ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | basd20f15 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9 Length = 875 Score = 220 bits (111), Expect = 8e-55 Identities = 132/141 (93%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgaggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 191 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgaggg 250 Query: 61 catcaagaagttcgagaccctgngntacttgccaccactcannncngaggccctccttaa 120 |||||||||||||||||||||| ||||||||||| |||| | ||||||||||| || Sbjct: 251 catcaagaagttcgagaccctgtcttacttgccaccgctcaccacggaggccctcctcaa 310 Query: 121 gcaggtcgactacctgatccg 141 ||||||||||||||||||||| Sbjct: 311 gcaggtcgactacctgatccg 331
>emb|X00235.1|TARUB2 Wheat mRNA fragment for small subunit precursor of RuBPCase (EC 4.1.1.39 ribulosebisphosphate carboxylase) clones 234 and 406 Length = 743 Score = 212 bits (107), Expect = 2e-52 Identities = 131/141 (92%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgaggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgaggg 129 Query: 61 catcaagaagttcgagaccctgngntacttgccaccactcannncngaggccctccttaa 120 |||||||||||||||||||||| ||| ||||||| |||| | ||||||||||| || Sbjct: 130 catcaagaagttcgagaccctgtcttacctgccaccgctcagcacggaggccctcctcaa 189 Query: 121 gcaggtcgactacctgatccg 141 ||||||||||||||||||||| Sbjct: 190 gcaggtcgactacctgatccg 210
>emb|X83095.1|ASRBCSSS A.squarrosa mRNA for ribulose-1,5-bisphosphate carboxylase/oxygenase, small subunit Length = 837 Score = 212 bits (107), Expect = 2e-52 Identities = 131/141 (92%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgaggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 151 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgaggg 210 Query: 61 catcaagaagttcgagaccctgngntacttgccaccactcannncngaggccctccttaa 120 ||||||||||||||||||||| ||||||||||| |||| | |||| ||||||||| Sbjct: 211 tatcaagaagttcgagaccctgtcctacttgccaccgctcagcacggagggcctccttaa 270 Query: 121 gcaggtcgactacctgatccg 141 ||||||||||||||||||||| Sbjct: 271 gcaggtcgactacctgatccg 291
>gb|U43493.1|HVU43493 Hordeum vulgare ribulose-1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 816 Score = 208 bits (105), Expect = 3e-51 Identities = 126/135 (93%) Strand = Plus / Plus Query: 7 cagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaa 66 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131 cagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaa 190 Query: 67 gaagttcgagaccctgngntacttgccaccactcannncngaggccctccttaagcaggt 126 |||||||||||||||| ||| | |||||||||| | |||||||||||||||||||| Sbjct: 191 gaagttcgagaccctgtcttaccttccaccactcagcacggaggccctccttaagcaggt 250 Query: 127 cgactacctgatccg 141 ||||||||||||||| Sbjct: 251 cgactacctgatccg 265
>emb|AJ131737.1|SCE131737 Secale cereale mRNA for hypothetical protein, clone 5 Length = 845 Score = 172 bits (87), Expect = 2e-40 Identities = 126/141 (89%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgaggg 60 |||| |||||||||||||||| ||||||||||| ||||||||||||||||| || ||||| Sbjct: 172 cctcagcagcgtcagcaacggcggaaggatcagatgcatgcaggtgtggccaattgaggg 231 Query: 61 catcaagaagttcgagaccctgngntacttgccaccactcannncngaggccctccttaa 120 |||||||||||||||||||||| ||||||||||| ||| | ||||||||||| || Sbjct: 232 catcaagaagttcgagaccctgtcttacttgccacccctctccacggaggccctcctgaa 291 Query: 121 gcaggtcgactacctgatccg 141 ||||||||||||||||||||| Sbjct: 292 gcaggtcgactacctgatccg 312
>emb|AJ635206.1| Triticum durum ssp. durum partial mRNA for putative rubisco small subunit (rbcS gene) Length = 518 Score = 165 bits (83), Expect = 4e-38 Identities = 125/141 (88%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgaggg 60 |||| |||||||||||||||| ||||||||||||||||||||||||||||| || ||||| Sbjct: 95 cctcagcagcgtcagcaacggcggaaggatcaggtgcatgcaggtgtggccgattgaggg 154 Query: 61 catcaagaagttcgagaccctgngntacttgccaccactcannncngaggccctccttaa 120 |||||||||||||||||||||| ||| ||||||| ||| | ||||||||||| || Sbjct: 155 catcaagaagttcgagaccctgtcttacctgccacccctctccacggaggccctcctgaa 214 Query: 121 gcaggtcgactacctgatccg 141 ||||||||||||| ||||||| Sbjct: 215 gcaggtcgactacttgatccg 235
>gb|AF192777.1|AF192777 Avena clauda clone Cl9 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 157 bits (79), Expect = 1e-35 Identities = 124/141 (87%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgaggg 60 |||||||| |||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 90 cctcggcaacgtcagcaacggtggaaggatcaggtgcatgcaggtgtggccgattgaggg 149 Query: 61 catcaagaagttcgagaccctgngntacttgccaccactcannncngaggccctccttaa 120 |||||||||||||||||||||| ||| ||||||||||| ||||||||||| || Sbjct: 150 catcaagaagttcgagaccctgtcttacctgccaccactctcagaggaggccctcctgaa 209 Query: 121 gcaggtcgactacctgatccg 141 |||| |||||| | ||||||| Sbjct: 210 gcagatcgacttcttgatccg 230
>gb|AF192775.1|AF192775 Avena strigosa clone Str5 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 157 bits (79), Expect = 1e-35 Identities = 124/141 (87%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgaggg 60 ||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||| Sbjct: 90 cctcggcagcgtcagcaacggcggaaggatcaggtgcatgcaggtgtggccgattgaggg 149 Query: 61 catcaagaagttcgagaccctgngntacttgccaccactcannncngaggccctccttaa 120 ||||||||||||||||||||| ||||||||||||||| ||||||||||| || Sbjct: 150 catcaagaagttcgagaccctttcttacttgccaccactctcggaggaggccctcctgaa 209 Query: 121 gcaggtcgactacctgatccg 141 |||| |||||| | ||||||| Sbjct: 210 gcagatcgacttcttgatccg 230
>gb|AF192774.1|AF192774 Avena strigosa clone Str3 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 157 bits (79), Expect = 1e-35 Identities = 124/141 (87%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgaggg 60 ||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||| Sbjct: 90 cctcggcagcgtcagcaacggcggaaggatcaggtgcatgcaggtgtggccgattgaggg 149 Query: 61 catcaagaagttcgagaccctgngntacttgccaccactcannncngaggccctccttaa 120 ||||||||||||||||||||| ||||||||||||||| ||||||||||| || Sbjct: 150 catcaagaagttcgagaccctttcttacttgccaccactctcggaggaggccctcctgaa 209 Query: 121 gcaggtcgactacctgatccg 141 |||| |||||| | ||||||| Sbjct: 210 gcagatcgacttcttgatccg 230
>gb|AF097360.1|AF097360 Avena strigosa ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 157 bits (79), Expect = 1e-35 Identities = 124/141 (87%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgaggg 60 ||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||| Sbjct: 90 cctcggcagcgtcagcaacggcggaaggatcaggtgcatgcaggtgtggccgattgaggg 149 Query: 61 catcaagaagttcgagaccctgngntacttgccaccactcannncngaggccctccttaa 120 ||||||||||||||||||||| ||||||||||||||| ||||||||||| || Sbjct: 150 catcaagaagttcgagaccctttcttacttgccaccactctcggaggaggccctcctgaa 209 Query: 121 gcaggtcgactacctgatccg 141 |||| |||||| | ||||||| Sbjct: 210 gcagatcgacttcttgatccg 230
>gb|AF192780.1|AF192780 Avena maroccana clone Ma7 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 149 bits (75), Expect = 3e-33 Identities = 123/141 (87%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgaggg 60 ||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||| Sbjct: 90 cctcggcagcgtcagcaacggcggaaggatcaggtgcatgcaggtgtggccaattgaggg 149 Query: 61 catcaagaagttcgagaccctgngntacttgccaccactcannncngaggccctccttaa 120 |||||||||||||||||||||| ||| |||||||||| ||||||||||| || Sbjct: 150 catcaagaagttcgagaccctgtcttacctgccaccactgtcagaggaggccctcctgaa 209 Query: 121 gcaggtcgactacctgatccg 141 |||| |||||| | ||||||| Sbjct: 210 gcagatcgacttcttgatccg 230
>gb|AF104250.1|AF104250 Avena maroccana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 149 bits (75), Expect = 3e-33 Identities = 123/141 (87%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgaggg 60 ||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||| Sbjct: 90 cctcggcagcgtcagcaacggcggaaggatcaggtgcatgcaggtgtggccaattgaggg 149 Query: 61 catcaagaagttcgagaccctgngntacttgccaccactcannncngaggccctccttaa 120 |||||||||||||||||||||| ||| |||||||||| ||||||||||| || Sbjct: 150 catcaagaagttcgagaccctgtcttacctgccaccactgtcagaggaggccctcctgaa 209 Query: 121 gcaggtcgactacctgatccg 141 |||| |||||| | ||||||| Sbjct: 210 gcagatcgacttcttgatccg 230
>gb|M37477.1|WHTRUBIAB T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase (RUBISCO) gene, complete cds Length = 779 Score = 149 bits (75), Expect = 3e-33 Identities = 123/141 (87%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgaggg 60 |||| ||||||||||||| || ||||||||||| ||||||||||||||||| || ||||| Sbjct: 162 cctcagcagcgtcagcaatggcggaaggatcagatgcatgcaggtgtggccaattgaggg 221 Query: 61 catcaagaagttcgagaccctgngntacttgccaccactcannncngaggccctccttaa 120 |||||||||||||||||||||| ||||||||||| ||| | ||||||||| | || Sbjct: 222 catcaagaagttcgagaccctgtcttacttgccacccctctccacggaggccctcttgaa 281 Query: 121 gcaggtcgactacctgatccg 141 ||||||||||||| ||||||| Sbjct: 282 gcaggtcgactacttgatccg 302
>gb|AF097361.1|AF097361 Avena clauda ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 141 bits (71), Expect = 6e-31 Identities = 122/141 (86%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgaggg 60 ||||||||||||||||||||||||||| ||||| ||||||||||||||||| || ||||| Sbjct: 90 cctcggcagcgtcagcaacggtggaagaatcagatgcatgcaggtgtggccgattgaggg 149 Query: 61 catcaagaagttcgagaccctgngntacttgccaccactcannncngaggccctccttaa 120 ||||||||||||||||||||| ||| ||||||||||| ||||||||||| || Sbjct: 150 catcaagaagttcgagaccctttcttacctgccaccactctcagaggaggccctcctgaa 209 Query: 121 gcaggtcgactacctgatccg 141 |||| |||||| | ||||||| Sbjct: 210 gcagatcgacttcttgatccg 230
>gb|AF096617.1|AF096617 Avena sterilis subsp. ludoviciana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, partial cds Length = 504 Score = 141 bits (71), Expect = 6e-31 Identities = 119/137 (86%) Strand = Plus / Plus Query: 5 ggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatc 64 ||||||||||||||||||||||| ||| | ||||||||||||||||| || ||||||||| Sbjct: 94 ggcagcgtcagcaacggtggaagaatccgatgcatgcaggtgtggcctattgagggcatc 153 Query: 65 aagaagttcgagaccctgngntacttgccaccactcannncngaggccctccttaagcag 124 |||||||||||||||||| ||| |||||||||||| ||||||||||| |||||| Sbjct: 154 aagaagttcgagaccctgtcttacctgccaccactcacagaggaggccctcctgaagcag 213 Query: 125 gtcgactacctgatccg 141 |||||| | ||||||| Sbjct: 214 atcgacttcttgatccg 230
>dbj|AB042066.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p9-1 Length = 739 Score = 137 bits (69), Expect = 1e-29 Identities = 93/103 (90%) Strand = Plus / Plus Query: 39 tgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccac 98 |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| | Sbjct: 354 tgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacctgccaccgc 413 Query: 99 tcannncngaggccctccttaagcaggtcgactacctgatccg 141 ||| | ||||||||||| ||||||||||||||||||||||| Sbjct: 414 tcagcacggaggccctcctcaagcaggtcgactacctgatccg 456 Score = 89.7 bits (45), Expect = 2e-15 Identities = 45/45 (100%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 149
>gb|AF192779.1|AF192779 Avena maroccana clone Ma4 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 133 bits (67), Expect = 2e-28 Identities = 118/137 (86%) Strand = Plus / Plus Query: 5 ggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatc 64 ||||||||||||||||||||||| ||| | ||||||||||||||||| || ||||||||| Sbjct: 94 ggcagcgtcagcaacggtggaagaatccgatgcatgcaggtgtggccgattgagggcatc 153 Query: 65 aagaagttcgagaccctgngntacttgccaccactcannncngaggccctccttaagcag 124 |||||||||||||||||| ||| ||||||||||| ||||||||||| |||||| Sbjct: 154 aagaagttcgagaccctgtcttacctgccaccactctcagaggaggccctcctgaagcag 213 Query: 125 gtcgactacctgatccg 141 |||||| | ||||||| Sbjct: 214 atcgacttcttgatccg 230
