>PERT_MOUSE (P35419) Thyroid peroxidase precursor (EC 1.11.1.8) (TPO)|
          Length = 914

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +2

Query: 128 CTHGWRRRGSEWW*CTKPLWDPAATAHKDVGEQA 229
           C HG++ +G E   CT+  WD      KDV E A
Sbjct: 756 CFHGYKLQGQEQVTCTQKGWDSEPPVCKDVNECA 789

>ZIMP7_HUMAN (Q8NF64) PIAS-like protein Zimp7|
          Length = 920

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 20/42 (47%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = +3

Query: 240 GRETQKYVLG-PAGPSTSPCGSAATSGVVFFLACSALISAPC 362
           G  TQ  VLG P GP+ SP GS+   GV      SAL S  C
Sbjct: 49  GNATQSQVLGNPMGPAGSPSGSSMMPGVAG--GSSALTSPQC 88

>Y110_TREPA (O83148) Hypothetical protein TP0110|
          Length = 577

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +2

Query: 86  WRPEARAGGEN-FNLCTHGWRRRGSEWW*CTKPLWDPA 196
           W+P A AGGE+ F L    W++R +E W     LW  A
Sbjct: 330 WQPRAIAGGEDWFVLFKKAWKKRFNEKW----ALWSTA 363

>PERT_RAT (P14650) Thyroid peroxidase precursor (EC 1.11.1.8) (TPO)|
          Length = 914

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +2

Query: 128 CTHGWRRRGSEWW*CTKPLWDPAATAHKDVGEQA 229
           C HG++ +G E   CT+  WD      KDV E A
Sbjct: 756 CFHGYKLQGQEQVTCTQNGWDSEPPVCKDVNECA 789

>PERT_HUMAN (P07202) Thyroid peroxidase precursor (EC 1.11.1.8) (TPO)|
          Length = 933

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = +2

Query: 128 CTHGWRRRGSEWW*CTKPLWDPAATAHKDVGEQAAG 235
           C HG+  +G E   CT+  WD      KDV E A G
Sbjct: 768 CRHGYELQGREQLTCTQEGWDFQPPLCKDVNECADG 803


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,329,638
Number of Sequences: 219361
Number of extensions: 1234607
Number of successful extensions: 3620
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3619
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4315578075
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)