ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd20f01 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X83095.1|ASRBCSSS A.squarrosa mRNA for ribulose-1,5-bisphosphate carboxylase/oxygenase, small subunit Length = 837 Score = 206 bits (104), Expect = 1e-50 Identities = 110/112 (98%) Strand = Plus / Plus Query: 1 cccccaccgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtcca 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 51 cccccaccgtgatggcctcgtcggccacctccgtcgctcctttccaggggctcaagtcca 110 Query: 61 ccgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgt 112 |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 111 ccgccggcctccccgtcagccgccgctccaacggcgctagcctcggcagcgt 162
>emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9 Length = 875 Score = 198 bits (100), Expect = 2e-48 Identities = 109/112 (97%) Strand = Plus / Plus Query: 1 cccccaccgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtcca 60 |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 91 cccctaccgtgatggcctcgtcggccacctccgtcgctcctttccaggggctcaagtcca 150 Query: 61 ccgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgt 112 |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 151 ccgccggcctccccgtcagccgccgctccaacggcgctagcctcggcagcgt 202
>dbj|AB042066.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p9-1 Length = 739 Score = 198 bits (100), Expect = 2e-48 Identities = 109/112 (97%) Strand = Plus / Plus Query: 1 cccccaccgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtcca 60 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 5 cccccgccgtgatggcctcgtcggccacctccgtcgctcctttccaggggctcaagtcca 64 Query: 61 ccgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgt 112 |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 65 ccgccggcctccccgtcagccgccgctccaacggcgctagcctcggcagcgt 116
>dbj|AB042064.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p2-1 Length = 653 Score = 198 bits (100), Expect = 2e-48 Identities = 109/112 (97%) Strand = Plus / Plus Query: 1 cccccaccgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtcca 60 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 5 cccccgccgtgatggcctcgtcggccacctccgtcgctcctttccaggggctcaagtcca 64 Query: 61 ccgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgt 112 |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 65 ccgccggcctccccgtcagccgccgctccaacggcgctagcctcggcagcgt 116
>gb|U43493.1|HVU43493 Hordeum vulgare ribulose-1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 816 Score = 176 bits (89), Expect = 9e-42 Identities = 92/93 (98%) Strand = Plus / Plus Query: 1 cccccaccgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtcca 60 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 28 cccccaccgtgatggcctcatcggcaacctccgtcgctcctttccaggggctcaagtcca 87 Query: 61 ccgccggccttcccgtcagccgccgctccaacg 93 ||||||||||||||||||||||||||||||||| Sbjct: 88 ccgccggccttcccgtcagccgccgctccaacg 120
>emb|X00235.1|TARUB2 Wheat mRNA fragment for small subunit precursor of RuBPCase (EC 4.1.1.39 ribulosebisphosphate carboxylase) clones 234 and 406 Length = 743 Score = 153 bits (77), Expect = 1e-34 Identities = 80/81 (98%) Strand = Plus / Plus Query: 32 cgtcgctcctttccaggggctcaagtccaccgccggccttcccgtcagccgccgctccaa 91 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1 cgtcgctcctttccaggggctcaagtccaccgccggcctccccgtcagccgccgctccaa 60 Query: 92 cggcgctagcctcggcagcgt 112 ||||||||||||||||||||| Sbjct: 61 cggcgctagcctcggcagcgt 81