>gb|AF192778.1|AF192778 Avena sterilis subsp. ludoviciana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 133 bits (67), Expect = 2e-28 Identities = 118/137 (86%) Strand = Plus / Plus Query: 5 ggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatc 64 ||||||||||||||||||||||| ||| | ||||||||||||||||| || ||||||||| Sbjct: 94 ggcagcgtcagcaacggtggaagaatccgatgcatgcaggtgtggcctattgagggcatc 153 Query: 65 aagaagttcgagaccctgngntacttgccaccactcannncngaggccctccttaagcag 124 ||||| |||||||||||| ||| |||||||||||| ||||||||||| |||||| Sbjct: 154 aagaaattcgagaccctgtcttacctgccaccactcacagaggaggccctcctgaagcag 213 Query: 125 gtcgactacctgatccg 141 |||||| | ||||||| Sbjct: 214 atcgacttcttgatccg 230
>gb|AF192776.1|AF192776 Avena clauda clone Cl5 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 133 bits (67), Expect = 2e-28 Identities = 118/137 (86%) Strand = Plus / Plus Query: 5 ggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatc 64 ||||||||||||||||||||||| ||| | ||||||||||||||||| || ||||||||| Sbjct: 94 ggcagcgtcagcaacggtggaagaatccgatgcatgcaggtgtggccgattgagggcatc 153 Query: 65 aagaagttcgagaccctgngntacttgccaccactcannncngaggccctccttaagcag 124 |||||||||||||||||| ||| ||||||||||| ||||||||||| |||||| Sbjct: 154 aagaagttcgagaccctgtcttacctgccaccactctcagaggaggccctcctgaagcag 213 Query: 125 gtcgactacctgatccg 141 |||||| | ||||||| Sbjct: 214 atcgacttcttgatccg 230
>gb|AF192773.1|AF192773 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 133 bits (67), Expect = 2e-28 Identities = 118/137 (86%) Strand = Plus / Plus Query: 5 ggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatc 64 ||||||||||||||||||||||| ||| | ||||||||||||||||| || ||||||||| Sbjct: 94 ggcagcgtcagcaacggtggaagaatccgatgcatgcaggtgtggccgattgagggcatc 153 Query: 65 aagaagttcgagaccctgngntacttgccaccactcannncngaggccctccttaagcag 124 |||||||||||||||||| ||| ||||||||||| ||||||||||| |||||| Sbjct: 154 aagaagttcgagaccctgtcttacctgccaccactctcagaggaggccctcctgaagcag 213 Query: 125 gtcgactacctgatccg 141 |||||| | ||||||| Sbjct: 214 atcgacttcttgatccg 230
>gb|AF097359.1|AF097359 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 133 bits (67), Expect = 2e-28 Identities = 112/129 (86%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgaggg 60 ||||||||||||||||||||||||||| ||| | ||||||||||||||||| || ||||| Sbjct: 90 cctcggcagcgtcagcaacggtggaagaatccgatgcatgcaggtgtggccgattgaggg 149 Query: 61 catcaagaagttcgagaccctgngntacttgccaccactcannncngaggccctccttaa 120 |||||||||||||||||||||| ||| ||||||||||| ||||||||||| || Sbjct: 150 catcaagaagttcgagaccctgtcttacctgccaccactctcagaggaggccctcctgaa 209 Query: 121 gcaggtcga 129 |||| |||| Sbjct: 210 gcagatcga 218
>dbj|AB042064.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p2-1 Length = 653 Score = 129 bits (65), Expect = 2e-27 Identities = 92/103 (89%) Strand = Plus / Plus Query: 39 tgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccac 98 ||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||| | Sbjct: 268 tgcaggtgtggcccatcgagggcattaagaagttcgagaccctgtcctacctgccaccgc 327 Query: 99 tcannncngaggccctccttaagcaggtcgactacctgatccg 141 ||| | ||||||||||| ||||||||||||||||||||||| Sbjct: 328 tcagcacagaggccctcctcaagcaggtcgactacctgatccg 370 Score = 81.8 bits (41), Expect = 5e-13 Identities = 44/45 (97%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 |||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 105 cctcggcagcgtcagcaacggtggaaggatcaggcgcatgcaggt 149
>gb|AF104249.1|AF104249 Avena vaviloviana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 125 bits (63), Expect = 4e-26 Identities = 117/137 (85%) Strand = Plus / Plus Query: 5 ggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatc 64 ||||||||||||||||||||||| ||| | ||||||||||||||||| || ||||||||| Sbjct: 94 ggcagcgtcagcaacggtggaagaatccgatgcatgcaggtgtggcctattgagggcatc 153 Query: 65 aagaagttcgagaccctgngntacttgccaccactcannncngaggccctccttaagcag 124 |||||||||||||||||| ||| |||| |||||| ||||||||||| |||||| Sbjct: 154 aagaagttcgagaccctgtcttacctgccgccactctcagaggaggccctcctgaagcag 213 Query: 125 gtcgactacctgatccg 141 |||||| | ||||||| Sbjct: 214 atcgacttcttgatccg 230
>dbj|AB020939.1| Triticum timopheevii subsp. armeniacum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ara-A Length = 604 Score = 125 bits (63), Expect = 4e-26 Identities = 93/105 (88%) Strand = Plus / Plus Query: 37 catgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccacc 96 ||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||| Sbjct: 233 catgcaggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacc 292 Query: 97 actcannncngaggccctccttaagcaggtcgactacctgatccg 141 ||| | ||||||||||| ||||||||||||||||||||||| Sbjct: 293 cctctccacggaggccctcctgaagcaggtcgactacctgatccg 337 Score = 65.9 bits (33), Expect = 3e-08 Identities = 42/45 (93%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 ||||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 91 cctcggccgcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AK099574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013036G21, full insert sequence Length = 947 Score = 117 bits (59), Expect = 9e-24 Identities = 90/101 (89%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgaggg 60 ||||||||||||||||||||||||||||||||| || |||||||||||||| || || || Sbjct: 173 cctcggcagcgtcagcaacggtggaaggatcagctgtatgcaggtgtggccgattgaagg 232 Query: 61 catcaagaagttcgagaccctgngntacttgccaccactca 101 |||||||||||| ||||||||| ||| ||||||| |||| Sbjct: 233 catcaagaagtttgagaccctgtcgtacctgccaccgctca 273
>dbj|AB020959.1| Secale cereale DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sec-B Length = 789 Score = 117 bits (59), Expect = 9e-24 Identities = 89/101 (88%) Strand = Plus / Plus Query: 41 caggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccactc 100 ||||||||||| || ||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 422 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 481 Query: 101 annncngaggccctccttaagcaggtcgactacctgatccg 141 | ||||||||||| ||||||||||||||||||||||| Sbjct: 482 tccacggaggccctcctgaagcaggtcgactacctgatccg 522 Score = 73.8 bits (37), Expect = 1e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 |||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 91 cctcggcagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020947.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe2-B Length = 738 Score = 117 bits (59), Expect = 9e-24 Identities = 89/101 (88%) Strand = Plus / Plus Query: 41 caggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccactc 100 ||||||||||| || ||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 405 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 464 Query: 101 annncngaggccctccttaagcaggtcgactacctgatccg 141 | ||||||||||| ||||||||||||||||||||||| Sbjct: 465 tccacggaggccctcctgaagcaggtcgactacctgatccg 505 Score = 73.8 bits (37), Expect = 1e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 |||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 91 cctcggcagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020946.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe1-B Length = 787 Score = 117 bits (59), Expect = 9e-24 Identities = 89/101 (88%) Strand = Plus / Plus Query: 41 caggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccactc 100 ||||||||||| || ||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 420 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 479 Query: 101 annncngaggccctccttaagcaggtcgactacctgatccg 141 | ||||||||||| ||||||||||||||||||||||| Sbjct: 480 tccacggaggccctcctgaagcaggtcgactacctgatccg 520 Score = 73.8 bits (37), Expect = 1e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 |||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 91 cctcggcagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020944.1| Agropyron intermedium DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Agr-A Length = 604 Score = 117 bits (59), Expect = 9e-24 Identities = 89/101 (88%) Strand = Plus / Plus Query: 41 caggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccactc 100 ||||||||||| || ||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 237 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 296 Query: 101 annncngaggccctccttaagcaggtcgactacctgatccg 141 | ||||||||||| ||||||||||||||||||||||| Sbjct: 297 tccacggaggccctcctgaagcaggtcgactacctgatccg 337 Score = 73.8 bits (37), Expect = 1e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 |||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 91 cctcggcagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020938.1| Aegilops squarrosa DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Squ-A Length = 607 Score = 117 bits (59), Expect = 9e-24 Identities = 89/101 (88%) Strand = Plus / Plus Query: 41 caggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccactc 100 ||||||||||| || ||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 240 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 299 Query: 101 annncngaggccctccttaagcaggtcgactacctgatccg 141 | ||||||||||| ||||||||||||||||||||||| Sbjct: 300 tccacggaggccctcctgaagcaggtcgactacctgatccg 340 Score = 73.8 bits (37), Expect = 1e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 |||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 91 cctcggcagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020937.1| Aegilops searsii DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sea-A Length = 611 Score = 117 bits (59), Expect = 9e-24 Identities = 89/101 (88%) Strand = Plus / Plus Query: 41 caggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccactc 100 ||||||||||| || ||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 244 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 303 Query: 101 annncngaggccctccttaagcaggtcgactacctgatccg 141 | ||||||||||| ||||||||||||||||||||||| Sbjct: 304 tccacggaggccctcctgaagcaggtcgactacctgatccg 344 Score = 65.9 bits (33), Expect = 3e-08 Identities = 42/45 (93%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 ||||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 91 cctcggccgcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020931.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-A3 Length = 604 Score = 117 bits (59), Expect = 9e-24 Identities = 89/101 (88%) Strand = Plus / Plus Query: 41 caggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccactc 100 ||||||||||| || ||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 237 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 296 Query: 101 annncngaggccctccttaagcaggtcgactacctgatccg 141 | ||||||||||| ||||||||||||||||||||||| Sbjct: 297 tccacggaggccctcctgaagcaggtcgactacctgatccg 337 Score = 65.9 bits (33), Expect = 3e-08 Identities = 42/45 (93%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 ||||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 91 cctcggccgcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020930.