagtagc 130184 Query: 303 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130183 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 130124 Query: 363 gaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 130123 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 130075 Score = 696 bits (351), Expect = 0.0 Identities = 395/409 (96%), Gaps = 1/409 (0%) Strand = Plus / Plus Query: 3 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 62 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101974 gggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 102033 Query: 63 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 122 || ||||||||||||||| |||| | ||||||||||||| ||||||||||||||||||| Sbjct: 102034 ccgaataggtcaacctttcgaactac-tgctgaatccatgggcaggcaagagacaacctg 102092 Query: 123 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102093 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 102152 Query: 183 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 242 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 102153 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagctatacaag 102212 Query: 243 cgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagc 302 ||| |||||||||||||||||||| ||||||||||||||| ||||| | ||||||||||| Sbjct: 102213 cgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtccagtagc 102272 Query: 303 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102273 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 102332 Query: 363 gaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 102333 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 102381
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 692 bits (349), Expect = 0.0 Identities = 396/411 (96%), Gaps = 1/411 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131616 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 131557 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||| ||||||| ||||||| ||||||||||||| ||||||||||||||||| Sbjct: 131556 tcccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacc 131498 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131497 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 131438 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131437 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 131378 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 ||||| ||||||||||||||||| || || ||| |||||||| ||||| ||||||||||| Sbjct: 131377 agcgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaagtccagta 131318 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 131317 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 131258 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 131257 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 131207 Score = 692 bits (349), Expect = 0.0 Identities = 396/411 (96%), Gaps = 1/411 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103019 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 103078 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||| ||||||| ||||||| ||||||||||||| ||||||||||||||||| Sbjct: 103079 tcccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacc 103137 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103138 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 103197 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103198 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 103257 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 ||||| ||||||||||||||||| || || ||| |||||||| ||||| ||||||||||| Sbjct: 103258 agcgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaagtccagta 103317 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 103318 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 103377 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 103378 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 103428
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 692 bits (349), Expect = 0.0 Identities = 396/411 (96%), Gaps = 1/411 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139535 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 139476 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 139475 tcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 139417 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139416 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 139357 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139356 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 139297 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 ||||| |||||||||||||||||||| |||| | |||||||| ||||| | ||||||||| Sbjct: 139296 agcgtcgtgctgctaggcgaagcggtggagtactgcaccctagatggcgagagtccagta 139237 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 139236 gccgaaagcatcactggcttacgctctgacccgagtagcatggggcacgtggaatcccgt 139177 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 139176 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 139126 Score = 692 bits (349), Expect = 0.0 Identities = 396/411 (96%), Gaps = 1/411 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110410 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 110469 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 110470 tcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 110528 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110529 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 110588 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110589 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 110648 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 ||||| |||||||||||||||||||| |||| | |||||||| ||||| | ||||||||| Sbjct: 110649 agcgtcgtgctgctaggcgaagcggtggagtactgcaccctagatggcgagagtccagta 110708 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 110709 gccgaaagcatcactggcttacgctctgacccgagtagcatggggcacgtggaatcccgt 110768 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 110769 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 110819
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 692 bits (349), Expect = 0.0 Identities = 396/411 (96%), Gaps = 1/411 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 59 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagat 118 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||| Sbjct: 119 tcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacc 177 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 178 tggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccgtagta 237 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 238 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 297 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 ||||| |||||||||||||||||||| |||||| |||||||| ||||| | ||||||||| Sbjct: 298 agcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagta 357 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 358 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 417 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 418 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 468
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 692 bits (349), Expect = 0.0 Identities = 396/411 (96%), Gaps = 1/411 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 59 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagat 118 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||| Sbjct: 119 tcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacc 177 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 178 tggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccgtagta 237 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 238 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 297 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 ||||| |||||||||||||||||||| |||||| |||||||| ||||| | ||||||||| Sbjct: 298 agcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagta 357 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 358 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 417 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 418 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 468
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 692 bits (349), Expect = 0.0 Identities = 396/411 (96%), Gaps = 1/411 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134172 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 134113 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 134112 tcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 134054 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134053 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 133994 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133993 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 133934 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 ||||| ||||||||||||||||| || || ||| |||||||| ||||| | ||||||||| Sbjct: 133933 agcgtcgtgctgctaggcgaagcagtggaatgctgcaccctagatggcgagagtccagta 133874 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 133873 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 133814 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 133813 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 133763 Score = 692 bits (349), Expect = 0.0 Identities = 396/411 (96%), Gaps = 1/411 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103799 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 103858 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 103859 tcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 103917 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103918 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 103977 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103978 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 104037 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 ||||| ||||||||||||||||| || || ||| |||||||| ||||| | ||||||||| Sbjct: 104038 agcgtcgtgctgctaggcgaagcagtggaatgctgcaccctagatggcgagagtccagta 104097 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 104098 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 104157 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 104158 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 104208
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 692 bits (349), Expect = 0.0 Identities = 396/411 (96%), Gaps = 1/411 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 133908 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagat 133849 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 133848 tcccgaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaagagacaacc 133790 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133789 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 133730 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct: 133729 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaaaaaa 133670 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 ||||| |||||||||||||||||||| ||||||||||||||| ||||| | ||||||||| Sbjct: 133669 agcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtccagta 133610 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133609 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 133550 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 133549 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 133499 Score = 692 bits (349), Expect = 0.0 Identities = 396/411 (96%), Gaps = 1/411 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 104741 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagat 104800 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 104801 tcccgaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaagagacaacc 104859 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104860 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 104919 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct: 104920 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaaaaaa 104979 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 ||||| |||||||||||||||||||| ||||||||||||||| ||||| | ||||||||| Sbjct: 104980 agcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtccagta 105039 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105040 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 105099 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 105100 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 105150
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 684 bits (345), Expect = 0.0 Identities = 395/411 (96%), Gaps = 1/411 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140309 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 140250 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 140249 tcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 140191 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140190 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 140131 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140130 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 140071 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 ||||| ||||||||||||||||||| || ||| |||||||| ||||| | ||||||||| Sbjct: 140070 agcgtcgtgctgctaggcgaagcggcggaatgctgcaccctagatggcgagagtccagta 140011 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 140010 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 139951 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 139950 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 139900 Score = 684 bits (345), Expect = 0.0 Identities = 395/411 (96%), Gaps = 1/411 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109751 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 109810 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 109811 tcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 109869 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109870 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 109929 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109930 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 109989 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 ||||| ||||||||||||||||||| || ||| |||||||| ||||| | ||||||||| Sbjct: 109990 agcgtcgtgctgctaggcgaagcggcggaatgctgcaccctagatggcgagagtccagta 110049 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 110050 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 110109 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 110110 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 110160
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 684 bits (345), Expect = 0.0 Identities = 395/411 (96%), Gaps = 1/411 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134930 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 134871 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 134870 tcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 134812 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134811 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 134752 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134751 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 134692 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 ||||| ||||||||||||||||| || |||||| |||||||| ||||||| ||||||||| Sbjct: 134691 agcgtcgtgctgctaggcgaagcagtggagtgctgcaccctagatggctagagtccagta 134632 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||| Sbjct: 134631 gccgaaagcatcactagcttacgttctaacccgagtagcatggggcacgtggaatcccgt 134572 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 134571 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 134521 Score = 684 bits (345), Expect = 0.0 Identities = 395/411 (96%), Gaps = 1/411 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105352 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 105411 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 105412 tcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 105470 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105471 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 105530 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105531 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 105590 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 ||||| ||||||||||||||||| || |||||| |||||||| ||||||| ||||||||| Sbjct: 105591 agcgtcgtgctgctaggcgaagcagtggagtgctgcaccctagatggctagagtccagta 105650 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||| Sbjct: 105651 gccgaaagcatcactagcttacgttctaacccgagtagcatggggcacgtggaatcccgt 105710 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 105711 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 105761
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 684 bits (345), Expect = 0.0 Identities = 395/411 (96%), Gaps = 1/411 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 50 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagat 109 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 110 tcccgaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaagagacaacc 168 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 169 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 228 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct: 229 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaaaaaa 288 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 ||||| |||||||||||||||||||| ||||||||||||||| ||||| | ||||||||| Sbjct: 289 agcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtccagta 348 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 349 gccgagagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 408 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 409 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 459
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 684 bits (345), Expect = 0.0 Identities = 395/411 (96%), Gaps = 1/411 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46303 aagggcgtattaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 46362 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 46363 tcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 46421 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 46422 tggcgaactgaaacatcttactagccagaggaaaagaaagcaaaagcgattcccgtagta 46481 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 46482 gcggcgagcgaaatgggaacagcctaaaccgtgaaaacggggttgtgggagagcaataca 46541 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 ||||| |||||||||||||||||||| |||| |||||||||| ||||||| ||||||||| Sbjct: 46542 agcgtcgtgctgctaggcgaagcggtggagtaccgcaccctagatggctagagtccagta 46601 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46602 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 46661 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 46662 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 46712
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 684 bits (345), Expect = 0.0 Identities = 395/411 (96%), Gaps = 1/411 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 59 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagat 118 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||| Sbjct: 119 tcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacc 177 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 178 tggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccgtagta 237 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 238 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 297 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 ||||| |||||||||||||||||||| |||||| |||||||| ||||| | ||||||||| Sbjct: 298 agcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagta 357 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 358 gccgaaagcatccctagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 417 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 418 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 468
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 684 bits (345), Expect = 0.0 Identities = 395/411 (96%), Gaps = 1/411 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 59 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagat 118 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||| Sbjct: 119 tcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacc 177 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 178 tggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccgtagta 237 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 238 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 297 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 ||||| ||||||||||||||||| || |||||| |||||||| ||||| | ||||||||| Sbjct: 298 agcgtcgtgctgctaggcgaagcagtggagtgctgcaccctagatggcgagagtccagta 357 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 358 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 417 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 418 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 468
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 684 bits (345), Expect = 0.0 Identities = 395/411 (96%), Gaps = 1/411 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 59 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagat 118 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||| Sbjct: 119 tcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacc 177 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 178 tggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccgtagta 237 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 238 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 297 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 ||||| |||||||||||||||||||| |||||| |||||||| ||||| | ||||||||| Sbjct: 298 agcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagta 357 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 358 gccgaaagcatccctagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 417 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 418 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 468
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 684 bits (345), Expect = 0.0 Identities = 395/411 (96%), Gaps = 1/411 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127813 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 127754 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 127753 tcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 127695 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 127694 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccatagta 127635 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127634 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 127575 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 ||||| ||||||||||||||||||| |||||| |||||||| ||||| | ||||||||| Sbjct: 127574 agcgtcatgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagta 127515 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 127514 gccgaaaacatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 127455 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 127454 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 127404 Score = 684 bits (345), Expect = 0.0 Identities = 395/411 (96%), Gaps = 1/411 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107109 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 107168 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 107169 tcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 107227 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 107228 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccatagta 107287 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107288 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 107347 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 ||||| ||||||||||||||||||| |||||| |||||||| ||||| | ||||||||| Sbjct: 107348 agcgtcatgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagta 107407 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 107408 gccgaaaacatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 107467 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 107468 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 107518
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 682 bits (344), Expect = 0.0 Identities = 357/362 (98%) Strand = Plus / Plus Query: 50 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 109 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 60 Query: 110 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 169 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 120 Query: 170 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 229 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 180 Query: 230 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggct 289 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 181 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 240 Query: 290 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 349 ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 241 aaagtccagtagccgaaagcatcgctagcttacgctctgacccgagtagcatggggcacg 300 Query: 350 tggaatcccgtgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccg 409 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 360 Query: 410 at 411 || Sbjct: 361 at 362
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 676 bits (341), Expect = 0.0 Identities = 394/411 (95%), Gaps = 1/411 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 106056 aagggcgtagtaagcgacgaaatgcttcggggagttgcaaataagcgtagatccggagat 106115 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||| Sbjct: 106116 tcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacc 106174 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106175 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 106234 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106235 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 106294 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 ||||| ||||||||||||||||| || ||||| |||||||| ||||| | ||||||||| Sbjct: 106295 agcgtcgtgctgctaggcgaagcagtggagtgttgcaccctagatggcgagagtccagta 106354 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106355 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 106414 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106415 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 106465 Score = 626 bits (316), Expect = e-176 Identities = 393/414 (94%), Gaps = 4/414 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 135853 aagggcgtagtaagcgacgaaatgcttcggggagttgcaaataagcgtagatccggagat 135794 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||| Sbjct: 135793 tcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacc 135735 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135734 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 135675 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc-aatac 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 135674 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaaatac 135615 Query: 240 aagcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagt 299 |||||| ||||||||||||||||| || ||||| |||||||| ||||| | |||||||| Sbjct: 135614 aagcgtcgtgctgctaggcgaagcagtggagtgttgcaccctagatggcgagagtccagt 135555 Query: 300 agccgaaagcatcactagcttatg-ctctgacccgagtagcatggggcacgtggaatccc 358 |||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||| Sbjct: 135554 agccgaaagcatcactagcttacgcccctgacccgagtagcatggggcacgtggaatccc 135495 Query: 359 gtgtgaatcag-naaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135494 gtgtgaatcagccaaggaccaccttgcaaggctaaatactcctgggtgaccgat 135441
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 676 bits (341), Expect = 0.0 Identities = 394/411 (95%), Gaps = 1/411 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142057 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 141998 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||| ||||||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 141997 tcccgaatgggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 141939 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141938 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 141879 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141878 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 141819 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 ||||| ||||||||||||||||||||||||| | |||||||| ||||| | ||||||||| Sbjct: 141818 agcgtcgtgctgctaggcgaagcggttgagtactgcaccctagatggcgagagtccagta 141759 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 141758 accgaaagcatcactggcttacgctctgacccgagtagcatggggcacgtggaatcccgt 141699 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 141698 gtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgat 141648 Score = 676 bits (341), Expect = 0.0 Identities = 394/411 (95%), Gaps = 1/411 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111600 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 111659 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||| ||||||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 111660 tcccgaatgggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 111718 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111719 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 111778 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111779 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 111838 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 ||||| ||||||||||||||||||||||||| | |||||||| ||||| | ||||||||| Sbjct: 111839 agcgtcgtgctgctaggcgaagcggttgagtactgcaccctagatggcgagagtccagta 111898 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 111899 accgaaagcatcactggcttacgctctgacccgagtagcatggggcacgtggaatcccgt 111958 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 111959 gtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgat 112009
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 676 bits (341), Expect = 0.0 Identities = 394/411 (95%), Gaps = 1/411 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 59 aagggcgtagtaagcgacgaaatgcttcggggggttgaaaataagcgtagatccggagat 118 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||| Sbjct: 119 tcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacc 177 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 178 tggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccgtagta 237 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 238 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 297 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 ||||| |||||||||||||||||||| |||||| |||||||| ||||| | ||||||||| Sbjct: 298 agcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagta 357 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 358 gccgaaagcatccctagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 417 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 418 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 468
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 676 bits (341), Expect = 0.0 Identities = 394/411 (95%), Gaps = 1/411 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 136129 aagggcgtagtaagcgacgaaatgcttcggggagttgcaaataagcgtagatccggagat 136070 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||| Sbjct: 136069 tcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacc 136011 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136010 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 135951 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135950 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 135891 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 ||||| ||||||||||||||||| || ||||| |||||||| ||||| | ||||||||| Sbjct: 135890 agcgtcgtgctgctaggcgaagcagtggagtgttgcaccctagatggcgagagtccagta 135831 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 135830 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 135771 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135770 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 135720 Score = 676 bits (341), Expect = 0.0 Identities = 394/411 (95%), Gaps = 1/411 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 106278 aagggcgtagtaagcgacgaaatgcttcggggagttgcaaataagcgtagatccggagat 106337 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||| Sbjct: 106338 tcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacc 106396 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106397 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 106456 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106457 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 106516 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 ||||| ||||||||||||||||| || ||||| |||||||| ||||| | ||||||||| Sbjct: 106517 agcgtcgtgctgctaggcgaagcagtggagtgttgcaccctagatggcgagagtccagta 106576 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106577 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 106636 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106637 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 106687