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 147 bits (74), Expect = 8e-33 Identities = 101/110 (91%) Strand = Plus / Plus Query: 3 cccaccgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccacc 62 ||||||||||||||||| |||||||||||||| ||||| |||||||||||||| |||||| Sbjct: 11276336 cccaccgtgatggcctcgtcggccacctccgttgctcccttccaggggctcaaatccacc 11276395 Query: 63 gccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgt 112 ||||| || ||||||||||||||||||||| |||| ||||||||||||| Sbjct: 11276396 gccgggctccccgtcagccgccgctccaacagcgccggcctcggcagcgt 11276445 Score = 131 bits (66), Expect = 5e-28 Identities = 84/90 (93%) Strand = Plus / Plus Query: 1 cccccaccgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtcca 60 ||||||||||||||||||| |||||||||||||| ||||| ||||| ||||||||||||| Sbjct: 11261677 cccccaccgtgatggcctcctcggccacctccgtggctccattccaagggctcaagtcca 11261736 Query: 61 ccgccggccttcccgtcagccgccgctcca 90 ||||||| || ||||||||||||||||||| Sbjct: 11261737 ccgccgggctccccgtcagccgccgctcca 11261766 Score = 105 bits (53), Expect = 3e-20 Identities = 80/89 (89%) Strand = Plus / Minus Query: 1 cccccaccgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtcca 60 ||||| |||||||||| || ||||||||| |||||||||| ||||||||||||||||||| Sbjct: 10080396 ccccctccgtgatggcgtcgtcggccaccaccgtcgctcccttccaggggctcaagtcca 10080337 Query: 61 ccgccggccttcccgtcagccgccgctcc 89 |||||||| | |||||| |||||||||| Sbjct: 10080336 ccgccggcatgcccgtcgcccgccgctcc 10080308 Score = 95.6 bits (48), Expect = 3e-17 Identities = 63/68 (92%) Strand = Plus / Plus Query: 23 ggccacctccgtcgctcctttccaggggctcaagtccaccgccggccttcccgtcagccg 82 |||||||||||| ||||| ||||||||||||||||||||||||||||| || || ||||| Sbjct: 11264737 ggccacctccgtggctccattccaggggctcaagtccaccgccggcctcccagtgagccg 11264796 Query: 83 ccgctcca 90 |||||||| Sbjct: 11264797 ccgctcca 11264804 Score = 83.8 bits (42), Expect = 1e-13 Identities = 72/82 (87%) Strand = Plus / Plus Query: 9 gtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggc 68 |||||||| || |||||||||||||| ||||| |||||||||||||||||||| || ||| Sbjct: 11319503 gtgatggcttcgtcggccacctccgtggctcccttccaggggctcaagtccactgcgggc 11319562 Query: 69 cttcccgtcagccgccgctcca 90 || || || | ||||||||||| Sbjct: 11319563 ctcccggtgaaccgccgctcca 11319584
>dbj|AK099574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013036G21, full insert sequence Length = 947 Score = 147 bits (74), Expect = 8e-33 Identities = 101/110 (91%) Strand = Plus / Plus Query: 3 cccaccgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccacc 62 ||||||||||||||||| |||||||||||||| ||||| |||||||||||||| |||||| Sbjct: 75 cccaccgtgatggcctcgtcggccacctccgttgctcccttccaggggctcaaatccacc 134 Query: 63 gccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgt 112 ||||| || ||||||||||||||||||||| |||| ||||||||||||| Sbjct: 135 gccgggctccccgtcagccgccgctccaacagcgccggcctcggcagcgt 184
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 147 bits (74), Expect = 8e-33 Identities = 101/110 (91%) Strand = Plus / Plus Query: 3 cccaccgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccacc 62 ||||||||||||||||| |||||||||||||| ||||| |||||||||||||| |||||| Sbjct: 11276007 cccaccgtgatggcctcgtcggccacctccgttgctcccttccaggggctcaaatccacc 11276066 Query: 63 gccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgt 112 ||||| || ||||||||||||||||||||| |||| ||||||||||||| Sbjct: 11276067 gccgggctccccgtcagccgccgctccaacagcgccggcctcggcagcgt 11276116 Score = 131 bits (66), Expect = 5e-28 Identities = 84/90 (93%) Strand = Plus / Plus Query: 1 cccccaccgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtcca 60 ||||||||||||||||||| |||||||||||||| ||||| ||||| ||||||||||||| Sbjct: 11261348 cccccaccgtgatggcctcctcggccacctccgtggctccattccaagggctcaagtcca 11261407 Query: 61 ccgccggccttcccgtcagccgccgctcca 90 ||||||| || ||||||||||||||||||| Sbjct: 11261408 ccgccgggctccccgtcagccgccgctcca 11261437 Score = 105 bits (53), Expect = 3e-20 Identities = 80/89 (89%) Strand = Plus / Minus Query: 1 cccccaccgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtcca 60 ||||| |||||||||| || ||||||||| |||||||||| ||||||||||||||||||| Sbjct: 10080281 ccccctccgtgatggcgtcgtcggccaccaccgtcgctcccttccaggggctcaagtcca 10080222 Query: 61 ccgccggccttcccgtcagccgccgctcc 89 |||||||| | |||||| |||||||||| Sbjct: 10080221 ccgccggcatgcccgtcgcccgccgctcc 10080193 Score = 95.6 bits (48), Expect = 3e-17 Identities = 63/68 (92%) Strand = Plus / Plus Query: 23 ggccacctccgtcgctcctttccaggggctcaagtccaccgccggccttcccgtcagccg 82 |||||||||||| ||||| ||||||||||||||||||||||||||||| || || ||||| Sbjct: 11264408 ggccacctccgtggctccattccaggggctcaagtccaccgccggcctcccagtgagccg 11264467 Query: 83 ccgctcca 90 |||||||| Sbjct: 11264468 ccgctcca 11264475 Score = 83.8 bits (42), Expect = 1e-13 Identities = 72/82 (87%) Strand = Plus / Plus Query: 9 gtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggc 68 |||||||| || |||||||||||||| ||||| |||||||||||||||||||| || ||| Sbjct: 11319174 gtgatggcttcgtcggccacctccgtggctcccttccaggggctcaagtccactgcgggc 11319233 Query: 69 cttcccgtcagccgccgctcca 90 || || || | ||||||||||| Sbjct: 11319234 ctcccggtgaaccgccgctcca 11319255
>emb|BX119951.3|CNS09S4U Oryza sativa chromosome 12, . BAC OJ1523_A01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127267 Score = 147 bits (74), Expect = 8e-33 Identities = 101/110 (91%) Strand = Plus / Minus Query: 3 cccaccgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccacc 62 ||||||||||||||||| |||||||||||||| ||||| |||||||||||||| |||||| Sbjct: 95718 cccaccgtgatggcctcgtcggccacctccgttgctcccttccaggggctcaaatccacc 95659 Query: 63 gccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgt 112 ||||| || ||||||||||||||||||||| |||| ||||||||||||| Sbjct: 95658 gccgggctccccgtcagccgccgctccaacagcgccggcctcggcagcgt 95609 Score = 131 bits (66), Expect = 5e-28 Identities = 84/90 (93%) Strand = Plus / Minus Query: 1 cccccaccgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtcca 60 ||||||||||||||||||| |||||||||||||| ||||| ||||| ||||||||||||| Sbjct: 110377 cccccaccgtgatggcctcctcggccacctccgtggctccattccaagggctcaagtcca 110318 Query: 61 ccgccggccttcccgtcagccgccgctcca 90 ||||||| || ||||||||||||||||||| Sbjct: 110317 ccgccgggctccccgtcagccgccgctcca 110288 Score = 95.6 bits (48), Expect = 3e-17 Identities = 63/68 (92%) Strand = Plus / Minus Query: 23 ggccacctccgtcgctcctttccaggggctcaagtccaccgccggccttcccgtcagccg 82 |||||||||||| ||||| ||||||||||||||||||||||||||||| || || ||||| Sbjct: 107317 ggccacctccgtggctccattccaggggctcaagtccaccgccggcctcccagtgagccg 107258 Query: 83 ccgctcca 90 |||||||| Sbjct: 107257 ccgctcca 107250 Score = 83.8 bits (42), Expect = 1e-13 Identities = 72/82 (87%) Strand = Plus / Minus Query: 9 gtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggc 68 |||||||| || |||||||||||||| ||||| |||||||||||||||||||| || ||| Sbjct: 52551 gtgatggcttcgtcggccacctccgtggctcccttccaggggctcaagtccactgcgggc 52492 Query: 69 cttcccgtcagccgccgctcca 90 || || || | ||||||||||| Sbjct: 52491 ctcccggtgaaccgccgctcca 52470
>gb|AY445627.1| Oryza sativa (japonica cultivar-group) ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit mRNA, complete cds; chloroplast Length = 860 Score = 131 bits (66), Expect = 5e-28 Identities = 84/90 (93%) Strand = Plus / Plus Query: 1 cccccaccgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtcca 60 ||||||||||||||||||| |||||||||||||| ||||| ||||| ||||||||||||| Sbjct: 56 cccccaccgtgatggcctcctcggccacctccgtggctccattccaagggctcaagtcca 115 Query: 61 ccgccggccttcccgtcagccgccgctcca 90 ||||||| || ||||||||||||||||||| Sbjct: 116 ccgccgggctccccgtcagccgccgctcca 145