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-A2 Length = 604 Score = 117 bits (59), Expect = 9e-24 Identities = 89/101 (88%) Strand = Plus / Plus Query: 41 caggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccactc 100 ||||||||||| || ||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 237 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 296 Query: 101 annncngaggccctccttaagcaggtcgactacctgatccg 141 | ||||||||||| ||||||||||||||||||||||| Sbjct: 297 tccacggaggccctcctgaagcaggtcgactacctgatccg 337 Score = 65.9 bits (33), Expect = 3e-08 Identities = 42/45 (93%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 ||||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 91 cctcggccgcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020929.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-A1 Length = 604 Score = 117 bits (59), Expect = 9e-24 Identities = 89/101 (88%) Strand = Plus / Plus Query: 41 caggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccactc 100 ||||||||||| || ||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 237 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 296 Query: 101 annncngaggccctccttaagcaggtcgactacctgatccg 141 | ||||||||||| ||||||||||||||||||||||| Sbjct: 297 tccacggaggccctcctgaagcaggtcgactacctgatccg 337 Score = 65.9 bits (33), Expect = 3e-08 Identities = 42/45 (93%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 ||||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 91 cctcggccgcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020928.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe2-A Length = 604 Score = 117 bits (59), Expect = 9e-24 Identities = 89/101 (88%) Strand = Plus / Plus Query: 41 caggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccactc 100 ||||||||||| || ||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 237 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 296 Query: 101 annncngaggccctccttaagcaggtcgactacctgatccg 141 | ||||||||||| ||||||||||||||||||||||| Sbjct: 297 tccacggaggccctcctgaagcaggtcgactacctgatccg 337 Score = 65.9 bits (33), Expect = 3e-08 Identities = 42/45 (93%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 ||||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 91 cctcggccgcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020927.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe1-A1 Length = 604 Score = 117 bits (59), Expect = 9e-24 Identities = 89/101 (88%) Strand = Plus / Plus Query: 41 caggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccactc 100 ||||||||||| || ||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 237 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 296 Query: 101 annncngaggccctccttaagcaggtcgactacctgatccg 141 | ||||||||||| ||||||||||||||||||||||| Sbjct: 297 tccacggaggccctcctgaagcaggtcgactacctgatccg 337 Score = 65.9 bits (33), Expect = 3e-08 Identities = 42/45 (93%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 ||||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 91 cctcggccgcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020926.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds Length = 604 Score = 117 bits (59), Expect = 9e-24 Identities = 89/101 (88%) Strand = Plus / Plus Query: 41 caggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccactc 100 ||||||||||| || ||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 237 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 296 Query: 101 annncngaggccctccttaagcaggtcgactacctgatccg 141 | ||||||||||| ||||||||||||||||||||||| Sbjct: 297 tccacggaggccctcctgaagcaggtcgactacctgatccg 337 Score = 65.9 bits (33), Expect = 3e-08 Identities = 42/45 (93%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 ||||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 91 cctcggccgcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB042069.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:6, subclone:16 Length = 5980 Score = 117 bits (59), Expect = 9e-24 Identities = 89/101 (88%) Strand = Plus / Plus Query: 41 caggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccactc 100 ||||||||||| || ||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 880 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 939 Query: 101 annncngaggccctccttaagcaggtcgactacctgatccg 141 | ||||||||||| ||||||||||||||||||||||| Sbjct: 940 tccacggaggccctcctgaagcaggtcgactacctgatccg 980 Score = 77.8 bits (39), Expect = 8e-12 Identities = 75/89 (84%) Strand = Plus / Plus Query: 53 atcgagggcatcaagaagttcgagaccctgngntacttgccaccactcannncngaggcc 112 ||||||||||| |||||||| ||||||||| ||||||||||| ||| |||||| Sbjct: 5296 atcgagggcatgaagaagtttgagaccctgtcttacttgccacccctctccatagaggcc 5355 Query: 113 ctccttaagcaggtcgactacctgatccg 141 ||||||| ||||||| ||||||||||||| Sbjct: 5356 ctccttacgcaggtcaactacctgatccg 5384 Score = 75.8 bits (38), Expect = 3e-11 Identities = 84/100 (84%), Gaps = 2/100 (2%) Strand = Plus / Plus Query: 41 caggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccactc 100 ||||| ||||| ||||||||||||||||||||||||| |||| |||||||| | ||| Sbjct: 3943 caggtttggccgatcgagggcatcaagaagttcgagatcctgtc--acttgccatccctc 4000 Query: 101 annncngaggccctccttaagcaggtcgactacctgatcc 140 ||||||||||| |||||||||||||||||||||| Sbjct: 4001 tccatggaggccctcctcaagcaggtcgactacctgatcc 4040 Score = 65.9 bits (33), Expect = 3e-08 Identities = 42/45 (93%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 ||||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 727 cctcggccgcgtcagcaatggcggaaggatcaggtgcatgcaggt 771
>dbj|AB042065.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase Small subunit, complete cds, clone:p6-1 Length = 638 Score = 117 bits (59), Expect = 9e-24 Identities = 89/101 (88%) Strand = Plus / Plus Query: 41 caggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccactc 100 ||||||||||| || ||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 255 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 314 Query: 101 annncngaggccctccttaagcaggtcgactacctgatccg 141 | ||||||||||| ||||||||||||||||||||||| Sbjct: 315 tccacggaggccctcctgaagcaggtcgactacctgatccg 355 Score = 65.9 bits (33), Expect = 3e-08 Identities = 42/45 (93%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 ||||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 102 cctcggccgcgtcagcaatggcggaaggatcaggtgcatgcaggt 146
>gb|AY445627.1| Oryza sativa (japonica cultivar-group) ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit mRNA, complete cds; chloroplast Length = 860 Score = 113 bits (57), Expect = 1e-22 Identities = 88/99 (88%) Strand = Plus / Plus Query: 3 tcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggca 62 |||||| ||||||||| || |||||||||| |||||||||||||||||| || ||||||| Sbjct: 158 tcggcaacgtcagcaatggcggaaggatcaagtgcatgcaggtgtggccaattgagggca 217 Query: 63 tcaagaagttcgagaccctgngntacttgccaccactca 101 ||||||||||||||||||| ||| |||||||||||| Sbjct: 218 tcaagaagttcgagaccctatcgtacctgccaccactca 256
>dbj|AK121444.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141B14, full insert sequence Length = 984 Score = 113 bits (57), Expect = 1e-22 Identities = 117/139 (84%) Strand = Plus / Plus Query: 3 tcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggca 62 |||||| ||||||||| || || |||||||||||||||||||||||||| || ||||||| Sbjct: 317 tcggcaacgtcagcaatggcggcaggatcaggtgcatgcaggtgtggccgattgagggca 376 Query: 63 tcaagaagttcgagaccctgngntacttgccaccactcannncngaggccctccttaagc 122 ||||||||||||||||||| ||| ||||||| |||| |||| |||||| |||| Sbjct: 377 tcaagaagttcgagaccctctcctacctgccaccgctcaccgtggaggacctcctgaagc 436 Query: 123 aggtcgactacctgatccg 141 || |||| |||||| |||| Sbjct: 437 agatcgagtacctgctccg 455
>dbj|AK119219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-F11, full insert sequence Length = 828 Score = 113 bits (57), Expect = 1e-22 Identities = 117/139 (84%) Strand = Plus / Plus Query: 3 tcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggca 62 |||||| ||||||||| || || |||||||||||||||||||||||||| || ||||||| Sbjct: 163 tcggcaacgtcagcaatggcggcaggatcaggtgcatgcaggtgtggccgattgagggca 222 Query: 63 tcaagaagttcgagaccctgngntacttgccaccactcannncngaggccctccttaagc 122 ||||||||||||||||||| ||| ||||||| |||| |||| |||||| |||| Sbjct: 223 tcaagaagttcgagaccctctcctacctgccaccgctcaccgtggaggacctcctgaagc 282 Query: 123 aggtcgactacctgatccg 141 || |||| |||||| |||| Sbjct: 283 agatcgagtacctgctccg 301
>dbj|AK070556.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062J10, full insert sequence Length = 2409 Score = 113 bits (57), Expect = 1e-22 Identities = 117/139 (84%) Strand = Plus / Plus Query: 3 tcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggca 62 |||||| ||||||||| || || |||||||||||||||||||||||||| || ||||||| Sbjct: 164 tcggcaacgtcagcaatggcggcaggatcaggtgcatgcaggtgtggccgattgagggca 223 Query: 63 tcaagaagttcgagaccctgngntacttgccaccactcannncngaggccctccttaagc 122 ||||||||||||||||||| ||| ||||||| |||| |||| |||||| |||| Sbjct: 224 tcaagaagttcgagaccctctcctacctgccaccgctcaccgtggaggacctcctgaagc 283 Query: 123 aggtcgactacctgatccg 141 || |||| |||||| |||| Sbjct: 284 agatcgagtacctgctccg 302
>dbj|AK068555.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156H12, full insert sequence Length = 899 Score = 113 bits (57), Expect = 1e-22 Identities = 88/99 (88%) Strand = Plus / Plus Query: 3 tcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggca 62 |||||| ||||||||| || |||||||||| |||||||||||||||||| || ||||||| Sbjct: 175 tcggcaacgtcagcaatggcggaaggatcaagtgcatgcaggtgtggccaattgagggca 234 Query: 63 tcaagaagttcgagaccctgngntacttgccaccactca 101 ||||||||||||||||||| ||| |||||||||||| Sbjct: 235 tcaagaagttcgagaccctatcgtacctgccaccactca 273
>dbj|AK061611.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F07, full insert sequence Length = 830 Score = 113 bits (57), Expect = 1e-22 Identities = 117/139 (84%) Strand = Plus / Plus Query: 3 tcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggca 62 |||||| ||||||||| || || |||||||||||||||||||||||||| || ||||||| Sbjct: 166 tcggcaacgtcagcaatggcggcaggatcaggtgcatgcaggtgtggccgattgagggca 225 Query: 63 tcaagaagttcgagaccctgngntacttgccaccactcannncngaggccctccttaagc 122 ||||||||||||||||||| ||| ||||||| |||| |||| |||||| |||| Sbjct: 226 tcaagaagttcgagaccctctcctacctgccaccgctcaccgtggaggacctcctgaagc 285 Query: 123 aggtcgactacctgatccg 141 || |||| |||||| |||| Sbjct: 286 agatcgagtacctgctccg 304
>gb|AF052305.1|AF052305 Oryza sativa ribulose 1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 835 Score = 113 bits (57), Expect = 1e-22 Identities = 117/139 (84%) Strand = Plus / Plus Query: 3 tcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggca 62 |||||| ||||||||| || || |||||||||||||||||||||||||| || ||||||| Sbjct: 152 tcggcaacgtcagcaatggcggcaggatcaggtgcatgcaggtgtggccgattgagggca 211 Query: 63 tcaagaagttcgagaccctgngntacttgccaccactcannncngaggccctccttaagc 122 ||||||||||||||||||| ||| ||||||| |||| |||| |||||| |||| Sbjct: 212 tcaagaagttcgagaccctctcctacctgccaccgctcaccgtggaggacctcctgaagc 271 Query: 123 aggtcgactacctgatccg 141 || |||| |||||| |||| Sbjct: 272 agatcgagtacctgctccg 290
>gb|AF017363.1|AF017363 Oryza sativa ribulose 1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 918 Score = 113 bits (57), Expect = 1e-22 Identities = 88/99 (88%) Strand = Plus / Plus Query: 3 tcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggca 62 |||||| ||||||||| || |||||||||| |||||||||||||||||| || ||||||| Sbjct: 159 tcggcaacgtcagcaatggcggaaggatcaagtgcatgcaggtgtggccaattgagggca 218 Query: 63 tcaagaagttcgagaccctgngntacttgccaccactca 101 ||||||||||||||||||| ||| |||||||||||| Sbjct: 219 tcaagaagttcgagaccctatcgtacctgccaccactca 257