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 670 bits (338), Expect = 0.0 Identities = 395/412 (95%), Gaps = 2/412 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 51 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagat 110 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||| Sbjct: 111 tcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacc 169 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 170 taacgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 229 Query: 181 gc-ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatac 239 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 230 gcaggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatac 289 Query: 240 aagcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagt 299 |||||| |||||||||||||||||||| ||||||| |||||| ||||||| |||||||| Sbjct: 290 aagcgtcgtgctgctaggcgaagcggtgaagtgccgaaccctagatggctagagtccagt 349 Query: 300 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 359 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 350 agccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccg 409 Query: 360 tgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 410 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 461
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 668 bits (337), Expect = 0.0 Identities = 351/356 (98%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 123419 aagggcgtagcaagcgacgaaatgcttcggggagttgaaattaagcatagatccggagat 123360 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 123359 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 123300 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123299 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 123240 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123239 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 123180 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 123179 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 123120 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 356 ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 123119 gccgaaagcatcactagcttacgctctgccccgagtagcatggggcacgtggaatc 123064 Score = 121 bits (61), Expect = 2e-24 Identities = 63/64 (98%) Strand = Plus / Minus Query: 348 cgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgac 407 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 122820 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 122761 Query: 408 cgat 411 |||| Sbjct: 122760 cgat 122757
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 668 bits (337), Expect = 0.0 Identities = 351/356 (98%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 12825960 aagggcgtagcaagcgacgaaatgcttcggggagttgaaattaagcatagatccggagat 12825901 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 12825900 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 12825841 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825840 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 12825781 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825780 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 12825721 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 12825720 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 12825661 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 356 ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 12825660 gccgaaagcatcactagcttacgctctgccccgagtagcatggggcacgtggaatc 12825605 Score = 121 bits (61), Expect = 2e-24 Identities = 63/64 (98%) Strand = Plus / Minus Query: 348 cgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgac 407 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 12825361 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 12825302 Query: 408 cgat 411 |||| Sbjct: 12825301 cgat 12825298 Score = 87.7 bits (44), Expect = 3e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 293 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 352 ||||||||||||||||||||||||||||||||||||| || |||||||||| ||| |||| Sbjct: 16021783 gtccagtagccgaaagcatcactagcttatgctctgaaccaagtagcatggcgcatgtgg 16021842
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 662 bits (334), Expect = 0.0 Identities = 394/412 (95%), Gaps = 2/412 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136249 aagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 136190 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 136189 tcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 136131 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136130 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 136071 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136070 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 136011 Query: 241 agcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctanatggctaaagtccagt 299 ||||| ||||||||||||||||| | || ||| |||||||| ||||| |||||||||| Sbjct: 136010 agcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagt 135951 Query: 300 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135950 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 135891 Query: 360 tgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135890 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 135839 Score = 662 bits (334), Expect = 0.0 Identities = 394/412 (95%), Gaps = 2/412 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106381 aagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 106440 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 106441 tcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 106499 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106500 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 106559 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106560 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 106619 Query: 241 agcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctanatggctaaagtccagt 299 ||||| ||||||||||||||||| | || ||| |||||||| ||||| |||||||||| Sbjct: 106620 agcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagt 106679 Query: 300 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106680 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 106739 Query: 360 tgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106740 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 106791
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 662 bits (334), Expect = 0.0 Identities = 394/412 (95%), Gaps = 2/412 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136887 aagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 136828 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 136827 tcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 136769 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136768 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 136709 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136708 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 136649 Query: 241 agcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctanatggctaaagtccagt 299 ||||| ||||||||||||||||| | ||| ||| |||||||| ||||| |||||||||| Sbjct: 136648 agcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagt 136589 Query: 300 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 359 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 136588 agccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccg 136529 Query: 360 tgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 136528 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 136477 Score = 662 bits (334), Expect = 0.0 Identities = 394/412 (95%), Gaps = 2/412 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106670 aagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 106729 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 106730 tcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 106788 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106789 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 106848 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106849 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 106908 Query: 241 agcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctanatggctaaagtccagt 299 ||||| ||||||||||||||||| | ||| ||| |||||||| ||||| |||||||||| Sbjct: 106909 agcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagt 106968 Query: 300 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 359 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 106969 agccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccg 107028 Query: 360 tgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 107029 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 107080
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 662 bits (334), Expect = 0.0 Identities = 394/412 (95%), Gaps = 2/412 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1575 aagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 1634 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 1635 tcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 1693 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1694 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 1753 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1754 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 1813 Query: 241 agcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctanatggctaaagtccagt 299 ||||| ||||||||||||||||| | || ||| |||||||| ||||| |||||||||| Sbjct: 1814 agcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagt 1873 Query: 300 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1874 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 1933 Query: 360 tgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1934 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 1985
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 662 bits (334), Expect = 0.0 Identities = 394/412 (95%), Gaps = 2/412 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135495 aagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 135436 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 135435 tcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 135377 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135376 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 135317 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135316 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 135257 Query: 241 agcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctanatggctaaagtccagt 299 ||||| ||||||||||||||||| | ||| ||| |||||||| ||||| |||||||||| Sbjct: 135256 agcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagt 135197 Query: 300 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 359 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 135196 agccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccg 135137 Query: 360 tgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135136 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 135085 Score = 662 bits (334), Expect = 0.0 Identities = 394/412 (95%), Gaps = 2/412 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105541 aagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 105600 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 105601 tcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 105659 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105660 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 105719 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105720 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 105779 Query: 241 agcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctanatggctaaagtccagt 299 ||||| ||||||||||||||||| | ||| ||| |||||||| ||||| |||||||||| Sbjct: 105780 agcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagt 105839 Query: 300 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 359 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 105840 agccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccg 105899 Query: 360 tgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 105900 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 105951
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 662 bits (334), Expect = 0.0 Identities = 394/412 (95%), Gaps = 2/412 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135630 aagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 135571 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 135570 tcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 135512 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135511 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 135452 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135451 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 135392 Query: 241 agcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctanatggctaaagtccagt 299 ||||| ||||||||||||||||| | ||| ||| |||||||| ||||| |||||||||| Sbjct: 135391 agcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagt 135332 Query: 300 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 359 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 135331 agccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccg 135272 Query: 360 tgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135271 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 135220 Score = 662 bits (334), Expect = 0.0 Identities = 394/412 (95%), Gaps = 2/412 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105713 aagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 105772 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 105773 tcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 105831 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105832 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 105891 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105892 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 105951 Query: 241 agcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctanatggctaaagtccagt 299 ||||| ||||||||||||||||| | ||| ||| |||||||| ||||| |||||||||| Sbjct: 105952 agcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagt 106011 Query: 300 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 359 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 106012 agccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccg 106071 Query: 360 tgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106072 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 106123
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 662 bits (334), Expect = 0.0 Identities = 394/412 (95%), Gaps = 2/412 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135628 aagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 135569 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 135568 tcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 135510 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135509 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 135450 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135449 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 135390 Query: 241 agcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctanatggctaaagtccagt 299 ||||| ||||||||||||||||| | ||| ||| |||||||| ||||| |||||||||| Sbjct: 135389 agcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagt 135330 Query: 300 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 359 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 135329 agccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccg 135270 Query: 360 tgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135269 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 135218 Score = 662 bits (334), Expect = 0.0 Identities = 394/412 (95%), Gaps = 2/412 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105710 aagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 105769 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 105770 tcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 105828 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105829 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 105888 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105889 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 105948 Query: 241 agcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctanatggctaaagtccagt 299 ||||| ||||||||||||||||| | ||| ||| |||||||| ||||| |||||||||| Sbjct: 105949 agcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagt 106008 Query: 300 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 359 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 106009 agccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccg 106068 Query: 360 tgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106069 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 106120
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 662 bits (334), Expect = 0.0 Identities = 394/412 (95%), Gaps = 2/412 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135540 aagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 135481 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 135480 tcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 135422 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135421 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 135362 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135361 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 135302 Query: 241 agcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctanatggctaaagtccagt 299 ||||| ||||||||||||||||| | ||| ||| |||||||| ||||| |||||||||| Sbjct: 135301 agcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagt 135242 Query: 300 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 359 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 135241 agccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccg 135182 Query: 360 tgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135181 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 135130 Score = 662 bits (334), Expect = 0.0 Identities = 394/412 (95%), Gaps = 2/412 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105588 aagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 105647 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 105648 tcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 105706 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105707 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 105766 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105767 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 105826 Query: 241 agcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctanatggctaaagtccagt 299 ||||| ||||||||||||||||| | ||| ||| |||||||| ||||| |||||||||| Sbjct: 105827 agcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagt 105886 Query: 300 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 359 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 105887 agccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccg 105946 Query: 360 tgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 105947 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 105998
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 662 bits (334), Expect = 0.0 Identities = 394/412 (95%), Gaps = 2/412 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136247 aagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 136188 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 136187 tcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 136129 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136128 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 136069 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136068 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 136009 Query: 241 agcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctanatggctaaagtccagt 299 ||||| ||||||||||||||||| | || ||| |||||||| ||||| |||||||||| Sbjct: 136008 agcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagt 135949 Query: 300 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135948 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 135889 Query: 360 tgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135888 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 135837 Score = 662 bits (334), Expect = 0.0 Identities = 394/412 (95%), Gaps = 2/412 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106379 aagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 106438 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 106439 tcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 106497 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106498 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 106557 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106558 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 106617 Query: 241 agcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctanatggctaaagtccagt 299 ||||| ||||||||||||||||| | || ||| |||||||| ||||| |||||||||| Sbjct: 106618 agcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagt 106677 Query: 300 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106678 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 106737 Query: 360 tgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106738 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 106789
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 662 bits (334), Expect = 0.0 Identities = 394/412 (95%), Gaps = 2/412 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135507 aagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 135448 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 135447 tcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 135389 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135388 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 135329 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135328 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 135269 Query: 241 agcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctanatggctaaagtccagt 299 ||||| ||||||||||||||||| | ||| ||| |||||||| ||||| |||||||||| Sbjct: 135268 agcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagt 135209 Query: 300 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 359 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 135208 agccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccg 135149 Query: 360 tgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135148 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 135097 Score = 662 bits (334), Expect = 0.0 Identities = 394/412 (95%), Gaps = 2/412 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105555 aagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 105614 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 105615 tcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 105673 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105674 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 105733 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105734 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 105793 Query: 241 agcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctanatggctaaagtccagt 299 ||||| ||||||||||||||||| | ||| ||| |||||||| ||||| |||||||||| Sbjct: 105794 agcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagt 105853 Query: 300 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 359 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 105854 agccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccg 105913 Query: 360 tgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 105914 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 105965
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 660 bits (333), Expect = 0.0 Identities = 392/411 (95%), Gaps = 1/411 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 139453 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagat 139394 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||||||||||| |||||| ||||||||||||| |||| |||||||||||| Sbjct: 139393 tcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcagacaagagacaacc 139335 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 139334 tggcgaactgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtagta 139275 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 139274 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataaa 139215 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 ||||| |||||||||||||||||||| ||||||| |||||| ||||| | ||||||||| Sbjct: 139214 agcgtcgtgctgctaggcgaagcggtgaagtgccgaaccctagatggcgatagtccagta 139155 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 139154 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 139095 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 139094 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 139044 Score = 660 bits (333), Expect = 0.0 Identities = 392/411 (95%), Gaps = 1/411 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 109644 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagat 109703 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||||||||||| |||||| ||||||||||||| |||| |||||||||||| Sbjct: 109704 tcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcagacaagagacaacc 109762 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 109763 tggcgaactgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtagta 109822 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 109823 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataaa 109882 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 ||||| |||||||||||||||||||| ||||||| |||||| ||||| | ||||||||| Sbjct: 109883 agcgtcgtgctgctaggcgaagcggtgaagtgccgaaccctagatggcgatagtccagta 109942 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 109943 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 110002 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 110003 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 110053
>gb|AF497435.1| Gossypium hirsutum clone T1F05 unknown chloroplast sequence Length = 640 Score = 660 bits (333), Expect = 0.0 Identities = 392/411 (95%), Gaps = 1/411 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 100 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagat 159 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||||||||||| |||||| ||||||||||||| |||| |||||||||||| Sbjct: 160 tcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcagacaagagacaacc 218 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 219 tggcgaactgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtagta 278 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 279 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataaa 338 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 ||||| |||||||||||||||||||| ||||||| |||||| ||||| | ||||||||| Sbjct: 339 agcgtcgtgctgctaggcgaagcggtgaagtgccgaaccctagatggcgatagtccagta 398 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 399 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 458 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 509
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 656 bits (331), Expect = 0.0 Identities = 381/397 (95%), Gaps = 1/397 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 48 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagat 107 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||| Sbjct: 108 tcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacc 166 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 167 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 226 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 227 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 286 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 ||||| |||||||||||||||||||| || | | |||||||| ||||| | ||||||||| Sbjct: 287 agcgtcgtgctgctaggcgaagcggtggaatactgcaccctagatggcgatagtccagta 346 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 347 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 406 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatact 397 ||||||||| ||||||||||||||||||||||||||| Sbjct: 407 gtgaatcagcaaggaccaccttgcaaggctaaatact 443
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 654 bits (330), Expect = 0.0 Identities = 393/412 (95%), Gaps = 2/412 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 135978 aagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggggat 135919 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 135918 tcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 135860 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135859 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 135800 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135799 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 135740 Query: 241 agcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctanatggctaaagtccagt 299 ||||| ||||||||||||||||| | || ||| |||||||| ||||| |||||||||| Sbjct: 135739 agcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagt 135680 Query: 300 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135679 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 135620 Query: 360 tgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135619 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 135568 Score = 654 bits (330), Expect = 0.0 Identities = 393/412 (95%), Gaps = 2/412 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 106160 aagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggggat 106219 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 106220 tcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 106278 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106279 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 106338 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106339 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 106398 Query: 241 agcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctanatggctaaagtccagt 299 ||||| ||||||||||||||||| | || ||| |||||||| ||||| |||||||||| Sbjct: 106399 agcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagt 106458 Query: 300 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106459 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 106518 Query: 360 tgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106519 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 106570
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 652 bits (329), Expect = 0.0 Identities = 391/411 (95%), Gaps = 1/411 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 ||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 131740 aagggcgtattaatcgacgaaatgcttcggggagttgaaaataagcagagatccggagat 131681 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||||||||||| |||| | ||||||||||||| ||||||||||||||||| Sbjct: 131680 tcccgaataggtcaacctttcgaacttc-tgctgaatccatgggcaggcaagagacaacc 131622 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131621 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 131562 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131561 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 131502 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 ||||| ||||||||||||||| | || |||||| | |||||| |||| ||||||||||| Sbjct: 131501 agcgtcgtgctgctaggcgaatcagtggagtgcggaaccctagatggtgaaagtccagta 131442 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131441 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 131382 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 131381 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 131331 Score = 652 bits (329), Expect = 0.0 Identities = 391/411 (95%), Gaps = 1/411 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 ||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 101705 aagggcgtattaatcgacgaaatgcttcggggagttgaaaataagcagagatccggagat 101764 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||||||||||| |||| | ||||||||||||| ||||||||||||||||| Sbjct: 101765 tcccgaataggtcaacctttcgaacttc-tgctgaatccatgggcaggcaagagacaacc 101823 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101824 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 101883 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101884 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 101943 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 ||||| ||||||||||||||| | || |||||| | |||||| |||| ||||||||||| Sbjct: 101944 agcgtcgtgctgctaggcgaatcagtggagtgcggaaccctagatggtgaaagtccagta 102003 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102004 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 102063 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 102064 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 102114
