ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd20f12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_473946.1| Oryza sativa (japonica cultivar-group), predic... 143 2e-31
2dbj|AK121268.1| Oryza sativa (japonica cultivar-group) cDNA clon... 143 2e-31
3ref|XM_480477.1| Oryza sativa (japonica cultivar-group), mRNA 119 4e-24
4ref|XM_507153.1| PREDICTED Oryza sativa (japonica cultivar-group... 119 4e-24
5dbj|AK121169.1| Oryza sativa (japonica cultivar-group) cDNA clon... 119 4e-24
6dbj|AK062573.1| Oryza sativa (japonica cultivar-group) cDNA clon... 119 4e-24
7gb|AY103879.1| Zea mays PCO136243 mRNA sequence 111 9e-22
8gb|AY109516.1| Zea mays CL5703_1 mRNA sequence 105 5e-20
9ref|NM_118319.2| Arabidopsis thaliana APG8A AT4G21980 (APG8A) mR... 74 2e-10
10gb|AF492759.1| Arabidopsis thaliana autophagy APG8 (APG8A) mRNA,... 74 2e-10
11gb|BT006522.1| Arabidopsis thaliana At4g21980 gene, complete cds 74 2e-10
12gb|AY085349.1| Arabidopsis thaliana clone 14759 mRNA, complete s... 74 2e-10
13gb|BT002024.1| Arabidopsis thaliana symbiosis-related like prote... 74 2e-10
14dbj|AB073175.1| Arabidopsis thaliana AtAPG8a mRNA for autophagy ... 74 2e-10
15ref|XM_478369.1| Oryza sativa (japonica cultivar-group), mRNA 70 3e-09
16gb|BT018485.1| Zea mays clone EL01N0424D10.d mRNA sequence 70 3e-09
17emb|AL606645.2|OSJN00079 Oryza sativa genomic DNA, chromosome 4,... 70 3e-09
18emb|AJ417518.1|OSA417518 Oryza sativa partial mRNA for putative ... 70 3e-09
19dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 70 3e-09
20dbj|AK059939.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 3e-09
21gb|DQ269983.1| Oryza sativa (indica cultivar-group) autophagy 8 ... 70 3e-09
22gb|AF542187.1| Triticum aestivum autophagy mRNA, complete cds 62 7e-07
23ref|NM_179064.2| Arabidopsis thaliana microtubule binding AT4G16... 58 1e-05
24ref|NM_117751.2| Arabidopsis thaliana microtubule binding AT4G16... 58 1e-05
25gb|AY091667.1| Arabidopsis thaliana AT4g16520/dl4285c mRNA, comp... 58 1e-05
26gb|AY070464.1| Arabidopsis thaliana AT4g16520/dl4285c mRNA, comp... 58 1e-05
27emb|BX826371.1|CNS0A2HK Arabidopsis thaliana Full-length cDNA Co... 58 1e-05
28gb|AY085763.1| Arabidopsis thaliana clone 17851 mRNA, complete s... 58 1e-05
29dbj|AB073180.1| Arabidopsis thaliana AtAPG8f mRNA for autophagy ... 58 1e-05
30gb|DQ078759.1| Saccharum officinarum microtubule associated prot... 56 4e-05
31dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 52 7e-04
32dbj|AP005441.3| Oryza sativa (japonica cultivar-group) genomic D... 52 7e-04
33gb|AY104735.1| Zea mays PCO136400 mRNA sequence 48 0.011
34gb|AC138087.17| Medicago truncatula clone mth2-22p8, complete se... 46 0.043
35emb|AJ489614.1|CAR489614 Cicer arietinum mRNA for microtubule as... 46 0.043
36ref|XM_567139.1| Cryptococcus neoformans var. neoformans JEC21 m... 44 0.17
37emb|Z97341.2|ATFCA6 Arabidopsis thaliana DNA chromosome 4, ESSA ... 44 0.17
38emb|AL161556.2|ATCHRIV56 Arabidopsis thaliana DNA chromosome 4, ... 44 0.17
39emb|AL161544.2|ATCHRIV44 Arabidopsis thaliana DNA chromosome 4, ... 44 0.17
40emb|AL022140.1|ATF1N20 Arabidopsis thaliana DNA chromosome 4, BA... 44 0.17
41emb|AL021890.1|ATT8O5 Arabidopsis thaliana DNA chromosome 4, BAC... 44 0.17
42emb|BX824754.1|CNS0A5JQ Arabidopsis thaliana Full-length cDNA Co... 44 0.17
43emb|AL672238.1| Human DNA sequence from clone RP11-293G6 on chro... 42 0.67
44ref|XM_525579.1| PREDICTED: Pan troglodytes heme oxygenase (decy... 40 2.6
45emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 2.6
46gb|AY460337.1| Homo sapiens heme oxygenase (decycling) 1 (HMOX1)... 40 2.6
47emb|Z82244.1|HS286B10 Human DNA sequence from clone CTA-286B10 o... 40 2.6
48emb|CR860175.1| Pongo pygmaeus mRNA; cDNA DKFZp469G141 (from clo... 40 2.6
49emb|CR623301.1| full-length cDNA clone CS0DI029YM22 of Placenta ... 40 2.6
50emb|CR603909.1| full-length cDNA clone CS0DI041YF16 of Placenta ... 40 2.6
51gb|AE011792.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 2.6
52gb|AC023162.41| Homo sapiens 3 BAC RP11-263I1 (Roswell Park Canc... 40 2.6
53emb|CR456505.1| Homo sapiens HMOX1 full length open reading fram... 40 2.6
54emb|AL449213.4|HS344J2 Homo sapiens chromosome 3 sequence from B... 40 2.6
55emb|X14782.2|HSHO5G Human HO-1 gene for heme oxygenase-1, exon 1 40 2.6 
>ref|XM_473946.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 360