>gb|L22155.1|RICCPRBCLA Oryza sativum mitochondrial ribulose bisphosphate carboxylase/oxygenase (rbcS) mRNA, complete cds Length = 808 Score = 113 bits (57), Expect = 1e-22 Identities = 117/139 (84%) Strand = Plus / Plus Query: 3 tcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggca 62 |||||| ||||||||| || || |||||||||||||||||||||||||| || ||||||| Sbjct: 141 tcggcaacgtcagcaatggcggcaggatcaggtgcatgcaggtgtggccgattgagggca 200 Query: 63 tcaagaagttcgagaccctgngntacttgccaccactcannncngaggccctccttaagc 122 ||||||||||||||||||| ||| ||||||| |||| |||| |||||| |||| Sbjct: 201 tcaagaagttcgagaccctctcctacctgccaccgctcaccgtggaggacctcctgaagc 260 Query: 123 aggtcgactacctgatccg 141 || |||| |||||| |||| Sbjct: 261 agatcgagtacctgctccg 279
>dbj|D00643.1|RICRUBPC1 Oryza sativa (japonica cultivar-group) mRNA for the small subunit of ribulose-1,5-bisphosphate carboxylase, complete cds, clone pOSSS1139 Length = 830 Score = 113 bits (57), Expect = 1e-22 Identities = 117/139 (84%) Strand = Plus / Plus Query: 3 tcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggca 62 |||||| ||||||||| || || |||||||||||||||||||||||||| || ||||||| Sbjct: 161 tcggcaacgtcagcaatggcggcaggatcaggtgcatgcaggtgtggccgattgagggca 220 Query: 63 tcaagaagttcgagaccctgngntacttgccaccactcannncngaggccctccttaagc 122 ||||||||||||||||||| ||| ||||||| |||| |||| |||||| |||| Sbjct: 221 tcaagaagttcgagaccctctcctacctgccaccgctcaccgtggaggacctcctgaagc 280 Query: 123 aggtcgactacctgatccg 141 || |||| |||||| |||| Sbjct: 281 agatcgagtacctgctccg 299
>gb|AF017364.1|AF017364 Oryza sativa ribulose 1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 854 Score = 109 bits (55), Expect = 2e-21 Identities = 73/79 (92%) Strand = Plus / Plus Query: 3 tcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggca 62 |||||| ||||||||| || || |||||||||||||||||||||||||| || ||||||| Sbjct: 189 tcggcaacgtcagcaatggcggcaggatcaggtgcatgcaggtgtggccgattgagggca 248 Query: 63 tcaagaagttcgagaccct 81 ||||||||||||||||||| Sbjct: 249 tcaagaagttcgagaccct 267
>dbj|AB020955.1| Triticum timopheevii subsp. armeniacum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ara-B Length = 787 Score = 109 bits (55), Expect = 2e-21 Identities = 88/101 (87%) Strand = Plus / Plus Query: 41 caggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccactc 100 ||||||||||| || ||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 420 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 479 Query: 101 annncngaggccctccttaagcaggtcgactacctgatccg 141 | || |||||||| ||||||||||||||||||||||| Sbjct: 480 tccacggaagccctcctgaagcaggtcgactacctgatccg 520 Score = 73.8 bits (37), Expect = 1e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 |||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 91 cctcggcagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020954.1| Triticum urartu DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ura-B Length = 787 Score = 109 bits (55), Expect = 2e-21 Identities = 88/101 (87%) Strand = Plus / Plus Query: 41 caggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccactc 100 ||||||||||| || ||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 420 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 479 Query: 101 annncngaggccctccttaagcaggtcgactacctgatccg 141 | || |||||||| ||||||||||||||||||||||| Sbjct: 480 tccacggaagccctcctgaagcaggtcgactacctgatccg 520 Score = 73.8 bits (37), Expect = 1e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 |||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 91 cctcggcagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020952.1| Aegilops searsii DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sea-B Length = 728 Score = 109 bits (55), Expect = 2e-21 Identities = 88/101 (87%) Strand = Plus / Plus Query: 41 caggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccactc 100 ||||||||||| || |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 361 caggtgtggccaattgagggcatcaagaagttcgagaccctatcttacttgccacccctc 420 Query: 101 annncngaggccctccttaagcaggtcgactacctgatccg 141 | ||||||||||| ||||||||||||||||||||||| Sbjct: 421 tccacggaggccctcctgaagcaggtcgactacctgatccg 461 Score = 73.8 bits (37), Expect = 1e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 |||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 91 cctcggcagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020951.1| Aegilops bicornis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Bic-B Length = 783 Score = 109 bits (55), Expect = 2e-21 Identities = 88/101 (87%) Strand = Plus / Plus Query: 41 caggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccactc 100 ||||||||||| || ||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 421 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 480 Query: 101 annncngaggccctccttaagcaggtcgactacctgatccg 141 | || |||||||| ||||||||||||||||||||||| Sbjct: 481 tccacggaagccctcctgaagcaggtcgactacctgatccg 521 Score = 73.8 bits (37), Expect = 1e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 |||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 91 cctcggcagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020950.1| Aegilops sharonensis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sha-B Length = 792 Score = 109 bits (55), Expect = 2e-21 Identities = 88/101 (87%) Strand = Plus / Plus Query: 41 caggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccactc 100 ||||||||||| || ||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 425 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 484 Query: 101 annncngaggccctccttaagcaggtcgactacctgatccg 141 | || |||||||| ||||||||||||||||||||||| Sbjct: 485 tccacggaagccctcctgaagcaggtcgactacctgatccg 525 Score = 65.9 bits (33), Expect = 3e-08 Identities = 42/45 (93%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 |||||||||||||||||| || ||||||||||||| ||||||||| Sbjct: 91 cctcggcagcgtcagcaatggcggaaggatcaggtacatgcaggt 135
>dbj|AB020949.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-B Length = 792 Score = 109 bits (55), Expect = 2e-21 Identities = 88/101 (87%) Strand = Plus / Plus Query: 41 caggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccactc 100 ||||||||||| || ||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 425 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 484 Query: 101 annncngaggccctccttaagcaggtcgactacctgatccg 141 | || |||||||| ||||||||||||||||||||||| Sbjct: 485 tccacggaagccctcctgaagcaggtcgactacctgatccg 525 Score = 73.8 bits (37), Expect = 1e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 |||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 91 cctcggcagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020943.1| Hordeum vulgare DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Hor-A Length = 605 Score = 109 bits (55), Expect = 2e-21 Identities = 88/101 (87%) Strand = Plus / Plus Query: 41 caggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccactc 100 ||||||||||| || ||||| ||||||||||||||||||||| ||||||||||| ||| Sbjct: 238 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 297 Query: 101 annncngaggccctccttaagcaggtcgactacctgatccg 141 | | ||||||||||| |||||||| |||||||||||||| Sbjct: 298 accacggaggccctcctgaagcaggttgactacctgatccg 338 Score = 73.8 bits (37), Expect = 1e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 |||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 91 cctcggcagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020936.1| Aegilops bicornis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Bic-A Length = 605 Score = 109 bits (55), Expect = 2e-21 Identities = 88/101 (87%) Strand = Plus / Plus Query: 41 caggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccactc 100 ||||||||||| || ||||| ||||||||||||||||||||| ||||||||||| ||| Sbjct: 238 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 297 Query: 101 annncngaggccctccttaagcaggtcgactacctgatccg 141 | ||||||||||| ||||||||||||||||||||||| Sbjct: 298 tccacggaggccctcctaaagcaggtcgactacctgatccg 338 Score = 73.8 bits (37), Expect = 1e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 |||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 91 cctcggcagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020934.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-A3 Length = 605 Score = 109 bits (55), Expect = 2e-21 Identities = 88/101 (87%) Strand = Plus / Plus Query: 41 caggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccactc 100 ||||||||||| || ||||| ||||||||||||||||||||| ||||||||||| ||| Sbjct: 238 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 297 Query: 101 annncngaggccctccttaagcaggtcgactacctgatccg 141 | ||||||||||| ||||||||||||||||||||||| Sbjct: 298 tccacagaggccctcctaaagcaggtcgactacctgatccg 338 Score = 73.8 bits (37), Expect = 1e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 |||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 91 cctcggcagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020933.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-A2 Length = 605 Score = 109 bits (55), Expect = 2e-21 Identities = 88/101 (87%) Strand = Plus / Plus Query: 41 caggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccactc 100 ||||||||||| || ||||| ||||||||||||||||||||| ||||||||||| ||| Sbjct: 238 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 297 Query: 101 annncngaggccctccttaagcaggtcgactacctgatccg 141 | ||||||||||| ||||||||||||||||||||||| Sbjct: 298 tccacagaggccctcctaaagcaggtcgactacctgatccg 338 Score = 73.8 bits (37), Expect = 1e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 |||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 91 cctcggcagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020932.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-A1 Length = 605 Score = 109 bits (55), Expect = 2e-21 Identities = 88/101 (87%) Strand = Plus / Plus Query: 41 caggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccactc 100 ||||||||||| || ||||| ||||||||||||||||||||| ||||||||||| ||| Sbjct: 238 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 297 Query: 101 annncngaggccctccttaagcaggtcgactacctgatccg 141 | ||||||||||| ||||||||||||||||||||||| Sbjct: 298 tccacagaggccctcctaaagcaggtcgactacctgatccg 338 Score = 73.8 bits (37), Expect = 1e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 |||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 91 cctcggcagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020948.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-B Length = 772 Score = 107 bits (54), Expect = 9e-21 Identities = 87/100 (87%) Strand = Plus / Plus Query: 42 aggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccactca 101 |||||||||| || ||||||||||||||||||||||||||| ||||||||||| || Sbjct: 406 aggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctat 465 Query: 102 nnncngaggccctccttaagcaggtcgactacctgatccg 141 | ||||||||||| ||||||||||||||||||||||| Sbjct: 466 ccacggaggccctcctgaagcaggtcgactacctgatccg 505 Score = 73.8 bits (37), Expect = 1e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 |||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 91 cctcggcagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|D00644.1|RICRUBPC2 Oryza sativa (japonica cultivar-group) mRNA for the small subunit of ribulose-1,5-bisphosphate carboxylase, complete cds, clone pOSSS2106 Length = 895 Score = 105 bits (53), Expect = 3e-20 Identities = 87/99 (87%) Strand = Plus / Plus Query: 3 tcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggca 62 |||||| ||||||||| || |||||||||| || ||||||||||||||| || ||||||| Sbjct: 173 tcggcaacgtcagcaatggcggaaggatcaagttcatgcaggtgtggccaattgagggca 232 Query: 63 tcaagaagttcgagaccctgngntacttgccaccactca 101 ||||||||||||||||||| ||| |||||||||||| Sbjct: 233 tcaagaagttcgagaccctatcgtacctgccaccactca 271