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 648 bits (327), Expect = 0.0 Identities = 390/409 (95%), Gaps = 2/409 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 139662 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagat 139603 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 139602 tcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 139544 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139543 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 139484 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139483 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 139424 Query: 241 agcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctanatggctaaagtccagt 299 ||||| ||||||||||||||||| || || ||| |||||||| |||| | |||||||| Sbjct: 139423 agcgtcgtgctgctaggcgaagcagtgcgaatgctgcaccctagatggtgagagtccagt 139364 Query: 300 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 359 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 139363 agccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccg 139304 Query: 360 tgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgacc 408 |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 139303 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacc 139255 Score = 648 bits (327), Expect = 0.0 Identities = 390/409 (95%), Gaps = 2/409 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 109637 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagat 109696 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 109697 tcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 109755 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109756 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 109815 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109816 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 109875 Query: 241 agcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctanatggctaaagtccagt 299 ||||| ||||||||||||||||| || || ||| |||||||| |||| | |||||||| Sbjct: 109876 agcgtcgtgctgctaggcgaagcagtgcgaatgctgcaccctagatggtgagagtccagt 109935 Query: 300 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 359 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 109936 agccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccg 109995 Query: 360 tgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgacc 408 |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 109996 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacc 110044
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 646 bits (326), Expect = 0.0 Identities = 393/412 (95%), Gaps = 3/412 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 26 aagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 85 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 86 tcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 144 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 204 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 205 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 264 Query: 241 agcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctanatggctaaagtccagt 299 ||||| ||||||||||||||||| | ||| ||| |||||| | ||||| |||||||||| Sbjct: 265 agcgtcgtgctgctaggcgaagcagcctgaatgctgcaccc-atatggcgaaagtccagt 323 Query: 300 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 359 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 324 agccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccg 383 Query: 360 tgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 384 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 435
>gb|DQ166037.1| Passiflora edulis 23S ribosomal RNA gene, partial sequence; chloroplast Length = 467 Score = 644 bits (325), Expect = 0.0 Identities = 390/411 (94%), Gaps = 1/411 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 28 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagat 87 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||||||||||| ||||||| ||| ||||||||| ||||||||||||||||| Sbjct: 88 tcccgaataggtcaacctttcaaactgc-tgccgaatccatgggcaggcaagagacaacc 146 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 147 tggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccgtagta 206 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 207 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 266 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 ||||| ||||||||||||||||||| || |||||||||| |||| ||||||||| Sbjct: 267 agcgtcgtgctgctaggcgaagcggccgaacaccgcaccctagatggtgggagtccagta 326 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 327 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 386 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 387 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 437
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 644 bits (325), Expect = 0.0 Identities = 390/411 (94%), Gaps = 1/411 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 4551 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccgaggat 4610 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||||||||||| |||||| |||||||| || ||||||||||||||||||| Sbjct: 4611 tcccgaataggtcaacctttcgaactgc-tgctgaattcacgagcaggcaagagacaacc 4669 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4670 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 4729 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4730 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 4789 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 ||||| ||||||||||||||||| || || || |||||||| |||| ||||||||||| Sbjct: 4790 agcgtcgtgctgctaggcgaagcagtcgaatgttgcaccctagatggtgaaagtccagta 4849 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| Sbjct: 4850 gccgaaagcatcactagcttatgctctgacccgagtaacatggggcacgtgaaatcccgt 4909 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4910 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 4960
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 644 bits (325), Expect = 0.0 Identities = 390/411 (94%), Gaps = 1/411 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 4551 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccgaggat 4610 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||||||||||| |||||| |||||||| || ||||||||||||||||||| Sbjct: 4611 tcccgaataggtcaacctttcgaactgc-tgctgaattcacgagcaggcaagagacaacc 4669 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4670 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 4729 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4730 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 4789 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 ||||| ||||||||||||||||| || || || |||||||| |||| ||||||||||| Sbjct: 4790 agcgtcgtgctgctaggcgaagcagtcgaatgttgcaccctagatggtgaaagtccagta 4849 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| Sbjct: 4850 gccgaaagcatcactagcttatgctctgacccgagtaacatggggcacgtgaaatcccgt 4909 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4910 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 4960
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 636 bits (321), Expect = e-179 Identities = 389/411 (94%), Gaps = 1/411 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 4282 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccgaggat 4341 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||||||||||| |||||| |||||||| || ||||||||||||||||||| Sbjct: 4342 tcccgaataggtcaacctttcgaactgc-tgctgaattcacgagcaggcaagagacaacc 4400 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4401 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 4460 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4461 gcggcgagcgaaatgggaacagcctaaaccgtgaaaacggggttgtgggagagcaataca 4520 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 ||||| ||| ||||||||||||| | || || |||||||| |||| ||||||||||| Sbjct: 4521 agcgtcgtgttgctaggcgaagcaatcgaatgttgcaccctagatggtgaaagtccagta 4580 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4581 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 4640 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4641 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 4691
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 636 bits (321), Expect = e-179 Identities = 389/411 (94%), Gaps = 1/411 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 23643 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccgaggat 23584 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||||||||||| |||||| |||||||| || ||||||||||||||||||| Sbjct: 23583 tcccgaataggtcaacctttcgaactgc-tgctgaattcacgagcaggcaagagacaacc 23525 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23524 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 23465 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 23464 gcggcgagcgaaatgggaacagcctaaaccgtgaaaacggggttgtgggagagcaataca 23405 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 ||||| ||| ||||||||||||| | || || |||||||| |||| ||||||||||| Sbjct: 23404 agcgtcgtgttgctaggcgaagcaatcgaatgttgcaccctagatggtgaaagtccagta 23345 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23344 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 23285 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 23284 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 23234
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 636 bits (321), Expect = e-179 Identities = 389/411 (94%), Gaps = 1/411 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 52 aagggcgtagcaagcgacgaaatgcttcggggagctgaaaataagcatagatccggagat 111 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||| ||| |||||||| |||||| |||||||| ||| ||||||||||||||||| Sbjct: 112 tcccgaatgggttaaccttttgaactgc-tgctgaattcataggcaggcaagagacaacc 170 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 171 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 230 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 231 gcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaatata 290 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 || |||||| ||||||||||||||||||||| |||||||| | |||| | ||||||||| Sbjct: 291 agtgttgtgttgctaggcgaagcggttgagtcccgcaccccagatggtgagagtccagta 350 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 351 gccgaaagcatcactagcttacgctctaacccgagtagcatggggcacgtggaatcccgt 410 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 411 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 461
>dbj|AK060204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-H12, full insert sequence Length = 1872 Score = 632 bits (319), Expect = e-178 Identities = 326/329 (99%) Strand = Plus / Plus Query: 83 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 60 Query: 143 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 120 Query: 203 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 180 Query: 263 cggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcactagcttat 322 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 181 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttac 240 Query: 323 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccacctt 382 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 241 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 300 Query: 383 gcaaggctaaatactcctgggtgaccgat 411 ||||||||||||||||||||||||||||| Sbjct: 301 gcaaggctaaatactcctgggtgaccgat 329
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 628 bits (317), Expect = e-177 Identities = 388/411 (94%), Gaps = 1/411 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 ||||||||| || |||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 59 aagggcgtattaatcgacgaaatgcttcggggagttgaaaataagccgagatccggagat 118 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| |||||| |||||||| |||| | ||||||||||||| ||||||||||||||||| Sbjct: 119 tcccgaatagggcaacctttcgaacttc-tgctgaatccatgggcaggcaagagacaacc 177 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 178 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 237 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 238 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 297 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 ||||| ||||||||||||||| | || |||||| | |||||| |||| ||||||||||| Sbjct: 298 agcgtcgtgctgctaggcgaatctgtggagtgcggtaccctagatggtgaaagtccagta 357 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 358 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 417 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 418 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 468
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 628 bits (317), Expect = e-177 Identities = 388/411 (94%), Gaps = 1/411 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 ||||||||| || |||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 59 aagggcgtattaatcgacgaaatgcttcggggagttgaaaataagccgagatccggagat 118 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| |||||| |||||||| |||| | ||||||||||||| ||||||||||||||||| Sbjct: 119 tcccgaatagggcaacctttcgaacttc-tgctgaatccatgggcaggcaagagacaacc 177 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 178 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 237 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 238 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 297 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 ||||| ||||||||||||||| | || |||||| | |||||| |||| ||||||||||| Sbjct: 298 agcgtcgtgctgctaggcgaatctgtggagtgcggtaccctagatggtgaaagtccagta 357 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 358 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 417 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 418 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 468
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 628 bits (317), Expect = e-177 Identities = 388/411 (94%), Gaps = 1/411 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 ||||||||| || |||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 547 aagggcgtattaatcgacgaaatgcttcggggagttgaaaataagccgagatccggagat 606 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| |||||| |||||||| |||| | ||||||||||||| ||||||||||||||||| Sbjct: 607 tcccgaatagggcaacctttcgaacttc-tgctgaatccatgggcaggcaagagacaacc 665 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 666 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 725 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 726 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 785 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 ||||| ||||||||||||||| | || |||||| | |||||| |||| ||||||||||| Sbjct: 786 agcgtcgtgctgctaggcgaatctgtggagtgcggtaccctagatggtgaaagtccagta 845 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 846 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 905 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 906 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 956
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 622 bits (314), Expect = e-175 Identities = 389/412 (94%), Gaps = 2/412 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 142828 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgcagatccggagat 142769 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||| ||||||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 142768 tcccgaatgggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 142710 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142709 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 142650 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 142649 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagtcataca 142590 Query: 241 agcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctanatggctaaagtccagt 299 ||||| ||||||||||||||||| | | |||||| |||||||| |||| | |||||||| Sbjct: 142589 agcgtcgtgctgctaggcgaagcagctggagtgctgcaccctagatggtgagagtccagt 142530 Query: 300 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 359 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 142529 agccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccg 142470 Query: 360 tgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 |||||||||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 142469 tgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgat 142418 Score = 622 bits (314), Expect = e-175 Identities = 389/412 (94%), Gaps = 2/412 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 110500 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgcagatccggagat 110559 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||| ||||||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 110560 tcccgaatgggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 110618 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110619 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 110678 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 110679 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagtcataca 110738 Query: 241 agcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctanatggctaaagtccagt 299 ||||| ||||||||||||||||| | | |||||| |||||||| |||| | |||||||| Sbjct: 110739 agcgtcgtgctgctaggcgaagcagctggagtgctgcaccctagatggtgagagtccagt 110798 Query: 300 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 359 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 110799 agccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccg 110858 Query: 360 tgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 |||||||||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 110859 tgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgat 110910
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 617 bits (311), Expect = e-173 Identities = 391/413 (94%), Gaps = 4/413 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 151 aagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 210 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 211 tcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 269 Query: 121 tggcgaactgaaacatcttagt-agccagaggaaaagaaagcaaaagcgattcccgtagt 179 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 270 tggcgaactgaaacatcttagtgagccagaggaaaagaaagcaaaagcgattcccgtagt 329 Query: 180 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatac 239 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 330 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggg-ttgtgggagagcaatac 388 Query: 240 aagcgttgtgctgctaggcgaag-cggttgagtgccgcaccctanatggctaaagtccag 298 |||||| |||||||||||||||| || || ||| |||||||| ||||| ||||||||| Sbjct: 389 aagcgtcgtgctgctaggcgaagacgcccgaatgctgcaccctagatggcgaaagtccag 448 Query: 299 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 449 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 508 Query: 359 gtgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 509 gtgtgaatcgacaaggaccaccttgcaaggctaaatactcctgggtgaccgat 561
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 605 bits (305), Expect = e-170 Identities = 389/414 (93%), Gaps = 4/414 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||| Sbjct: 131820 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggggat 131761 Query: 61 tcccaa-ataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 119 |||| | |||||||||||||| |||||| ||||||||||| | |||||||||||||||| Sbjct: 131760 tcccgatataggtcaacctttcgaactgc-tgctgaatccacgggcaggcaagagacaac 131702 Query: 120 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 179 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131701 ctggtgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 131642 Query: 180 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatac 239 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 131641 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagctatac 131582 Query: 240 aagcgttgtgctgctaggcgaagcggttgag--tgccgcaccctanatggctaaagtcca 297 ||| || ||||||||||||||||| | ||| ||| |||||||| ||||| | |||||| Sbjct: 131581 aagtgtcgtgctgctaggcgaagcagcagagaatgctgcaccctagatggcgagagtcca 131522 Query: 298 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 357 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 131521 gtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcc 131462 Query: 358 cgtgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 131461 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 131408 Score = 605 bits (305), Expect = e-170 Identities = 389/414 (93%), Gaps = 4/414 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||| Sbjct: 103574 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggggat 103633 Query: 61 tcccaa-ataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 119 |||| | |||||||||||||| |||||| ||||||||||| | |||||||||||||||| Sbjct: 103634 tcccgatataggtcaacctttcgaactgc-tgctgaatccacgggcaggcaagagacaac 103692 Query: 120 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 179 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103693 ctggtgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 103752 Query: 180 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatac 239 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 103753 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagctatac 103812 Query: 240 aagcgttgtgctgctaggcgaagcggttgag--tgccgcaccctanatggctaaagtcca 297 ||| || ||||||||||||||||| | ||| ||| |||||||| ||||| | |||||| Sbjct: 103813 aagtgtcgtgctgctaggcgaagcagcagagaatgctgcaccctagatggcgagagtcca 103872 Query: 298 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 357 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 103873 gtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcc 103932 Query: 358 cgtgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 103933 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 103986
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 603 bits (304), Expect = e-169 Identities = 378/398 (94%), Gaps = 4/398 (1%) Strand = Plus / Plus Query: 17 acgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaac 76 |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| Sbjct: 1833 acgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaac 1892 Query: 77 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 136 |||| |||||| ||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 1893 ctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaccat 1951 Query: 137 cttagtagccagaggaaaagaaagcaaaag-cgattcccgtagtagcggcgagcgaaatg 195 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1952 cttagtagccagaggaaaagaaagcaaaaggcgattcccgtagtagcggcgagcgaaatg 2011 Query: 196 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagc-gttgtgctgct 254 |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct: 2012 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcggccgtgctgct 2071 Query: 255 aggcgaagc-ggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatca 313 ||||||||| | || ||| |||||||| ||||| |||||||||||||||||||||||| Sbjct: 2072 aggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 2131 Query: 314 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagnaag 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 2132 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 2191 Query: 374 gaccaccttgcaaggctaaatactcctgggtgaccgat 411 |||||||||||||||||||||||||||||||||||||| Sbjct: 2192 gaccaccttgcaaggctaaatactcctgggtgaccgat 2229
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 595 bits (300), Expect = e-167 Identities = 386/413 (93%), Gaps = 3/413 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 86313 aagggcgtggtaagcgacgaaatgcttcggggagttgaaaatgagcatagatccggagat 86372 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||| |||| ||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 86373 tcccgaataggttaacccttttaactgc-tgctgaatccatgggcaggcaagagacaacc 86431 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 86432 tggcgaactgaaacatcttagtagccagaggaatagaaagcaaaagcgattcccgtagta 86491 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag--caata 238 | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 86492 gtggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcccaata 86551 Query: 239 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccag 298 |||| |||||||||||||||||||||||||| | |||||||| |||| | ||||||| Sbjct: 86552 taagctctgtgctgctaggcgaagcggttgagtcctgcaccctagatggtgagagtccag 86611 Query: 299 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 358 ||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 86612 tagccgaaagcatcattggcttacgctctaacccgagtagcatggggcacgtggaatccc 86671 Query: 359 gtgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 86672 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 86724
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 595 bits (300), Expect = e-167 Identities = 386/413 (93%), Gaps = 3/413 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 88399 aagggcgtggtaagcgacgaaatgcttcggggagttgaaaattagcatagatccggagat 88458 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||| |||||||| ||||| ||||||||||||| ||||||||||||||||| Sbjct: 88459 tcccgaataggttaacctttttcactgc-tgctgaatccatgggcaggcaagagacaacc 88517 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 88518 tggtgaactgaaacatcttagtagccagaggaatagaaagcaaaagcgattcccgtagta 88577 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag--caata 238 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 88578 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcacaata 88637 Query: 239 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccag 298 |||| |||||||||||||||||||||||||| | |||||||| |||| | ||||||| Sbjct: 88638 taagctctgtgctgctaggcgaagcggttgagtcctgcaccctagatggtgagagtccag 88697 Query: 299 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 358 ||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 88698 tagccgaaagcatcattggcttacgctctaacccgagtagcatggggcacgtggaatccc 88757 Query: 359 gtgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 88758 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 88810
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 587 bits (296), Expect = e-164 Identities = 374/398 (93%), Gaps = 2/398 (0%) Strand = Plus / Minus Query: 15 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 74 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 52621 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggca 52562 Query: 75 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 134 ||||||| |||||| ||||||||||||| |||| ||||||| |||||||||||||||||| Sbjct: 52561 accttttgaactgc-tgctgaatccatgggcagacaagagataacctggcgaactgaaac 52503 Query: 135 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 194 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 52502 atcttagtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaat 52443 Query: 195 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 254 ||||||||||||||||| |||||||||||||||||||||||||| ||| || |||||||| Sbjct: 52442 gggagcagcctaaaccgcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgct 52383 Query: 255 aggcgaa-gcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatca 313 ||||||| | | |||| ||| |||||||| ||||| |||||||||||||||||||||||| Sbjct: 52382 aggcgaacgagcttgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 52323 Query: 314 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagnaag 373 |||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||| Sbjct: 52322 ttagcttgtgctctgacccgagtagcatgggacacgtggaatcccgtgtgaatcagcaag 52263 Query: 374 gaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||||||||||||||||||||||||| |||||| Sbjct: 52262 gaccaccttgcaaggctaaatactcctgggtaaccgat 52225 Score = 587 bits (296), Expect = e-164 Identities = 374/398 (93%), Gaps = 2/398 (0%) Strand = Plus / Plus Query: 15 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 74 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 37207 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggca 37266 Query: 75 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 134 ||||||| |||||| ||||||||||||| |||| ||||||| |||||||||||||||||| Sbjct: 37267 accttttgaactgc-tgctgaatccatgggcagacaagagataacctggcgaactgaaac 37325 Query: 135 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 194 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 37326 atcttagtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaat 37385 Query: 195 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 254 ||||||||||||||||| |||||||||||||||||||||||||| ||| || |||||||| Sbjct: 37386 gggagcagcctaaaccgcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgct 37445 Query: 255 aggcgaa-gcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatca 313 ||||||| | | |||| ||| |||||||| ||||| |||||||||||||||||||||||| Sbjct: 37446 aggcgaacgagcttgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 37505 Query: 314 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagnaag 373 |||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||| Sbjct: 37506 ttagcttgtgctctgacccgagtagcatgggacacgtggaatcccgtgtgaatcagcaag 37565 Query: 374 gaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||||||||||||||||||||||||| |||||| Sbjct: 37566 gaccaccttgcaaggctaaatactcctgggtaaccgat 37603
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 587 bits (296), Expect = e-164 Identities = 374/398 (93%), Gaps = 2/398 (0%) Strand = Plus / Plus Query: 15 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 74 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 4135 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggca 4194 Query: 75 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 134 ||||||| |||||| ||||||||||||| |||| ||||||| |||||||||||||||||| Sbjct: 4195 accttttgaactgc-tgctgaatccatgggcagacaagagataacctggcgaactgaaac 4253 Query: 135 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 194 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 4254 atcttagtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaat 4313 Query: 195 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 254 ||||||||||||||||| |||||||||||||||||||||||||| ||| || |||||||| Sbjct: 4314 gggagcagcctaaaccgcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgct 4373 Query: 255 aggcgaa-gcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatca 313 ||||||| | | |||| ||| |||||||| ||||| |||||||||||||||||||||||| Sbjct: 4374 aggcgaacgagcttgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 4433 Query: 314 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagnaag 373 |||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||| Sbjct: 4434 ttagcttgtgctctgacccgagtagcatgggacacgtggaatcccgtgtgaatcagcaag 4493 Query: 374 gaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||||||||||||||||||||||||| |||||| Sbjct: 4494 gaccaccttgcaaggctaaatactcctgggtaaccgat 4531
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 579 bits (292), Expect = e-162 Identities = 386/417 (92%), Gaps = 7/417 (1%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 ||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||||| Sbjct: 128395 aagggcgtagcaatcgacgaaatgcttcggggagctgaaaacaagcatagatccggagat 128336 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||| |||||||| |||||| |||||||| ||| ||||||||||||||||| Sbjct: 128335 tcccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaagagacaacc 128277 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| Sbjct: 128276 tggcgaactgaaacatcttagtagccagaggaaaggaaagcaaacgcgattcccgtagta 128217 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc------ 234 |||||||||||| |||||| ||||||||||||||||||||||||||||| |||| Sbjct: 128216 gcggcgagcgaagtgggagtagcctaaaccgtgaaaacggggttgtgggggagcgataca 128157 Query: 235 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagt 294 ||||||||| ||||||||||||||||||||||||||| |||||||||| ||||| | ||| Sbjct: 128156 aatacaagctttgtgctgctaggcgaagcggttgagtcccgcaccctagatggcaagagt 128097 Query: 295 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 354 ||||||||||||||||||||||||| | ||||| |||| ||||||||||||||||||||| Sbjct: 128096 ccagtagccgaaagcatcactagctcacgctctaacccaagtagcatggggcacgtggaa 128037 Query: 355 tcccgtgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 128036 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 127980 Score = 579 bits (292), Expect = e-162 Identities = 386/417 (92%), Gaps = 7/417 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 ||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||||| Sbjct: 95052 aagggcgtagcaatcgacgaaatgcttcggggagctgaaaacaagcatagatccggagat 95111 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||| |||||||| |||||| |||||||| ||| ||||||||||||||||| Sbjct: 95112 tcccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaagagacaacc 95170 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| Sbjct: 95171 tggcgaactgaaacatcttagtagccagaggaaaggaaagcaaacgcgattcccgtagta 95230 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc------ 234 |||||||||||| |||||| ||||||||||||||||||||||||||||| |||| Sbjct: 95231 gcggcgagcgaagtgggagtagcctaaaccgtgaaaacggggttgtgggggagcgataca 95290 Query: 235 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagt 294 ||||||||| ||||||||||||||||||||||||||| |||||||||| ||||| | ||| Sbjct: 95291 aatacaagctttgtgctgctaggcgaagcggttgagtcccgcaccctagatggcaagagt 95350 Query: 295 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 354 ||||||||||||||||||||||||| | ||||| |||| ||||||||||||||||||||| Sbjct: 95351 ccagtagccgaaagcatcactagctcacgctctaacccaagtagcatggggcacgtggaa 95410 Query: 355 tcccgtgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 95411 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 95467
>emb|AJ538655.1|NTA538655 Nicotiana tabacum cDNA-AFLP-fragment BC34-M2-001 Length = 512 Score = 565 bits (285), Expect = e-158 Identities = 342/359 (95%), Gaps = 2/359 (0%) Strand = Plus / Minus Query: 54 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 113 ||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 512 cggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 454 Query: 114 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 173 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 394 Query: 174 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 233 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 393 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 334 Query: 234 caatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctanatggctaaa 292 |||||||||||| ||||||||||||||||| | || ||| |||||||| ||||| ||| Sbjct: 333 caatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaa 274 Query: 293 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 352 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 273 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 214 Query: 353 aatcccgtgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 213 aatcccgtgtgaatcagcaaggaccgccttgcaaggctaaatactcctgggtgaccgat 155
>dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast genes for tRNA-Ile(GAU), tRNA-Ala(UGC), 23S rRNA, partial sequence Length = 2767 Score = 559 bits (282), Expect = e-156 Identities = 381/412 (92%), Gaps = 2/412 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 2095 aagggcgtagcaagcgacgaaatgcttcggggagctgaaaataagcatagatccggagat 2154 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||| |||||||| |||||| |||||||| ||| ||||||||||||||||| Sbjct: 2155 tcccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaagagacaacc 2213 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 2214 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccatagta 2273 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||| |||||||||||||||||||||||||||||||||||| | | Sbjct: 2274 gcggcgagcgaaatgggactagcctaaaccgtgaaaacggggttgtgggagagcaaaata 2333 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 || ||||| ||||||||||||| ||||||| | |||||||| |||| | ||||||||| Sbjct: 2334 agtgttgttttgctaggcgaagcagttgagtcctgcaccctagatggtgagagtccagta 2393 Query: 301 gccgaaagcatcacta-gcttatgctctgacccgagtagcatggggcacgtggaatcccg 359 ||||||||||| || | || ||||||| ||||||||||||||||||||||||||||||| Sbjct: 2394 gccgaaagcataacaacactcatgctctaacccgagtagcatggggcacgtggaatcccg 2453 Query: 360 tgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 |||||||||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 2454 tgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgat 2505
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 559 bits (282), Expect = e-156 Identities = 381/412 (92%), Gaps = 2/412 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 118098 aagggcgtagcaagcgacgaaatgcttcggggagctgaaaataagcatagatccggagat 118039 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||| |||||||| |||||| |||||||| ||| ||||||||||||||||| Sbjct: 118038 tcccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaagagacaacc 117980 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 117979 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccatagta 117920 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||| |||||||||||||||||||||||||||||||||||| | | Sbjct: 117919 gcggcgagcgaaatgggactagcctaaaccgtgaaaacggggttgtgggagagcaaaata 117860 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 || ||||| ||||||||||||| ||||||| | |||||||| |||| | ||||||||| Sbjct: 117859 agtgttgttttgctaggcgaagcagttgagtcctgcaccctagatggtgagagtccagta 117800 Query: 301 gccgaaagcatcacta-gcttatgctctgacccgagtagcatggggcacgtggaatcccg 359 ||||||||||| || | || ||||||| ||||||||||||||||||||||||||||||| Sbjct: 117799 gccgaaagcataacaacactcatgctctaacccgagtagcatggggcacgtggaatcccg 117740 Query: 360 tgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 |||||||||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 117739 tgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgat 117688 Score = 559 bits (282), Expect = e-156 Identities = 381/412 (92%), Gaps = 2/412 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 90004 aagggcgtagcaagcgacgaaatgcttcggggagctgaaaataagcatagatccggagat 90063 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||| |||||||| |||||| |||||||| ||| ||||||||||||||||| Sbjct: 90064 tcccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaagagacaacc 90122 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 90123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccatagta 90182 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||| |||||||||||||||||||||||||||||||||||| | | Sbjct: 90183 gcggcgagcgaaatgggactagcctaaaccgtgaaaacggggttgtgggagagcaaaata 90242 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 || ||||| ||||||||||||| ||||||| | |||||||| |||| | ||||||||| Sbjct: 90243 agtgttgttttgctaggcgaagcagttgagtcctgcaccctagatggtgagagtccagta 90302 Query: 301 gccgaaagcatcacta-gcttatgctctgacccgagtagcatggggcacgtggaatcccg 359 ||||||||||| || | || ||||||| ||||||||||||||||||||||||||||||| Sbjct: 90303 gccgaaagcataacaacactcatgctctaacccgagtagcatggggcacgtggaatcccg 90362 Query: 360 tgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 |||||||||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 90363 tgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgat 90414
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 557 bits (281), Expect = e-155 Identities = 380/411 (92%), Gaps = 2/411 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| Sbjct: 116158 aagggcgtagcaagcgacgaaatgcttcggggagctgaaaataagtatagatccggagat 116099 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||| ||||||| ||||||| |||||||| ||| |||| |||||||||||| Sbjct: 116098 tcccgaataggttaacctttgaaactgc-tgctgaattcataggcagacaagagacaacc 116040 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 116039 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattctcgtagta 115980 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||| |||||||||||||||||||||| ||||||| |||| | | | Sbjct: 115979 gcggcgagcgaaatgggaacagcctaaaccgtgaaaacggg-ttgtgggggagctaaata 115921 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 || |||||| ||||||||||||| ||||||| | |||||||| |||| ||||||||||| Sbjct: 115920 agtgttgtgttgctaggcgaagcagttgagtcctgcaccctagatggtgaaagtccagta 115861 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 115860 accgaaagcagcactagcttaggctctaacccgagtagcatggggcacgtggaatcccgt 115801 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 115800 gtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgat 115750 Score = 557 bits (281), Expect = e-155 Identities = 380/411 (92%), Gaps = 2/411 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| Sbjct: 85962 aagggcgtagcaagcgacgaaatgcttcggggagctgaaaataagtatagatccggagat 86021 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||| ||||||| ||||||| |||||||| ||| |||| |||||||||||| Sbjct: 86022 tcccgaataggttaacctttgaaactgc-tgctgaattcataggcagacaagagacaacc 86080 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 86081 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattctcgtagta 86140 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||| |||||||||||||||||||||| ||||||| |||| | | | Sbjct: 86141 gcggcgagcgaaatgggaacagcctaaaccgtgaaaacggg-ttgtgggggagctaaata 86199 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 || |||||| ||||||||||||| ||||||| | |||||||| |||| ||||||||||| Sbjct: 86200 agtgttgtgttgctaggcgaagcagttgagtcctgcaccctagatggtgaaagtccagta 86259 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 86260 accgaaagcagcactagcttaggctctaacccgagtagcatggggcacgtggaatcccgt 86319 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 86320 gtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgat 86370
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 557 bits (281), Expect = e-155 Identities = 379/411 (92%), Gaps = 1/411 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| Sbjct: 3941 aagggcgtagcaagcgacgaaatgcttcggggagctgaaaagaagcatagatccggagat 4000 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||| |||||||| |||||| |||||||| || || | |||||||||||| Sbjct: 4001 tcccgaataggttaaccttttgaactgc-tgctgaattcacaagtaagcaagagacaact 4059 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 4060 tggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccgtagta 4119 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 4120 gcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaatata 4179 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 ||||||||||||||||| ||||| ||||||| | |||||| | |||| | ||||||||| Sbjct: 4180 agcgttgtgctgctaggtgaagcagttgagttctgcaccccagatggtgagagtccagta 4239 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 |||||||||| |||| |||| || | |||||||||||||||||||||||||||||||| Sbjct: 4240 gccgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtggaatcccgt 4299 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4300 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 4350
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 557 bits (281), Expect = e-155 Identities = 379/411 (92%), Gaps = 1/411 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| Sbjct: 52 aagggcgtagcaagcgacgaaatgcttcggggagctgaaaataagcatggatccggagat 111 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||| |||||||| |||||| |||||||| ||| |||| |||||||||||| Sbjct: 112 tcccgaataggttaaccttttgaactgc-tgctgaattcataggcagacaagagacaacc 170 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 171 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccatagta 230 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| | Sbjct: 231 gcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggggagcaaagta 290 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 |||||||| |||||||||||| ||||| | | ||||| || |||| | ||||||||| Sbjct: 291 ggcgttgtgtcgctaggcgaagcagttgaatcctgcaccatagatggtgagagtccagta 350 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct: 351 gccgaaagcatcactagtttatgctctaacccgagtagcatggggcacgtggaatcccgt 410 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 411 gtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgat 461
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 557 bits (281), Expect = e-155 Identities = 379/411 (92%), Gaps = 1/411 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| Sbjct: 51 aagggcgtagcaagcgacgaaatgcttcggggagctgaaaagaagcatagatccggagat 110 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||| |||||||| |||||| |||||||| || || | |||||||||||| Sbjct: 111 tcccgaataggttaaccttttgaactgc-tgctgaattcacaagtaagcaagagacaact 169 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 170 tggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccgtagta 229 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 230 gcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaatata 289 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 ||||||||||||||||| ||||| ||||||| | |||||| | |||| | ||||||||| Sbjct: 290 agcgttgtgctgctaggtgaagcagttgagttctgcaccccagatggtgagagtccagta 349 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 |||||||||| |||| |||| || | |||||||||||||||||||||||||||||||| Sbjct: 350 gccgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtggaatcccgt 409 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 410 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 460
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 557 bits (281), Expect = e-155 Identities = 379/411 (92%), Gaps = 1/411 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| Sbjct: 151194 aagggcgtagcaagcgacgaaatgcttcggggagctgaaaagaagcatagatccggagat 151135 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||| |||||||| |||||| |||||||| || || | |||||||||||| Sbjct: 151134 tcccgaataggttaaccttttgaactgc-tgctgaattcacaagtaagcaagagacaact 151076 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 151075 tggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccgtagta 151016 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 151015 gcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaatata 150956 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 ||||||||||||||||| ||||| ||||||| | |||||| | |||| | ||||||||| Sbjct: 150955 agcgttgtgctgctaggtgaagcagttgagttctgcaccccagatggtgagagtccagta 150896 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 |||||||||| |||| |||| || | |||||||||||||||||||||||||||||||| Sbjct: 150895 gccgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtggaatcccgt 150836 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 150835 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 150785 Score = 557 bits (281), Expect = e-155 Identities = 379/411 (92%), Gaps = 1/411 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| Sbjct: 117472 aagggcgtagcaagcgacgaaatgcttcggggagctgaaaagaagcatagatccggagat 117531 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||| |||||||| |||||| |||||||| || || | |||||||||||| Sbjct: 117532 tcccgaataggttaaccttttgaactgc-tgctgaattcacaagtaagcaagagacaact 117590 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 117591 tggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccgtagta 117650 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 117651 gcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaatata 117710 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 ||||||||||||||||| ||||| ||||||| | |||||| | |||| | ||||||||| Sbjct: 117711 agcgttgtgctgctaggtgaagcagttgagttctgcaccccagatggtgagagtccagta 117770 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 |||||||||| |||| |||| || | |||||||||||||||||||||||||||||||| Sbjct: 117771 gccgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtggaatcccgt 117830 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 117831 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 117881
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 557 bits (281), Expect = e-155 Identities = 379/411 (92%), Gaps = 1/411 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| Sbjct: 51 aagggcgtagcaagcgacgaaatgcttcggggagctgaaaagaagcatagatccggagat 110 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||| |||||||| |||||| |||||||| || || | |||||||||||| Sbjct: 111 tcccgaataggttaaccttttgaactgc-tgctgaattcacaagtaagcaagagacaact 169 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 170 tggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccgtagta 229 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 230 gcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaatata 289 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 ||||||||||||||||| ||||| ||||||| | |||||| | |||| | ||||||||| Sbjct: 290 agcgttgtgctgctaggtgaagcagttgagttctgcaccccagatggtgagagtccagta 349 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 |||||||||| |||| |||| || | |||||||||||||||||||||||||||||||| Sbjct: 350 gccgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtggaatcccgt 409 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 410 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 460
>gb|DQ160037.1| Taraxacum officinale To27-3 mRNA, partial sequence Length = 336 Score = 551 bits (278), Expect = e-154 Identities = 319/332 (96%), Gaps = 1/332 (0%) Strand = Plus / Minus Query: 74 aaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaa 133 ||||||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 335 aacctttcaaactgc-tgctgaatccatgggcaggcaggagacaacctggcgaactgaaa 277 Query: 134 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 276 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 217 Query: 194 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 253 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 216 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgc 157 Query: 254 taggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatca 313 |||||||||| || || ||| |||||||| ||||| |||||||||||||||||||||||| Sbjct: 156 taggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 97 Query: 314 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagnaag 373 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 96 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 37 Query: 374 gaccaccttgcaaggctaaatactcctgggtg 405 |||||||||||||||||||||||||||||||| Sbjct: 36 gaccaccttgcaaggctaaatactcctgggtg 5
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 551 bits (278), Expect = e-154 Identities = 380/412 (92%), Gaps = 2/412 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||| Sbjct: 146508 aagggcgtagcaagcgacgaaatgcttcggggagctgaaaatgagcatggatccggagat 146449 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||| |||||||| |||| | |||||||| ||| |||||| |||||||||| Sbjct: 146448 tcccgaataggttaaccttttgaactac-tgctgaattcataggcaggcgagagacaacc 146390 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 146389 tggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccgtagta 146330 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 146329 gcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaatata 146270 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 |||||| |||||||||||||||| ||||||| | | |||||| |||| | ||||||||| Sbjct: 146269 agcgttttgctgctaggcgaagcagttgagtcctgtaccctagatggtgagagtccagta 146210 Query: 301 gccgaaagcatcactagc-ttatgctctgacccgagtagcatggggcacgtggaatcccg 359 ||||||||||||||| || |||||||| ||||||||||||||||||||| |||||||| Sbjct: 146209 gccgaaagcatcactggctttatgctccaacccgagtagcatggggcacgcagaatcccg 146150 Query: 360 tgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 |||||||||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 146149 tgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgat 146098 Score = 551 bits (278), Expect = e-154 Identities = 380/412 (92%), Gaps = 2/412 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||| Sbjct: 111954 aagggcgtagcaagcgacgaaatgcttcggggagctgaaaatgagcatggatccggagat 112013 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||| |||||||| |||| | |||||||| ||| |||||| |||||||||| Sbjct: 112014 tcccgaataggttaaccttttgaactac-tgctgaattcataggcaggcgagagacaacc 112072 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 112073 tggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccgtagta 112132 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 112133 gcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaatata 112192 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 |||||| |||||||||||||||| ||||||| | | |||||| |||| | ||||||||| Sbjct: 112193 agcgttttgctgctaggcgaagcagttgagtcctgtaccctagatggtgagagtccagta 112252 Query: 301 gccgaaagcatcactagc-ttatgctctgacccgagtagcatggggcacgtggaatcccg 359 ||||||||||||||| || |||||||| ||||||||||||||||||||| |||||||| Sbjct: 112253 gccgaaagcatcactggctttatgctccaacccgagtagcatggggcacgcagaatcccg 112312 Query: 360 tgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 |||||||||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 112313 tgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgat 112364
>emb|AJ538560.1|NTA538560 Nicotiana tabacum cDNA-AFLP-fragment BC3-M22-001 Length = 501 Score = 551 bits (278), Expect = e-154 Identities = 313/324 (96%), Gaps = 1/324 (0%) Strand = Plus / Plus Query: 89 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 148 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 76 Query: 149 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 136 Query: 209 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggtt 267 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 137 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagccc 196 Query: 268 gagtgccgcaccctanatggctaaagtccagtagccgaaagcatcactagcttatgctct 327 || ||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 197 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctct 256 Query: 328 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaag 387 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 257 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 316 Query: 388 gctaaatactcctgggtgaccgat 411 |||||||||||||||||||||||| Sbjct: 317 gctaaatactcctgggtgaccgat 340
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 545 bits (275), Expect = e-152 Identities = 385/412 (93%), Gaps = 14/412 (3%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 682 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagat 623 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||||| ||| |||| |||||||||||||| |||||||||||||| | Sbjct: 622 tcccgaataggtca--ctt---gactg-ctgctgaatccatg-gcaggcaagagaca--c 572 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaa-gcaaaagcgattcccgtagt 179 | |||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 571 t-gcga--tga-acatcttagtagccagaggaaaagaaaggcaaaagcgattcccgtagt 516 Query: 180 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatac 239 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 515 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcgatac 456 Query: 240 aagcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagt 299 |||||| |||||||||||||||||||| |||||| |||||||| ||||| | |||||||| Sbjct: 455 aagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagt 396 Query: 300 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 359 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 395 agccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccg 336 Query: 360 tgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 335 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 284
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 541 bits (273), Expect = e-151 Identities = 377/411 (91%), Gaps = 1/411 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| Sbjct: 35 aagggcgtagcaagcgacgaaatgcttcggggagctgaaaataagtatagatccggagat 94 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||| ||||||||||||||| |||||||||||| || |||||||||||||| Sbjct: 95 tcccgaataggttaaccttttaaactgc-tgctgaatccataggcgggcaagagacaacc 153 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||| Sbjct: 154 tggcgaactgaaacatcttagtagccggaggaagagaaagcaaaagcgattctcgtagta 213 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 ||||||||||||| ||||||||||||||||||||||||||||||||||| |||| | | | Sbjct: 214 gcggcgagcgaaacgggagcagcctaaaccgtgaaaacggggttgtgggggagctaaaga 273 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 ||| |||| ||||||||||||| ||||||| | |||||||| |||| | ||||||||| Sbjct: 274 agcattgtattgctaggcgaagcagttgagtcctgcaccctagatggtgagagtccagta 333 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 |||||||||| || ||||| ||||| ||||||||| |||||||||||||||||||||| Sbjct: 334 accgaaagcattacaagcttgggctctaacccgagtaacatggggcacgtggaatcccgt 393 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 394 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 444
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 531 bits (268), Expect = e-148 Identities = 379/415 (91%), Gaps = 5/415 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||| Sbjct: 52 aagggcgtagcaagcgacgaaatgcttcggggagctgaaaataagtatggatccggagat 111 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||| ||||||||||||||| |||||||| ||| || |||||||||||||| Sbjct: 112 tcccgaataggttaaccttttaaactgc-tgctgaattcataggcgggcaagagacaacc 170 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| Sbjct: 171 cggcgaactgaaacatcttagtagccggaggaaaagaaagcaaaagcgattctcgtagta 230 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatac- 239 |||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||| Sbjct: 231 gcggcgagcgaaatgggagcggcctaaaccgtgaaaacggggttgtgggggagctataca 290 Query: 240 ---aagcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtcc 296 |||| ||| ||||||||||||||| ||||||| | |||||| | |||| | ||||| Sbjct: 291 aataagcattgcgctgctaggcgaagcagttgagtcctgcaccccagatggtgagagtcc 350 Query: 297 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 356 |||| |||||||||| || | |||||||||| |||||||||||||||||||||||||||| Sbjct: 351 agtaaccgaaagcataacaatcttatgctctaacccgagtagcatggggcacgtggaatc 410 Query: 357 ccgtgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 411 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 465
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 498 bits (251), Expect = e-138 Identities = 368/405 (90%), Gaps = 2/405 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 ||||| |||| || ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 51 aagggtgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccgtagat 110 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||| || ||||||| | ||||| |||| |||||||| ||||| ||||||||||| Sbjct: 111 tcccgaatggggtaacctttcacactgc-tgctcaatccatgggcaggaaagagacaacc 169 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 170 tggcgaactgaaacatcttagtagccagaggaaaataaagcaaaagcgattcccatagta 229 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| | Sbjct: 230 gcggcgagcgaaatgggatcagcctaaaccgcgaaaacggggttgtgggagagcaataaa 289 Query: 241 agcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctanatggctaaagtccagt 299 ||||| ||||||||||||||||| | || | || |||||||| ||||| |||||||||| Sbjct: 290 agcgtcgtgctgctaggcgaagcagcttaaatgatgcaccctagatggcgaaagtccagt 349 Query: 300 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 359 || | |||||||||||| || |||||||||||||||||||||| |||||| ||||||| Sbjct: 350 agtcaaaagcatcactacgttgcgctctgacccgagtagcatgggacacgtgtaatcccg 409 Query: 360 tgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggt 404 |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 410 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 454
>gb|M37149.1|SOYCPRTG Soybean chloroplast 16S rRNA (3' end), 18S rRNA (5' end), Ile-tRNA, and Ala-tRNA genes Length = 3022 Score = 496 bits (250), Expect = e-137 Identities = 345/372 (92%), Gaps = 5/372 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||| Sbjct: 2650 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggggat 2709 Query: 61 tcccaa-ataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 119 |||| | |||||||||||||| |||||| ||||||||||| | |||||||||||||||| Sbjct: 2710 tcccgatataggtcaacctttcgaactgc-tgctgaatccacgggcaggcaagagacaac 2768 Query: 120 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 179 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2769 ttggtgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 2828 Query: 180 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatac 239 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 2829 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagctatac 2888 Query: 240 aagcgttgtgctgctaggcgaagcggttgag--tgccgcaccctanatggctaaagtcca 297 ||| || ||||||||||||||||| | ||| ||| |||||||| ||||| | |||||| Sbjct: 2889 aagtgtcgtgctgctaggcgaagcagcagagaatgctgcaccctagatggcgagagtcca 2948 Query: 298 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 357 |||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||| Sbjct: 2949 gtagccgaaagcatcact-gcttacgctctgacccgagtagcatagggcacgtggaatcc 3007 Query: 358 cgtgtgaatcag 369 |||||||||||| Sbjct: 3008 cgtgtgaatcag 3019
>gb|M21402.1|SOYRDNASPA Soybean chloroplast 16S/23S ribosomal intergenic spacer DNA Length = 1277 Score = 496 bits (250), Expect = e-137 Identities = 345/372 (92%), Gaps = 5/372 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||| Sbjct: 905 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggggat 964 Query: 61 tcccaa-ataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 119 |||| | |||||||||||||| |||||| ||||||||||| | |||||||||||||||| Sbjct: 965 tcccgatataggtcaacctttcgaactgc-tgctgaatccacgggcaggcaagagacaac 1023 Query: 120 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 179 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1024 ttggtgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 1083 Query: 180 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatac 239 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1084 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagctatac 1143 Query: 240 aagcgttgtgctgctaggcgaagcggttgag--tgccgcaccctanatggctaaagtcca 297 ||| || ||||||||||||||||| | ||| ||| |||||||| ||||| | |||||| Sbjct: 1144 aagtgtcgtgctgctaggcgaagcagcagagaatgctgcaccctagatggcgagagtcca 1203 Query: 298 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 357 |||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||| Sbjct: 1204 gtagccgaaagcatcact-gcttacgctctgacccgagtagcatagggcacgtggaatcc 1262 Query: 358 cgtgtgaatcag 369 |||||||||||| Sbjct: 1263 cgtgtgaatcag 1274
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 488 bits (246), Expect = e-135 Identities = 253/256 (98%) Strand = Plus / Plus Query: 156 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 215 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 60 Query: 216 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 275 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 120 Query: 276 caccctanatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 335 ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 121 caccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgag 180 Query: 336 tagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggctaaata 395 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 181 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 240 Query: 396 ctcctgggtgaccgat 411 |||||||||||||||| Sbjct: 241 ctcctgggtgaccgat 256
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 484 bits (244), Expect = e-133 Identities = 251/254 (98%) Strand = Plus / Plus Query: 158 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 217 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 218 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 277 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 278 ccctanatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 337 ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 338 gcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggctaaatact 397 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 398 cctgggtgaccgat 411 |||||||||||||| Sbjct: 241 cctgggtgaccgat 254
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 484 bits (244), Expect = e-133 Identities = 251/254 (98%) Strand = Plus / Plus Query: 158 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 217 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 218 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 277 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 278 ccctanatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 337 ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 338 gcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggctaaatact 397 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 398 cctgggtgaccgat 411 |||||||||||||| Sbjct: 241 cctgggtgaccgat 254
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 482 bits (243), Expect = e-133 Identities = 250/253 (98%) Strand = Plus / Plus Query: 159 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 218 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 Query: 219 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 278 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 Query: 279 cctanatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 338 |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 180 Query: 339 catggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggctaaatactc 398 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 Query: 399 ctgggtgaccgat 411 ||||||||||||| Sbjct: 241 ctgggtgaccgat 253
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 482 bits (243), Expect = e-133 Identities = 250/253 (98%) Strand = Plus / Plus Query: 159 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 218 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 63 Query: 219 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 278 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 123 Query: 279 cctanatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 338 |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 124 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 183 Query: 339 catggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggctaaatactc 398 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 184 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 243 Query: 399 ctgggtgaccgat 411 ||||||||||||| Sbjct: 244 ctgggtgaccgat 256
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 478 bits (241), Expect = e-132 Identities = 248/251 (98%) Strand = Plus / Plus Query: 161 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 220 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 60 Query: 221 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 280 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 120 Query: 281 tanatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagca 340 || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 121 tagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagca 180 Query: 341 tggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggctaaatactcct 400 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 181 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 240 Query: 401 gggtgaccgat 411 ||||||||||| Sbjct: 241 gggtgaccgat 251
>dbj|AK104484.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H11, full insert sequence Length = 1091 Score = 478 bits (241), Expect = e-132 Identities = 244/245 (99%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 49 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 108 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 109 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 168 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 169 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 228 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 229 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 288 Query: 241 agcgt 245 ||||| Sbjct: 289 agcgt 293