 Score =  143 bits (72), Expect = 2e-31
 Identities = 102/112 (91%)
 Strand = Plus / Plus

                                                                       
Query: 25  atggccaagagctcgttcaagctggagcacccgctcgagaggaggcaggcggaggctaac 84
           |||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||
Sbjct: 1   atggccaagagctcgttcaagctggaccacacgctcgagaggaggcaggctgaggctaac 60

                                                               
Query: 85  cgcataagagagaagtactctgacagaattcctgtgatcgttgagaaggctg 136
           || || ||||| ||||||  |||||||||||||||||| |||||||| ||||
Sbjct: 61  cgtatcagagaaaagtacagtgacagaattcctgtgattgttgagaaagctg 112
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>dbj|AK121268.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105G11, full
           insert sequence
          Length = 777

 Score =  143 bits (72), Expect = 2e-31
 Identities = 102/112 (91%)
 Strand = Plus / Plus

                                                                       
Query: 25  atggccaagagctcgttcaagctggagcacccgctcgagaggaggcaggcggaggctaac 84
           |||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||
Sbjct: 243 atggccaagagctcgttcaagctggaccacacgctcgagaggaggcaggctgaggctaac 302

                                                               
Query: 85  cgcataagagagaagtactctgacagaattcctgtgatcgttgagaaggctg 136
           || || ||||| ||||||  |||||||||||||||||| |||||||| ||||
Sbjct: 303 cgtatcagagaaaagtacagtgacagaattcctgtgattgttgagaaagctg 354
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>ref|XM_480477.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 711

 Score =  119 bits (60), Expect = 4e-24
 Identities = 154/185 (83%), Gaps = 1/185 (0%)
 Strand = Plus / Plus

                                                                       
Query: 24  gatggccaagagctcgttcaagctggagcacccgctcgagaggaggcaggcggaggctaa 83
           |||||| | |||||||||||||||||||||||| ||||| ||||||||||| ||||| ||
Sbjct: 104 gatggcgaggagctcgttcaagctggagcacccactcgaaaggaggcaggctgaggccaa 163

                                                                       
Query: 84  ccgcataagagagaagtactctgacagaattcctgtgatcgttgagaaggctgggaagag 143
           |||||| || ||||||||  | || ||||||||||| || ||||||||||||| || |||
Sbjct: 164 ccgcatcagggagaagtatcccgatagaattcctgtcattgttgagaaggctgagaggag 223

                                                                       
Query: 144 tgatnttggctgacattgacaagaatttnttccttgtnccagctgatcttacagttggac 203
           |||  ||  ||||||||||||| ||    | |||||| || ||||| || || |||||||
Sbjct: 224 tgacatt-cctgacattgacaaaaagaagtaccttgttcccgctgacctcacggttggac 282

                
Query: 204 agttt 208
           |||||
Sbjct: 283 agttt 287
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>ref|XM_507153.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0056O06.5
           mRNA
          Length = 729

 Score =  119 bits (60), Expect = 4e-24
 Identities = 154/185 (83%), Gaps = 1/185 (0%)
 Strand = Plus / Plus

                                                                       
Query: 24  gatggccaagagctcgttcaagctggagcacccgctcgagaggaggcaggcggaggctaa 83
           |||||| | |||||||||||||||||||||||| ||||| ||||||||||| ||||| ||
Sbjct: 125 gatggcgaggagctcgttcaagctggagcacccactcgaaaggaggcaggctgaggccaa 184

                                                                       
Query: 84  ccgcataagagagaagtactctgacagaattcctgtgatcgttgagaaggctgggaagag 143
           |||||| || ||||||||  | || ||||||||||| || ||||||||||||| || |||
Sbjct: 185 ccgcatcagggagaagtatcccgatagaattcctgtcattgttgagaaggctgagaggag 244