>dbj|AK068555.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156H12, full insert sequence Length = 899 Score = 131 bits (66), Expect = 5e-28 Identities = 84/90 (93%) Strand = Plus / Plus Query: 1 cccccaccgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtcca 60 ||||||||||||||||||| |||||||||||||| ||||| ||||| ||||||||||||| Sbjct: 73 cccccaccgtgatggcctcctcggccacctccgtggctccattccaagggctcaagtcca 132 Query: 61 ccgccggccttcccgtcagccgccgctcca 90 ||||||| || ||||||||||||||||||| Sbjct: 133 ccgccgggctccccgtcagccgccgctcca 162
>dbj|D00644.1|RICRUBPC2 Oryza sativa (japonica cultivar-group) mRNA for the small subunit of ribulose-1,5-bisphosphate carboxylase, complete cds, clone pOSSS2106 Length = 895 Score = 131 bits (66), Expect = 5e-28 Identities = 84/90 (93%) Strand = Plus / Plus Query: 1 cccccaccgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtcca 60 ||||||||||||||||||| |||||||||||||| ||||| ||||| ||||||||||||| Sbjct: 71 cccccaccgtgatggcctcctcggccacctccgtggctccattccaagggctcaagtcca 130 Query: 61 ccgccggccttcccgtcagccgccgctcca 90 ||||||| || ||||||||||||||||||| Sbjct: 131 ccgccgggctccccgtcagccgccgctcca 160
>gb|AF017363.1|AF017363 Oryza sativa ribulose 1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 918 Score = 129 bits (65), Expect = 2e-27 Identities = 83/89 (93%) Strand = Plus / Plus Query: 2 ccccaccgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccac 61 |||||||||||||||||| |||||||||||||| ||||| ||||| |||||||||||||| Sbjct: 58 ccccaccgtgatggcctcctcggccacctccgtggctccattccaagggctcaagtccac 117 Query: 62 cgccggccttcccgtcagccgccgctcca 90 |||||| || ||||||||||||||||||| Sbjct: 118 cgccgggctccccgtcagccgccgctcca 146
>gb|L22155.1|RICCPRBCLA Oryza sativum mitochondrial ribulose bisphosphate carboxylase/oxygenase (rbcS) mRNA, complete cds Length = 808 Score = 111 bits (56), Expect = 4e-22 Identities = 83/92 (90%) Strand = Plus / Plus Query: 1 cccccaccgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtcca 60 ||||| |||||||||| || ||||||||| |||||||||| ||||||||||||||||||| Sbjct: 42 ccccctccgtgatggcgtcgtcggccaccaccgtcgctcccttccaggggctcaagtcca 101 Query: 61 ccgccggccttcccgtcagccgccgctccaac 92 |||||||| | |||||| ||||||||||||| Sbjct: 102 ccgccggcatgcccgtcgcccgccgctccaac 133
>dbj|AB042068.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p13-1 Length = 985 Score = 111 bits (56), Expect = 4e-22 Identities = 92/104 (88%) Strand = Plus / Plus Query: 9 gtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggc 68 |||||||| || ||||||||||||||||| || |||||||| |||||||| ||||||||| Sbjct: 13 gtgatggcttcctcggccacctccgtcgcacccttccagggtctcaagtcgaccgccggc 72 Query: 69 cttcccgtcagccgccgctccaacggcgctagcctcggcagcgt 112 || ||||||||||||||||||| | |||| ||||| ||||||| Sbjct: 73 ctgcccgtcagccgccgctccagcagcgccggcctcagcagcgt 116
>dbj|AB020955.1| Triticum timopheevii subsp. armeniacum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ara-B Length = 787 Score = 109 bits (55), Expect = 2e-21 Identities = 93/105 (88%), Gaps = 3/105 (2%) Strand = Plus / Plus Query: 8 cgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccgg 67 ||||||||| || ||||| ||| ||||||| || |||||||||||||||||||| ||||| Sbjct: 1 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 60 Query: 68 ccttcccgtcagccgccgctccaacggcgctagcctcggcagcgt 112 ||| ||||||||||||||||||| |||| |||||||||||||| Sbjct: 61 cctgcccgtcagccgccgctccagcggc---agcctcggcagcgt 102
>dbj|AB020954.1| Triticum urartu DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ura-B Length = 787 Score = 109 bits (55), Expect = 2e-21 Identities = 93/105 (88%), Gaps = 3/105 (2%) Strand = Plus / Plus Query: 8 cgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccgg 67 ||||||||| || ||||| ||| ||||||| || |||||||||||||||||||| ||||| Sbjct: 1 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 60 Query: 68 ccttcccgtcagccgccgctccaacggcgctagcctcggcagcgt 112 ||| ||||||||||||||||||| |||| |||||||||||||| Sbjct: 61 cctgcccgtcagccgccgctccagcggc---agcctcggcagcgt 102