>dbj|AK060870.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H08, full insert sequence Length = 1091 Score = 478 bits (241), Expect = e-132 Identities = 244/245 (99%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 49 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 108 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 109 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 168 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 169 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 228 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 229 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 288 Query: 241 agcgt 245 ||||| Sbjct: 289 agcgt 293
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 446 bits (225), Expect = e-122 Identities = 307/332 (92%), Gaps = 2/332 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 177082 aagggcgtagtaatcgacgaaatgcttcggggagttgaaaatcagcatagatccggagat 177141 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| |||||| |||||||| |||||| ||||||||||||| |||||||||||| |||| Sbjct: 177142 tcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagagaacc 177200 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177201 aggcgaactgaaagatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 177260 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 177261 gcggcgggcgaaatgggagctgcctaaaccgtgaaaacggggttgtgggagagcaataca 177320 Query: 241 agcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctanatggctaaagtccagt 299 ||||| |||| |||||||||||| | || ||| |||||||| ||||| |||||||||| Sbjct: 177321 agcgtcgtgcagctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagt 177380 Query: 300 agccgaaagcatcactagcttatgctctgacc 331 |||||||||||||||||||||| ||||||||| Sbjct: 177381 agccgaaagcatcactagcttaggctctgacc 177412 Score = 46.1 bits (23), Expect = 0.090 Identities = 23/23 (100%) Strand = Plus / Plus Query: 123 gcgaactgaaacatcttagtagc 145 ||||||||||||||||||||||| Sbjct: 417776 gcgaactgaaacatcttagtagc 417798 Score = 46.1 bits (23), Expect = 0.090 Identities = 23/23 (100%) Strand = Plus / Plus Query: 123 gcgaactgaaacatcttagtagc 145 ||||||||||||||||||||||| Sbjct: 67026 gcgaactgaaacatcttagtagc 67048
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 424 bits (214), Expect = e-116 Identities = 236/244 (96%), Gaps = 5/244 (2%) Strand = Plus / Minus Query: 173 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 232 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75478 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 75419 Query: 233 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaa 292 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 75418 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 75359 Query: 293 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 352 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 75358 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 75299 Query: 353 aatcccgtgtgaatca-----gnaaggaccaccttgcaaggctaaatactcctgggtgac 407 |||||||||||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 75298 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 75239 Query: 408 cgat 411 |||| Sbjct: 75238 cgat 75235 Score = 343 bits (173), Expect = 3e-91 Identities = 176/177 (99%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75661 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 75602 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 75601 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 75542 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 177 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75541 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 75485 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 104 gcaggcaagagacaacctggcgaactgaaacatcttagta 143 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 430381 gcaggcaagagacaacctagcgaactgaaacatcttagta 430342
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 424 bits (214), Expect = e-116 Identities = 236/244 (96%), Gaps = 5/244 (2%) Strand = Plus / Plus Query: 173 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 232 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382060 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 382119 Query: 233 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaa 292 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 382120 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 382179 Query: 293 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 352 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 382180 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 382239 Query: 353 aatcccgtgtgaatca-----gnaaggaccaccttgcaaggctaaatactcctgggtgac 407 |||||||||||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 382240 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 382299 Query: 408 cgat 411 |||| Sbjct: 382300 cgat 382303 Score = 343 bits (173), Expect = 3e-91 Identities = 176/177 (99%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381877 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 381936 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 381937 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 381996 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 177 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381997 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 382053 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 104 gcaggcaagagacaacctggcgaactgaaacatcttagta 143 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 254042 gcaggcaagagacaacctagcgaactgaaacatcttagta 254081 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 104 gcaggcaagagacaacctggcgaactgaaacatcttagta 143 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 125350 gcaggcaagagacaacctagcgaactgaaacatcttagta 125389
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 424 bits (214), Expect = e-116 Identities = 236/244 (96%), Gaps = 5/244 (2%) Strand = Plus / Minus Query: 173 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 232 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113569 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 113510 Query: 233 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaa 292 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 113509 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 113450 Query: 293 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 352 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 113449 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 113390 Query: 353 aatcccgtgtgaatca-----gnaaggaccaccttgcaaggctaaatactcctgggtgac 407 |||||||||||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 113389 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 113330 Query: 408 cgat 411 |||| Sbjct: 113329 cgat 113326 Score = 343 bits (173), Expect = 3e-91 Identities = 176/177 (99%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113752 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 113693 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 113692 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 113633 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 177 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113632 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 113576 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 104 gcaggcaagagacaacctggcgaactgaaacatcttagta 143 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 323068 gcaggcaagagacaacctagcgaactgaaacatcttagta 323029
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 424 bits (214), Expect = e-116 Identities = 236/244 (96%), Gaps = 5/244 (2%) Strand = Plus / Minus Query: 173 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 232 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368251 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 368192 Query: 233 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaa 292 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 368191 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 368132 Query: 293 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 352 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 368131 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 368072 Query: 353 aatcccgtgtgaatca-----gnaaggaccaccttgcaaggctaaatactcctgggtgac 407 |||||||||||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 368071 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 368012 Query: 408 cgat 411 |||| Sbjct: 368011 cgat 368008 Score = 424 bits (214), Expect = e-116 Identities = 236/244 (96%), Gaps = 5/244 (2%) Strand = Plus / Minus Query: 173 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 232 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184856 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 184797 Query: 233 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaa 292 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 184796 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 184737 Query: 293 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 352 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 184736 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 184677 Query: 353 aatcccgtgtgaatca-----gnaaggaccaccttgcaaggctaaatactcctgggtgac 407 |||||||||||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 184676 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 184617 Query: 408 cgat 411 |||| Sbjct: 184616 cgat 184613 Score = 343 bits (173), Expect = 3e-91 Identities = 176/177 (99%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368434 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 368375 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 368374 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 368315 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 177 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368314 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 368258 Score = 343 bits (173), Expect = 3e-91 Identities = 176/177 (99%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 185039 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 184980 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 184979 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 184920 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 177 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184919 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 184863 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 104 gcaggcaagagacaacctggcgaactgaaacatcttagta 143 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 295897 gcaggcaagagacaacctagcgaactgaaacatcttagta 295858
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 398 bits (201), Expect = e-108 Identities = 290/319 (90%), Gaps = 1/319 (0%) Strand = Plus / Minus Query: 69 aggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaac 128 |||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||| ||| Sbjct: 3695 aggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcaaac 3637 Query: 129 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 188 ||||| |||||||||||||||||||||||||||||||| ||||||||||||| || |||| Sbjct: 3636 tgaaatatcttagtagccagaggaaaagaaagcaaaagtgattcccgtagtaacgacgag 3577 Query: 189 cgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgt 248 ||||||||||||||||||||||| |||| | ||||||||||||||||| ||| ||| || Sbjct: 3576 tgaaatgggagcagcctaaaccgtaaaaatgaggttgtgggagagcaatgcaaacgtagt 3517 Query: 249 gctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaag 308 || ||||||| ||||||| ||||| |||||||| ||||| | ||| |||||||||||| Sbjct: 3516 gccgctaggcaaagcggtggagtgttgcaccctagatggcgagagtttagtagccgaaag 3457 Query: 309 catcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatca 368 |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 3456 catccctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatta 3397 Query: 369 gnaaggaccaccttgcaag 387 | ||||||||||||||||| Sbjct: 3396 gcaaggaccaccttgcaag 3378 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Minus Query: 13 agcgacgaaatgcttcggggagttgaaaataagcatagatccggag 58 |||||||||||||||| | |||||| |||||||| |||||| |||| Sbjct: 3739 agcgacgaaatgcttcagagagttgcaaataagcgtagatcaggag 3694
>gb|DQ460110.1| Nicotiana tabacum cDNA-AFLP fragment H-N_BC3M12-1 sequence Length = 249 Score = 391 bits (197), Expect = e-105 Identities = 235/247 (95%), Gaps = 1/247 (0%) Strand = Plus / Plus Query: 166 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 225 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1 gcgattcccgtagtagcggcgagcgaaatgggagcagcctagaccgtgaaaacggggttg 60 Query: 226 tgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctana 284 |||||||||||||||||||| ||||||||||||||||| | || ||| |||||||| | Sbjct: 61 tgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctaga 120 Query: 285 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 344 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 Query: 345 gcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggt 404 ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgctaggctaaatactcctgggt 240 Query: 405 gaccgat 411 ||||||| Sbjct: 241 gaccgat 247
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 365 bits (184), Expect = 8e-98 Identities = 218/228 (95%), Gaps = 1/228 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 79719 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccgaggat 79660 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||||||||||| |||||| |||||||| || ||||||||||||||||||| Sbjct: 79659 tcccgaataggtcaacctttcgaactgc-tgctgaattcacgagcaggcaagagacaacc 79601 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79600 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 79541 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgg 228 |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 79540 gcggcgagcgaaatgggaacagcctaaaccgtgaaaacggggttgtgg 79493
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 Score = 355 bits (179), Expect = 7e-95 Identities = 182/183 (99%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75817 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 75876 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 75877 tcccaaataggtcaaccttttaaactgcctgcggaatccatgagcaggcaagagacaacc 75936 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75937 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 75996 Query: 181 gcg 183 ||| Sbjct: 75997 gcg 75999 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 ggcgaactgaaacatcttag 141 |||||||||||||||||||| Sbjct: 320856 ggcgaactgaaacatcttag 320837
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 327 bits (165), Expect = 2e-86 Identities = 349/411 (84%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||| |||| |||||||||||||||||||| ||||||| | |||||||||||||| Sbjct: 143970 aagggcgtggcaaacgacgaaatgcttcggggagccgaaaataggtatagatccggagat 144029 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||| |||||| |||||||||||||||| || ||||| |||||||||||| Sbjct: 144030 tcccgaataggttaaccttccaaactgcctgctgaattcagaagcagacaagagacaacc 144089 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 ||||||||||||||||||||||||| ||||| | |||||||||||||||||| ||||| Sbjct: 144090 cggcgaactgaaacatcttagtagccggaggaggaaaaagcaaaagcgattcccctagta 144149 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 ||||||| |||| |||| ||||||||||||||| ||||||||||||||||| || Sbjct: 144150 acggcgagtgaaacgggaagagcctaaaccgtgaagacggggttgtgggagagtgatgag 144209 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 || | || | ||||||||||| ||||||||| |||||| | |||| | ||||||||| Sbjct: 144210 ggcttcgttttactaggcgaagcagttgagtgctgcaccccagatggtgatagtccagta 144269 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 |||| ||| | |||||| | |||| |||| |||||||||||||||| |||||||| Sbjct: 144270 gccggaagtacagctagctcacgctccaacccaagtagcatggggcacgcaaaatcccgt 144329 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| |||||||||||| ||||||||||| ||||| ||||||||| Sbjct: 144330 gtgaatcagcgaggaccaccttgtaaggctaaatattcctgagtgaccgat 144380 Score = 327 bits (165), Expect = 2e-86 Identities = 349/411 (84%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||| |||| |||||||||||||||||||| ||||||| | |||||||||||||| Sbjct: 88881 aagggcgtggcaaacgacgaaatgcttcggggagccgaaaataggtatagatccggagat 88822 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||||||| |||||| |||||||||||||||| || ||||| |||||||||||| Sbjct: 88821 tcccgaataggttaaccttccaaactgcctgctgaattcagaagcagacaagagacaacc 88762 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 ||||||||||||||||||||||||| ||||| | |||||||||||||||||| ||||| Sbjct: 88761 cggcgaactgaaacatcttagtagccggaggaggaaaaagcaaaagcgattcccctagta 88702 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 ||||||| |||| |||| ||||||||||||||| ||||||||||||||||| || Sbjct: 88701 acggcgagtgaaacgggaagagcctaaaccgtgaagacggggttgtgggagagtgatgag 88642 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagta 300 || | || | ||||||||||| ||||||||| |||||| | |||| | ||||||||| Sbjct: 88641 ggcttcgttttactaggcgaagcagttgagtgctgcaccccagatggtgatagtccagta 88582 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 |||| ||| | |||||| | |||| |||| |||||||||||||||| |||||||| Sbjct: 88581 gccggaagtacagctagctcacgctccaacccaagtagcatggggcacgcaaaatcccgt 88522 Query: 361 gtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||||| |||||||||||| ||||||||||| ||||| ||||||||| Sbjct: 88521 gtgaatcagcgaggaccaccttgtaaggctaaatattcctgagtgaccgat 88471
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 262 bits (132), Expect = 8e-67 Identities = 185/200 (92%), Gaps = 2/200 (1%) Strand = Plus / Minus Query: 13 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 72 ||||||||||||||||||||||||| || | |||||||||||||||||||| ||||||| Sbjct: 6512 agcgacgaaatgcttcggggagttgtaattc-gcatagatccggagattcccgaataggt 6454 Query: 73 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 132 |||||||| |||||| ||||||||||||| ||||| ||| | |||||||| |||||||| Sbjct: 6453 taaccttttgaactgc-tgctgaatccatgggcaggtaaggggcaacctggtgaactgaa 6395 Query: 133 acatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaa 192 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 6394 acatcttagtaaccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaa 6335 Query: 193 atgggagcagcctaaaccgt 212 |||||||||||||||||||| Sbjct: 6334 atgggagcagcctaaaccgt 6315 Score = 246 bits (124), Expect = 5e-62 Identities = 179/198 (90%) Strand = Plus / Minus Query: 214 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 273 ||||||||||||||||||||||||| |||||||||| |||||| ||||| ||||||| | Sbjct: 6284 aaaacggggttgtgggagagcaatataagcgttgtgtcgctaggtgaagcagttgagtcc 6225 Query: 274 cgcaccctanatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 333 |||||||| |||| | |||||||||| ||||||| || | ||||| ||||| ||||| Sbjct: 6224 tgcaccctagatggtgagagtccagtagtcgaaagcggcattggcttacgctctaacccg 6165 Query: 334 agtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggctaaa 393 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 6164 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 6105 Query: 394 tactcctgggtgaccgat 411 |||||||||||||||||| Sbjct: 6104 tactcctgggtgaccgat 6087
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 262 bits (132), Expect = 8e-67 Identities = 192/212 (90%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||| ||| || |||||| ||||||||||| Sbjct: 39 aagggcgtagcaagcgacgaaatgcttcggggagctgagaacaagcattgatccggagat 98 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||| |||||| ||||| || |||||||||||||| || | ||||||||||||||| Sbjct: 99 gcccgaataggggaacctatttgactgcctgctgaattgatagggaggcaagagacaacc 158 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 159 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctgagta 218 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgt 212 | |||||||||||||||| ||||||||||||| Sbjct: 219 gtggcgagcgaaatgggaacagcctaaaccgt 250 Score = 127 bits (64), Expect = 3e-26 Identities = 78/83 (93%) Strand = Plus / Plus Query: 329 acccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaagg 388 ||||||||||||||||||||||| ||||||||||||||||| |||||||||| | |||| Sbjct: 378 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 437 Query: 389 ctaaatactcctgggtgaccgat 411 ||||||||||||||||||||||| Sbjct: 438 ctaaatactcctgggtgaccgat 460
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 262 bits (132), Expect = 8e-67 Identities = 135/136 (99%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19434055 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 19433996 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19433995 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 19433936 Query: 121 tggcgaactgaaacat 136 |||||||||||||||| Sbjct: 19433935 tggcgaactgaaacat 19433920
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 262 bits (132), Expect = 8e-67 Identities = 192/212 (90%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||| ||| || |||||| ||||||||||| Sbjct: 52 aagggcgtagcaagcgacgaaatgcttcggggagctgagaacaagcattgatccggagat 111 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||| |||||| ||||| || |||||||||||||| || | ||||||||||||||| Sbjct: 112 gcccgaataggggaacctatttgactgcctgctgaattgatagggaggcaagagacaacc 171 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 172 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctgagta 231 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgt 212 | |||||||||||||||| ||||||||||||| Sbjct: 232 gtggcgagcgaaatgggaacagcctaaaccgt 263 Score = 127 bits (64), Expect = 3e-26 Identities = 78/83 (93%) Strand = Plus / Plus Query: 329 acccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaagg 388 ||||||||||||||||||||||| ||||||||||||||||| |||||||||| | |||| Sbjct: 391 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 450 Query: 389 ctaaatactcctgggtgaccgat 411 ||||||||||||||||||||||| Sbjct: 451 ctaaatactcctgggtgaccgat 473
>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476H10 Length = 151703 Score = 262 bits (132), Expect = 8e-67 Identities = 135/136 (99%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51582 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 51523 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 51522 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 51463 Query: 121 tggcgaactgaaacat 136 |||||||||||||||| Sbjct: 51462 tggcgaactgaaacat 51447
>dbj|AP004879.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0475F05 Length = 147522 Score = 262 bits (132), Expect = 8e-67 Identities = 135/136 (99%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119546 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 119487 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119486 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 119427 Query: 121 tggcgaactgaaacat 136 |||||||||||||||| Sbjct: 119426 tggcgaactgaaacat 119411
>emb|AJ535053.1|OSA535053 Oryza sativa (japonica cultivar-group) pdr2 gene for PDR-like ABC transporter, exons 1-22 Length = 15112 Score = 262 bits (132), Expect = 8e-67 Identities = 135/136 (99%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6076 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 6135 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 6136 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 6195 Query: 121 tggcgaactgaaacat 136 |||||||||||||||| Sbjct: 6196 tggcgaactgaaacat 6211
>dbj|AK059621.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-H01, full insert sequence Length = 1729 Score = 258 bits (130), Expect = 1e-65 Identities = 133/134 (99%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1596 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 1655 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1656 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 1715 Query: 121 tggcgaactgaaac 134 |||||||||||||| Sbjct: 1716 tggcgaactgaaac 1729
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 252 bits (127), Expect = 8e-64 Identities = 190/211 (90%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 ||||||||||||||||||||||||||||||| || ||| || |||||| ||||||||||| Sbjct: 156 aagggcgtagcaagcgacgaaatgcttcgggaagctgagaacaagcattgatccggagat 215 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||| |||||| ||||| || |||||||||||||| || | ||||||||||||||| Sbjct: 216 gcccgaataggggaacctatttgactgcctgctgaattgatagggaggcaagagacaacc 275 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 276 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctgagta 335 Query: 181 gcggcgagcgaaatgggagcagcctaaaccg 211 | |||||||||||||||| |||||||||||| Sbjct: 336 gtggcgagcgaaatgggaacagcctaaaccg 366 Score = 125 bits (63), Expect = 1e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggc 389 |||||||||||||||||||||| ||||||||||||||||| |||||||||| | ||||| Sbjct: 496 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 555 Query: 390 taaatactcctgggtgaccgat 411 |||||||||||||||||||||| Sbjct: 556 taaatactcctgggtgaccgat 577
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 250 bits (126), Expect = 3e-63 Identities = 264/309 (85%), Gaps = 5/309 (1%) Strand = Plus / Minus Query: 107 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 166 |||||||||| ||| ||||||| |||||||| | ||||| | |||| |||| ||||||| Sbjct: 139114 ggcaagagacgacccggcgaaccgaaacatccaaatagccgggggaagagaaggcaaaag 139055 Query: 167 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 226 ||||||||| |||||||||||||||| ||||| ||||||||||||| ||||||||||| Sbjct: 139054 cgattcccgcagtagcggcgagcgaagagggagtagcctaaaccgtgggaacggggttgt 138995 Query: 227 gggagagcaatac----aagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 282 |||||||| ||| ||| ||||||||| |||| |||||||| |||| ||||| || | Sbjct: 138994 gggagagcgataagtataag-gttgtgctgttaggtgaagcggtcgagtcccgcatccca 138936 Query: 283 natggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 342 | || || ||||| ||||||| ||||| ||| ||||| |||||||||||||||||||| Sbjct: 138935 gacggttagagtccggtagccggaagcagcacaggcttacgctctgacccgagtagcatg 138876 Query: 343 gggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggctaaatactcctgg 402 ||||||||||||||||||| ||||||| |||||||||| | ||||||||||||| |||| Sbjct: 138875 gggcacgtggaatcccgtgcgaatcagcgaggaccacctcgtaaggctaaatacttctgg 138816 Query: 403 gtgaccgat 411 ||||||||| Sbjct: 138815 gtgaccgat 138807 Score = 250 bits (126), Expect = 3e-63 Identities = 264/309 (85%), Gaps = 5/309 (1%) Strand = Plus / Plus Query: 107 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 166 |||||||||| ||| ||||||| |||||||| | ||||| | |||| |||| ||||||| Sbjct: 82763 ggcaagagacgacccggcgaaccgaaacatccaaatagccgggggaagagaaggcaaaag 82822 Query: 167 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 226 ||||||||| |||||||||||||||| ||||| ||||||||||||| ||||||||||| Sbjct: 82823 cgattcccgcagtagcggcgagcgaagagggagtagcctaaaccgtgggaacggggttgt 82882 Query: 227 gggagagcaatac----aagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 282 |||||||| ||| ||| ||||||||| |||| |||||||| |||| ||||| || | Sbjct: 82883 gggagagcgataagtataag-gttgtgctgttaggtgaagcggtcgagtcccgcatccca 82941 Query: 283 natggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 342 | || || ||||| ||||||| ||||| ||| ||||| |||||||||||||||||||| Sbjct: 82942 gacggttagagtccggtagccggaagcagcacaggcttacgctctgacccgagtagcatg 83001 Query: 343 gggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggctaaatactcctgg 402 ||||||||||||||||||| ||||||| |||||||||| | ||||||||||||| |||| Sbjct: 83002 gggcacgtggaatcccgtgcgaatcagcgaggaccacctcgtaaggctaaatacttctgg 83061 Query: 403 gtgaccgat 411 ||||||||| Sbjct: 83062 gtgaccgat 83070
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 250 bits (126), Expect = 3e-63 Identities = 207/234 (88%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||| | ||||||||||||||||||||||| || || ||||||||||||| ||| Sbjct: 52 aagggcgtggtaagcgacgaaatgcttcggggagctgcgaacaagcatagatccgaagac 111 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||| |||||| |||||| || ||| | |||||||||||| ||| | |||||| |||| Sbjct: 112 ccccgaatagggcaacctcttgtactacttgctgaatccataggcaagaaagagataacc 171 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 172 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctgagta 231 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 234 ||||||||||||| |||| |||||||||||| |||| ||||||||||||||||| Sbjct: 232 gcggcgagcgaaacgggatcagcctaaaccgcgaaagcggggttgtgggagagc 285 Score = 125 bits (63), Expect = 1e-25 Identities = 136/161 (84%) Strand = Plus / Plus Query: 251 tgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagca 310 ||||||| ||||| |||||| | ||||| || |||| | ||||||||| | |||||| Sbjct: 302 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 361 Query: 311 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagn 370 | ||| ||| ||||| |||||||||||||||| |||||| ||||||||||||||||| Sbjct: 362 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 421 Query: 371 aaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 |||||||||| | ||||||||||||||||||||||||||| Sbjct: 422 gaggaccacctcgtaaggctaaatactcctgggtgaccgat 462
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 250 bits (126), Expect = 3e-63 Identities = 207/234 (88%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||| | ||||||||||||||||||||||| || || ||||||||||||| ||| Sbjct: 125213 aagggcgtggtaagcgacgaaatgcttcggggagctgcgaacaagcatagatccgaagac 125154 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||| |||||| |||||| || ||| | |||||||||||| ||| | |||||| |||| Sbjct: 125153 ccccgaatagggcaacctcttgtactacttgctgaatccataggcaagaaagagataacc 125094 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 125093 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctgagta 125034 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 234 ||||||||||||| |||| |||||||||||| |||| ||||||||||||||||| Sbjct: 125033 gcggcgagcgaaacgggatcagcctaaaccgcgaaagcggggttgtgggagagc 124980 Score = 250 bits (126), Expect = 3e-63 Identities = 207/234 (88%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||| | ||||||||||||||||||||||| || || ||||||||||||| ||| Sbjct: 94653 aagggcgtggtaagcgacgaaatgcttcggggagctgcgaacaagcatagatccgaagac 94712 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||| |||||| |||||| || ||| | |||||||||||| ||| | |||||| |||| Sbjct: 94713 ccccgaatagggcaacctcttgtactacttgctgaatccataggcaagaaagagataacc 94772 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 94773 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctgagta 94832 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 234 ||||||||||||| |||| |||||||||||| |||| ||||||||||||||||| Sbjct: 94833 gcggcgagcgaaacgggatcagcctaaaccgcgaaagcggggttgtgggagagc 94886 Score = 125 bits (63), Expect = 1e-25 Identities = 136/161 (84%) Strand = Plus / Minus Query: 251 tgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagca 310 ||||||| ||||| |||||| | ||||| || |||| | ||||||||| | |||||| Sbjct: 124963 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 124904 Query: 311 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagn 370 | ||| ||| ||||| |||||||||||||||| |||||| ||||||||||||||||| Sbjct: 124903 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 124844 Query: 371 aaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 |||||||||| | ||||||||||||||||||||||||||| Sbjct: 124843 gaggaccacctcgtaaggctaaatactcctgggtgaccgat 124803 Score = 125 bits (63), Expect = 1e-25 Identities = 136/161 (84%) Strand = Plus / Plus Query: 251 tgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagca 310 ||||||| ||||| |||||| | ||||| || |||| | ||||||||| | |||||| Sbjct: 94903 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 94962 Query: 311 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagn 370 | ||| ||| ||||| |||||||||||||||| |||||| ||||||||||||||||| Sbjct: 94963 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 95022 Query: 371 aaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 |||||||||| | ||||||||||||||||||||||||||| Sbjct: 95023 gaggaccacctcgtaaggctaaatactcctgggtgaccgat 95063
>emb|AJ538583.1|NTA538583 Nicotiana tabacum cDNA-AFLP-fragment BC3-M31-041 Length = 226 Score = 244 bits (123), Expect = 2e-61 Identities = 133/137 (97%) Strand = Plus / Plus Query: 275 gcaccctanatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 334 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10 gcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccga 69 Query: 335 gtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggctaaat 394 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 70 gtagcatggggcacgtggaatcccgtgtgaatcaacaaggaccaccttgcaaggctaaat 129 Query: 395 actcctgggtgaccgat 411 ||||||||||||||||| Sbjct: 130 actcctgggtgaccgat 146
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 234 bits (118), Expect = 2e-58 Identities = 123/125 (98%) Strand = Plus / Plus Query: 287 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 346 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 60 Query: 347 acgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtga 406 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 61 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 120 Query: 407 ccgat 411 ||||| Sbjct: 121 ccgat 125
>gb|DQ160136.1| Taraxacum officinale To110-2 mRNA, partial sequence Length = 282 Score = 228 bits (115), Expect = 1e-56 Identities = 120/122 (98%) Strand = Plus / Plus Query: 290 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 349 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3 aaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacg 62 Query: 350 tggaatcccgtgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccg 409 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 63 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 122 Query: 410 at 411 || Sbjct: 123 at 124