>dbj|AB020958.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone CS-B2 Length = 781 Score = 101 bits (51), Expect = 5e-19 Identities = 87/101 (86%) Strand = Plus / Plus Query: 41 caggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccactc 100 ||||||||||| || |||||||||||||||||||||||| || ||||||||||| ||| Sbjct: 414 caggtgtggccaattgagggcatcaagaagttcgagaccttgtcttacttgccacccctc 473 Query: 101 annncngaggccctccttaagcaggtcgactacctgatccg 141 | || |||||||| ||||||||||||||||||||||| Sbjct: 474 tccacggaagccctcctgaagcaggtcgactacctgatccg 514 Score = 73.8 bits (37), Expect = 1e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 |||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 91 cctcggcagcgtcagcaatgggggaaggatcaggtgcatgcaggt 135
>dbj|AB020953.1| Aegilops squarrosa DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Squ-B Length = 781 Score = 101 bits (51), Expect = 5e-19 Identities = 87/101 (86%) Strand = Plus / Plus Query: 41 caggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccactc 100 ||||||||||| || |||||||||||||||||||||||| || ||||||||||| ||| Sbjct: 414 caggtgtggccaattgagggcatcaagaagttcgagaccttgtcttacttgccacccctc 473 Query: 101 annncngaggccctccttaagcaggtcgactacctgatccg 141 | || |||||||| ||||||||||||||||||||||| Sbjct: 474 tccacggaagccctcctgaagcaggtcgactacctgatccg 514 Score = 73.8 bits (37), Expect = 1e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 |||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 91 cctcggcagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020942.1| Secale cereale DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sec-A Length = 591 Score = 101 bits (51), Expect = 5e-19 Identities = 87/101 (86%) Strand = Plus / Plus Query: 41 caggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccactc 100 ||||||||||| || ||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 224 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 283 Query: 101 annncngaggccctccttaagcaggtcgactacctgatccg 141 | || |||||| | ||||||||||||||||||||||| Sbjct: 284 tccacggaagccctcttgaagcaggtcgactacctgatccg 324 Score = 65.9 bits (33), Expect = 3e-08 Identities = 42/45 (93%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 |||||||| ||||||||| || ||||||||||||||||||||||| Sbjct: 91 cctcggcaacgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020941.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone CS-A Length = 605 Score = 101 bits (51), Expect = 5e-19 Identities = 87/101 (86%) Strand = Plus / Plus Query: 41 caggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccactc 100 ||||||||||| || ||||| ||||||||||||||||||||| ||||||||||| ||| Sbjct: 238 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 297 Query: 101 annncngaggccctccttaagcaggtcgactacctgatccg 141 | ||||||||||| |||||||| |||||||||||||| Sbjct: 298 tccacagaggccctcctaaagcaggtagactacctgatccg 338 Score = 65.9 bits (33), Expect = 3e-08 Identities = 42/45 (93%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 ||||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 91 cctcggccgcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020940.1| Triticum turgidum subsp. dicoccoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Dic-A Length = 605 Score = 101 bits (51), Expect = 5e-19 Identities = 87/101 (86%) Strand = Plus / Plus Query: 41 caggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccactc 100 ||||||||||| || ||||| ||||||||||||||||||||| ||||||||||| ||| Sbjct: 238 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 297 Query: 101 annncngaggccctccttaagcaggtcgactacctgatccg 141 | ||||||||||| |||||||| |||||||||||||| Sbjct: 298 tccacagaggccctcctaaagcaggtagactacctgatccg 338 Score = 65.9 bits (33), Expect = 3e-08 Identities = 42/45 (93%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 ||||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 91 cctcggccgcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020960.1| Bromus catharticus DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Bro-B Length = 784 Score = 101 bits (51), Expect = 5e-19 Identities = 87/101 (86%) Strand = Plus / Plus Query: 41 caggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccactc 100 ||||||||||| || ||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 417 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 476 Query: 101 annncngaggccctccttaagcaggtcgactacctgatccg 141 | ||||||||||| |||||| |||||||| ||||||| Sbjct: 477 tccaccgaggccctcctgaagcagatcgactacttgatccg 517 Score = 73.8 bits (37), Expect = 1e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 ||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 88 cctcggcagcgtcagcagcggcggaaggatcaggtgcatgcaggt 132
>dbj|AB042068.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p13-1 Length = 985 Score = 101 bits (51), Expect = 5e-19 Identities = 87/101 (86%) Strand = Plus / Plus Query: 41 caggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccactc 100 ||||||||||| || ||||||||||||||||||||||| ||| ||||||||||| ||| Sbjct: 602 caggtgtggccgattgagggcatcaagaagttcgagactctgtcttacttgccacccctc 661 Query: 101 annncngaggccctccttaagcaggtcgactacctgatccg 141 | ||||||||||| ||||||||||||||| ||||||| Sbjct: 662 tccacggaggccctcctgaagcaggtcgactacttgatccg 702 Score = 73.8 bits (37), Expect = 1e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 |||| |||||||||||||||| ||||||||||||||||||||||| Sbjct: 105 cctcagcagcgtcagcaacggcggaaggatcaggtgcatgcaggt 149
>dbj|AB042067.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p10-1 Length = 629 Score = 101 bits (51), Expect = 5e-19 Identities = 87/101 (86%) Strand = Plus / Plus Query: 41 caggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccactc 100 ||||||||||| || ||||| ||||||||||||||||||||| ||||||||||| ||| Sbjct: 246 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 305 Query: 101 annncngaggccctccttaagcaggtcgactacctgatccg 141 | ||||||||||| |||||||| |||||||||||||| Sbjct: 306 tccacagaggccctcctaaagcaggtagactacctgatccg 346 Score = 50.1 bits (25), Expect = 0.002 Identities = 41/45 (91%), Gaps = 1/45 (2%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 ||||||| |||||| ||| || ||||||||||||||||||||||| Sbjct: 100 cctcggccgcgtca-caatggcggaaggatcaggtgcatgcaggt 143
>dbj|AK070257.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042N11, full insert sequence Length = 845 Score = 93.7 bits (47), Expect = 1e-16 Identities = 78/89 (87%) Strand = Plus / Plus Query: 5 ggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatc 64 |||| ||||||||| || ||||||||||| ||||||||||||||||| || |||||||| Sbjct: 173 ggcaacgtcagcaatggcggaaggatcagatgcatgcaggtgtggccgattgagggcatt 232 Query: 65 aagaagttcgagaccctgngntacttgcc 93 |||||||||||||| ||| |||||||| Sbjct: 233 aagaagttcgagactctgtcgtacttgcc 261
>dbj|AK068266.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149A10, full insert sequence Length = 1999 Score = 93.7 bits (47), Expect = 1e-16 Identities = 78/89 (87%) Strand = Plus / Plus Query: 5 ggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatc 64 |||| ||||||||| || ||||||||||| ||||||||||||||||| || |||||||| Sbjct: 175 ggcaacgtcagcaatggcggaaggatcagatgcatgcaggtgtggccgattgagggcatt 234 Query: 65 aagaagttcgagaccctgngntacttgcc 93 |||||||||||||| ||| |||||||| Sbjct: 235 aagaagttcgagactctgtcgtacttgcc 263
>gb|AF200303.1|AF200303 Avena clauda ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, nuclear gene encoding chloroplast protein, partial cds Length = 594 Score = 93.7 bits (47), Expect = 1e-16 Identities = 86/101 (85%) Strand = Plus / Plus Query: 41 caggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccactc 100 ||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 220 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 279 Query: 101 annncngaggccctccttaagcaggtcgactacctgatccg 141 ||||||||||| |||||| |||||| | ||||||| Sbjct: 280 tctgaggaggccctcctgaagcagatcgacttcttgatccg 320 Score = 81.8 bits (41), Expect = 5e-13 Identities = 44/45 (97%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 90 cctcggcagcgtcagcaacggcggaaggatcaggtgcatgcaggt 134
>dbj|AB020935.1| Aegilops sharonensis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sha-A Length = 605 Score = 93.7 bits (47), Expect = 1e-16 Identities = 86/101 (85%) Strand = Plus / Plus Query: 41 caggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccactc 100 ||||||||||| || ||||| |||||||| |||||||||||| ||||||||||| ||| Sbjct: 238 caggtgtggccgattgagggtatcaagaaattcgagaccctgtcttacttgccacccctc 297 Query: 101 annncngaggccctccttaagcaggtcgactacctgatccg 141 | ||||||||||| ||||||||||||||| ||||||| Sbjct: 298 tccacagaggccctcctaaagcaggtcgactacttgatccg 338 Score = 73.8 bits (37), Expect = 1e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 |||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 91 cctcggcagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020957.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone CS-B1 Length = 787 Score = 91.7 bits (46), Expect = 5e-16 Identities = 85/100 (85%) Strand = Plus / Plus Query: 42 aggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccactca 101 |||||||||| || ||||||||||||||||||||||||||| ||| ||||||| || Sbjct: 421 aggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacctgccacccctat 480 Query: 102 nnncngaggccctccttaagcaggtcgactacctgatccg 141 | ||||||||||| || |||||||||||||||||||| Sbjct: 481 ccacggaggccctcctgaaacaggtcgactacctgatccg 520 Score = 65.9 bits (33), Expect = 3e-08 Identities = 42/45 (93%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 |||| ||||||||||||| || ||||||||||||||||||||||| Sbjct: 91 cctcagcagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020956.1| Triticum turgidum subsp. dicoccoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Dic-B Length = 787 Score = 91.7 bits (46), Expect = 5e-16 Identities = 85/100 (85%) Strand = Plus / Plus Query: 42 aggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccactca 101 |||||||||| || ||||||||||||||||||||||||||| ||| ||||||| || Sbjct: 421 aggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacctgccacccctat 480 Query: 102 nnncngaggccctccttaagcaggtcgactacctgatccg 141 | ||||||||||| || |||||||||||||||||||| Sbjct: 481 ccacggaggccctcctgaaacaggtcgactacctgatccg 520 Score = 65.9 bits (33), Expect = 3e-08 Identities = 42/45 (93%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 |||| ||||||||||||| || ||||||||||||||||||||||| Sbjct: 91 cctcagcagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>gb|M37328.1|WHTRUBIAA T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase (RUBISCO) gene, exons 1 and 2 Length = 2205 Score = 85.7 bits (43), Expect = 3e-14 Identities = 85/101 (84%) Strand = Plus / Plus Query: 41 caggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccactc 100 ||||||||||| || ||||||||||||||||| ||||||||| ||||||||||| ||| Sbjct: 1126 caggtgtggccaattgagggcatcaagaagtttgagaccctgtcttacttgccacccctc 1185 Query: 101 annncngaggccctccttaagcaggtcgactacctgatccg 141 | || |||||| ||||||||||||||||||||||| Sbjct: 1186 tccacggaagccctctcgaagcaggtcgactacctgatccg 1226 Score = 81.8 bits (41), Expect = 5e-13 Identities = 44/45 (97%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 797 cctcggcagcgtcagcaacggcggaaggatcaggtgcatgcaggt 841