                                                                       
Query: 144 tgatnttggctgacattgacaagaatttnttccttgtnccagctgatcttacagttggac 203
           |||  ||  ||||||||||||| ||    | |||||| || ||||| || || |||||||
Sbjct: 245 tgacatt-cctgacattgacaaaaagaagtaccttgttcccgctgacctcacggttggac 303

                
Query: 204 agttt 208
           |||||
Sbjct: 304 agttt 308
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>dbj|AK121169.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023080P16, full
           insert sequence
          Length = 729

 Score =  119 bits (60), Expect = 4e-24
 Identities = 154/185 (83%), Gaps = 1/185 (0%)
 Strand = Plus / Plus

                                                                       
Query: 24  gatggccaagagctcgttcaagctggagcacccgctcgagaggaggcaggcggaggctaa 83
           |||||| | |||||||||||||||||||||||| ||||| ||||||||||| ||||| ||
Sbjct: 125 gatggcgaggagctcgttcaagctggagcacccactcgaaaggaggcaggctgaggccaa 184

                                                                       
Query: 84  ccgcataagagagaagtactctgacagaattcctgtgatcgttgagaaggctgggaagag 143
           |||||| || ||||||||  | || ||||||||||| || ||||||||||||| || |||
Sbjct: 185 ccgcatcagggagaagtatcccgatagaattcctgtcattgttgagaaggctgagaggag 244

                                                                       
Query: 144 tgatnttggctgacattgacaagaatttnttccttgtnccagctgatcttacagttggac 203
           |||  ||  ||||||||||||| ||    | |||||| || ||||| || || |||||||
Sbjct: 245 tgacatt-cctgacattgacaaaaagaagtaccttgttcccgctgacctcacggttggac 303

                
Query: 204 agttt 208
           |||||
Sbjct: 304 agttt 308
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>dbj|AK062573.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-G05, full
           insert sequence
          Length = 711

 Score =  119 bits (60), Expect = 4e-24
 Identities = 154/185 (83%), Gaps = 1/185 (0%)
 Strand = Plus / Plus

                                                                       
Query: 24  gatggccaagagctcgttcaagctggagcacccgctcgagaggaggcaggcggaggctaa 83
           |||||| | |||||||||||||||||||||||| ||||| ||||||||||| ||||| ||
Sbjct: 104 gatggcgaggagctcgttcaagctggagcacccactcgaaaggaggcaggctgaggccaa 163

                                                                       
Query: 84  ccgcataagagagaagtactctgacagaattcctgtgatcgttgagaaggctgggaagag 143
           |||||| || ||||||||  | || ||||||||||| || ||||||||||||| || |||
Sbjct: 164 ccgcatcagggagaagtatcccgatagaattcctgtcattgttgagaaggctgagaggag 223

                                                                       
Query: 144 tgatnttggctgacattgacaagaatttnttccttgtnccagctgatcttacagttggac 203
           |||  ||  ||||||||||||| ||    | |||||| || ||||| || || |||||||
Sbjct: 224 tgacatt-cctgacattgacaaaaagaagtaccttgttcccgctgacctcacggttggac 282

                
Query: 204 agttt 208
           |||||
Sbjct: 283 agttt 287
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>gb|AY103879.1| Zea mays PCO136243 mRNA sequence
          Length = 908

 Score =  111 bits (56), Expect = 9e-22
 Identities = 98/112 (87%)
 Strand = Plus / Plus

                                                                       
Query: 23  cgatggccaagagctcgttcaagctggagcacccgctcgagaggaggcaggcggaggcta 82
           ||||||| | ||||||||||||||||||||||||  |||| |||||||| || |||||||
Sbjct: 266 cgatggcgaggagctcgttcaagctggagcaccccttcgaaaggaggcaagctgaggcta 325

                                                               
Query: 83  accgcataagagagaagtactctgacagaattcctgtgatcgttgagaaggc 134
           ||||||| || ||||||||| | || ||||||||||| || |||||||||||
Sbjct: 326 accgcatcagggagaagtaccccgatagaattcctgtcattgttgagaaggc 377
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>gb|AY109516.1| Zea mays CL5703_1 mRNA sequence
          Length = 1046

 Score =  105 bits (53), Expect = 5e-20
 Identities = 140/172 (81%), Gaps = 1/172 (0%)
 Strand = Plus / Plus

                                                                       
Query: 33  gagctcgttcaagctggagcacccgctcgagaggaggcaggcggaggctaaccgcataag 92
           |||||||||||||||||||||     | |||| ||||||| | |||||||| || || ||
Sbjct: 149 gagctcgttcaagctggagcannnnnttgagaagaggcagtctgaggctaatcggatcag 208