>gb|DQ160045.1| Taraxacum officinale To45-1 mRNA, partial sequence Length = 329 Score = 228 bits (115), Expect = 1e-56 Identities = 143/153 (93%) Strand = Plus / Minus Query: 258 cgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcactag 317 |||||| || || ||| |||||||| ||||| |||||||||||||||||||||||||||| Sbjct: 329 cgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 270 Query: 318 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggacc 377 |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 269 cttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 210 Query: 378 accttgcaaggctaaatactcctgggtgaccga 410 |||||||||||||||||||||||| | |||||| Sbjct: 209 accttgcaaggctaaatactcctgcgggaccga 177
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 224 bits (113), Expect = 2e-55 Identities = 328/392 (83%), Gaps = 10/392 (2%) Strand = Plus / Plus Query: 19 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 77 ||||||||| |||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgctttggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 78 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 137 ||| |||||| |||| | |||||| |||| ||||||| ||||||| ||||||||||||| Sbjct: 128 ttt--aactgc-tgcttattccatg-gcagacaagaga-aacctggtgaactgaaacatc 182 Query: 138 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 197 |||||||||||||||||| |||||||||| |||||| |||||| ||| | |||| ||| Sbjct: 183 ttagtagccagaggaaaataaagcaaaagttattcccatagtagtggcaaatgaaaaggg 242 Query: 198 agcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctagg 257 | ||||||||| || |||| |||||| || |||||||| ||| || || |||||| Sbjct: 243 aacagcctaaatcgctaaaatggggtt---ggggagcaataaaagtattttgttgctaga 299 Query: 258 cgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcactag 317 || || || |||| | | |||||| |||| | |||||||||| |||| |||| ||| Sbjct: 300 cggagtagtggagttctgaaccctagatggtgagagtccagtagtataaagtatcattag 359 Query: 318 cttatgc-tctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggac 376 ||||||| | | |||||||||||||||| || |||||||||||||||||||| |||||| Sbjct: 360 cttatgcttttaacccgagtagcatgggacatatggaatcccgtgtgaatcagcaaggac 419 Query: 377 caccttgcaaggctaaatactcctgggtgacc 408 ||||||| |||||||||||||| ||||||||| Sbjct: 420 caccttgaaaggctaaatactcttgggtgacc 451
>dbj|AP006444.1| Brassica napus mitochondrial DNA, complete genome Length = 221853 Score = 224 bits (113), Expect = 2e-55 Identities = 151/161 (93%), Gaps = 2/161 (1%) Strand = Plus / Minus Query: 5 gcgtagcaagcgacgaaa-tgcttcggggagttgaaaataagcatagatccggagattcc 63 |||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 89827 gcgtagtaagcgacgaaaatgcttcggggagttgaaaataagcgtagatccggagattcc 89768 Query: 64 caaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctgg 123 ||||||| |||||||| |||||| ||||||||||||| |||||||||||||||||||| Sbjct: 89767 ggaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaagagacaacctgg 89709 Query: 124 cgaactgaaacatcttagtagccagaggaaaagaaagcaaa 164 ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 89708 cgaactgaaacatcttactagccagaggaaaagaaagcaaa 89668
>gb|AC172860.1| Brassica rapa subsp. pekinensis clone KBrB042G11, complete sequence Length = 124347 Score = 224 bits (113), Expect = 2e-55 Identities = 151/161 (93%), Gaps = 2/161 (1%) Strand = Plus / Plus Query: 5 gcgtagcaagcgacgaaa-tgcttcggggagttgaaaataagcatagatccggagattcc 63 |||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 443 gcgtagtaagcgacgaaaatgcttcggggagttgaaaataagcgtagatccggagattcc 502 Query: 64 caaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctgg 123 ||||||| |||||||| |||||| ||||||||||||| |||||||||||||||||||| Sbjct: 503 ggaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaagagacaacctgg 561 Query: 124 cgaactgaaacatcttagtagccagaggaaaagaaagcaaa 164 ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 562 cgaactgaaacatcttactagccagaggaaaagaaagcaaa 602
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 214 bits (108), Expect = 2e-52 Identities = 184/208 (88%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| |||||||||||||||||||||||| ||||| | |||||||||||||||| Sbjct: 4085 aagggcgtagtaagcgacgaaatgcttcggggagtcgaaaacaggcatagatccggagat 4144 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||| || |||| || |||||| ||||||||||| || | |||||| |||| Sbjct: 4145 tcccgaatggggtaaccccttgtactgcc-gctgaatccataggcggataagagagaacc 4203 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 ||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||| Sbjct: 4204 tggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcgattccctgagta 4263 Query: 181 gcggcgagcgaaatgggagcagcctaaa 208 ||||||||||||||||||| |||||||| Sbjct: 4264 gcggcgagcgaaatgggagaagcctaaa 4291 Score = 101 bits (51), Expect = 2e-18 Identities = 104/122 (85%) Strand = Plus / Plus Query: 290 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 349 |||||||||||| |||||||| ||| ||||| ||||| |||| ||||||||||| |||| Sbjct: 4385 aaagtccagtagtcgaaagcaacacaagctttagctctaacccaagtagcatgggacacg 4444 Query: 350 tggaatcccgtgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccg 409 | ||||| |||||||| | |||||||||| | |||||||||||||||||||| |||| Sbjct: 4445 ggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaatactcctgggtaaccg 4504 Query: 410 at 411 || Sbjct: 4505 at 4506
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 214 bits (108), Expect = 2e-52 Identities = 184/208 (88%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| |||||||||||||||||||||||| ||||| | |||||||||||||||| Sbjct: 52 aagggcgtagtaagcgacgaaatgcttcggggagtcgaaaacaggcatagatccggagat 111 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||| || |||| || |||||| ||||||||||| || | |||||| |||| Sbjct: 112 tcccgaatggggtaaccccttgtactgcc-gctgaatccataggcggataagagagaacc 170 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 ||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||| Sbjct: 171 tggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcgattccctgagta 230 Query: 181 gcggcgagcgaaatgggagcagcctaaa 208 ||||||||||||||||||| |||||||| Sbjct: 231 gcggcgagcgaaatgggagaagcctaaa 258 Score = 101 bits (51), Expect = 2e-18 Identities = 104/122 (85%) Strand = Plus / Plus Query: 290 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 349 |||||||||||| |||||||| ||| ||||| ||||| |||| ||||||||||| |||| Sbjct: 352 aaagtccagtagtcgaaagcaacacaagctttagctctaacccaagtagcatgggacacg 411 Query: 350 tggaatcccgtgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccg 409 | ||||| |||||||| | |||||||||| | |||||||||||||||||||| |||| Sbjct: 412 ggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaatactcctgggtaaccg 471 Query: 410 at 411 || Sbjct: 472 at 473
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 206 bits (104), Expect = 4e-50 Identities = 200/232 (86%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| ||||||||||||||||||||||| || || ||| ||||||||| |||| Sbjct: 52 aagggcgtagtaagcgacgaaatgcttcggggagctgcgaacaagtatagatccgaagat 111 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| |||||| |||||| || ||| |||| ||| ||| | |||| ||||| |||| Sbjct: 112 tcccgaatagggcaacctcttgtactacctgtaaaatacataatcaggttagagaaaacc 171 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 | | ||||||||||||||||||||| ||||||| | |||||||||||||||||| ||||| Sbjct: 172 tagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgattcccttagta 231 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 232 | ||||||||||| |||| ||||||||||||||||| ||||||||||||||| Sbjct: 232 gtggcgagcgaaacgggaacagcctaaaccgtgaaagcggggttgtgggaga 283 Score = 101 bits (51), Expect = 2e-18 Identities = 71/78 (91%) Strand = Plus / Plus Query: 334 agtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggctaaa 393 ||||| ||||| |||||| |||||| | |||||||| ||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 444 Query: 394 tactcctgggtgaccgat 411 |||||||||||||||||| Sbjct: 445 tactcctgggtgaccgat 462
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 206 bits (104), Expect = 4e-50 Identities = 183/208 (87%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| |||||||||||||||||||||||| ||||| | |||||||||||||||| Sbjct: 52 aagggcgtagtaagcgacgaaatgcttcggggagtcgaaaacaggcatagatccggagat 111 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| ||| || |||| || |||||| ||||||| ||| || | |||||| |||| Sbjct: 112 tcccgaatggggtaaccccttgtactgcc-gctgaatacataggcggataagagagaacc 170 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 ||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||| Sbjct: 171 tggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcgattccctgagta 230 Query: 181 gcggcgagcgaaatgggagcagcctaaa 208 ||||||||||||||||||| |||||||| Sbjct: 231 gcggcgagcgaaatgggagaagcctaaa 258 Score = 101 bits (51), Expect = 2e-18 Identities = 104/122 (85%) Strand = Plus / Plus Query: 290 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 349 |||||||||||| |||||||| ||| ||||| ||||| |||| ||||||||||| |||| Sbjct: 352 aaagtccagtagtcgaaagcaacacaagctttagctctaacccaagtagcatgggacacg 411 Query: 350 tggaatcccgtgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgaccg 409 | ||||| |||||||| | |||||||||| | |||||||||||||||||||| |||| Sbjct: 412 ggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaatactcctgggtaaccg 471 Query: 410 at 411 || Sbjct: 472 at 473
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 190 bits (96), Expect = 2e-45 Identities = 198/232 (85%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| |||||||||||||||| |||||| || || ||| ||||||||| |||| Sbjct: 3086 aagggcgtagtaagcgacgaaatgctttggggagctgcgaacaagtatagatccgaagat 3145 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| |||||| |||||| || ||| |||| ||| ||| |||| ||||| |||| Sbjct: 3146 tcccgaatagggcaacctcttgtactacctgtaaaatacatagtcaggttagagaaaacc 3205 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 | | ||||||||||||||||||||| ||||||| | |||||||||||||||||| ||||| Sbjct: 3206 tagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgattcccttagta 3265 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 232 | ||||||||||| |||| ||||||||||||||||| ||||||||||||||| Sbjct: 3266 gtggcgagcgaaacgggaacagcctaaaccgtgaaagcggggttgtgggaga 3317 Score = 101 bits (51), Expect = 2e-18 Identities = 71/78 (91%) Strand = Plus / Plus Query: 334 agtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggctaaa 393 ||||| ||||| |||||| |||||| | |||||||| ||||||||||||| ||||||||| Sbjct: 3419 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 3478 Query: 394 tactcctgggtgaccgat 411 |||||||||||||||||| Sbjct: 3479 tactcctgggtgaccgat 3496
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 186 bits (94), Expect = 4e-44 Identities = 196/230 (85%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| |||||||||||||||||||||| || || ||||||| ||||| |||| Sbjct: 52 aagggcgtagtcagcgacgaaatgcttcggggagctgcgaacaagcataaatccgaagat 111 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| |||||| ||||| || ||| |||| |||| || | |||| ||||| |||| Sbjct: 112 tcccgaatagggtaacctcttgtactacctgtagaattaataatcaggttagagaaaacc 171 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 | | ||||||||||||||||||||| |||||||||||||||||||||||||||| |||| Sbjct: 172 tagtgaactgaaacatcttagtagctagaggaaaagaaagcaaaagcgattccctcagta 231 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 230 | ||||||||||| |||| |||||||||||| |||| ||||||||||||| Sbjct: 232 gtggcgagcgaaacgggaacagcctaaaccgcgaaagcggggttgtggga 281 Score = 85.7 bits (43), Expect = 1e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 334 agtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggctaaa 393 ||||| ||||| |||||| |||||| | |||||| ||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatctacaaggaccaccttgtaaggctaaa 444 Query: 394 tactcctgggtgaccgat 411 |||||||||||||||||| Sbjct: 445 tactcctgggtgaccgat 462
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 184 bits (93), Expect = 2e-43 Identities = 182/209 (87%), Gaps = 2/209 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| ||||||||||| |||||||||||| ||||| | | ||||||||||||| Sbjct: 52 aagggcgtagtaagcgacgaaacgcttcggggagtcgaaaacagacgtagatccggagat 111 Query: 61 tcccaaataggtcaacct-tttaaactgcctgctgaatccatgagcaggcaagagacaac 119 |||| ||| || |||| ||| |||||| ||||||| ||| ||| | |||||||||| Sbjct: 112 tcccgaatggggtaacccctttgtactgcc-gctgaattcataagcggataagagacaac 170 Query: 120 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 179 |||| ||||||||||||||||||| ||||||||||||||||||||||||||| || ||| Sbjct: 171 ctggtgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgatttcctgagt 230 Query: 180 agcggcgagcgaaatgggagcagcctaaa 208 |||||||||||||||||||| |||||||| Sbjct: 231 agcggcgagcgaaatgggagaagcctaaa 259 Score = 99.6 bits (50), Expect = 7e-18 Identities = 79/89 (88%) Strand = Plus / Plus Query: 323 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccacctt 382 ||||| |||| ||||||||||| |||||| ||||||||||||||| | |||||||||| Sbjct: 380 gctctaacccaagtagcatgggacacgtgaaatcccgtgtgaatctgcgaggaccacctc 439 Query: 383 gcaaggctaaatactcctgggtgaccgat 411 ||||||||||||||| |||||| |||||| Sbjct: 440 gcaaggctaaatacttctgggtaaccgat 468
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 182 bits (92), Expect = 6e-43 Identities = 184/211 (87%), Gaps = 4/211 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgct-tcggggagttgaaaataagcatagatccggaga 59 ||||||||| |||||||||||||||| |||| |||| || |||| || |||||||||| Sbjct: 8 aagggcgtaacaagcgacgaaatgctctcggagagtcgagaataggct--gatccggaga 65 Query: 60 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 119 | ||| |||||| ||||| |||||||| |||||||| || |||| | ||||| ||| Sbjct: 66 tccccgaatagggtaacctaataaactgc-tgctgaatatataggcagacgagagataac 124 Query: 120 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 179 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 125 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctcagt 184 Query: 180 agcggcgagcgaaatgggagcagcctaaacc 210 || |||||||||||||||| ||||||||||| Sbjct: 185 agtggcgagcgaaatgggaacagcctaaacc 215 Score = 135 bits (68), Expect = 1e-28 Identities = 79/83 (95%) Strand = Plus / Plus Query: 329 acccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaagg 388 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||| Sbjct: 337 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagg 396 Query: 389 ctaaatactcctgggtgaccgat 411 ||||||||||||||||||||||| Sbjct: 397 ctaaatactcctgggtgaccgat 419
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 172 bits (87), Expect = 6e-40 Identities = 180/207 (86%), Gaps = 3/207 (1%) Strand = Plus / Plus Query: 19 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 78 |||||||||||||||||| ||||||| ||||||||||||||||||| ||||||| ||||| Sbjct: 68 gaaatgcttcggggagttaaaaataaacatagatccggagattcccgaataggtaaacct 127 Query: 79 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 138 || |||||| ||||| | |||||| |||| ||| ||| ||||||| |||||||| ||||| Sbjct: 128 ttaaaactg-ctgcttattccatg-gcagacaaaaga-aacctggtgaactgaatcatct 184 Query: 139 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 198 |||||| |||||||||| |||||||||| ||| || |||||| |||||| |||| |||| Sbjct: 185 tagtagacagaggaaaataaagcaaaagttattaccatagtagtggcgagtgaaaaggga 244 Query: 199 gcagcctaaaccgtgaaaacggggttg 225 |||||||||||| |||| ||||||| Sbjct: 245 acagcctaaaccgctaaaatggggttg 271 Score = 147 bits (74), Expect = 3e-32 Identities = 106/117 (90%) Strand = Plus / Plus Query: 292 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 351 |||||||||| |||| |||| ||||||||||| |||| ||||||||||||| |||||| Sbjct: 347 agtccagtagtataaagtatcattagcttatgctttgactcgagtagcatgggacacgtg 406 Query: 352 gaatcccgtgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgacc 408 |||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||| Sbjct: 407 gaatcccgtgtgaatcagcaaggatcaccttgcaaggctaaatactcttgggtgacc 463
>gb|AF482503.1| Chlorokybus atmophyticus 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast genes for chloroplast products Length = 906 Score = 170 bits (86), Expect = 2e-39 Identities = 137/154 (88%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 ||||||||| || |||||||| ||||||||||| |||||| |||||| ||||||||||| Sbjct: 753 aagggcgtactaaccgacgaaacgcttcggggagctgaaaagaagcattgatccggagat 812 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| |||||| |||||| || |||| |||||||||| ||| ||||| |||||||||| Sbjct: 813 tcccgaatagggcaacctcttgaacttcctgctgaattcataggcaggatagagacaacc 872 Query: 121 tggcgaactgaaacatcttagtagccagaggaaa 154 |||||||||||||||||||||||||||||||||| Sbjct: 873 tggcgaactgaaacatcttagtagccagaggaaa 906
>emb|X52737.1|CHCO23S Coleochaete orbicularis chloroplast DNA for transfer RNA-Ala, transfer RNA-Ile and 23S ribosomal RNA Length = 2305 Score = 170 bits (86), Expect = 2e-39 Identities = 194/230 (84%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| ||||||||||||||||||||||| || || ||| ||| ||||| |||| Sbjct: 1819 aagggcgtagtaagcgacgaaatgcttcggggagctgcgaacaagtataaatccgaagat 1878 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| |||||| ||||| || ||| |||| |||| || | |||| ||||| |||| Sbjct: 1879 tcccgaatagggtaacctcttgtactacctgtataatcaataatcaggttagagaaaacc 1938 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 | | ||||||||||||||||||||| ||||||| | |||||||||||||||||| ||||| Sbjct: 1939 tagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgattcccttagta 1998 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 230 | ||||||||||| |||| | ||||||||||| ||| ||||||||||||| Sbjct: 1999 gtggcgagcgaaacgggaaccgcctaaaccgttaaagcggggttgtggga 2048 Score = 101 bits (51), Expect = 2e-18 Identities = 71/78 (91%) Strand = Plus / Plus Query: 334 agtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggctaaa 393 ||||| ||||| |||||| |||||| | |||||||| ||||||||||||| ||||||||| Sbjct: 2152 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 2211 Query: 394 tactcctgggtgaccgat 411 |||||||||||||||||| Sbjct: 2212 tactcctgggtgaccgat 2229
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 168 bits (85), Expect = 9e-39 Identities = 182/212 (85%), Gaps = 3/212 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| ||||||||||||||||||| | || || ||| || | |||||||| Sbjct: 455 aagggcgtagaaagcgacgaaatgcttcggttaactgcgaacaag--taaacccggagat 512 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| |||||| |||||| | ||||||| |||||||| ||| || | ||||||||||| Sbjct: 513 tcccgaatagggcaacctgt-aaactgcttgctgaattcataggcgagtaagagacaacc 571 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 ||| ||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||| Sbjct: 572 tggtgaactgaaacatcttagtaaccagaggaacagaaagcaaaagcgattcccttagta 631 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgt 212 | ||||||||||| |||| ||||||||||||| Sbjct: 632 gtggcgagcgaaacgggaacagcctaaaccgt 663 Score = 87.7 bits (44), Expect = 3e-14 Identities = 73/83 (87%) Strand = Plus / Plus Query: 329 acccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaagg 388 |||||||||||||| |||||||| || | |||||||||||| |||||||||| | |||| Sbjct: 784 acccgagtagcatgaggcacgtgaaacctcgtgtgaatcagcgaggaccacctcgtaagg 843 Query: 389 ctaaatactcctgggtgaccgat 411 |||||||||||| ||||| |||| Sbjct: 844 ctaaatactcctaggtgatcgat 866
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 165 bits (83), Expect = 1e-37 Identities = 169/195 (86%), Gaps = 2/195 (1%) Strand = Plus / Plus Query: 17 acgaaatgcttcggggagttgaaaataagc-atagatccggagattcccaaataggtcaa 75 |||||||||||||||||| || ||| |||| ||| |||||||||||||| |||||| ||| Sbjct: 55 acgaaatgcttcggggagctggaaacaagctata-atccggagattcccgaatagggcaa 113 Query: 76 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 135 ||| || ||| ||| ||||| ||| ||| ||||||||||| || ||| ||||||| Sbjct: 114 cctcttgtactacctattgaattcatagataggaaagagacaacccggtgaattgaaaca 173 Query: 136 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 195 ||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 174 tcttagtagccggaggaaaagaaagcaaacgcgattcccttagtagcggcgagcgaaatg 233 Query: 196 ggagcagcctaaacc 210 ||| ||||||||||| Sbjct: 234 ggaacagcctaaacc 248 Score = 95.6 bits (48), Expect = 1e-16 Identities = 71/79 (89%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggc 389 ||||||||||||||| |||||| |||||||||||||||| |||||||||| | ||||| Sbjct: 377 cccgagtagcatgggacacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaaggc 436 Query: 390 taaatactcctgggtgacc 408 |||||||||||| |||||| Sbjct: 437 taaatactcctgagtgacc 455
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 163 bits (82), Expect = 6e-37 Identities = 178/210 (84%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 ||||||||| || |||||||| ||| |||| || ||| || |||||| ||||||||||| Sbjct: 39 aagggcgtactaatcgacgaaacgctccgggaagctgacaagaagcattgatccggagat 98 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||| |||||| |||||| || |||| | ||||||| || || | |||||||||| Sbjct: 99 ccccgaatagggcaacctcttgaactctccgctgaataaataggcggagcagagacaacc 158 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 ||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 159 tggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccttagta 218 Query: 181 gcggcgagcgaaatgggagcagcctaaacc 210 ||||||||||||| |||| ||| ||||||| Sbjct: 219 gcggcgagcgaaaggggaacagtctaaacc 248 Score = 109 bits (55), Expect = 7e-21 Identities = 75/82 (91%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggc 389 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||| | Sbjct: 378 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 437 Query: 390 taaatactcctgggtgaccgat 411 |||||||||||||||||||||| Sbjct: 438 taaatactcctgggtgaccgat 459
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 163 bits (82), Expect = 6e-37 Identities = 178/210 (84%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 ||||||||| || |||||||| ||| |||| || ||| || |||||| ||||||||||| Sbjct: 115624 aagggcgtactaatcgacgaaacgctccgggaagctgacaagaagcattgatccggagat 115565 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||| |||||| |||||| || |||| | ||||||| || || | |||||||||| Sbjct: 115564 ccccgaatagggcaacctcttgaactctccgctgaataaataggcggagcagagacaacc 115505 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 ||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 115504 tggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccttagta 115445 Query: 181 gcggcgagcgaaatgggagcagcctaaacc 210 ||||||||||||| |||| ||| ||||||| Sbjct: 115444 gcggcgagcgaaaggggaacagtctaaacc 115415 Score = 163 bits (82), Expect = 6e-37 Identities = 178/210 (84%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 ||||||||| || |||||||| ||| |||| || ||| || |||||| ||||||||||| Sbjct: 86364 aagggcgtactaatcgacgaaacgctccgggaagctgacaagaagcattgatccggagat 86423 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 ||| |||||| |||||| || |||| | ||||||| || || | |||||||||| Sbjct: 86424 ccccgaatagggcaacctcttgaactctccgctgaataaataggcggagcagagacaacc 86483 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 ||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 86484 tggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccttagta 86543 Query: 181 gcggcgagcgaaatgggagcagcctaaacc 210 ||||||||||||| |||| ||| ||||||| Sbjct: 86544 gcggcgagcgaaaggggaacagtctaaacc 86573 Score = 109 bits (55), Expect = 7e-21 Identities = 75/82 (91%) Strand = Plus / Minus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggc 389 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||| | Sbjct: 115284 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 115225 Query: 390 taaatactcctgggtgaccgat 411 |||||||||||||||||||||| Sbjct: 115224 taaatactcctgggtgaccgat 115203 Score = 109 bits (55), Expect = 7e-21 Identities = 75/82 (91%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggc 389 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||| | Sbjct: 86704 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 86763 Query: 390 taaatactcctgggtgaccgat 411 |||||||||||||||||||||| Sbjct: 86764 taaatactcctgggtgaccgat 86785
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 161 bits (81), Expect = 2e-36 Identities = 98/104 (94%) Strand = Plus / Plus Query: 305 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 364 |||| |||| ||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 373 aaagtatcattagcttatgctttgacccgagtagcatgggacacgtggaatcccgtgtga 432 Query: 365 atcagnaaggaccaccttgcaaggctaaatactcctgggtgacc 408 ||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 433 atcagcaaggaccaccttgcaaggctaaatactcttgggtgacc 476 Score = 131 bits (66), Expect = 2e-27 Identities = 109/122 (89%), Gaps = 1/122 (0%) Strand = Plus / Plus Query: 104 gcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaa 163 |||| ||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 149 gcagacaagaga-aacctggtgaactgaaacatcttagtagccagaggaaaataaagcaa 207 Query: 164 aagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggt 223 ||| |||||| |||||| ||||||||||| |||| |||||||||||| |||| ||||| Sbjct: 208 aagttattcccatagtagtggcgagcgaaaagggaacagcctaaaccgctaaaatggggt 267 Query: 224 tg 225 || Sbjct: 268 tg 269
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 159 bits (80), Expect = 9e-36 Identities = 98/104 (94%) Strand = Plus / Plus Query: 108 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagc 167 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 147 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaacgc 206 Query: 168 gattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 211 ||||||| ||||||||||||||||| |||| ||||||||||| Sbjct: 207 gattcccttagtagcggcgagcgaagcgggaatagcctaaaccg 250 Score = 127 bits (64), Expect = 3e-26 Identities = 78/83 (93%) Strand = Plus / Plus Query: 329 acccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaagg 388 ||||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||| Sbjct: 373 acccgagtagcatggggcacgtgaaatcccgtgtgaatccgcaaggaccaccttgcaagg 432 Query: 389 ctaaatactcctgggtgaccgat 411 |||||||||||| | |||||||| Sbjct: 433 ctaaatactcctagatgaccgat 455 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Plus Query: 15 cgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 ||||||||||||||||||||||| ||| | || |||||||||||| Sbjct: 66 cgacgaaatgcttcggggagttggaaagaggctgagatccggagat 111
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 157 bits (79), Expect = 3e-35 Identities = 178/211 (84%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||| | || |||||||| |||||| |||| || ||| ||||| ||| ||||||| Sbjct: 32 aagggcgtggaaaccgacgaaacgcttcgaggagctggaaacaagcaatgattcggagat 91 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| |||||| |||||| || ||| ||| ||||| ||| ||| ||||||||||| Sbjct: 92 tcccgaatagggcaacctcttgtacttccttttgaattcatagaaaggaaagagacaacc 151 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 || ||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 152 cggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcgattcccgtagta 211 Query: 181 gcggcgagcgaaatgggagcagcctaaaccg 211 |||||||||||| ||||| ||| |||||||| Sbjct: 212 gcggcgagcgaactgggaacagtctaaaccg 242 Score = 101 bits (51), Expect = 2e-18 Identities = 74/82 (90%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggc 389 |||||||||||||||||||||| ||||||||||||||||| |||||||||| | ||||| Sbjct: 490 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 549 Query: 390 taaatactcctgggtgaccgat 411 |||||||| ||| |||||||| Sbjct: 550 taaatacttttggatgaccgat 571
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 157 bits (79), Expect = 3e-35 Identities = 178/211 (84%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| | |||||| | ||||||||||| || || |||| | |||||| |||| Sbjct: 39 aagggcgtagttaccgacgatacgcttcggggagctggaatcaagctttgatccgaagat 98 Query: 61 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 120 |||| |||||| ||||||| || ||| |||| ||||| ||| |||| ||||||||||| Sbjct: 99 tcccgaatagggcaaccttatatacttcctgttgaattcatagacaggtaagagacaacc 158 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||| |||||||||||||||||| | ||||||||||||||| ||||||||| ||||| Sbjct: 159 cggcgaattgaaacatcttagtagccggtggaaaagaaagcaaacgcgattcccttagta 218 Query: 181 gcggcgagcgaaatgggagcagcctaaaccg 211 | ||||||||||| |||| ||| |||||||| Sbjct: 219 gtggcgagcgaaaagggatcagtctaaaccg 249 Score = 101 bits (51), Expect = 2e-18 Identities = 74/82 (90%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggc 389 |||||||||||||||||||||| |||||||||||||||| |||||||||| | ||| | Sbjct: 371 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaagac 430 Query: 390 taaatactcctgggtgaccgat 411 |||||||||||| ||||||||| Sbjct: 431 taaatactcctgagtgaccgat 452
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 155 bits (78), Expect = 1e-34 Identities = 166/190 (87%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 19 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 77 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 78 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 137 ||| ||||||| |||| | |||||| | || ||||||| |||| |||||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggcgaactgaaacatc 184 Query: 138 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 197 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 198 agcagcctaa 207 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 139 bits (70), Expect = 8e-30 Identities = 105/117 (89%) Strand = Plus / Plus Query: 292 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 351 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 352 gaatcccgtgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgacc 408 |||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||| Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgacc 440
>dbj|AK111146.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-E08, full insert sequence Length = 953 Score = 155 bits (78), Expect = 1e-34 Identities = 78/78 (100%) Strand = Plus / Plus Query: 164 aagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggt 223 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3 aagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggt 62 Query: 224 tgtgggagagcaatacaa 241 |||||||||||||||||| Sbjct: 63 tgtgggagagcaatacaa 80
>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene Length = 4870 Score = 155 bits (78), Expect = 1e-34 Identities = 90/94 (95%) Strand = Plus / Plus Query: 117 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 176 ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| | Sbjct: 1911 aacctggcgaactgaaacatcttagtaaccagaggaaaataaagcaaaagcgattccctt 1970 Query: 177 agtagcggcgagcgaaatgggagcagcctaaacc 210 |||||||||||||||||||||| ||||||||||| Sbjct: 1971 agtagcggcgagcgaaatgggaacagcctaaacc 2004 Score = 101 bits (51), Expect = 2e-18 Identities = 74/82 (90%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggc 389 |||||||||||||||||||||| ||||||||||||||||| |||||||||| | ||||| Sbjct: 2137 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 2196 Query: 390 taaatactcctgggtgaccgat 411 |||||| ||||| |||||||| Sbjct: 2197 taaatattcctgaatgaccgat 2218
>gb|L49156.1|PDICPRGOL Pediastrum biradiatum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 4173 Score = 151 bits (76), Expect = 2e-33 Identities = 94/100 (94%) Strand = Plus / Plus Query: 111 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 170 ||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 147 agagaaaacctggtgaactgaaacatctcagtagccagaggaaaagaaagcaaaagcgat 206 Query: 171 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 210 ||||||||||||||||||||||| ||| ||||||||||| Sbjct: 207 tcccgtagtagcggcgagcgaaacggggccagcctaaacc 246 Score = 109 bits (55), Expect = 7e-21 Identities = 75/82 (91%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggc 389 |||||||||||||||||||||||||||||||||||||| | |||||||||| | ||||| Sbjct: 468 cccgagtagcatggggcacgtggaatcccgtgtgaatctgcgaggaccacctcgtaaggc 527 Query: 390 taaatactcctgggtgaccgat 411 |||||||||||| | ||||||| Sbjct: 528 taaatactcctgagagaccgat 549
>gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2920 Score = 151 bits (76), Expect = 2e-33 Identities = 166/196 (84%) Strand = Plus / Plus Query: 15 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 74 |||||||| ||||||||||| || ||||||| | |||||| |||| ||| |||||| || Sbjct: 45 cgacgaaacgcttcggggagctggcaataagcgttgatccgaagatccccgaatagggca 104 Query: 75 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 134 |||| |||| ||| | ||| ||| || |||||||||| |||| || |||||||||| Sbjct: 105 acctcaagaactacctccctaattcataaggaggcaagagagaacccggtgaactgaaac 164 Query: 135 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 194 |||| ||||||| ||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 165 atctaagtagccggaggaaaagaaagcaaacgcgattcccatagtagcggcgagcgaaaa 224 Query: 195 gggagcagcctaaacc 210 |||| ||||||||||| Sbjct: 225 gggaacagcctaaacc 240 Score = 125 bits (63), Expect = 1e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggc 389 |||||||||||||||||||||| ||||||||||||||||| |||||||||| | ||||| Sbjct: 601 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 660 Query: 390 taaatactcctgggtgaccgat 411 |||||||||||||||||||||| Sbjct: 661 taaatactcctgggtgaccgat 682
>gb|AC137922.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0046A04, complete sequence Length = 141001 Score = 147 bits (74), Expect = 3e-32 Identities = 116/129 (89%), Gaps = 1/129 (0%) Strand = Plus / Plus Query: 284 atggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcatg 342 |||| |||| |||||||||||||||||||||||||||| ||||| |||| |||||||||| Sbjct: 95253 atggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcatg 95312 Query: 343 gggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggctaaatactcctgg 402 || ||||||||||| ||||||| || ||| ||||||||||||||||||||||||||| Sbjct: 95313 ggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctgg 95372 Query: 403 gtgaccgat 411 ||||||||| Sbjct: 95373 gtgaccgat 95381
>gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007C02, complete sequence Length = 148265 Score = 147 bits (74), Expect = 3e-32 Identities = 116/129 (89%), Gaps = 1/129 (0%) Strand = Plus / Minus Query: 284 atggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcatg 342 |||| |||| |||||||||||||||||||||||||||| ||||| |||| |||||||||| Sbjct: 936 atggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcatg 877 Query: 343 gggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggctaaatactcctgg 402 || ||||||||||| ||||||| || ||| ||||||||||||||||||||||||||| Sbjct: 876 ggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctgg 817 Query: 403 gtgaccgat 411 ||||||||| Sbjct: 816 gtgaccgat 808
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 147 bits (74), Expect = 3e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 19 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 77 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 78 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 137 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 138 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 197 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 198 agcagcctaa 207 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 139 bits (70), Expect = 8e-30 Identities = 105/117 (89%) Strand = Plus / Plus Query: 292 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 351 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 352 gaatcccgtgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgacc 408 |||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||| Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgacc 440
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 147 bits (74), Expect = 3e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 19 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 77 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 78 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 137 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 138 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 197 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 198 agcagcctaa 207 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 139 bits (70), Expect = 8e-30 Identities = 105/117 (89%) Strand = Plus / Plus Query: 292 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 351 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 352 gaatcccgtgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgacc 408 |||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||| Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgacc 439
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 147 bits (74), Expect = 3e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 19 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 77 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 78 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 137 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 138 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 197 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 198 agcagcctaa 207 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 139 bits (70), Expect = 8e-30 Identities = 105/117 (89%) Strand = Plus / Plus Query: 292 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 351 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 352 gaatcccgtgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgacc 408 |||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||| Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgacc 440
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 147 bits (74), Expect = 3e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 19 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 77 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 78 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 137 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 138 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 197 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 198 agcagcctaa 207 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 139 bits (70), Expect = 8e-30 Identities = 105/117 (89%) Strand = Plus / Plus Query: 292 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 351 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 352 gaatcccgtgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgacc 408 |||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||| Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgacc 440
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 147 bits (74), Expect = 3e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 19 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 77 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 78 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 137 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 138 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 197 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 198 agcagcctaa 207 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 139 bits (70), Expect = 8e-30 Identities = 105/117 (89%) Strand = Plus / Plus Query: 292 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 351 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 352 gaatcccgtgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgacc 408 |||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||| Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgacc 440
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 147 bits (74), Expect = 3e-32 Identities = 159/182 (87%), Gaps = 4/182 (2%) Strand = Plus / Plus Query: 19 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 77 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 78 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 137 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 138 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 197 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 198 ag 199 || Sbjct: 245 ag 246 Score = 131 bits (66), Expect = 2e-27 Identities = 104/117 (88%) Strand = Plus / Plus Query: 292 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 351 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 352 gaatcccgtgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgacc 408 ||||||| |||||||||| ||||||||||||||||||||| |||||| ||||||||| Sbjct: 384 gaatcccatgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgacc 440
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 147 bits (74), Expect = 3e-32 Identities = 159/182 (87%), Gaps = 4/182 (2%) Strand = Plus / Plus Query: 19 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 77 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 78 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 137 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 138 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 197 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 198 ag 199 || Sbjct: 245 ag 246 Score = 139 bits (70), Expect = 8e-30 Identities = 105/117 (89%) Strand = Plus / Plus Query: 292 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 351 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 352 gaatcccgtgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgacc 408 |||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||| Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgacc 440
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 147 bits (74), Expect = 3e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 19 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 77 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 78 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 137 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 138 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 197 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 198 agcagcctaa 207 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 139 bits (70), Expect = 8e-30 Identities = 105/117 (89%) Strand = Plus / Plus Query: 292 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 351 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 352 gaatcccgtgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgacc 408 |||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||| Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgacc 439
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 147 bits (74), Expect = 3e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 19 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 77 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 78 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 137 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 138 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 197 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 198 agcagcctaa 207 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 139 bits (70), Expect = 8e-30 Identities = 105/117 (89%) Strand = Plus / Plus Query: 292 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 351 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 352 gaatcccgtgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgacc 408 |||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||| Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgacc 440
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 147 bits (74), Expect = 3e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 19 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 77 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 78 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 137 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 138 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 197 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 198 agcagcctaa 207 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 139 bits (70), Expect = 8e-30 Identities = 105/117 (89%) Strand = Plus / Plus Query: 292 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 351 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 352 gaatcccgtgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgacc 408 |||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||| Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgacc 440
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 147 bits (74), Expect = 3e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 19 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 77 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 78 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 137 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 138 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 197 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 198 agcagcctaa 207 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 139 bits (70), Expect = 8e-30 Identities = 105/117 (89%) Strand = Plus / Plus Query: 292 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 351 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 352 gaatcccgtgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgacc 408 |||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||| Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgacc 440
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 147 bits (74), Expect = 3e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 19 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 77 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 78 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 137 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 138 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 197 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 198 agcagcctaa 207 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 139 bits (70), Expect = 8e-30 Identities = 105/117 (89%) Strand = Plus / Plus Query: 292 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 351 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 352 gaatcccgtgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgacc 408 |||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||| Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgacc 440
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 147 bits (74), Expect = 3e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 19 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 77 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 78 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 137 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 138 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 197 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 198 agcagcctaa 207 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 139 bits (70), Expect = 8e-30 Identities = 105/117 (89%) Strand = Plus / Plus Query: 292 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 351 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 352 gaatcccgtgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgacc 408 |||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||| Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgacc 440
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 147 bits (74), Expect = 3e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 19 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 77 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 78 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 137 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 138 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 197 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 198 agcagcctaa 207 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 139 bits (70), Expect = 8e-30 Identities = 105/117 (89%) Strand = Plus / Plus Query: 292 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 351 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 352 gaatcccgtgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgacc 408 |||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||| Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgacc 440
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 147 bits (74), Expect = 3e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 19 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 77 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 78 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 137 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 138 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 197 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 198 agcagcctaa 207 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 139 bits (70), Expect = 8e-30 Identities = 105/117 (89%) Strand = Plus / Plus Query: 292 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 351 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 352 gaatcccgtgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggtgacc 408 |||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||| Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgacc 440
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 147 bits (74), Expect = 3e-32 Identities = 95/102 (93%) Strand = Plus / Plus Query: 110 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 169 ||||||||||| || ||| |||||||||||||||||| ||||||||||||||||| |||| Sbjct: 148 aagagacaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcga 207 Query: 170 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 211 ||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 208 ttcccgtagtagcggcgagcgaactgggaacagcctaaaccg 249 Score = 109 bits (55), Expect = 7e-21 Identities = 75/82 (91%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggc 389 |||||||||||||||||||||| ||||||||||||||| |||||||||| | ||||| Sbjct: 527 cccgagtagcatggggcacgtgaaatcccgtgtgaatccacgaggaccacctcgtaaggc 586 Query: 390 taaatactcctgggtgaccgat 411 |||||||||||||||||||||| Sbjct: 587 taaatactcctgggtgaccgat 608
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 147 bits (74), Expect = 3e-32 Identities = 116/129 (89%), Gaps = 1/129 (0%) Strand = Plus / Plus Query: 284 atggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcatg 342 |||| |||| |||||||||||||||||||||||||||| ||||| |||| |||||||||| Sbjct: 11893526 atggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcatg 11893585 Query: 343 gggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggctaaatactcctgg 402 || ||||||||||| ||||||| || ||| ||||||||||||||||||||||||||| Sbjct: 11893586 ggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctgg 11893645 Query: 403 gtgaccgat 411 ||||||||| Sbjct: 11893646 gtgaccgat 11893654
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 147 bits (74), Expect = 3e-32 Identities = 116/129 (89%), Gaps = 1/129 (0%) Strand = Plus / Plus Query: 284 atggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcatg 342 |||| |||| |||||||||||||||||||||||||||| ||||| |||| |||||||||| Sbjct: 11971933 atggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcatg 11971992 Query: 343 gggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggctaaatactcctgg 402 || ||||||||||| ||||||| || ||| ||||||||||||||||||||||||||| Sbjct: 11971993 ggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctgg 11972052 Query: 403 gtgaccgat 411 ||||||||| Sbjct: 11972053 gtgaccgat 11972061
>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome Length = 161452 Score = 145 bits (73), Expect = 1e-31 Identities = 94/101 (93%) Strand = Plus / Minus Query: 110 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 169 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 156138 aagaggcaacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcga 156079 Query: 170 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 210 |||||| |||||||||||||||||||||| ||||||||||| Sbjct: 156078 ttcccggagtagcggcgagcgaaatgggaacagcctaaacc 156038 Score = 145 bits (73), Expect = 1e-31 Identities = 94/101 (93%) Strand = Plus / Plus Query: 110 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 169 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 77754 aagaggcaacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcga 77813 Query: 170 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 210 |||||| |||||||||||||||||||||| ||||||||||| Sbjct: 77814 ttcccggagtagcggcgagcgaaatgggaacagcctaaacc 77854 Score = 117 bits (59), Expect = 3e-23 Identities = 76/82 (92%) Strand = Plus / Minus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggc 389 ||||||||||||||| |||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 155833 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 155774 Query: 390 taaatactcctgggtgaccgat 411 |||||||||||| ||||||||| Sbjct: 155773 taaatactcctgagtgaccgat 155752 Score = 117 bits (59), Expect = 3e-23 Identities = 76/82 (92%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggc 389 ||||||||||||||| |||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 78059 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 78118 Query: 390 taaatactcctgggtgaccgat 411 |||||||||||| ||||||||| Sbjct: 78119 taaatactcctgagtgaccgat 78140 Score = 42.1 bits (21), Expect = 1.4 Identities = 51/61 (83%) Strand = Plus / Minus Query: 24 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 83 ||||||||||| || || |||||| |||||| |||| ||| |||||| |||||| |||| Sbjct: 156227 gcttcggggagctggtaacaagcatcgatccgaagatccccgaatagggcaacctcttaa 156168 Query: 84 a 84 | Sbjct: 156167 a 156167 Score = 42.1 bits (21), Expect = 1.4 Identities = 51/61 (83%) Strand = Plus / Plus Query: 24 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 83 ||||||||||| || || |||||| |||||| |||| ||| |||||| |||||| |||| Sbjct: 77665 gcttcggggagctggtaacaagcatcgatccgaagatccccgaatagggcaacctcttaa 77724 Query: 84 a 84 | Sbjct: 77725 a 77725
>gb|L43500.1|RTCCPRRNL Carteria olivieri Length = 5667 Score = 145 bits (73), Expect = 1e-31 Identities = 97/105 (92%) Strand = Plus / Plus Query: 106 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 165 |||||||||| |||| || |||||||||||||| ||||||| |||||||||||||||||| Sbjct: 137 aggcaagagagaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaa 196 Query: 166 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 210 ||||||||| |||||||||||||||||| |||| ||||||||||| Sbjct: 197 gcgattcccttagtagcggcgagcgaaaagggaacagcctaaacc 241 Score = 125 bits (63), Expect = 1e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggc 389 |||||||||||||||||||||| ||||||||||||||||| |||||||||| | ||||| Sbjct: 691 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 750 Query: 390 taaatactcctgggtgaccgat 411 |||||||||||||||||||||| Sbjct: 751 taaatactcctgggtgaccgat 772
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 145 bits (73), Expect = 1e-31 Identities = 166/197 (84%) Strand = Plus / Plus Query: 15 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 74 |||||| | ||| ||||||| || || ||||| | ||||||||||||||| ||| || || Sbjct: 53 cgacgatacgctccggggagctggaagtaagcttcgatccggagattcccgaatggggca 112 Query: 75 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 134 |||| ||| |||||||||| ||| ||||| |||| |||| || |||||||||| Sbjct: 113 acctcaaggactccctgctgaattcataggcagggtagaggaaacccggtgaactgaaac 172 Query: 135 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 194 |||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 173 atcttagtagccggaggaaaagaaagcaaacgcgattcccttagtagcggcgagcgaaac 232 Query: 195 gggagcagcctaaaccg 211 |||| |||||||||||| Sbjct: 233 gggaccagcctaaaccg 249 Score = 109 bits (55), Expect = 7e-21 Identities = 75/82 (91%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggc 389 |||||||||||||||||||||| ||||||||||||||||| |||||||||| | ||||| Sbjct: 376 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 435 Query: 390 taaatactcctgggtgaccgat 411 || |||||||| |||||||||| Sbjct: 436 tacatactcctaggtgaccgat 457
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 145 bits (73), Expect = 1e-31 Identities = 88/93 (94%) Strand = Plus / Plus Query: 117 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 176 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 188152 aacctggcgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctt 188211 Query: 177 agtagcggcgagcgaaatgggagcagcctaaac 209 |||||||||||||||| |||| |||||||||| Sbjct: 188212 agtagcggcgagcgaagcgggaacagcctaaac 188244 Score = 145 bits (73), Expect = 1e-31 Identities = 88/93 (94%) Strand = Plus / Plus Query: 117 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 176 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 149709 aacctggcgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctt 149768 Query: 177 agtagcggcgagcgaaatgggagcagcctaaac 209 |||||||||||||||| |||| |||||||||| Sbjct: 149769 agtagcggcgagcgaagcgggaacagcctaaac 149801 Score = 85.7 bits (43), Expect = 1e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 334 agtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggctaaa 393 ||||||| |||||||||| ||||||||||||||||| |||||||||| ||||||||||| Sbjct: 188383 agtagcacggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgcaaggctaaa 188442 Query: 394 ta 395 || Sbjct: 188443 ta 188444 Score = 77.8 bits (39), Expect = 3e-11 Identities = 56/62 (90%) Strand = Plus / Plus Query: 334 agtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggctaaa 393 ||||||| |||||||||| ||||||||||||||||| |||||||||| | ||||||||| Sbjct: 149940 agtagcacggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggctaaa 149999 Query: 394 ta 395 || Sbjct: 150000 ta 150001 Score = 44.1 bits (22), Expect = 0.35 Identities = 49/58 (84%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggag 58 |||||||| || | |||||||| ||| ||||||| || || ||||| ||||||||||| Sbjct: 188036 aagggcgtggctaccgacgaaacgctccggggagctggaagtaagcttagatccggag 188093 Score = 44.1 bits (22), Expect = 0.35 Identities = 49/58 (84%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggag 58 |||||||| || | |||||||| ||| ||||||| || || ||||| ||||||||||| Sbjct: 149593 aagggcgtggctaccgacgaaacgctccggggagctggaagtaagcttagatccggag 149650
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 145 bits (73), Expect = 1e-31 Identities = 88/93 (94%) Strand = Plus / Plus Query: 117 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 176 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 189075 aacctggcgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctt 189134 Query: 177 agtagcggcgagcgaaatgggagcagcctaaac 209 |||||||||||||||| |||| |||||||||| Sbjct: 189135 agtagcggcgagcgaagcgggaacagcctaaac 189167 Score = 145 bits (73), Expect = 1e-31 Identities = 88/93 (94%) Strand = Plus / Plus Query: 117 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 176 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 150502 aacctggcgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctt 150561 Query: 177 agtagcggcgagcgaaatgggagcagcctaaac 209 |||||||||||||||| |||| |||||||||| Sbjct: 150562 agtagcggcgagcgaagcgggaacagcctaaac 150594 Score = 85.7 bits (43), Expect = 1e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 334 agtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggctaaa 393 |||||||||||||||||| ||||||||||||||||| |||||||||| | ||||||||| Sbjct: 189306 agtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggctaaa 189365 Query: 394 ta 395 || Sbjct: 189366 ta 189367 Score = 85.7 bits (43), Expect = 1e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 334 agtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggctaaa 393 |||||||||||||||||| ||||||||||||||||| |||||||||| | ||||||||| Sbjct: 150733 agtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggctaaa 150792 Query: 394 ta 395 || Sbjct: 150793 ta 150794 Score = 44.1 bits (22), Expect = 0.35 Identities = 49/58 (84%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggag 58 |||||||| || | |||||||| ||| ||||||| || || ||||| ||||||||||| Sbjct: 188959 aagggcgtggctaccgacgaaacgctccggggagctggaagtaagcttagatccggag 189016 Score = 44.1 bits (22), Expect = 0.35 Identities = 49/58 (84%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggag 58 |||||||| || | |||||||| ||| ||||||| || || ||||| ||||||||||| Sbjct: 150386 aagggcgtggctaccgacgaaacgctccggggagctggaagtaagcttagatccggag 150443
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 143 bits (72), Expect = 5e-31 Identities = 87/92 (94%) Strand = Plus / Plus Query: 117 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 176 ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| | Sbjct: 148 aacctggcgaattgaaacatcttagtagccagaggaaaagaaagcaaacgcgattccctt 207 Query: 177 agtagcggcgagcgaaatgggagcagcctaaa 208 ||||||||||||||||| |||| ||||||||| Sbjct: 208 agtagcggcgagcgaaacgggaacagcctaaa 239 Score = 85.7 bits (43), Expect = 1e-13 Identities = 72/82 (87%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggc 389 |||||||||| |||| |||||| ||||||| ||||||||| |||||||||| | ||||| Sbjct: 369 cccgagtagcctgggacacgtgaaatcccgggtgaatcagcgaggaccacctcgtaaggc 428 Query: 390 taaatactcctgggtgaccgat 411 ||||||||||| ||||||||| Sbjct: 429 taaatactcctaagtgaccgat 450 Score = 50.1 bits (25), Expect = 0.006 Identities = 52/61 (85%) Strand = Plus / Plus Query: 17 acgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaac 76 |||||||||||||||||| || ||| |||| ||||||||||||||| ||| || |||| Sbjct: 48 acgaaatgcttcggggagctggaaacaagctacgatccggagattcccgaatggggcaac 107 Query: 77 c 77 | Sbjct: 108 c 108
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 143 bits (72), Expect = 5e-31 Identities = 87/92 (94%) Strand = Plus / Plus Query: 117 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 176 ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| | Sbjct: 2029 aacctggcgaattgaaacatcttagtagccagaggaaaagaaagcaaacgcgattccctt 2088 Query: 177 agtagcggcgagcgaaatgggagcagcctaaa 208 ||||||||||||||||| |||| ||||||||| Sbjct: 2089 agtagcggcgagcgaaacgggaacagcctaaa 2120 Score = 85.7 bits (43), Expect = 1e-13 Identities = 72/82 (87%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggc 389 |||||||||| |||| |||||| ||||||| ||||||||| |||||||||| | ||||| Sbjct: 2250 cccgagtagcctgggacacgtgaaatcccgggtgaatcagcgaggaccacctcgtaaggc 2309 Query: 390 taaatactcctgggtgaccgat 411 ||||||||||| ||||||||| Sbjct: 2310 taaatactcctaagtgaccgat 2331 Score = 50.1 bits (25), Expect = 0.006 Identities = 52/61 (85%) Strand = Plus / Plus Query: 17 acgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaac 76 |||||||||||||||||| || ||| |||| ||||||||||||||| ||| || |||| Sbjct: 1929 acgaaatgcttcggggagctggaaacaagctacgatccggagattcccgaatggggcaac 1988 Query: 77 c 77 | Sbjct: 1989 c 1989
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 143 bits (72), Expect = 5e-31 Identities = 74/75 (98%) Strand = Plus / Plus Query: 337 agcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggctaaatac 396 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 60 Query: 397 tcctgggtgaccgat 411 ||||||||||||||| Sbjct: 61 tcctgggtgaccgat 75
>gb|AY155547.1| Cyanothece sp. PCC 8801 23S ribosomal RNA gene, partial sequence Length = 732 Score = 141 bits (71), Expect = 2e-30 Identities = 89/95 (93%) Strand = Plus / Plus Query: 116 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 175 ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 167 caaccgggcgaactgaaacatcttagtagcccgaggaaaagaaagcaaaagcgattcccc 226 Query: 176 tagtagcggcgagcgaaatgggagcagcctaaacc 210 ||||||||||||||||| |||| ||||||||||| Sbjct: 227 cagtagcggcgagcgaaaagggaacagcctaaacc 261 Score = 93.7 bits (47), Expect = 4e-16 Identities = 73/82 (89%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggc 389 ||||||||||| |||||||||||||||||||||||||||| | |||||| | | ||||| Sbjct: 387 cccgagtagcacggggcacgtggaatcccgtgtgaatcagcgaagaccacttcgtaaggc 446 Query: 390 taaatactcctgggtgaccgat 411 |||||||||||| || |||||| Sbjct: 447 taaatactcctgtgtaaccgat 468
>gb|AY333417.1| Microcystis sp. 'Brown' 16S ribosomal RNA gene, partial sequence; tRNA-Ile gene and 16S-23S ribosomal RNA intergenic spacer, complete sequences; and 23S ribosomal RNA gene, partial sequence Length = 3321 Score = 139 bits (70), Expect = 8e-30 Identities = 88/94 (93%) Strand = Plus / Plus Query: 117 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 176 ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1692 aacctggtgaactgaaacatcttagtagccagaggaaaagaaagcaacagcgattccccc 1751 Query: 177 agtagcggcgagcgaaatgggagcagcctaaacc 210 ||||||||||||||||| |||| ||||||||||| Sbjct: 1752 agtagcggcgagcgaaaagggaacagcctaaacc 1785 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatc 367 |||||||||||||||||||||| |||||||||| |||| Sbjct: 1912 cccgagtagcatggggcacgtgaaatcccgtgtaaatc 1949
>gb|L42986.1|RTCCPRGOLA Carteria lunzensis Length = 4448 Score = 139 bits (70), Expect = 8e-30 Identities = 94/102 (92%) Strand = Plus / Plus Query: 110 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 169 ||||| ||||| || ||| |||||||||||||||||| |||||||||||||||||||||| Sbjct: 141 aagaggcaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaaagcga 200 Query: 170 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 211 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 201 ttcccggagtagcggcgagcgaaacgggaacagcctaaaccg 242 Score = 117 bits (59), Expect = 3e-23 Identities = 76/82 (92%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggc 389 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 442 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 501 Query: 390 taaatactcctgggtgaccgat 411 |||||||||||||||||||||| Sbjct: 502 taaatactcctgggtgaccgat 523
>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2864 Score = 139 bits (70), Expect = 8e-30 Identities = 94/102 (92%) Strand = Plus / Plus Query: 110 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 169 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 140 aagaggcaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaagcga 199 Query: 170 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 211 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 200 ttcccggagtagcggcgagcgaaaagggaacagcctaaaccg 241 Score = 101 bits (51), Expect = 2e-18 Identities = 74/82 (90%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggc 389 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 506 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 565 Query: 390 taaatactcctgggtgaccgat 411 |||||||| ||| ||||||||| Sbjct: 566 taaatactactgagtgaccgat 587
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 139 bits (70), Expect = 8e-30 Identities = 88/94 (93%) Strand = Plus / Plus Query: 117 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 176 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 125 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatttcctt 184 Query: 177 agtagcggcgagcgaaatgggagcagcctaaacc 210 ||||| ||||||||||| || | ||||||||||| Sbjct: 185 agtagtggcgagcgaaacggaatcagcctaaacc 218 Score = 97.6 bits (49), Expect = 3e-17 Identities = 78/88 (88%) Strand = Plus / Plus Query: 324 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttg 383 |||| |||||||||||||| |||||||| || | ||||||||||| |||||||||| | Sbjct: 338 ctctaacccgagtagcatgaggcacgtgaaaccttgtgtgaatcagcgaggaccacctcg 397 Query: 384 caaggctaaatactcctgggtgaccgat 411 ||||||||||||||||||||||||||| Sbjct: 398 taaggctaaatactcctgggtgaccgat 425 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcgg 30 |||||||||| ||||||||||| ||||||| Sbjct: 13 aagggcgtagtaagcgacgaaacgcttcgg 42