>emb|X06535.1|ZMRUBSSU Maize mRNA for ribulose-1,5-bisphosphate carboxylase small subunit (RuBPC; EC 4.1.1.39) Length = 830 Score = 83.8 bits (42), Expect = 1e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgaggg 60 |||||||| |||||||||||| ||||||||| ||||||||||||||||||| | | || Sbjct: 170 cctcggcaacgtcagcaacggcggaaggatccggtgcatgcaggtgtggccggcctacgg 229 Query: 61 catcaagaagttcgagac 78 || ||||||||||||||| Sbjct: 230 caacaagaagttcgagac 247
>gb|AF202646.1|AF202646 Avena clauda clone ClG4 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 586 Score = 83.8 bits (42), Expect = 1e-13 Identities = 84/100 (84%) Strand = Plus / Plus Query: 42 aggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccactca 101 |||||||||| || |||||||||||||||||||||||||| ||||||||||||||| Sbjct: 213 aggtgtggccgattgagggcatcaagaagttcgagaccctttcttacttgccaccactct 272 Query: 102 nnncngaggccctccttaagcaggtcgactacctgatccg 141 ||||||||||| |||||| |||||| | ||||||| Sbjct: 273 cagaggaggccctcctaaagcagatcgacttcttgatccg 312 Score = 81.8 bits (41), Expect = 5e-13 Identities = 44/45 (97%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 ||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 90 cctcggcagcgtcagcaacggtggaaggatcagatgcatgcaggt 134
>gb|AY103730.1| Zea mays PCO095823 mRNA sequence Length = 1172 Score = 83.8 bits (42), Expect = 1e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgaggg 60 |||||||| |||||||||||| ||||||||| ||||||||||||||||||| | | || Sbjct: 290 cctcggcaacgtcagcaacggcggaaggatccggtgcatgcaggtgtggccggcctacgg 349 Query: 61 catcaagaagttcgagac 78 || ||||||||||||||| Sbjct: 350 caacaagaagttcgagac 367
>dbj|D00170.1|MZEPCSSU Zea mays mRNA for ribulose 1,5-bisphosphate carboxylase small subunit, complete cds Length = 830 Score = 83.8 bits (42), Expect = 1e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgaggg 60 |||||||| |||||||||||| ||||||||| ||||||||||||||||||| | | || Sbjct: 170 cctcggcaacgtcagcaacggcggaaggatccggtgcatgcaggtgtggccggcctacgg 229 Query: 61 catcaagaagttcgagac 78 || ||||||||||||||| Sbjct: 230 caacaagaagttcgagac 247
>gb|AF202648.1|AF202648 Avena maroccana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 620 Score = 81.8 bits (41), Expect = 5e-13 Identities = 44/45 (97%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 90 cctcggcagcgtcagcaacggcggaaggatcaggtgcatgcaggt 134 Score = 77.8 bits (39), Expect = 8e-12 Identities = 84/101 (83%) Strand = Plus / Plus Query: 41 caggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccactc 100 ||||||||||| || ||||||||||||||||||||||||||| ||| |||||||||| Sbjct: 246 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacctgccaccactg 305 Query: 101 annncngaggccctccttaagcaggtcgactacctgatccg 141 ||||||||||| |||||| |||||| | ||||||| Sbjct: 306 tcagaggaggccctcctgaagcagatcgacttcttgatccg 346
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 73.8 bits (37), Expect = 1e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 ||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 11276434 cctcggcagcgtcagcaacggtggaaggatcagctgtatgcaggt 11276478 Score = 69.9 bits (35), Expect = 2e-09 Identities = 54/61 (88%) Strand = Plus / Plus Query: 41 caggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccactc 100 ||||||||||| || |||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 11261928 caggtgtggccaattgagggcatcaagaagttcgagaccctatcgtacctgccaccactc 11261987 Query: 101 a 101 | Sbjct: 11261988 a 11261988 Score = 67.9 bits (34), Expect = 8e-09 Identities = 82/100 (82%) Strand = Plus / Minus Query: 42 aggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccactca 101 |||||||||| || |||||||||||||||||||||||||| ||| ||||||| |||| Sbjct: 10080152 aggtgtggccgattgagggcatcaagaagttcgagaccctctcctacctgccaccgctca 10080093 Query: 102 nnncngaggccctccttaagcaggtcgactacctgatccg 141 |||| |||||| |||||| |||| |||||| |||| Sbjct: 10080092 ccgtggaggacctcctgaagcagatcgagtacctgctccg 10080053 Score = 56.0 bits (28), Expect = 3e-05 Identities = 53/62 (85%) Strand = Plus / Plus Query: 40 gcaggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccact 99 |||||||||||| || || |||||||||||||| ||||||||| ||| ||||||| || Sbjct: 11276590 gcaggtgtggccgattgaaggcatcaagaagtttgagaccctgtcgtacctgccaccgct 11276649 Query: 100 ca 101 || Sbjct: 11276650 ca 11276651 Score = 54.0 bits (27), Expect = 1e-04 Identities = 46/53 (86%) Strand = Plus / Plus Query: 41 caggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgcc 93 ||||||||||| || |||||||| |||||||||||||| ||| |||||||| Sbjct: 11319738 caggtgtggccgattgagggcattaagaagttcgagactctgtcgtacttgcc 11319790 Score = 54.0 bits (27), Expect = 1e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 3 tcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 |||||| ||||||||| || |||||||||| |||||||||||| Sbjct: 11261779 tcggcaacgtcagcaatggcggaaggatcaagtgcatgcaggt 11261821 Score = 54.0 bits (27), Expect = 1e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 3 tcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 |||||| ||||||||| || || |||||||||||||||||||| Sbjct: 10080294 tcggcaacgtcagcaatggcggcaggatcaggtgcatgcaggt 10080252 Score = 50.1 bits (25), Expect = 0.002 Identities = 37/41 (90%) Strand = Plus / Plus Query: 5 ggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 |||| ||||||||| || ||||||||||| ||||||||||| Sbjct: 11319599 ggcaacgtcagcaatggcggaaggatcagatgcatgcaggt 11319639 Score = 44.1 bits (22), Expect = 0.11 Identities = 28/30 (93%) Strand = Plus / Plus Query: 16 caacggtggaaggatcaggtgcatgcaggt 45 |||||| |||||||||| |||||||||||| Sbjct: 11264830 caacggcggaaggatcaagtgcatgcaggt 11264859
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 73.8 bits (37), Expect = 1e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 ||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 11276105 cctcggcagcgtcagcaacggtggaaggatcagctgtatgcaggt 11276149 Score = 69.9 bits (35), Expect = 2e-09 Identities = 54/61 (88%) Strand = Plus / Plus Query: 41 caggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccactc 100 ||||||||||| || |||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 11261599 caggtgtggccaattgagggcatcaagaagttcgagaccctatcgtacctgccaccactc 11261658 Query: 101 a 101 | Sbjct: 11261659 a 11261659 Score = 67.9 bits (34), Expect = 8e-09 Identities = 82/100 (82%) Strand = Plus / Minus Query: 42 aggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccactca 101 |||||||||| || |||||||||||||||||||||||||| ||| ||||||| |||| Sbjct: 10080037 aggtgtggccgattgagggcatcaagaagttcgagaccctctcctacctgccaccgctca 10079978 Query: 102 nnncngaggccctccttaagcaggtcgactacctgatccg 141 |||| |||||| |||||| |||| |||||| |||| Sbjct: 10079977 ccgtggaggacctcctgaagcagatcgagtacctgctccg 10079938 Score = 56.0 bits (28), Expect = 3e-05 Identities = 53/62 (85%) Strand = Plus / Plus Query: 40 gcaggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccact 99 |||||||||||| || || |||||||||||||| ||||||||| ||| ||||||| || Sbjct: 11276261 gcaggtgtggccgattgaaggcatcaagaagtttgagaccctgtcgtacctgccaccgct 11276320 Query: 100 ca 101 || Sbjct: 11276321 ca 11276322 Score = 54.0 bits (27), Expect = 1e-04 Identities = 46/53 (86%) Strand = Plus / Plus Query: 41 caggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgcc 93 ||||||||||| || |||||||| |||||||||||||| ||| |||||||| Sbjct: 11319409 caggtgtggccgattgagggcattaagaagttcgagactctgtcgtacttgcc 11319461 Score = 54.0 bits (27), Expect = 1e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 3 tcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 |||||| ||||||||| || |||||||||| |||||||||||| Sbjct: 11261450 tcggcaacgtcagcaatggcggaaggatcaagtgcatgcaggt 11261492 Score = 54.0 bits (27), Expect = 1e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 3 tcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 |||||| ||||||||| || || |||||||||||||||||||| Sbjct: 10080179 tcggcaacgtcagcaatggcggcaggatcaggtgcatgcaggt 10080137 Score = 50.1 bits (25), Expect = 0.002 Identities = 37/41 (90%) Strand = Plus / Plus Query: 5 ggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 |||| ||||||||| || ||||||||||| ||||||||||| Sbjct: 11319270 ggcaacgtcagcaatggcggaaggatcagatgcatgcaggt 11319310 Score = 44.1 bits (22), Expect = 0.11 Identities = 28/30 (93%) Strand = Plus / Plus Query: 16 caacggtggaaggatcaggtgcatgcaggt 45 |||||| |||||||||| |||||||||||| Sbjct: 11264501 caacggcggaaggatcaagtgcatgcaggt 11264530
>emb|BX119951.3|CNS09S4U Oryza sativa chromosome 12, . BAC OJ1523_A01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127267 Score = 73.8 bits (37), Expect = 1e-10 Identities = 43/45 (95%) Strand = Plus / Minus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 ||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 95620 cctcggcagcgtcagcaacggtggaaggatcagctgtatgcaggt 95576 Score = 69.9 bits (35), Expect = 2e-09 Identities = 54/61 (88%) Strand = Plus / Minus Query: 41 caggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccactc 100 ||||||||||| || |||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 110126 caggtgtggccaattgagggcatcaagaagttcgagaccctatcgtacctgccaccactc 110067 Query: 101 a 101 | Sbjct: 110066 a 110066 Score = 56.0 bits (28), Expect = 3e-05 Identities = 53/62 (85%) Strand = Plus / Minus Query: 40 gcaggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccact 99 |||||||||||| || || |||||||||||||| ||||||||| ||| ||||||| || Sbjct: 95464 gcaggtgtggccgattgaaggcatcaagaagtttgagaccctgtcgtacctgccaccgct 95405 Query: 100 ca 101 || Sbjct: 95404 ca 95403 Score = 54.0 bits (27), Expect = 1e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 3 tcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 |||||| ||||||||| || |||||||||| |||||||||||| Sbjct: 110275 tcggcaacgtcagcaatggcggaaggatcaagtgcatgcaggt 110233 Score = 54.0 bits (27), Expect = 1e-04 Identities = 46/53 (86%) Strand = Plus / Minus Query: 41 caggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgcc 93 ||||||||||| || |||||||| |||||||||||||| ||| |||||||| Sbjct: 52316 caggtgtggccgattgagggcattaagaagttcgagactctgtcgtacttgcc 52264 Score = 50.1 bits (25), Expect = 0.002 Identities = 37/41 (90%) Strand = Plus / Minus Query: 5 ggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 |||| ||||||||| || ||||||||||| ||||||||||| Sbjct: 52455 ggcaacgtcagcaatggcggaaggatcagatgcatgcaggt 52415 Score = 44.1 bits (22), Expect = 0.11 Identities = 28/30 (93%) Strand = Plus / Minus Query: 16 caacggtggaaggatcaggtgcatgcaggt 45 |||||| |||||||||| |||||||||||| Sbjct: 107224 caacggcggaaggatcaagtgcatgcaggt 107195
>dbj|AB020945.1| Avena sativa DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ave-A Length = 590 Score = 73.8 bits (37), Expect = 1e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 |||||||| |||||||||||||||||||||||| ||||||||||| Sbjct: 91 cctcggcaacgtcagcaacggtggaaggatcagatgcatgcaggt 135 Score = 69.9 bits (35), Expect = 2e-09 Identities = 83/101 (82%) Strand = Plus / Plus Query: 41 caggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccactc 100 ||||||||||| || ||||||||||||||||||||||||||| || |||||||||| Sbjct: 223 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttatctgccaccactg 282 Query: 101 annncngaggccctccttaagcaggtcgactacctgatccg 141 ||||||||| | |||||| |||||| ||||||||| Sbjct: 283 tcagaggaggccctcttgaagcagatcgacttcctgatccg 323
