>UBC4_WHEAT (P16577) Ubiquitin-conjugating enzyme E2-23 kDa (EC 6.3.2.19)|
           (Ubiquitin-protein ligase) (Ubiquitin carrier protein)
          Length = 184

 Score = 60.8 bits (146), Expect(2) = 2e-13
 Identities = 26/29 (89%), Positives = 26/29 (89%)
 Frame = +3

Query: 258 MMSDYKVDMINDGMQEFFVHFHGPNDSTY 344
           MMSDYKVDMINDGM EFFVHFHGP DS Y
Sbjct: 16  MMSDYKVDMINDGMHEFFVHFHGPKDSIY 44



 Score = 33.1 bits (74), Expect(2) = 2e-13
 Identities = 16/21 (76%), Positives = 17/21 (80%)
 Frame = +2

Query: 113 MSSPSKRREMDLMKLSAAPTK 175
           MSSPSKRREMDLMKL  +  K
Sbjct: 1   MSSPSKRREMDLMKLMMSDYK 21

>UBC5_ARATH (P42749) Ubiquitin-conjugating enzyme E2-21 kDa 2 (EC 6.3.2.19)|
           (Ubiquitin-protein ligase 5) (Ubiquitin carrier protein
           5)
          Length = 185

 Score = 54.7 bits (130), Expect(2) = 1e-11
 Identities = 24/29 (82%), Positives = 25/29 (86%)
 Frame = +3

Query: 258 MMSDYKVDMINDGMQEFFVHFHGPNDSTY 344
           MMSDYKV+MINDGMQEFFV F GP DS Y
Sbjct: 16  MMSDYKVEMINDGMQEFFVEFSGPKDSIY 44



 Score = 33.1 bits (74), Expect(2) = 1e-11
 Identities = 16/21 (76%), Positives = 17/21 (80%)
 Frame = +2

Query: 113 MSSPSKRREMDLMKLSAAPTK 175
           MSSPSKRREMDLMKL  +  K
Sbjct: 1   MSSPSKRREMDLMKLMMSDYK 21

>UBC4_ARATH (P42748) Ubiquitin-conjugating enzyme E2-21 kDa 1 (EC 6.3.2.19)|
           (Ubiquitin-protein ligase 4) (Ubiquitin carrier protein
           4)
          Length = 187

 Score = 52.0 bits (123), Expect(2) = 1e-10
 Identities = 22/29 (75%), Positives = 25/29 (86%)
 Frame = +3

Query: 258 MMSDYKVDMINDGMQEFFVHFHGPNDSTY 344
           MMSDYKV+ INDGMQEF+V F+GP DS Y
Sbjct: 16  MMSDYKVETINDGMQEFYVEFNGPKDSLY 44



 Score = 32.3 bits (72), Expect(2) = 1e-10
 Identities = 15/21 (71%), Positives = 17/21 (80%)
 Frame = +2

Query: 113 MSSPSKRREMDLMKLSAAPTK 175
           MSSPSKRREMD+MKL  +  K
Sbjct: 1   MSSPSKRREMDMMKLMMSDYK 21

>UBC6_ARATH (P42750) Ubiquitin-conjugating enzyme E2-21 kDa 3 (EC 6.3.2.19)|
           (Ubiquitin-protein ligase 6) (Ubiquitin carrier protein
           6)
          Length = 183

 Score = 48.9 bits (115), Expect(2) = 2e-09
 Identities = 21/41 (51%), Positives = 26/41 (63%)
 Frame = +3

Query: 258 MMSDYKVDMINDGMQEFFVHFHGPNDSTYPSASLSLSNPVP 380
           MMSDYKVD +ND +Q F+V FHGP DS Y      +   +P
Sbjct: 16  MMSDYKVDTVNDDLQMFYVTFHGPTDSLYQGGVWKIKVELP 56



 Score = 31.2 bits (69), Expect(2) = 2e-09
 Identities = 14/21 (66%), Positives = 17/21 (80%)
 Frame = +2

Query: 113 MSSPSKRREMDLMKLSAAPTK 175
           M+SPSKRREMD+MKL  +  K
Sbjct: 1   MASPSKRREMDMMKLMMSDYK 21

>UBC8_YEAST (P28263) Ubiquitin-conjugating enzyme E2-24 kDa (EC 6.3.2.19)|
           (Ubiquitin-protein ligase) (Ubiquitin carrier protein)
           (Glucose-induced degradation protein 3)
          Length = 218

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 20/41 (48%), Positives = 27/41 (65%)
 Frame = +3

Query: 258 MMSDYKVDMINDGMQEFFVHFHGPNDSTYPSASLSLSNPVP 380
           +MSD++VD+IND MQEF V F GP D+ Y +    L   +P
Sbjct: 16  LMSDHQVDLINDSMQEFHVKFLGPKDTPYENGVWRLHVELP 56

>RIMM_ANASP (Q8YTB1) Probable 16S rRNA-processing protein rimM|
          Length = 246

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +3

Query: 57  GRKEGSKKQASRGRRRREPCLPQASGGRWIS*SCQQPLPNP 179
           GR +G KKQ  +GR+ R+       G +    S Q P+PNP
Sbjct: 19  GRGQGEKKQGKQGRQGRQ----GRQGEKSPVPSPQSPIPNP 55

>G6PI_GEOSL (Q74DK5) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)|
           (Phosphoglucose isomerase) (PGI) (Phosphohexose
           isomerase) (PHI)
          Length = 529

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -3

Query: 385 GAGTGLEREREAEGYVLSFGPWKW 314
           GAG+ L+R  EA G++  F  W W
Sbjct: 212 GAGSELDRTAEAGGWLCRFPMWDW 235


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,481,148
Number of Sequences: 219361
Number of extensions: 532304
Number of successful extensions: 1640
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1640
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2169600302
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)