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 139 bits (70), Expect = 8e-30 Identities = 88/94 (93%) Strand = Plus / Minus Query: 117 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 176 |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| | Sbjct: 2334657 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagaaaactcgattccctt 2334598 Query: 177 agtagcggcgagcgaaatgggagcagcctaaacc 210 ||||||||||||||||| |||| ||||||||||| Sbjct: 2334597 agtagcggcgagcgaaaggggaacagcctaaacc 2334564 Score = 63.9 bits (32), Expect = 4e-07 Identities = 58/67 (86%) Strand = Plus / Minus Query: 345 gcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggctaaatactcctgggt 404 ||||||||||| ||| |||||| | |||||||||| | ||||||||||||||||| || Sbjct: 2334423 gcacgtggaattccggatgaatctgcgaggaccacctcgtaaggctaaatactcctgtgt 2334364 Query: 405 gaccgat 411 ||||||| Sbjct: 2334363 gaccgat 2334357
>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94 Length = 4290 Score = 139 bits (70), Expect = 8e-30 Identities = 88/94 (93%) Strand = Plus / Plus Query: 117 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 176 ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| | | Sbjct: 1718 aacctagcgaactgaaacatcttagtagctagaggaaaagaaagcaaaagcgattctctt 1777 Query: 177 agtagcggcgagcgaaatgggagcagcctaaacc 210 ||||||||||||||||| |||| ||||||||||| Sbjct: 1778 agtagcggcgagcgaaaagggaacagcctaaacc 1811 Score = 56.0 bits (28), Expect = 9e-05 Identities = 60/71 (84%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggc 389 |||||||| ||||| |||||| || ||||| |||||||| |||||||||| | ||||| Sbjct: 1937 cccgagtaatatgggacacgtgaaaccccgtatgaatcagcgaggaccacctcgtaaggc 1996 Query: 390 taaatactcct 400 |||||| |||| Sbjct: 1997 taaatattcct 2007
>gb|L43503.1|CRECPRRNLL Chlamydomonas pallidostigmatica chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CpaI, site-specific DNA endonuclease I-CpaIII, site-specific DNA endonuclease I-CpaIV, site-specific DNA endonuclease I-CpaV genes Length = 8217 Score = 137 bits (69), Expect = 3e-29 Identities = 162/193 (83%) Strand = Plus / Plus Query: 18 cgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacc 77 ||||| ||||||||||| || || |||| | |||||| |||||||| |||||| ||||| Sbjct: 67 cgaaacgcttcggggagctggcaacaagctttgatccgaagattcccgaatagggcaacc 126 Query: 78 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 137 | ||||||| ||| ||| ||| ||| |||||| |||| | ||||||||||||| Sbjct: 127 tattaaacttcctatacaattcatatttaggaaagagagaacccagtgaactgaaacatc 186 Query: 138 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 197 | |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 187 taagtagctggaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaactggg 246 Query: 198 agcagcctaaacc 210 | ||||||||||| Sbjct: 247 atcagcctaaacc 259 Score = 101 bits (51), Expect = 2e-18 Identities = 74/82 (90%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggc 389 ||||||||||||||| |||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 517 cccgagtagcatgggacacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 576 Query: 390 taaatactcctgggtgaccgat 411 |||||||||||| ||||||||| Sbjct: 577 taaatactcctgagtgaccgat 598
>emb|X68899.1|CHCPRRNX1 Chloroplast Chlamydomonas pallidostigmatica rrnL gene, exon 1 Length = 2219 Score = 137 bits (69), Expect = 3e-29 Identities = 162/193 (83%) Strand = Plus / Plus Query: 18 cgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacc 77 ||||| ||||||||||| || || |||| | |||||| |||||||| |||||| ||||| Sbjct: 67 cgaaacgcttcggggagctggcaacaagctttgatccgaagattcccgaatagggcaacc 126 Query: 78 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 137 | ||||||| ||| ||| ||| ||| |||||| |||| | ||||||||||||| Sbjct: 127 tattaaacttcctatacaattcatatttaggaaagagagaacccagtgaactgaaacatc 186 Query: 138 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 197 | |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 187 taagtagctggaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaactggg 246 Query: 198 agcagcctaaacc 210 | ||||||||||| Sbjct: 247 atcagcctaaacc 259 Score = 101 bits (51), Expect = 2e-18 Identities = 74/82 (90%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggc 389 ||||||||||||||| |||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 517 cccgagtagcatgggacacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 576 Query: 390 taaatactcctgggtgaccgat 411 |||||||||||| ||||||||| Sbjct: 577 taaatactcctgagtgaccgat 598
>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2604 Score = 135 bits (68), Expect = 1e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 116 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 175 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 150 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 209 Query: 176 tagtagcggcgagcgaaatgggagcagcctaaaccg 211 |||||||||||||||| |||| |||||||||||| Sbjct: 210 cagtagcggcgagcgaagagggaacagcctaaaccg 245 Score = 111 bits (56), Expect = 2e-21 Identities = 76/83 (91%) Strand = Plus / Plus Query: 329 acccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaagg 388 ||||||||||||||||||||||| ||||||||||||||| | |||||||||| | |||| Sbjct: 365 acccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaagg 424 Query: 389 ctaaatactcctgggtgaccgat 411 |||||||||||||| |||||||| Sbjct: 425 ctaaatactcctggatgaccgat 447 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 252 gctaggcgaagcggttgagtgccgcacc 279 ||||| |||||||||||||| ||||||| Sbjct: 287 gctagacgaagcggttgagttccgcacc 314
>gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2901 Score = 135 bits (68), Expect = 1e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 116 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 175 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 163 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 222 Query: 176 tagtagcggcgagcgaaatgggagcagcctaaaccg 211 |||||||||||||||| |||| |||||||||||| Sbjct: 223 cagtagcggcgagcgaagagggaacagcctaaaccg 258 Score = 111 bits (56), Expect = 2e-21 Identities = 76/83 (91%) Strand = Plus / Plus Query: 329 acccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaagg 388 ||||||||||||||||||||||| ||||||||||||||| | |||||||||| | |||| Sbjct: 378 acccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaagg 437 Query: 389 ctaaatactcctgggtgaccgat 411 |||||||||||||| |||||||| Sbjct: 438 ctaaatactcctggatgaccgat 460 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 252 gctaggcgaagcggttgagtgccgcacc 279 ||||| |||||||||||||| ||||||| Sbjct: 300 gctagacgaagcggttgagttccgcacc 327
>gb|AF393598.1| Klebsormidium flaccidum small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and 5S ribosomal RNA (rrf) gene, partial sequence; chloroplast genes for chloroplast products Length = 7627 Score = 135 bits (68), Expect = 1e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 116 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 175 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 4737 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 4796 Query: 176 tagtagcggcgagcgaaatgggagcagcctaaaccg 211 |||||||||||||||| |||| |||||||||||| Sbjct: 4797 cagtagcggcgagcgaagagggaacagcctaaaccg 4832 Score = 111 bits (56), Expect = 2e-21 Identities = 76/83 (91%) Strand = Plus / Plus Query: 329 acccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaagg 388 ||||||||||||||||||||||| ||||||||||||||| | |||||||||| | |||| Sbjct: 4952 acccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaagg 5011 Query: 389 ctaaatactcctgggtgaccgat 411 |||||||||||||| |||||||| Sbjct: 5012 ctaaatactcctggatgaccgat 5034 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 252 gctaggcgaagcggttgagtgccgcacc 279 ||||| |||||||||||||| ||||||| Sbjct: 4874 gctagacgaagcggttgagttccgcacc 4901
>gb|L43539.1|CRECPRRNL Chlamydomonas sp. (SAG 66.72) chloroplast large subunit ribosomal RNA (rrnL) gene Length = 5575 Score = 133 bits (67), Expect = 5e-28 Identities = 78/82 (95%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggc 389 |||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 509 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 568 Query: 390 taaatactcctgggtgaccgat 411 |||||||||||||||||||||| Sbjct: 569 taaatactcctgggtgaccgat 590 Score = 127 bits (64), Expect = 3e-26 Identities = 91/100 (91%) Strand = Plus / Plus Query: 111 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 170 |||||||||| || ||| ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 159 agagacaacccggtgaattgaaacatcttagtagctggaggaaaagaaagcaaacgcgat 218 Query: 171 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 210 |||||||||||||||||||||| |||| ||||||||||| Sbjct: 219 tcccgtagtagcggcgagcgaaccgggatcagcctaaacc 258
>emb|X68923.1|CHCSRRNX1 Chloroplast Chlamydomonas sp. 66.72 rrnL gene, exon 1 Length = 1218 Score = 133 bits (67), Expect = 5e-28 Identities = 78/82 (95%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggc 389 |||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 509 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 568 Query: 390 taaatactcctgggtgaccgat 411 |||||||||||||||||||||| Sbjct: 569 taaatactcctgggtgaccgat 590 Score = 127 bits (64), Expect = 3e-26 Identities = 91/100 (91%) Strand = Plus / Plus Query: 111 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 170 |||||||||| || ||| ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 159 agagacaacccggtgaattgaaacatcttagtagctggaggaaaagaaagcaaacgcgat 218 Query: 171 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 210 |||||||||||||||||||||| |||| ||||||||||| Sbjct: 219 tcccgtagtagcggcgagcgaaccgggatcagcctaaacc 258
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 131 bits (66), Expect = 2e-27 Identities = 78/82 (95%) Strand = Plus / Plus Query: 129 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 188 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 tgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 219 Query: 189 cgaaatgggagcagcctaaacc 210 |||| ||||| |||||||||| Sbjct: 220 cgaactgggactagcctaaacc 241 Score = 125 bits (63), Expect = 1e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggc 389 ||||||||||||||| |||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 558 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 617 Query: 390 taaatactcctgggtgaccgat 411 |||||||||||||||||||||| Sbjct: 618 taaatactcctgggtgaccgat 639
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 131 bits (66), Expect = 2e-27 Identities = 93/102 (91%) Strand = Plus / Plus Query: 110 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 169 |||||| |||| || ||| ||||||||||||||| || ||||||||||||||||| |||| Sbjct: 148 aagagataacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaacgcga 207 Query: 170 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 211 ||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 208 ttcccttagtagcggcgagcgaaatgggaacagcctaaaccg 249 Score = 109 bits (55), Expect = 7e-21 Identities = 75/82 (91%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggc 389 |||||||||||||||||||||| |||||||||||||||| |||||||||| | ||||| Sbjct: 446 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaaggc 505 Query: 390 taaatactcctgggtgaccgat 411 |||||||||||| ||||||||| Sbjct: 506 taaatactcctgagtgaccgat 527
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 131 bits (66), Expect = 2e-27 Identities = 84/90 (93%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||| ||||||||| |||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 24063451 aaggacgtagcaagagacgaaatgctttggggagttgaaaataatcatagatccggagat 24063392 Query: 61 tcccaaataggtcaaccttttaaactgcct 90 |||||||||||||||| |||| |||||||| Sbjct: 24063391 tcccaaataggtcaacattttgaactgcct 24063362
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 131 bits (66), Expect = 2e-27 Identities = 84/90 (93%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||| ||||||||| |||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 23991657 aaggacgtagcaagagacgaaatgctttggggagttgaaaataatcatagatccggagat 23991598 Query: 61 tcccaaataggtcaaccttttaaactgcct 90 |||||||||||||||| |||| |||||||| Sbjct: 23991597 tcccaaataggtcaacattttgaactgcct 23991568
>emb|AL928774.3|CNS08CC4 Oryza sativa chromosome 12, . BAC OSJNBa0078O17 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 176388 Score = 131 bits (66), Expect = 2e-27 Identities = 84/90 (93%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||| ||||||||| |||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 23945 aaggacgtagcaagagacgaaatgctttggggagttgaaaataatcatagatccggagat 24004 Query: 61 tcccaaataggtcaaccttttaaactgcct 90 |||||||||||||||| |||| |||||||| Sbjct: 24005 tcccaaataggtcaacattttgaactgcct 24034
>gb|L49155.1|NEHCPRGOLA Neochloris aquatica chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5569 Score = 129 bits (65), Expect = 8e-27 Identities = 83/89 (93%) Strand = Plus / Plus Query: 110 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 169 ||||| |||||||| |||||||||||||| ||||||||||||| ||||| |||||||||| Sbjct: 148 aagaggcaacctggtgaactgaaacatctcagtagccagaggagaagaacgcaaaagcga 207 Query: 170 ttcccgtagtagcggcgagcgaaatggga 198 ||||| ||||||||||||||||||||||| Sbjct: 208 ttcccttagtagcggcgagcgaaatggga 236 Score = 109 bits (55), Expect = 7e-21 Identities = 75/82 (91%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggc 389 |||||||||||||||||||||||||||||||||||||||| |||||||||| | ||| | Sbjct: 517 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagac 576 Query: 390 taaatactcctgggtgaccgat 411 |||||||||||| | ||||||| Sbjct: 577 taaatactcctgagagaccgat 598
>dbj|AP006654.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT31E21, TM0340, complete sequence Length = 120480 Score = 129 bits (65), Expect = 8e-27 Identities = 94/104 (90%) Strand = Plus / Plus Query: 294 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 353 ||||||| ||||||||||||||| ||||||||||||||||||||||| ||||| ||||| Sbjct: 83382 tccagtacacgaaagcatcactagtttatgctctgacccgagtagcatagggcatgtgga 83441 Query: 354 atcccgtgtgaatcagnaaggaccaccttgcaaggctaaatact 397 ||| ||||||||| || |||||||||||| ||||||||||||| Sbjct: 83442 atctcgtgtgaattagtaaggaccaccttttaaggctaaatact 83485
>gb|AY673996.1| Gracilaria tenuistipitata var. liui chloroplast, complete genome Length = 183883 Score = 127 bits (64), Expect = 3e-26 Identities = 115/132 (87%) Strand = Plus / Minus Query: 79 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 138 |||| ||| ||| |||||| ||| || ||||||||| ||| |||||||||||||||||| Sbjct: 27704 tttatactacctactgaattcataagtaggcaagagctaacttggcgaactgaaacatct 27645 Query: 139 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 198 ||||||||| |||||||||||||||| ||||||| | |||||| ||||| ||||| |||| Sbjct: 27644 tagtagccaaaggaaaagaaagcaaacgcgattctcttagtagtggcgaacgaaaaggga 27585 Query: 199 gcagcctaaacc 210 ||||||||||| Sbjct: 27584 acagcctaaacc 27573 Score = 46.1 bits (23), Expect = 0.090 Identities = 52/62 (83%) Strand = Plus / Minus Query: 334 agtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggctaaa 393 |||||||| ||||||||| || || ||||||||| |||||||||| | ||||||||| Sbjct: 27436 agtagcatagggcacgtgaaacccagtgtgaatccacgaggaccacctcgtaaggctaaa 27377 Query: 394 ta 395 || Sbjct: 27376 ta 27375
>gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3334 Score = 127 bits (64), Expect = 3e-26 Identities = 82/88 (93%) Strand = Plus / Plus Query: 123 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 182 ||||| ||||||||||||||||| |||||||| |||||||||||||||||| ||||||| Sbjct: 161 gcgaattgaaacatcttagtagctggaggaaaaaaaagcaaaagcgattcccttagtagc 220 Query: 183 ggcgagcgaaatgggagcagcctaaacc 210 |||||||||||||||| ||||||||||| Sbjct: 221 ggcgagcgaaatgggaacagcctaaacc 248 Score = 99.6 bits (50), Expect = 7e-18 Identities = 73/81 (90%) Strand = Plus / Plus Query: 331 ccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggct 390 ||||||||||||||||||||| ||||||||||||||| | |||||||||| | |||||| Sbjct: 382 ccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggct 441 Query: 391 aaatactcctgggtgaccgat 411 ||||||||||| || |||||| Sbjct: 442 aaatactcctgagtcaccgat 462
>gb|L43541.1|PDWCPRRNL Pedinomonas tuberculata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3875 Score = 127 bits (64), Expect = 3e-26 Identities = 85/92 (92%) Strand = Plus / Plus Query: 117 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 176 ||||||| ||| ||||||||||||||| |||||||||||||||||||| ||||||||| | Sbjct: 149 aacctggtgaattgaaacatcttagtaaccagaggaaaagaaagcaaacgcgattccctt 208 Query: 177 agtagcggcgagcgaaatgggagcagcctaaa 208 ||||||||||||||||| |||| ||||||||| Sbjct: 209 agtagcggcgagcgaaacgggaacagcctaaa 240 Score = 85.7 bits (43), Expect = 1e-13 Identities = 72/82 (87%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggc 389 |||||||||| |||| |||||| ||||||| ||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcctgggacacgtgaaatcccgggtgaatcagcgaggaccacctcgtaaggc 430 Query: 390 taaatactcctgggtgaccgat 411 ||||||||||| | |||||||| Sbjct: 431 taaatactcctagatgaccgat 452
>gb|DQ313018.1| Uncultured bacterium clone 3P12F 23S ribosomal RNA gene, partial sequence Length = 798 Score = 127 bits (64), Expect = 3e-26 Identities = 79/84 (94%) Strand = Plus / Plus Query: 125 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 184 ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 8 gaactgaaacatcttagtagccaaaggaaaagaaagcaaaagcgattcccaaagtagcgg 67 Query: 185 cgagcgaaatgggagcagcctaaa 208 |||||| ||||||| ||||||||| Sbjct: 68 cgagcggaatgggaacagcctaaa 91 Score = 63.9 bits (32), Expect = 4e-07 Identities = 61/71 (85%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggc 389 ||||||||| ||||| |||||| |||||||| ||||| | |||||||||| | ||||| Sbjct: 235 cccgagtagtatgggacacgtgaaatcccgtatgaatttgcgaggaccacctcgtaaggc 294 Query: 390 taaatactcct 400 ||||||||||| Sbjct: 295 taaatactcct 305
>gb|DQ312920.1| Uncultured bacterium clone 3M10C 23S ribosomal RNA gene, partial sequence Length = 798 Score = 127 bits (64), Expect = 3e-26 Identities = 79/84 (94%) Strand = Plus / Plus Query: 125 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 184 ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 8 gaactgaaacatcttagtagccaaaggaaaagaaagcaaaagcgattcccaaagtagcgg 67 Query: 185 cgagcgaaatgggagcagcctaaa 208 |||||| ||||||| ||||||||| Sbjct: 68 cgagcggaatgggaacagcctaaa 91 Score = 63.9 bits (32), Expect = 4e-07 Identities = 61/71 (85%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggc 389 ||||||||| ||||| |||||| |||||||| ||||| | |||||||||| | ||||| Sbjct: 235 cccgagtagtatgggacacgtgaaatcccgtatgaatttgcgaggaccacctcgtaaggc 294 Query: 390 taaatactcct 400 ||||||||||| Sbjct: 295 taaatactcct 305
>gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and putative site-specific DNA endonuclease (orf167) gene, complete cds; chloroplast genes for chloroplast products Length = 5476 Score = 127 bits (64), Expect = 3e-26 Identities = 82/88 (93%) Strand = Plus / Plus Query: 123 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 182 ||||| ||||||||||||||||| |||||||| |||||||||||||||||| ||||||| Sbjct: 1898 gcgaattgaaacatcttagtagctggaggaaaaaaaagcaaaagcgattcccttagtagc 1957 Query: 183 ggcgagcgaaatgggagcagcctaaacc 210 |||||||||||||||| ||||||||||| Sbjct: 1958 ggcgagcgaaatgggaacagcctaaacc 1985 Score = 101 bits (51), Expect = 2e-18 Identities = 74/82 (90%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggc 389 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 2119 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 2178 Query: 390 taaatactcctgggtgaccgat 411 |||||||||||| || |||||| Sbjct: 2179 taaatactcctgagtcaccgat 2200
>gb|AF141148.1|AF141148 Vigna unguiculata clone VU53KNF3-2 16S ribsomal RNA gene; partial sequence, tRNA-Ile gene; complete sequence, and 18S ribosomal RNA gene; partial sequence; chloroplast genes for chloroplast products Length = 387 Score = 127 bits (64), Expect = 3e-26 Identities = 93/100 (93%), Gaps = 2/100 (2%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 107 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagat 48 Query: 61 tccc-aaataggtcaaccttttaaactgcctgctgaatcc 99 |||| | |||||||||||||| ||||| ||||||||||| Sbjct: 47 tcccgatataggtcaacctttcgaactg-ctgctgaatcc 9
>gb|AF142335.1|AF142335 Vigna vexillata clone TVBA27 putative ribosomal RNA genomic sequence Length = 383 Score = 127 bits (64), Expect = 3e-26 Identities = 93/100 (93%), Gaps = 2/100 (2%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 60 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 101 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagat 42 Query: 61 tccc-aaataggtcaaccttttaaactgcctgctgaatcc 99 |||| | |||||||||||||| ||||| ||||||||||| Sbjct: 41 tcccgatataggtcaacctttcgaactg-ctgctgaatcc 3
>gb|AY286123.1| Cyanidioschyzon merolae DBV201 chloroplast, complete genome Length = 149705 Score = 125 bits (63), Expect = 1e-25 Identities = 88/95 (92%), Gaps = 1/95 (1%) Strand = Plus / Minus Query: 117 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc-g 175 ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 45899 aacctagcgaactgaaacatcttagtagctagaggaaaagaaagcaaaagcgattcccac 45840 Query: 176 tagtagcggcgagcgaaatgggagcagcctaaacc 210 |||||| ||||||||||| |||| ||||||||||| Sbjct: 45839 tagtagtggcgagcgaaaggggaacagcctaaacc 45805 Score = 48.1 bits (24), Expect = 0.023 Identities = 59/71 (83%) Strand = Plus / Minus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggc 389 ||||||||| ||||| |||||| || ||||| |||||| | || ||||||| | ||||| Sbjct: 45676 cccgagtagtatgggacacgtgaaaccccgtatgaatctgcgagcaccacctcgtaaggc 45617 Query: 390 taaatactcct 400 |||||| |||| Sbjct: 45616 taaatattcct 45606
>gb|AY389861.1| Uncultured chlorophyte large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 750 Score = 125 bits (63), Expect = 1e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggc 389 ||||||||||||||| |||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 4 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 63 Query: 390 taaatactcctgggtgaccgat 411 |||||||||||||||||||||| Sbjct: 64 taaatactcctgggtgaccgat 85
>gb|L43540.1|DUNCPRRNL Dunaliella parva Length = 5685 Score = 125 bits (63), Expect = 1e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggc 389 ||||||||||||||| |||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 406 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 465 Query: 390 taaatactcctgggtgaccgat 411 |||||||||||||||||||||| Sbjct: 466 taaatactcctgggtgaccgat 487 Score = 115 bits (58), Expect = 1e-22 Identities = 76/82 (92%) Strand = Plus / Plus Query: 129 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 188 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 160 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 219 Query: 189 cgaaatgggagcagcctaaacc 210 |||| |||| ||||||||||| Sbjct: 220 cgaaccgggaacagcctaaacc 241
>gb|L43353.1|CRECPRRNLD Chlamydomonas geitleri chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4406 Score = 125 bits (63), Expect = 1e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggc 389 ||||||||||||||| |||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 380 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 439 Query: 390 taaatactcctgggtgaccgat 411 |||||||||||||||||||||| Sbjct: 440 taaatactcctgggtgaccgat 461 Score = 119 bits (60), Expect = 7e-24 Identities = 90/100 (90%) Strand = Plus / Plus Query: 111 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 170 |||||||||| || ||| ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 159 agagacaacccggtgaattgaaacatcttagtagctggaggaaaagaaagcaaacgcgat 218 Query: 171 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 210 |||||||||||||||||||||| |||| |||||||||| Sbjct: 219 tcccgtagtagcggcgagcgaaccgggattagcctaaacc 258
>gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3978 Score = 125 bits (63), Expect = 1e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggc 389 |||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 412 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 471 Query: 390 taaatactcctgggtgaccgat 411 |||||||||||| ||||||||| Sbjct: 472 taaatactcctgagtgaccgat 493 Score = 123 bits (62), Expect = 5e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 129 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 188 ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaataaagcaaaagcgattcccgtagtagcggcgag 218 Query: 189 cgaaatgggagcagcctaaacc 210 ||||| |||| ||||||||||| Sbjct: 219 cgaaacgggaacagcctaaacc 240
>gb|L44123.1|CMJCPRGOL Chlorococcum echinozygotum chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CecI gene Length = 7283 Score = 125 bits (63), Expect = 1e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggc 389 ||||||||||||||| |||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 635 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 694 Query: 390 taaatactcctgggtgaccgat 411 |||||||||||||||||||||| Sbjct: 695 taaatactcctgggtgaccgat 716 Score = 103 bits (52), Expect = 4e-19 Identities = 88/100 (88%) Strand = Plus / Plus Query: 111 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 170 |||||||||| | ||| ||||||||||||||| | | ||||||||||||||| ||||| Sbjct: 141 agagacaacccagtgaattgaaacatcttagtaactggcggaaaagaaagcaaacgcgat 200 Query: 171 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 210 |||||||||||||||||||||| |||| ||||||||||| Sbjct: 201 tcccgtagtagcggcgagcgaaccgggaacagcctaaacc 240
>gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CelI gene Length = 3779 Score = 125 bits (63), Expect = 1e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggc 389 ||||||||||||||| |||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 409 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 468 Query: 390 taaatactcctgggtgaccgat 411 |||||||||||||||||||||| Sbjct: 469 taaatactcctgggtgaccgat 490 Score = 123 bits (62), Expect = 5e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 129 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 188 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 tgaaacatcttagtagctggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 223 Query: 189 cgaaatgggagcagcctaaacc 210 |||| |||| ||||||||||| Sbjct: 224 cgaaccgggaacagcctaaacc 245
>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3397 Score = 125 bits (63), Expect = 1e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggc 389 ||||||||||||||| |||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 567 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 626 Query: 390 taaatactcctgggtgaccgat 411 |||||||||||||||||||||| Sbjct: 627 taaatactcctgggtgaccgat 648 Score = 119 bits (60), Expect = 7e-24 Identities = 90/100 (90%) Strand = Plus / Plus Query: 111 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 170 |||||||||| | ||| ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 140 agagacaacccagtgaattgaaacatcttagtagctggaggaaaagaaagcaaacgcgat 199 Query: 171 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 210 |||||||||||||||||||||| |||| ||||||||||| Sbjct: 200 tcccgtagtagcggcgagcgaaccgggatcagcctaaacc 239
>gb|L42993.1|URMCPRGOL Uronema belkae large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2619 Score = 125 bits (63), Expect = 1e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggc 389 |||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 390 taaatactcctgggtgaccgat 411 |||||||||||| ||||||||| Sbjct: 431 taaatactcctgagtgaccgat 452 Score = 109 bits (55), Expect = 7e-21 Identities = 76/83 (91%) Strand = Plus / Plus Query: 110 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 169 ||||||||||| || ||| ||||||||||||||| || |||||||||||||||||||||| Sbjct: 140 aagagacaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaaagcga 199 Query: 170 ttcccgtagtagcggcgagcgaa 192 || || ||||||||||||||||| Sbjct: 200 tttccttagtagcggcgagcgaa 222
>emb|X68893.1|CHCIRRNX1 Chloroplast Chlamydomonas indica rrnL gene, exon 1 Length = 810 Score = 125 bits (63), Expect = 1e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggc 389 ||||||||||||||| |||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 447 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 506 Query: 390 taaatactcctgggtgaccgat 411 |||||||||||||||||||||| Sbjct: 507 taaatactcctgggtgaccgat 528 Score = 111 bits (56), Expect = 2e-21 Identities = 89/100 (89%) Strand = Plus / Plus Query: 111 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 170 |||||||||| | ||| ||||||||||||||| | | ||||||||||||||||||||| Sbjct: 159 agagacaacccagtgaattgaaacatcttagtaactggcggaaaagaaagcaaaagcgat 218 Query: 171 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 210 |||||||||||||||||||||| |||| ||||||||||| Sbjct: 219 tcccgtagtagcggcgagcgaaccgggaacagcctaaacc 258
>emb|X68891.1|CHCGRRNL1 Chloroplast Chlamydomonas geitleri rrnL gene, exon 1 Length = 1964 Score = 125 bits (63), Expect = 1e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggc 389 ||||||||||||||| |||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 380 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 439 Query: 390 taaatactcctgggtgaccgat 411 |||||||||||||||||||||| Sbjct: 440 taaatactcctgggtgaccgat 461 Score = 119 bits (60), Expect = 7e-24 Identities = 90/100 (90%) Strand = Plus / Plus Query: 111 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 170 |||||||||| || ||| ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 159 agagacaacccggtgaattgaaacatcttagtagctggaggaaaagaaagcaaacgcgat 218 Query: 171 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 210 |||||||||||||||||||||| |||| |||||||||| Sbjct: 219 tcccgtagtagcggcgagcgaaccgggattagcctaaacc 258
>emb|X68913.1|CHCMRRNX1 Chloroplast C.moewusii rrnL gene, exon 1 Length = 1119 Score = 125 bits (63), Expect = 1e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggc 389 ||||||||||||||| |||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 524 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 583 Query: 390 taaatactcctgggtgaccgat 411 |||||||||||||||||||||| Sbjct: 584 taaatactcctgggtgaccgat 605 Score = 111 bits (56), Expect = 2e-21 Identities = 89/100 (89%) Strand = Plus / Plus Query: 111 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 170 |||||||||| | ||| ||||||||||||||| | | ||||||||||||||||||||| Sbjct: 159 agagacaacccagtgaattgaaacatcttagtaactggcggaaaagaaagcaaaagcgat 218 Query: 171 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 210 |||||||||||||||||||||| |||| ||||||||||| Sbjct: 219 tcccgtagtagcggcgagcgaaccgggaacagcctaaacc 258
>dbj|AB002583.1| Cyanidioschyzon merolae chloroplast DNA, complete genome, strain:10D Length = 149987 Score = 125 bits (63), Expect = 1e-25 Identities = 88/95 (92%), Gaps = 1/95 (1%) Strand = Plus / Plus Query: 117 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc-g 175 ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 19480 aacctagcgaactgaaacatcttagtagctagaggaaaagaaagcaaaagcgattcccac 19539 Query: 176 tagtagcggcgagcgaaatgggagcagcctaaacc 210 |||||| ||||||||||| |||| ||||||||||| Sbjct: 19540 tagtagtggcgagcgaaaggggaacagcctaaacc 19574 Score = 48.1 bits (24), Expect = 0.023 Identities = 59/71 (83%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagnaaggaccaccttgcaaggc 389 ||||||||| ||||| |||||| || ||||| |||||| | || ||||||| | ||||| Sbjct: 19703 cccgagtagtatgggacacgtgaaaccccgtatgaatctgcgagcaccacctcgtaaggc 19762 Query: 390 taaatactcct 400 |||||| |||| Sbjct: 19763 taaatattcct 19773
>dbj|AP006646.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT04I09, TM0269b, complete sequence Length = 66087 Score = 125 bits (63), Expect = 1e-25 Identities = 63/63 (100%) Strand = Plus / Plus Query: 105 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43316 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 43375 Query: 165 agc 167 ||| Sbjct: 43376 agc 43378 Score = 107 bits (54), Expect = 3e-20 Identities = 57/58 (98%) Strand = Plus / Plus Query: 105 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 162 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 40844 caggcaagagataacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 40901 Score = 63.9 bits (32), Expect = 4e-07 Identities = 54/60 (90%), Gaps = 1/60 (1%) Strand = Plus / Minus Query: 51 atccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggca 110 |||||||||||||| ||||||||||||||| |||| |||||||||||||| ||||||| Sbjct: 63009 atccggagattcccgaataggtcaacctttcgaact-actgctgaatccatgggcaggca 62951 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,740,187 Number of Sequences: 3902068 Number of extensions: 2740187 Number of successful extensions: 68779 Number of sequences better than 10.0: 4675 Number of HSP's better than 10.0 without gapping: 4584 Number of HSP's successfully gapped in prelim test: 114 Number of HSP's that attempted gapping in prelim test: 56993 Number of HSP's gapped (non-prelim): 11276 length of query: 413 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 391 effective length of database: 17,147,199,772 effective search space: 6704555110852 effective search space used: 6704555110852 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)