>gb|AF202647.1|AF202647 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 593 Score = 69.9 bits (35), Expect = 2e-09 Identities = 83/101 (82%) Strand = Plus / Plus Query: 41 caggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccactc 100 ||||| ||||| || ||||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 219 caggtatggccgattgagggcatcaagaagttcgagaccctgtcttacctgccaccactc 278 Query: 101 annncngaggccctccttaagcaggtcgactacctgatccg 141 ||||||||||| |||||| | |||| | ||||||| Sbjct: 279 tcagaggaggccctcctgaagcagattgacttcttgatccg 319 Score = 65.9 bits (33), Expect = 3e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 5 ggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 ||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 94 ggcagcgtcagcaacggtggaagaatcagatgcatgcaggt 134
>emb|AL731739.4|CNS08C7O Oryza sativa chromosome 12, . BAC OSJNBa0056I18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145890 Score = 67.9 bits (34), Expect = 8e-09 Identities = 82/100 (82%) Strand = Plus / Plus Query: 42 aggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccactca 101 |||||||||| || |||||||||||||||||||||||||| ||| ||||||| |||| Sbjct: 82469 aggtgtggccgattgagggcatcaagaagttcgagaccctctcctacctgccaccgctca 82528 Query: 102 nnncngaggccctccttaagcaggtcgactacctgatccg 141 |||| |||||| |||||| |||| |||||| |||| Sbjct: 82529 ccgtggaggacctcctgaagcagatcgagtacctgctccg 82568 Score = 54.0 bits (27), Expect = 1e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 3 tcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 |||||| ||||||||| || || |||||||||||||||||||| Sbjct: 82327 tcggcaacgtcagcaatggcggcaggatcaggtgcatgcaggt 82369
>emb|Y00322.1|ZMRBCS Maize rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (EC 4.1.1.39) Length = 1648 Score = 65.9 bits (33), Expect = 3e-08 Identities = 42/45 (93%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 |||||||| |||||||||||| ||||||||| ||||||||||||| Sbjct: 595 cctcggcaacgtcagcaacggcggaaggatccggtgcatgcaggt 639
>emb|Y09214.1|ZMRUBSMSU Z.mays rubisco small subunit gene Length = 1274 Score = 65.9 bits (33), Expect = 3e-08 Identities = 42/45 (93%) Strand = Plus / Plus Query: 1 cctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 |||||||| |||||||||||| ||||||||| ||||||||||||| Sbjct: 300 cctcggcaacgtcagcaacggcggaaggatccggtgcatgcaggt 344 Score = 38.2 bits (19), Expect = 6.7 Identities = 37/43 (86%) Strand = Plus / Plus Query: 36 gcatgcaggtgtggcccatcgagggcatcaagaagttcgagac 78 |||||||||||||||| | | |||| ||||||||||||||| Sbjct: 453 gcatgcaggtgtggccggcctacggcaacaagaagttcgagac 495
>gb|AF202645.1|AF202645 Avena clauda clone ClG2 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 600 Score = 65.9 bits (33), Expect = 3e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 5 ggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 ||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 94 ggcagcgtcagcaacggtggaagaatcagatgcatgcaggt 134 Score = 61.9 bits (31), Expect = 5e-07 Identities = 82/101 (81%) Strand = Plus / Plus Query: 41 caggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgccaccactc 100 ||||||||||| | |||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 226 caggtgtggccgactgagggcatcaagaagttcgagaccctttcttacctgccaccactc 285 Query: 101 annncngaggccctccttaagcaggtcgactacctgatccg 141 ||||||||||| || ||| |||||| | ||||||| Sbjct: 286 tccgaggaggccctcctgaaacagatcgacttcttgatccg 326
>gb|AY023648.1| Oryza sativa microsatellite MRG5973 containing (TTC)X13, closest to marker S10704, genomic sequence Length = 239 Score = 63.9 bits (32), Expect = 1e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 42 aggtgtggcccatcgagggcatcaagaagttcgagaccct 81 |||||||||| || |||||||||||||||||||||||||| Sbjct: 173 aggtgtggccgattgagggcatcaagaagttcgagaccct 212 Score = 54.0 bits (27), Expect = 1e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 3 tcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 |||||| ||||||||| || || |||||||||||||||||||| Sbjct: 31 tcggcaacgtcagcaatggcggcaggatcaggtgcatgcaggt 73
>emb|X07515.1|OSRBCS Rice rbcS gene for ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit (EC 4.1.1.39) Length = 1110 Score = 63.9 bits (32), Expect = 1e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 42 aggtgtggcccatcgagggcatcaagaagttcgagaccct 81 |||||||||| || |||||||||||||||||||||||||| Sbjct: 492 aggtgtggccgattgagggcatcaagaagttcgagaccct 531 Score = 40.1 bits (20), Expect = 1.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 aggatcaggtgcatgcaggt 45 |||||||||||||||||||| Sbjct: 384 aggatcaggtgcatgcaggt 403
>gb|AF034479.1| Zantedeschia aethiopica ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 968 Score = 61.9 bits (31), Expect = 5e-07 Identities = 59/69 (85%) Strand = Plus / Plus Query: 33 ggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgngntacttgc 92 ||||||||||||||||||| ||||||| |||||||||||||||||| ||| ||| Sbjct: 204 ggtgcatgcaggtgtggccgccggagggcaagaagaagttcgagaccctgtcctacctgc 263 Query: 93 caccactca 101 ||||||||| Sbjct: 264 caccactca 272
>gb|DQ418485.1| Zingiber officinale ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit mRNA, partial cds; chloroplast Length = 367 Score = 58.0 bits (29), Expect = 7e-06 Identities = 44/49 (89%) Strand = Plus / Plus Query: 33 ggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 81 ||||||||||||||||||| |||||||| | ||||||||||| ||||| Sbjct: 172 ggtgcatgcaggtgtggccgatcgaggggaagaagaagttcgaaaccct 220
>emb|X17231.1|LGRBCS5B Lemna gibba rbcS gene SSU5B for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 800 Score = 58.0 bits (29), Expect = 7e-06 Identities = 59/69 (85%) Strand = Plus / Plus Query: 13 cagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagtt 72 ||||||||| || ||| | || ||||||||||||||||| |||||| |||||||||| Sbjct: 147 cagcaacggcggcagggttagctgcatgcaggtgtggccgccggagggcctcaagaagtt 206 Query: 73 cgagaccct 81 ||||||||| Sbjct: 207 cgagaccct 215
>emb|X17230.1|LGRBCS5A Lemna gibba rbcS gene SSU5A for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 858 Score = 58.0 bits (29), Expect = 7e-06 Identities = 59/69 (85%) Strand = Plus / Plus Query: 13 cagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagtt 72 ||||||||| || ||| | || ||||||||||||||||| |||||| |||||||||| Sbjct: 147 cagcaacggcggcagggttagctgcatgcaggtgtggccgccggagggcctcaagaagtt 206 Query: 73 cgagaccct 81 ||||||||| Sbjct: 207 cgagaccct 215
>emb|X00234.1|TARUB1 Wheat mRNA fragment for small subunit precursor of RuBPCase (EC 4.1.1.39) (ribulosebisphosphate carboxylase, clone 512) Length = 611 Score = 56.0 bits (28), Expect = 3e-05 Identities = 45/52 (86%) Strand = Plus / Plus Query: 90 tgccaccactcannncngaggccctccttaagcaggtcgactacctgatccg 141 ||||||| |||| | ||||||||||| |||||||| |||||||||||||| Sbjct: 8 tgccaccgctcagcacggaggccctcctcaagcaggtggactacctgatccg 59
>gb|M86717.1|SCFBCS1A Saccharum hybrid cultivar H32-8560 ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit gene, complete cds Length = 2328 Score = 54.0 bits (27), Expect = 1e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 11 gtcagcaacggtggaaggatcaggtgcatgcaggt 45 ||||||||||| ||||||||| ||||||||||||| Sbjct: 1283 gtcagcaacggcggaaggatccggtgcatgcaggt 1317
>dbj|AB067656.1| Oryza sativa (japonica cultivar-group) OsrbcS gene for small subunit of ribulose-1,5-bisphosphate carboxylase, promoter region and partial cds Length = 1815 Score = 54.0 bits (27), Expect = 1e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 3 tcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 45 |||||| ||||||||| || || |||||||||||||||||||| Sbjct: 1657 tcggcaacgtcagcaatggcggcaggatcaggtgcatgcaggt 1699
>gb|BT012936.1| Lycopersicon esculentum clone 114099R, mRNA sequence Length = 1261 Score = 52.0 bits (26), Expect = 4e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 14 agcaacggtggaaggatcaggtgcatgcaggtgtggcc 51 |||||||||||||| |||| ||||||||||||||||| Sbjct: 734 agcaacggtggaagagtcagttgcatgcaggtgtggcc 771
>emb|X17234.1|LGRBCS4B Lemna gibba rbcS gene SSU40B for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 791 Score = 50.1 bits (25), Expect = 0.002 Identities = 58/69 (84%) Strand = Plus / Plus Query: 13 cagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagtt 72 ||||||||| || ||| | || ||||||||||||||||| |||||| | |||||||| Sbjct: 147 cagcaacggcggcagggttagctgcatgcaggtgtggccgccggagggcctgaagaagtt 206 Query: 73 cgagaccct 81 ||||||||| Sbjct: 207 cgagaccct 215
>gb|AF039014.1|AF039014 Fritillaria agrestis clone TA8 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 592 Score = 48.1 bits (24), Expect = 0.007 Identities = 36/40 (90%) Strand = Plus / Plus Query: 42 aggtgtggcccatcgagggcatcaagaagttcgagaccct 81 ||||||||||||||| ||| | ||||||||||||||||| Sbjct: 244 aggtgtggcccatcgtggggttgaagaagttcgagaccct 283
>gb|AF039011.1|AF039011 Fritillaria agrestis clone TA22 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 591 Score = 48.1 bits (24), Expect = 0.007 Identities = 36/40 (90%) Strand = Plus / Plus Query: 42 aggtgtggcccatcgagggcatcaagaagttcgagaccct 81 ||||||||||||||| ||| | ||||||||||||||||| Sbjct: 243 aggtgtggcccatcgtggggttgaagaagttcgagaccct 282
>gb|AF039008.1|AF039008 Fritillaria agrestis clone TA15 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 592 Score = 48.1 bits (24), Expect = 0.007 Identities = 36/40 (90%) Strand = Plus / Plus Query: 42 aggtgtggcccatcgagggcatcaagaagttcgagaccct 81 ||||||||||||||| ||| | ||||||||||||||||| Sbjct: 244 aggtgtggcccatcgtggggttgaagaagttcgagaccct 283
>emb|X00137.1|LGRUBP Lemna gibba ribulose 1.5-bisphospate carboxylase small subunit (cDNA clone pLg ssu1) Length = 776 Score = 46.1 bits (23), Expect = 0.028 Identities = 41/47 (87%) Strand = Plus / Plus Query: 35 tgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 81 ||||||||||||||||| |||||| | ||||||||||||||||| Sbjct: 172 tgcatgcaggtgtggccgccggagggcctgaagaagttcgagaccct 218
>emb|X17233.1|LGRBCS4A Lemna gibba rbcS gene SSU40A for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 791 Score = 46.1 bits (23), Expect = 0.028 Identities = 41/47 (87%) Strand = Plus / Plus Query: 35 tgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 81 ||||||||||||||||| |||||| | ||||||||||||||||| Sbjct: 169 tgcatgcaggtgtggccgccggagggcctgaagaagttcgagaccct 215
>emb|X17232.1|LGRBCS26 Lemna gibba rbcS gene SSU26 for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 936 Score = 46.1 bits (23), Expect = 0.028 Identities = 41/47 (87%) Strand = Plus / Plus Query: 35 tgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 81 ||||||||||||||||| |||||| |||||||||| |||||||| Sbjct: 169 tgcatgcaggtgtggccgccggagggcctcaagaagtttgagaccct 215
>emb|X17235.1|LGRBCS1 Lemna gibba rbcS mRNA SSU1 for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 764 Score = 46.1 bits (23), Expect = 0.028 Identities = 41/47 (87%) Strand = Plus / Plus Query: 35 tgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 81 ||||||||||||||||| |||||| | ||||||||||||||||| Sbjct: 157 tgcatgcaggtgtggccgccggagggcctgaagaagttcgagaccct 203
>emb|AJ419826.1|CAR419826 Coffea arabica mRNA for rubisco small subunit (rbcs1 gene) Length = 934 Score = 40.1 bits (20), Expect = 1.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 16 caacggtggaaggatcaggtgcatgcaggtgtggcc 51 |||||||||||| || |||||||||||||||||| Sbjct: 203 caacggtggaagagtccagtgcatgcaggtgtggcc 238
