| Clone Name | basd20f02 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | MT1_WHEAT (P43400) Metallothionein-like protein 1 (MT-1) | 88 | 8e-18 | 2 | MT1_FESRU (O24528) Metallothionein-like protein 1 (MT-1) | 56 | 4e-08 | 3 | MT1_ORYSA (Q40633) Metallothionein-like protein 1 | 48 | 9e-06 | 4 | MT1_MAIZE (P30571) Metallothionein-like protein 1 (MT-1) | 38 | 0.012 | 5 | MT1_HORVU (P26571) Metallothionein-like protein 1 (MT-1) | 38 | 0.012 | 6 | MT25_BRAJU (P56172) Metallothionein-like protein type 2, MT2-28 | 28 | 9.4 | 7 | MT23_BRAJU (P56170) Metallothionein-like protein type 2, MT2-22 | 28 | 9.4 |
|---|
>MT1_WHEAT (P43400) Metallothionein-like protein 1 (MT-1)| Length = 75 Score = 88.2 bits (217), Expect = 8e-18 Identities = 43/45 (95%), Positives = 44/45 (97%) Frame = +1 Query: 88 KMYPDLTEQGSATAQVAAVVVLGMAPENKAGQFEVAAGQSGEGCS 222 KMYPDLTEQGSA AQVAAVVVLG+APENKAGQFEVAAGQSGEGCS Sbjct: 19 KMYPDLTEQGSAAAQVAAVVVLGVAPENKAGQFEVAAGQSGEGCS 63
>MT1_FESRU (O24528) Metallothionein-like protein 1 (MT-1)| Length = 70 Score = 55.8 bits (133), Expect = 4e-08 Identities = 31/44 (70%), Positives = 34/44 (77%) Frame = +1 Query: 88 KMYPDLTEQGSATAQVAAVVVLGMAPENKAGQFEVAAGQSGEGC 219 KMYPDL EQ S T Q AVVV+G+A ENKAGQFE+A SGEGC Sbjct: 19 KMYPDLDEQASTTTQ--AVVVVGVAHENKAGQFEMA---SGEGC 57
>MT1_ORYSA (Q40633) Metallothionein-like protein 1| Length = 74 Score = 48.1 bits (113), Expect = 9e-06 Identities = 27/47 (57%), Positives = 32/47 (68%), Gaps = 2/47 (4%) Frame = +1 Query: 88 KMYPDLTEQGSATAQVAAVVVLGMAPENKAGQFEVAA--GQSGEGCS 222 K YPDL E+ S+T A VVLG+APE KA QFE AA G++ GCS Sbjct: 19 KKYPDLEEKSSSTK---ATVVLGVAPEKKAQQFEAAAESGETAHGCS 62
>MT1_MAIZE (P30571) Metallothionein-like protein 1 (MT-1)| Length = 76 Score = 37.7 bits (86), Expect = 0.012 Identities = 25/49 (51%), Positives = 29/49 (59%), Gaps = 4/49 (8%) Frame = +1 Query: 88 KMYPDLTEQGSATAQVAAVVVLGMAPENKAG-QFEVAAGQSGE---GCS 222 K YPDL E +A VVLG+APE KA +F AA +SGE GCS Sbjct: 19 KKYPDLEETSTAAQPT---VVLGVAPEKKAAPEFVEAAAESGEAAHGCS 64
>MT1_HORVU (P26571) Metallothionein-like protein 1 (MT-1)| Length = 74 Score = 37.7 bits (86), Expect = 0.012 Identities = 24/47 (51%), Positives = 30/47 (63%), Gaps = 2/47 (4%) Frame = +1 Query: 88 KMYPDLTEQGSATAQVAAVVVLGMAPENKAGQFEVAA--GQSGEGCS 222 KMYPDL E+ AT QV V+VLG+ + QFE AA G++ GCS Sbjct: 19 KMYPDLEEKSGATMQV-TVIVLGVG--SAKVQFEEAAEFGEAAHGCS 62
>MT25_BRAJU (P56172) Metallothionein-like protein type 2, MT2-28| Length = 80 Score = 28.1 bits (61), Expect = 9.4 Identities = 18/40 (45%), Positives = 25/40 (62%) Frame = +1 Query: 88 KMYPDLTEQGSATAQVAAVVVLGMAPENKAGQFEVAAGQS 207 KMYPDL+ G T +VLG+AP + QFE A+G++ Sbjct: 23 KMYPDLSFSGETT--TTETLVLGLAPAMNS-QFE-ASGET 58
>MT23_BRAJU (P56170) Metallothionein-like protein type 2, MT2-22| Length = 80 Score = 28.1 bits (61), Expect = 9.4 Identities = 18/40 (45%), Positives = 26/40 (65%) Frame = +1 Query: 88 KMYPDLTEQGSATAQVAAVVVLGMAPENKAGQFEVAAGQS 207 KMYPDL+ G T A +VLG+AP + Q+E A+G++ Sbjct: 23 KMYPDLSFSGETTTSEA--LVLGVAPSMNS-QYE-ASGET 58 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 33,260,692 Number of Sequences: 219361 Number of extensions: 343930 Number of successful extensions: 784 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 774 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 782 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2453576370 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)