                                                                       
Query: 93  agagaagtactctgacagaattcctgtgatcgttgagaaggctgggaagagtgatnttgg 152
           |||||||||| ||||||||||||| ||||| ||||||||||||| || ||||||  ||  
Sbjct: 209 agagaagtaccctgacagaattccagtgattgttgagaaggctgagaggagtgacatt-c 267

                                                               
Query: 153 ctgacattgacaagaatttnttccttgtnccagctgatcttacagttggaca 204
           ||||||| ||||||      | |||||| || ||||||||||| ||||||||
Sbjct: 268 ctgacatcgacaagnnnnngtaccttgtccctgctgatcttacggttggaca 319
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>ref|NM_118319.2| Arabidopsis thaliana APG8A AT4G21980 (APG8A) mRNA, complete cds
          Length = 591

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 95/114 (83%), Gaps = 1/114 (0%)
 Strand = Plus / Plus

                                                                       
Query: 91  agagagaagtactctgacagaattcctgtgatcgttgagaaggctgggaagagtgatntt 150
           |||||||||||| ||||||||||||| ||||| || |||||||||||  | |||||| ||
Sbjct: 130 agagagaagtaccctgacagaattcccgtgattgtggagaaggctggacaaagtgatgtt 189

                                                                 
Query: 151 ggctgacattgacaagaatttnttccttgtnccagctgatcttacagttggaca 204
             ||||||||||||||||    |  ||||| ||||||||||| ||||| |||||
Sbjct: 190 -cctgacattgacaagaagaagtatcttgtaccagctgatctaacagtgggaca 242
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>gb|AF492759.1| Arabidopsis thaliana autophagy APG8 (APG8A) mRNA, complete cds
          Length = 369

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 95/114 (83%), Gaps = 1/114 (0%)
 Strand = Plus / Plus

                                                                       
Query: 91  agagagaagtactctgacagaattcctgtgatcgttgagaaggctgggaagagtgatntt 150
           |||||||||||| ||||||||||||| ||||| || |||||||||||  | |||||| ||
Sbjct: 67  agagagaagtaccctgacagaattcccgtgattgtggagaaggctggacaaagtgatgtt 126

                                                                 
Query: 151 ggctgacattgacaagaatttnttccttgtnccagctgatcttacagttggaca 204
             ||||||||||||||||    |  ||||| ||||||||||| ||||| |||||
Sbjct: 127 -cctgacattgacaagaagaagtatcttgtaccagctgatctaacagtgggaca 179
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>gb|BT006522.1| Arabidopsis thaliana At4g21980 gene, complete cds
          Length = 369

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 95/114 (83%), Gaps = 1/114 (0%)
 Strand = Plus / Plus

                                                                       
Query: 91  agagagaagtactctgacagaattcctgtgatcgttgagaaggctgggaagagtgatntt 150
           |||||||||||| ||||||||||||| ||||| || |||||||||||  | |||||| ||
Sbjct: 67  agagagaagtaccctgacagaattcccgtgattgtggagaaggctggacaaagtgatgtt 126

                                                                 
Query: 151 ggctgacattgacaagaatttnttccttgtnccagctgatcttacagttggaca 204
             ||||||||||||||||    |  ||||| ||||||||||| ||||| |||||
Sbjct: 127 -cctgacattgacaagaagaagtatcttgtaccagctgatctaacagtgggaca 179
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>gb|AY085349.1| Arabidopsis thaliana clone 14759 mRNA, complete sequence
          Length = 732

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 95/114 (83%), Gaps = 1/114 (0%)
 Strand = Plus / Plus

                                                                       
Query: 91  agagagaagtactctgacagaattcctgtgatcgttgagaaggctgggaagagtgatntt 150
           |||||||||||| ||||||||||||| ||||| || |||||||||||  | |||||| ||
Sbjct: 271 agagagaagtaccctgacagaattcccgtgattgtggagaaggctggacaaagtgatgtt 330

                                                                 
Query: 151 ggctgacattgacaagaatttnttccttgtnccagctgatcttacagttggaca 204
             ||||||||||||||||    |  ||||| ||||||||||| ||||| |||||
Sbjct: 331 -cctgacattgacaagaagaagtatcttgtaccagctgatctaacagtgggaca 383
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>gb|BT002024.1| Arabidopsis thaliana symbiosis-related like protein (At4g21980)
           mRNA, complete cds
          Length = 587

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 95/114 (83%), Gaps = 1/114 (0%)
 Strand = Plus / Plus

                                                                       
Query: 91  agagagaagtactctgacagaattcctgtgatcgttgagaaggctgggaagagtgatntt 150
           |||||||||||| ||||||||||||| ||||| || |||||||||||  | |||||| ||
Sbjct: 129 agagagaagtaccctgacagaattcccgtgattgtggagaaggctggacaaagtgatgtt 188