>emb|X05986.1|LERBCS3C Tomato rbcS3C gene for ribulose 1,5-biphosp[hate carboxylase/oxygenase small subunit Length = 1341 Score = 40.1 bits (20), Expect = 1.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 14 agcaacggtggaaggatcaggtgcatgcaggt 45 |||||||||||||| |||| ||||||||||| Sbjct: 445 agcaacggtggaagagtcagttgcatgcaggt 476
>emb|X05985.1|LERBCS3B Tomato rbcS3B gene for ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit Length = 1054 Score = 40.1 bits (20), Expect = 1.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 14 agcaacggtggaaggatcaggtgcatgcaggt 45 |||||||||||||| |||| ||||||||||| Sbjct: 428 agcaacggtggaagagtcagttgcatgcaggt 459
>emb|X05984.1|LERBCS3A Tomato rbcS3A gene for ribulose 1,5-bisphosphate carboxylae/oxygenase small subunit Length = 1520 Score = 40.1 bits (20), Expect = 1.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 14 agcaacggtggaaggatcaggtgcatgcaggt 45 |||||||||||||| |||| ||||||||||| Sbjct: 525 agcaacggtggaagagtcagttgcatgcaggt 556
>gb|AF039015.1|AF039015 Fritillaria agrestis clone TA1 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 595 Score = 40.1 bits (20), Expect = 1.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 42 aggtgtggcccatcgagggcatcaagaagttcgagaccct 81 |||| |||||||||| ||| | ||||||||||||||||| Sbjct: 244 aggtctggcccatcgtggggttgaagaagttcgagaccct 283
>gb|AF039013.1|AF039013 Fritillaria agrestis clone TA26 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 595 Score = 40.1 bits (20), Expect = 1.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 42 aggtgtggcccatcgagggcatcaagaagttcgagaccct 81 |||| |||||||||| ||| | ||||||||||||||||| Sbjct: 244 aggtctggcccatcgtggggttgaagaagttcgagaccct 283
>gb|AF039012.1|AF039012 Fritillaria agrestis clone TA27 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 595 Score = 40.1 bits (20), Expect = 1.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 42 aggtgtggcccatcgagggcatcaagaagttcgagaccct 81 |||| |||||||||| ||| | ||||||||||||||||| Sbjct: 244 aggtctggcccatcgtggggttgaagaagttcgagaccct 283
>gb|AF039010.1|AF039010 Fritillaria agrestis clone TA24 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 595 Score = 40.1 bits (20), Expect = 1.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 42 aggtgtggcccatcgagggcatcaagaagttcgagaccct 81 |||| |||||||||| ||| | ||||||||||||||||| Sbjct: 244 aggtctggcccatcgtggggttgaagaagttcgagaccct 283
>gb|AF039009.1|AF039009 Fritillaria agrestis clone TA23 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 595 Score = 40.1 bits (20), Expect = 1.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 42 aggtgtggcccatcgagggcatcaagaagttcgagaccct 81 |||| |||||||||| ||| | ||||||||||||||||| Sbjct: 244 aggtctggcccatcgtggggttgaagaagttcgagaccct 283
>gb|AF039007.1|AF039007 Fritillaria agrestis clone TA10 rbcS pseudogene, partial sequence Length = 584 Score = 40.1 bits (20), Expect = 1.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 42 aggtgtggcccatcgagggcatcaagaagttcgagaccct 81 |||| |||||||||| ||| | ||||||||||||||||| Sbjct: 233 aggtctggcccatcgtggggttgaagaagttcgagaccct 272
>gb|AF039006.1|AF039006 Fritillaria agrestis clone TA17 rbcS pseudogene, partial sequence Length = 584 Score = 40.1 bits (20), Expect = 1.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 42 aggtgtggcccatcgagggcatcaagaagttcgagaccct 81 |||| |||||||||| ||| | ||||||||||||||||| Sbjct: 233 aggtctggcccatcgtggggttgaagaagttcgagaccct 272
>gb|AF039004.1|AF039004 Fritillaria agrestis clone TA9 rbcS pseudogene, partial sequence Length = 594 Score = 40.1 bits (20), Expect = 1.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 42 aggtgtggcccatcgagggcatcaagaagttcgagaccct 81 |||| |||||||||| ||| | ||||||||||||||||| Sbjct: 244 aggtctggcccatcgtggggttgaagaagttcgagaccct 283
>gb|AF031544.1|AF031544 Fritillaria agrestis ribulose 1,5 bisphosphate carboxylase small subunit type V (rbcS5) mRNA, complete cds Length = 728 Score = 40.1 bits (20), Expect = 1.7 Identities = 41/48 (85%) Strand = Plus / Plus Query: 34 gtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 81 ||||||| | || |||||||||| ||| | ||||||||||||||||| Sbjct: 214 gtgcatgaaagtctggcccatcgtggggttgaagaagttcgagaccct 261
>gb|AF031543.1|AF031543 Fritillaria agrestis ribulose 1,5 bisphosphate carboxylase small subunit type IV (rbcS4) mRNA, complete cds Length = 732 Score = 40.1 bits (20), Expect = 1.7 Identities = 41/48 (85%) Strand = Plus / Plus Query: 34 gtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 81 ||||||| | || |||||||||| ||| | ||||||||||||||||| Sbjct: 187 gtgcatgaaagtctggcccatcgtggggttgaagaagttcgagaccct 234
>gb|AF024574.1|AF024574 Fritillaria agrestis ribulose 1,5 bisphosphate carboxylase, small subunit type III (rbcS3) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 798 Score = 40.1 bits (20), Expect = 1.7 Identities = 41/48 (85%) Strand = Plus / Plus Query: 34 gtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 81 ||||||| | || |||||||||| ||| | ||||||||||||||||| Sbjct: 192 gtgcatgaaagtctggcccatcgtggggttgaagaagttcgagaccct 239
>gb|AF024573.1|AF024573 Fritillaria agrestis ribulose 1,5 bisphosphate carboxylase, small subunit type II (rbcS2) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 784 Score = 40.1 bits (20), Expect = 1.7 Identities = 41/48 (85%) Strand = Plus / Plus Query: 34 gtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 81 ||||||| | || |||||||||| ||| | ||||||||||||||||| Sbjct: 190 gtgcatgaaagtctggcccatcgtggggttgaagaagttcgagaccct 237
>gb|AF024572.1|AF024572 Fritillaria agrestis ribulose 1,5 bisphosphate carboxylase, small subunit type I (rbcS1) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 713 Score = 40.1 bits (20), Expect = 1.7 Identities = 41/48 (85%) Strand = Plus / Plus Query: 34 gtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 81 ||||||| | || |||||||||| ||| | ||||||||||||||||| Sbjct: 186 gtgcatgaaagtctggcccatcgtggggttgaagaagttcgagaccct 233
>gb|M13544.1|TOMRBCSC Tomato (L.esculentum) ribulose-1,5-bisphosphate carboxylase/oxygenase (RBCS) small subunit gene, clone Rbcs-3A Length = 1027 Score = 40.1 bits (20), Expect = 1.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 14 agcaacggtggaaggatcaggtgcatgcaggt 45 |||||||||||||| |||| ||||||||||| Sbjct: 283 agcaacggtggaagagtcagttgcatgcaggt 314
>gb|M31640.1|CIPRBC Ice plant ribulose-1-5-bisphosphate carboxylase (rbc5) gene, complete cds Length = 776 Score = 40.1 bits (20), Expect = 1.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 16 caacggtggaaggatcaggtgcatgcaggtgtggcc 51 |||||||||||| || |||||||||||||||||| Sbjct: 186 caacggtggaagagtccagtgcatgcaggtgtggcc 221
>dbj|D11112.1|TOMRBCO Tomato ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit gene, complete cds Length = 4124 Score = 40.1 bits (20), Expect = 1.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 14 agcaacggtggaaggatcaggtgcatgcaggt 45 |||||||||||||| |||| ||||||||||| Sbjct: 3498 agcaacggtggaagagtcagttgcatgcaggt 3529
>dbj|AB047542.1| Lilium longiflorum rbcS mRNA for ribulose 1,5 bisphosphate carboxylase small subunit, partial cds Length = 323 Score = 40.1 bits (20), Expect = 1.7 Identities = 41/48 (85%) Strand = Plus / Plus Query: 34 gtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 81 ||||||| | || |||||||||| ||| | ||||||||||||||||| Sbjct: 131 gtgcatgaaagtctggcccatcgtggggaagaagaagttcgagaccct 178
>emb|AL121958.6|HSDJ71H19 Human DNA sequence from clone RP1-71H19 on chromosome 6 Contains part of the PRIM2A gene for primase polypeptide 2A (58kD) and a novel gene, complete sequence Length = 138411 Score = 38.2 bits (19), Expect = 6.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 30 tcaggtgcatgcaggtgtg 48 ||||||||||||||||||| Sbjct: 78147 tcaggtgcatgcaggtgtg 78129
>gb|AC183417.2| Pan troglodytes BAC clone CH251-173K9 from chromosome 6, complete sequence Length = 158234 Score = 38.2 bits (19), Expect = 6.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 30 tcaggtgcatgcaggtgtg 48 ||||||||||||||||||| Sbjct: 40463 tcaggtgcatgcaggtgtg 40445
>gb|AC182461.3| Pan troglodytes BAC clone CH251-673H10 from chromosome 6, complete sequence Length = 188415 Score = 38.2 bits (19), Expect = 6.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 30 tcaggtgcatgcaggtgtg 48 ||||||||||||||||||| Sbjct: 27952 tcaggtgcatgcaggtgtg 27970
>ref|NM_167358.1| Drosophila melanogaster Inositol 1,4,5-triphosphate kinase 2 CG1630-RB, transcript variant B (IP3K2), mRNA Length = 2816 Score = 38.2 bits (19), Expect = 6.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 52 catcgagggcatcaagaag 70 ||||||||||||||||||| Sbjct: 1769 catcgagggcatcaagaag 1787
>ref|NM_132647.1| Drosophila melanogaster Inositol 1,4,5-triphosphate kinase 2 CG1630-RA, transcript variant A (IP3K2), mRNA Length = 2695 Score = 38.2 bits (19), Expect = 6.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 52 catcgagggcatcaagaag 70 ||||||||||||||||||| Sbjct: 1648 catcgagggcatcaagaag 1666
>gb|AY084158.1| Drosophila melanogaster RE35745 full insert cDNA Length = 2694 Score = 38.2 bits (19), Expect = 6.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 52 catcgagggcatcaagaag 70 ||||||||||||||||||| Sbjct: 1648 catcgagggcatcaagaag 1666
>gb|AC001228.1|HSAC001228 244Kb Contig from Human Chromosome 11p15.5 spanning D11S1 through D11S25, complete sequence Length = 244254 Score = 38.2 bits (19), Expect = 6.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 36 gcatgcaggtgtggcccat 54 ||||||||||||||||||| Sbjct: 145102 gcatgcaggtgtggcccat 145084
>gb|AC131971.9| Homo sapiens chromosome 11, clone CTC-343N3, complete sequence Length = 176226 Score = 38.2 bits (19), Expect = 6.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 36 gcatgcaggtgtggcccat 54 ||||||||||||||||||| Sbjct: 130575 gcatgcaggtgtggcccat 130593
>dbj|AK109003.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-H01, full insert sequence Length = 1188 Score = 38.2 bits (19), Expect = 6.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 54 tcgagggcatcaagaagtt 72 ||||||||||||||||||| Sbjct: 232 tcgagggcatcaagaagtt 250
>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome Length = 4096345 Score = 38.2 bits (19), Expect = 6.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 54 tcgagggcatcaagaagtt 72 ||||||||||||||||||| Sbjct: 3271259 tcgagggcatcaagaagtt 3271277
>gb|U51281.1|HSU51281 Human chromosome 11 cosmid cSRL-87f11 Length = 37972 Score = 38.2 bits (19), Expect = 6.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 36 gcatgcaggtgtggcccat 54 ||||||||||||||||||| Sbjct: 17862 gcatgcaggtgtggcccat 17880 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 907,216 Number of Sequences: 3902068 Number of extensions: 907216 Number of successful extensions: 57796 Number of sequences better than 10.0: 142 Number of HSP's better than 10.0 without gapping: 138 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 57513 Number of HSP's gapped (non-prelim): 257 length of query: 141 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 120 effective length of database: 17,151,101,840 effective search space: 2058132220800 effective search space used: 2058132220800 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