>dbj|AB020953.1| Aegilops squarrosa DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Squ-B Length = 781 Score = 109 bits (55), Expect = 2e-21 Identities = 93/105 (88%), Gaps = 3/105 (2%) Strand = Plus / Plus Query: 8 cgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccgg 67 ||||||||| || ||||| ||| ||||||| || |||||||||||||||||||||||||| Sbjct: 1 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccaccgccgg 60 Query: 68 ccttcccgtcagccgccgctccaacggcgctagcctcggcagcgt 112 || ||||||||||||||||||| |||| |||||||||||||| Sbjct: 61 tctccccgtcagccgccgctccagcggc---agcctcggcagcgt 102
>dbj|AB020960.1| Bromus catharticus DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Bro-B Length = 784 Score = 109 bits (55), Expect = 2e-21 Identities = 73/79 (92%) Strand = Plus / Plus Query: 12 atggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctt 71 ||||| || ||||||||||||||||| || |||||||| |||||||||||||||||||| Sbjct: 5 atggcttcgtcggccacctccgtcgcgcccttccagggtctcaagtccaccgccggcctg 64 Query: 72 cccgtcagccgccgctcca 90 ||||||||||||||||||| Sbjct: 65 cccgtcagccgccgctcca 83
>gb|AF202646.1|AF202646 Avena clauda clone ClG4 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 586 Score = 107 bits (54), Expect = 7e-21 Identities = 72/78 (92%) Strand = Plus / Plus Query: 9 gtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggc 68 |||||||| || ||||||||||||||||| || |||||||| |||||||||||||| ||| Sbjct: 1 gtgatggcttcttcggccacctccgtcgcgcccttccagggcctcaagtccaccgctggc 60 Query: 69 cttcccgtcagccgccgc 86 |||||||||||||||||| Sbjct: 61 cttcccgtcagccgccgc 78
>dbj|AK121444.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141B14, full insert sequence Length = 984 Score = 105 bits (53), Expect = 3e-20 Identities = 80/89 (89%) Strand = Plus / Plus Query: 1 cccccaccgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtcca 60 ||||| |||||||||| || ||||||||| |||||||||| ||||||||||||||||||| Sbjct: 215 ccccctccgtgatggcgtcgtcggccaccaccgtcgctcccttccaggggctcaagtcca 274 Query: 61 ccgccggccttcccgtcagccgccgctcc 89 |||||||| | |||||| |||||||||| Sbjct: 275 ccgccggcatgcccgtcgcccgccgctcc 303
>dbj|AK119219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-F11, full insert sequence Length = 828 Score = 105 bits (53), Expect = 3e-20 Identities = 80/89 (89%) Strand = Plus / Plus Query: 1 cccccaccgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtcca 60 ||||| |||||||||| || ||||||||| |||||||||| ||||||||||||||||||| Sbjct: 61 ccccctccgtgatggcgtcgtcggccaccaccgtcgctcccttccaggggctcaagtcca 120 Query: 61 ccgccggccttcccgtcagccgccgctcc 89 |||||||| | |||||| |||||||||| Sbjct: 121 ccgccggcatgcccgtcgcccgccgctcc 149
>dbj|AK070556.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062J10, full insert sequence Length = 2409 Score = 105 bits (53), Expect = 3e-20 Identities = 80/89 (89%) Strand = Plus / Plus Query: 1 cccccaccgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtcca 60 ||||| |||||||||| || ||||||||| |||||||||| ||||||||||||||||||| Sbjct: 62 ccccctccgtgatggcgtcgtcggccaccaccgtcgctcccttccaggggctcaagtcca 121 Query: 61 ccgccggccttcccgtcagccgccgctcc 89 |||||||| | |||||| |||||||||| Sbjct: 122 ccgccggcatgcccgtcgcccgccgctcc 150
>dbj|AK061611.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F07, full insert sequence Length = 830 Score = 105 bits (53), Expect = 3e-20 Identities = 80/89 (89%) Strand = Plus / Plus Query: 1 cccccaccgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtcca 60 ||||| |||||||||| || ||||||||| |||||||||| ||||||||||||||||||| Sbjct: 64 ccccctccgtgatggcgtcgtcggccaccaccgtcgctcccttccaggggctcaagtcca 123 Query: 61 ccgccggccttcccgtcagccgccgctcc 89 |||||||| | |||||| |||||||||| Sbjct: 124 ccgccggcatgcccgtcgcccgccgctcc 152