                                                                 
Query: 151 ggctgacattgacaagaatttnttccttgtnccagctgatcttacagttggaca 204
             ||||||||||||||||    |  ||||| ||||||||||| ||||| |||||
Sbjct: 189 -cctgacattgacaagaagaagtatcttgtaccagctgatctaacagtgggaca 241
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>dbj|AB073175.1| Arabidopsis thaliana AtAPG8a mRNA for autophagy 8a, complete cds
          Length = 635

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 95/114 (83%), Gaps = 1/114 (0%)
 Strand = Plus / Plus

                                                                       
Query: 91  agagagaagtactctgacagaattcctgtgatcgttgagaaggctgggaagagtgatntt 150
           |||||||||||| ||||||||||||| ||||| || |||||||||||  | |||||| ||
Sbjct: 164 agagagaagtaccctgacagaattcccgtgattgtggagaaggctggacaaagtgatgtt 223

                                                                 
Query: 151 ggctgacattgacaagaatttnttccttgtnccagctgatcttacagttggaca 204
             ||||||||||||||||    |  ||||| ||||||||||| ||||| |||||
Sbjct: 224 -cctgacattgacaagaagaagtatcttgtaccagctgatctaacagtgggaca 276
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>ref|XM_478369.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 952

 Score = 69.9 bits (35), Expect = 3e-09
 Identities = 41/43 (95%)
 Strand = Plus / Plus

                                                      
Query: 94  gagaagtactctgacagaattcctgtgatcgttgagaaggctg 136
           ||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 198 gagaagtactcagacagaattccggtgatcgttgagaaggctg 240
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>gb|BT018485.1| Zea mays clone EL01N0424D10.d mRNA sequence
          Length = 1475

 Score = 69.9 bits (35), Expect = 3e-09
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                       
Query: 64  aggaggcaggcggaggctaaccgcataagagagaagtactctgacagaattcctgtgatc 123
           |||||||| || |||||||||||||| || ||||||||| | || ||||||||||| || 
Sbjct: 443 aggaggcaagctgaggctaaccgcatcagggagaagtaccccgatagaattcctgtcatt 502

                      
Query: 124 gttgagaaggc 134
           |||||||||||
Sbjct: 503 gttgagaaggc 513
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>emb|AL606645.2|OSJN00079 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053K19,
             complete sequence
          Length = 187601

 Score = 69.9 bits (35), Expect = 3e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                        
Query: 61    gagaggaggcaggcggaggctaaccgcataagagagaagtactctgacagaattcctgt 119
             |||||||||||||| ||||||||||| || ||||| ||||||  |||||||||||||||
Sbjct: 84893 gagaggaggcaggctgaggctaaccgtatcagagaaaagtacagtgacagaattcctgt 84835



 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                  
Query: 25    atggccaagagctcgttcaagctggagcacccgctcg 61
             |||||||||||||||||||||||||| ||| ||||||
Sbjct: 85996 atggccaagagctcgttcaagctggaccacacgctcg 85960
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>emb|AJ417518.1|OSA417518 Oryza sativa partial mRNA for putative microtubule-associated
           protein (xd2 gene)
          Length = 613

 Score = 69.9 bits (35), Expect = 3e-09
 Identities = 41/43 (95%)
 Strand = Plus / Plus

                                                      
Query: 94  gagaagtactctgacagaattcctgtgatcgttgagaaggctg 136
           ||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 59  gagaagtactcagacagaattccggtgatcgttgagaaggctg 101
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 69.9 bits (35), Expect = 3e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                           
Query: 61       gagaggaggcaggcggaggctaaccgcataagagagaagtactctgacagaattcctgt 119
                |||||||||||||| ||||||||||| || ||||| ||||||  |||||||||||||||
Sbjct: 31751623 gagaggaggcaggctgaggctaaccgtatcagagaaaagtacagtgacagaattcctgt 31751565



 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                     
Query: 25       atggccaagagctcgttcaagctggagcacccgctcg 61
                |||||||||||||||||||||||||| ||| ||||||
Sbjct: 31752726 atggccaagagctcgttcaagctggaccacacgctcg 31752690
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>dbj|AK059939.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-E03, full
           insert sequence
          Length = 953

 Score = 69.9 bits (35), Expect = 3e-09
 Identities = 41/43 (95%)
 Strand = Plus / Plus

                                                      
Query: 94  gagaagtactctgacagaattcctgtgatcgttgagaaggctg 136
           ||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 198 gagaagtactcagacagaattccggtgatcgttgagaaggctg 240
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>gb|DQ269983.1| Oryza sativa (indica cultivar-group) autophagy 8 (APG8) mRNA,
           complete cds
          Length = 360

 Score = 69.9 bits (35), Expect = 3e-09
 Identities = 41/43 (95%)
 Strand = Plus / Plus

                                                      
Query: 94  gagaagtactctgacagaattcctgtgatcgttgagaaggctg 136
           ||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 70  gagaagtactcagacagaattccggtgatcgttgagaaggctg 112
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>gb|AF542187.1| Triticum aestivum autophagy mRNA, complete cds
          Length = 574

 Score = 61.9 bits (31), Expect = 7e-07
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                      
Query: 94  gagaagtactctgacagaattcctgtgatcgttgagaaggctg 136
           ||||||||  ||||||||||||| |||||||||||||||||||
Sbjct: 137 gagaagtatgctgacagaattccggtgatcgttgagaaggctg 179
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>ref|NM_179064.2| Arabidopsis thaliana microtubule binding AT4G16520 transcript
           variant AT4G16520.2 mRNA, complete cds
          Length = 892

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                    
Query: 91  agagagaagtactctgacagaattcctgtgatcgttgagaaggctgggaagagtgat 147
           |||||||||||  |||| || ||||| ||||| ||||||||||||| ||||||||||
Sbjct: 396 agagagaagtatcctgataggattccggtgattgttgagaaggctgagaagagtgat 452
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>ref|NM_117751.2| Arabidopsis thaliana microtubule binding AT4G16520 transcript
           variant AT4G16520.1 mRNA, complete cds
          Length = 688

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                    
Query: 91  agagagaagtactctgacagaattcctgtgatcgttgagaaggctgggaagagtgat 147
           |||||||||||  |||| || ||||| ||||| ||||||||||||| ||||||||||
Sbjct: 192 agagagaagtatcctgataggattccggtgattgttgagaaggctgagaagagtgat 248
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>gb|AY091667.1| Arabidopsis thaliana AT4g16520/dl4285c mRNA, complete cds
          Length = 366

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                    
Query: 91  agagagaagtactctgacagaattcctgtgatcgttgagaaggctgggaagagtgat 147
           |||||||||||  |||| || ||||| ||||| ||||||||||||| ||||||||||
Sbjct: 67  agagagaagtatcctgataggattccggtgattgttgagaaggctgagaagagtgat 123
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>gb|AY070464.1| Arabidopsis thaliana AT4g16520/dl4285c mRNA, complete cds
          Length = 608

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                    
Query: 91  agagagaagtactctgacagaattcctgtgatcgttgagaaggctgggaagagtgat 147
           |||||||||||  |||| || ||||| ||||| ||||||||||||| ||||||||||
Sbjct: 163 agagagaagtatcctgataggattccggtgattgttgagaaggctgagaagagtgat 219
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>emb|BX826371.1|CNS0A2HK Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB1ZF06 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 506

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                    
Query: 91  agagagaagtactctgacagaattcctgtgatcgttgagaaggctgggaagagtgat 147
           |||||||||||  |||| || ||||| ||||| ||||||||||||| ||||||||||
Sbjct: 31  agagagaagtatcctgataggattccggtgattgttgagaaggctgagaagagtgat 87
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>gb|AY085763.1| Arabidopsis thaliana clone 17851 mRNA, complete sequence
          Length = 666

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                    
Query: 91  agagagaagtactctgacagaattcctgtgatcgttgagaaggctgggaagagtgat 147
           |||||||||||  |||| || ||||| ||||| ||||||||||||| ||||||||||
Sbjct: 192 agagagaagtatcctgataggattccggtgattgttgagaaggctgagaagagtgat 248
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>dbj|AB073180.1| Arabidopsis thaliana AtAPG8f mRNA for autophagy 8f, complete cds
          Length = 447

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                    
Query: 91  agagagaagtactctgacagaattcctgtgatcgttgagaaggctgggaagagtgat 147
           |||||||||||  |||| || ||||| ||||| ||||||||||||| ||||||||||
Sbjct: 148 agagagaagtatcctgataggattccggtgattgttgagaaggctgagaagagtgat 204
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>gb|DQ078759.1| Saccharum officinarum microtubule associated protein 1A/1B light
           chain 3 mRNA, partial cds
          Length = 303

 Score = 56.0 bits (28), Expect = 4e-05
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                   
Query: 79  gctaaccgcataagagagaagtactctgacagaattcctgtgatcgttgagaaggc 134
           ||||||||||| || ||||||||| |||| ||||| ||||| || |||||||||||
Sbjct: 1   gctaaccgcatcagggagaagtaccctgatagaatccctgtcattgttgagaaggc 56
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 52.0 bits (26), Expect = 7e-04
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                     
Query: 24      gatggccaagagctcgttcaagctggagcacccgctcg 61
               |||||| | |||||||||||||||||||||||| ||||
Sbjct: 5358356 gatggcgaggagctcgttcaagctggagcacccactcg 5358393