>emb|AL731739.4|CNS08C7O Oryza sativa chromosome 12, . BAC OSJNBa0056I18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145890 Score = 105 bits (53), Expect = 3e-20 Identities = 80/89 (89%) Strand = Plus / Plus Query: 1 cccccaccgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtcca 60 ||||| |||||||||| || ||||||||| |||||||||| ||||||||||||||||||| Sbjct: 82225 ccccctccgtgatggcgtcgtcggccaccaccgtcgctcccttccaggggctcaagtcca 82284 Query: 61 ccgccggccttcccgtcagccgccgctcc 89 |||||||| | |||||| |||||||||| Sbjct: 82285 ccgccggcatgcccgtcgcccgccgctcc 82313
>gb|AF052305.1|AF052305 Oryza sativa ribulose 1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 835 Score = 105 bits (53), Expect = 3e-20 Identities = 80/89 (89%) Strand = Plus / Plus Query: 1 cccccaccgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtcca 60 ||||| |||||||||| || ||||||||| |||||||||| ||||||||||||||||||| Sbjct: 50 ccccctccgtgatggcgtcgtcggccaccaccgtcgctcccttccaggggctcaagtcca 109 Query: 61 ccgccggccttcccgtcagccgccgctcc 89 |||||||| | |||||| |||||||||| Sbjct: 110 ccgccggcatgcccgtcgcccgccgctcc 138
>gb|AF017364.1|AF017364 Oryza sativa ribulose 1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 854 Score = 105 bits (53), Expect = 3e-20 Identities = 80/89 (89%) Strand = Plus / Plus Query: 1 cccccaccgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtcca 60 ||||| |||||||||| || ||||||||| |||||||||| ||||||||||||||||||| Sbjct: 87 ccccctccgtgatggcgtcgtcggccaccaccgtcgctcccttccaggggctcaagtcca 146 Query: 61 ccgccggccttcccgtcagccgccgctcc 89 |||||||| | |||||| |||||||||| Sbjct: 147 ccgccggcatgcccgtcgcccgccgctcc 175
>dbj|D00643.1|RICRUBPC1 Oryza sativa (japonica cultivar-group) mRNA for the small subunit of ribulose-1,5-bisphosphate carboxylase, complete cds, clone pOSSS1139 Length = 830 Score = 105 bits (53), Expect = 3e-20 Identities = 80/89 (89%) Strand = Plus / Plus Query: 1 cccccaccgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtcca 60 ||||| |||||||||| || ||||||||| |||||||||| ||||||||||||||||||| Sbjct: 59 ccccctccgtgatggcgtcgtcggccaccaccgtcgctcccttccaggggctcaagtcca 118 Query: 61 ccgccggccttcccgtcagccgccgctcc 89 |||||||| | |||||| |||||||||| Sbjct: 119 ccgccggcatgcccgtcgcccgccgctcc 147
>dbj|AB067656.1| Oryza sativa (japonica cultivar-group) OsrbcS gene for small subunit of ribulose-1,5-bisphosphate carboxylase, promoter region and partial cds Length = 1815 Score = 105 bits (53), Expect = 3e-20 Identities = 80/89 (89%) Strand = Plus / Plus Query: 1 cccccaccgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtcca 60 ||||| |||||||||| || ||||||||| |||||||||| ||||||||||||||||||| Sbjct: 1555 ccccctccgtgatggcgtcgtcggccaccaccgtcgctcccttccaggggctcaagtcca 1614 Query: 61 ccgccggccttcccgtcagccgccgctcc 89 |||||||| | |||||| |||||||||| Sbjct: 1615 ccgccggcatgcccgtcgcccgccgctcc 1643
>emb|Y00322.1|ZMRBCS Maize rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (EC 4.1.1.39) Length = 1648 Score = 103 bits (52), Expect = 1e-19 Identities = 73/80 (91%) Strand = Plus / Plus Query: 10 tgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcc 69 |||||||||| ||||||||| |||||||||| |||||||||||||||||||||||| ||| Sbjct: 507 tgatggcctcgtcggccaccgccgtcgctccgttccaggggctcaagtccaccgccagcc 566 Query: 70 ttcccgtcagccgccgctcc 89 | |||||| |||||||||| Sbjct: 567 tccccgtcgcccgccgctcc 586
>emb|X06535.1|ZMRUBSSU Maize mRNA for ribulose-1,5-bisphosphate carboxylase small subunit (RuBPC; EC 4.1.1.39) Length = 830 Score = 103 bits (52), Expect = 1e-19 Identities = 73/80 (91%) Strand = Plus / Plus Query: 10 tgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcc 69 |||||||||| ||||||||| |||||||||| |||||||||||||||||||||||| ||| Sbjct: 82 tgatggcctcgtcggccaccgccgtcgctccgttccaggggctcaagtccaccgccagcc 141 Query: 70 ttcccgtcagccgccgctcc 89 | |||||| |||||||||| Sbjct: 142 tccccgtcgcccgccgctcc 161
>dbj|D00170.1|MZEPCSSU Zea mays mRNA for ribulose 1,5-bisphosphate carboxylase small subunit, complete cds Length = 830 Score = 103 bits (52), Expect = 1e-19 Identities = 73/80 (91%) Strand = Plus / Plus Query: 10 tgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcc 69 |||||||||| ||||||||| |||||||||| |||||||||||||||||||||||| ||| Sbjct: 82 tgatggcctcgtcggccaccgccgtcgctccgttccaggggctcaagtccaccgccagcc 141 Query: 70 ttcccgtcagccgccgctcc 89 | |||||| |||||||||| Sbjct: 142 tccccgtcgcccgccgctcc 161
>dbj|AB020952.1| Aegilops searsii DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sea-B Length = 728 Score = 101 bits (51), Expect = 4e-19 Identities = 92/105 (87%), Gaps = 3/105 (2%) Strand = Plus / Plus Query: 8 cgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccgg 67 ||||||||| || ||||| ||| ||||||| || |||||||||||||||||||| ||||| Sbjct: 1 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 60 Query: 68 ccttcccgtcagccgccgctccaacggcgctagcctcggcagcgt 112 || ||||||||||||||||||| |||| |||||||||||||| Sbjct: 61 tctccccgtcagccgccgctccagcggc---agcctcggcagcgt 102
>dbj|AB020950.1| Aegilops sharonensis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sha-B Length = 792 Score = 101 bits (51), Expect = 4e-19 Identities = 92/105 (87%), Gaps = 3/105 (2%) Strand = Plus / Plus Query: 8 cgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccgg 67 |||||||||||| ||||| ||| ||||||| || ||||||||||||||||| || ||||| Sbjct: 1 cgtgatggcctcgtcggctaccaccgtcgcacccttccaggggctcaagtcgacagccgg 60 Query: 68 ccttcccgtcagccgccgctccaacggcgctagcctcggcagcgt 112 || ||||||||||||||||||| |||| |||||||||||||| Sbjct: 61 tctccccgtcagccgccgctcca---gcgccagcctcggcagcgt 102
>dbj|AB020946.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe1-B Length = 787 Score = 101 bits (51), Expect = 4e-19 Identities = 92/105 (87%), Gaps = 3/105 (2%) Strand = Plus / Plus Query: 8 cgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccgg 67 ||||||||| || ||||| ||| ||||||| || |||||||||||||||||||| ||||| Sbjct: 1 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 60 Query: 68 ccttcccgtcagccgccgctccaacggcgctagcctcggcagcgt 112 || ||||||||||||||||||| |||| |||||||||||||| Sbjct: 61 tctccccgtcagccgccgctcca---gcgccagcctcggcagcgt 102
>dbj|AB020944.1| Agropyron intermedium DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Agr-A Length = 604 Score = 101 bits (51), Expect = 4e-19 Identities = 92/105 (87%), Gaps = 3/105 (2%) Strand = Plus / Plus Query: 8 cgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccgg 67 ||||||||| || ||||| ||| ||||||| || |||||||||||||||||||| ||||| Sbjct: 1 cgtgatggcttcctcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 60 Query: 68 ccttcccgtcagccgccgctccaacggcgctagcctcggcagcgt 112 || ||||||||||||||||||| |||| |||||||||||||| Sbjct: 61 tctgcccgtcagccgccgctccagcggc---agcctcggcagcgt 102
>dbj|AB020943.1| Hordeum vulgare DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Hor-A Length = 605 Score = 101 bits (51), Expect = 4e-19 Identities = 92/105 (87%), Gaps = 3/105 (2%) Strand = Plus / Plus Query: 8 cgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccgg 67 ||||||||| || ||||| ||| ||||||| || |||||||||||||||||||| ||||| Sbjct: 1 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 60 Query: 68 ccttcccgtcagccgccgctccaacggcgctagcctcggcagcgt 112 || ||||||||||||||||||| |||| |||||||||||||| Sbjct: 61 tctccccgtcagccgccgctcca---gcgccagcctcggcagcgt 102