 Score = 48.1 bits (24), Expect = 0.011
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                       
Query: 64      aggaggcaggcggaggctaaccgcataagagagaagtactctgacagaattcctgt 119
               ||||||||||| ||||| |||||||| || ||||||||  | || |||||||||||
Sbjct: 5358897 aggaggcaggctgaggccaaccgcatcagggagaagtatcccgatagaattcctgt 5358952
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>dbj|AP005441.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0056O06
          Length = 151038

 Score = 52.0 bits (26), Expect = 7e-04
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                   
Query: 24    gatggccaagagctcgttcaagctggagcacccgctcg 61
             |||||| | |||||||||||||||||||||||| ||||
Sbjct: 28167 gatggcgaggagctcgttcaagctggagcacccactcg 28204



 Score = 48.1 bits (24), Expect = 0.011
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                     
Query: 64    aggaggcaggcggaggctaaccgcataagagagaagtactctgacagaattcctgt 119
             ||||||||||| ||||| |||||||| || ||||||||  | || |||||||||||
Sbjct: 28708 aggaggcaggctgaggccaaccgcatcagggagaagtatcccgatagaattcctgt 28763
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>gb|AY104735.1| Zea mays PCO136400 mRNA sequence
          Length = 740

 Score = 48.1 bits (24), Expect = 0.011
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 106 gacagaattcctgtgatcgttgagaaggctgg 137
           ||||||||||||||||| |||||||| |||||
Sbjct: 259 gacagaattcctgtgattgttgagaaagctgg 290
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>gb|AC138087.17| Medicago truncatula clone mth2-22p8, complete sequence
          Length = 130194

 Score = 46.1 bits (23), Expect = 0.043
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                
Query: 175    ccttgtnccagctgatcttacagttggacagttt 208
              |||||| || |||||||| |||||||||||||||
Sbjct: 116957 ccttgtccctgctgatctcacagttggacagttt 116990
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>emb|AJ489614.1|CAR489614 Cicer arietinum mRNA for microtubule associated protein (map gene)
          Length = 592

 Score = 46.1 bits (23), Expect = 0.043
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 175 ccttgtnccagctgatcttacagttggacagttt 208
           |||||| || |||||||| |||||||||||||||
Sbjct: 220 ccttgtccctgctgatctcacagttggacagttt 253
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>ref|XM_567139.1| Cryptococcus neoformans var. neoformans JEC21 microtubule binding
           protein (CNA07930) partial mRNA
          Length = 767

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                     
Query: 106 gacagaattcctgtgatcgttgagaaggctgggaagagtgat 147
           ||||| ||||| ||||||  ||||||||||| ||||||||||
Sbjct: 203 gacaggattcccgtgatctgtgagaaggctgagaagagtgat 244
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>emb|Z97341.2|ATFCA6 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 6
          Length = 213788

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 118   gtgatcgttgagaaggctgggaagagtgat 147
             ||||| ||||||||||||| ||||||||||
Sbjct: 71898 gtgattgttgagaaggctgagaagagtgat 71869
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>emb|AL161556.2|ATCHRIV56 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 56
          Length = 196247

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 91    agagagaagtactctgacagaattcc 116
             |||||||||||| |||||||||||||
Sbjct: 84215 agagagaagtaccctgacagaattcc 84240
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>emb|AL161544.2|ATCHRIV44 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 44
          Length = 198735

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 118   gtgatcgttgagaaggctgggaagagtgat 147
             ||||| ||||||||||||| ||||||||||
Sbjct: 49826 gtgattgttgagaaggctgagaagagtgat 49797
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>emb|AL022140.1|ATF1N20 Arabidopsis thaliana DNA chromosome 4, BAC clone F1N20 (ESSA project)
          Length = 103270

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 91    agagagaagtactctgacagaattcc 116
             |||||||||||| |||||||||||||
Sbjct: 29896 agagagaagtaccctgacagaattcc 29921
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>emb|AL021890.1|ATT8O5 Arabidopsis thaliana DNA chromosome 4, BAC clone T8O5 (ESSAII project)
          Length = 83029

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 91    agagagaagtactctgacagaattcc 116
             |||||||||||| |||||||||||||
Sbjct: 82726 agagagaagtaccctgacagaattcc 82751
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>emb|BX824754.1|CNS0A5JQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH6ZG01 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 569

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                     
Query: 91  agagagaagtactctgacagaattcctgtgatcgttgagaag 132
           ||||||||||| ||||||||||| || ||||| || ||||||
Sbjct: 133 agagagaagtattctgacagaatcccggtgattgtggagaag 174
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>emb|AL672238.1| Human DNA sequence from clone RP11-293G6 on chromosome 1 Contains a
             NADH dehydrogenase 6 (MTND6) processed pseudogene, a NADH
             dehydrogenase 5 (MTND5) processed pseudogene, a NADH
             dehydrogenase 4 (MTND4) processed pseudogene, a NADH
             dehydrogenase 4L (MTND4L) processed pseudogene, a NADH
             dehydrogenase 3 (MTND3) processed pseudogene, a cytochrome
             c oxidase III (MTCO3) processed pseudogene and the 3' end
             of the GNG4 gene for guanine nucleotide binding protein (G
             protein), gamma 4, complete sequence
          Length = 39673

 Score = 42.1 bits (21), Expect = 0.67
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 62    agaggaggcaggcggaggcta 82
             |||||||||||||||||||||
Sbjct: 13008 agaggaggcaggcggaggcta 13028
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>ref|XM_525579.1| PREDICTED: Pan troglodytes heme oxygenase (decyclizing) 1
           (LOC470195), mRNA
          Length = 1464

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 56  cgctcgagaggaggcaggcg 75
           ||||||||||||||||||||
Sbjct: 408 cgctcgagaggaggcaggcg 389
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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 36      ctcgttcaagctggagcacc 55
               ||||||||||||||||||||
Sbjct: 1852430 ctcgttcaagctggagcacc 1852411
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>gb|AY460337.1| Homo sapiens heme oxygenase (decycling) 1 (HMOX1) gene, complete cds
          Length = 18677

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 56   cgctcgagaggaggcaggcg 75
            ||||||||||||||||||||
Sbjct: 3228 cgctcgagaggaggcaggcg 3209
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>emb|Z82244.1|HS286B10 Human DNA sequence from clone CTA-286B10 on chromosome 22, complete
             sequence
          Length = 87869

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    cgctcgagaggaggcaggcg 75
             ||||||||||||||||||||
Sbjct: 38540 cgctcgagaggaggcaggcg 38521
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>emb|CR860175.1| Pongo pygmaeus mRNA; cDNA DKFZp469G141 (from clone DKFZp469G141)
          Length = 1576

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 56 cgctcgagaggaggcaggcg 75
          ||||||||||||||||||||
Sbjct: 27 cgctcgagaggaggcaggcg 8
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>emb|CR623301.1| full-length cDNA clone CS0DI029YM22 of Placenta Cot 25-normalized
          of Homo sapiens (human)
          Length = 1558

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 56 cgctcgagaggaggcaggcg 75
          ||||||||||||||||||||
Sbjct: 54 cgctcgagaggaggcaggcg 35
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>emb|CR603909.1| full-length cDNA clone CS0DI041YF16 of Placenta Cot 25-normalized
          of Homo sapiens (human)
          Length = 1540

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 56 cgctcgagaggaggcaggcg 75
          ||||||||||||||||||||
Sbjct: 36 cgctcgagaggaggcaggcg 17
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>gb|AE011792.1| Xanthomonas axonopodis pv. citri str. 306,  section 170 of 469 of the
            complete genome
          Length = 10523

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 36   ctcgttcaagctggagcacc 55
            ||||||||||||||||||||
Sbjct: 3979 ctcgttcaagctggagcacc 3960
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>gb|AC023162.41| Homo sapiens 3 BAC RP11-263I1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 95579

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    gagaggaggcaggcggaggc 80
             ||||||||||||||||||||
Sbjct: 39414 gagaggaggcaggcggaggc 39433
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>emb|CR456505.1| Homo sapiens HMOX1 full length open reading frame (ORF) cDNA
          clone (cDNA clone C22ORF:pGEM.HMOX1.V2)
          Length = 1071

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 56 cgctcgagaggaggcaggcg 75
          ||||||||||||||||||||
Sbjct: 59 cgctcgagaggaggcaggcg 40
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>emb|AL449213.4|HS344J2 Homo sapiens chromosome 3 sequence from BAC 344J2 map 3q21 region
             D3S3607-D3S1587, complete sequence
          Length = 98356

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    gagaggaggcaggcggaggc 80
             ||||||||||||||||||||
Sbjct: 65437 gagaggaggcaggcggaggc 65418
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>emb|X14782.2|HSHO5G Human HO-1 gene for heme oxygenase-1, exon 1
          Length = 659

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 56  cgctcgagaggaggcaggcg 75
           ||||||||||||||||||||
Sbjct: 567 cgctcgagaggaggcaggcg 548


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,384,393
Number of Sequences: 3902068
Number of extensions: 1384393
Number of successful extensions: 82583
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 82383
Number of HSP's gapped (non-prelim): 184
length of query: 208
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 186
effective length of database: 17,147,199,772
effective search space: 3189379157592
effective search space used: 3189379157592
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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