>dbj|AB020938.1| Aegilops squarrosa DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Squ-A Length = 607 Score = 101 bits (51), Expect = 4e-19 Identities = 92/105 (87%), Gaps = 3/105 (2%) Strand = Plus / Plus Query: 8 cgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccgg 67 ||||||||| || ||||| ||| ||||||| || |||||||||||||||||||| ||||| Sbjct: 1 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 60 Query: 68 ccttcccgtcagccgccgctccaacggcgctagcctcggcagcgt 112 || ||||||||||||||||||| |||| |||||||||||||| Sbjct: 61 tctgcccgtcagccgccgctccagcggc---agcctcggcagcgt 102
>dbj|AB020936.1| Aegilops bicornis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Bic-A Length = 605 Score = 101 bits (51), Expect = 4e-19 Identities = 92/105 (87%), Gaps = 3/105 (2%) Strand = Plus / Plus Query: 8 cgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccgg 67 ||||||||| || ||||| ||| ||||||| || |||||||||||||||||||| ||||| Sbjct: 1 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 60 Query: 68 ccttcccgtcagccgccgctccaacggcgctagcctcggcagcgt 112 || ||||||||||||||||||| |||| |||||||||||||| Sbjct: 61 tctgcccgtcagccgccgctccagcggc---agcctcggcagcgt 102
>dbj|AB020935.1| Aegilops sharonensis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sha-A Length = 605 Score = 101 bits (51), Expect = 4e-19 Identities = 92/105 (87%), Gaps = 3/105 (2%) Strand = Plus / Plus Query: 8 cgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccgg 67 ||||||||| || ||||| ||| ||||||| || |||||||||||||||||||| ||||| Sbjct: 1 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 60 Query: 68 ccttcccgtcagccgccgctccaacggcgctagcctcggcagcgt 112 || ||||||||||||||||||| |||| |||||||||||||| Sbjct: 61 tctgcccgtcagccgccgctccagcggc---agcctcggcagcgt 102
>dbj|AB020933.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-A2 Length = 605 Score = 101 bits (51), Expect = 4e-19 Identities = 92/105 (87%), Gaps = 3/105 (2%) Strand = Plus / Plus Query: 8 cgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccgg 67 ||||||||| || ||||| ||| ||||||| || |||||||||||||||||||| ||||| Sbjct: 1 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 60 Query: 68 ccttcccgtcagccgccgctccaacggcgctagcctcggcagcgt 112 || ||||||||||||||||||| |||| |||||||||||||| Sbjct: 61 tctgcccgtcagccgccgctccagcggc---agcctcggcagcgt 102
>dbj|AB020932.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-A1 Length = 605 Score = 101 bits (51), Expect = 4e-19 Identities = 92/105 (87%), Gaps = 3/105 (2%) Strand = Plus / Plus Query: 8 cgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccgg 67 ||||||||| || ||||| ||| ||||||| || |||||||||||||||||||| ||||| Sbjct: 1 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 60 Query: 68 ccttcccgtcagccgccgctccaacggcgctagcctcggcagcgt 112 || ||||||||||||||||||| |||| |||||||||||||| Sbjct: 61 tctgcccgtcagccgccgctccagcggc---agcctcggcagcgt 102
>dbj|AB042069.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:6, subclone:16 Length = 5980 Score = 101 bits (51), Expect = 4e-19 Identities = 84/95 (88%) Strand = Plus / Plus Query: 1 cccccaccgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtcca 60 ||||| |||||||||| || ||||| ||| ||||||| || ||||||||||||||||||| Sbjct: 630 cccccgccgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtcca 689 Query: 61 ccgccggccttcccgtcagccgccgctccaacggc 95 | ||||| || ||||||||||||||||||| |||| Sbjct: 690 cagccggtctccccgtcagccgccgctccagcggc 724
>dbj|AB042065.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase Small subunit, complete cds, clone:p6-1 Length = 638 Score = 101 bits (51), Expect = 4e-19 Identities = 84/95 (88%) Strand = Plus / Plus Query: 1 cccccaccgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtcca 60 ||||| |||||||||| || ||||| ||| ||||||| || ||||||||||||||||||| Sbjct: 5 cccccgccgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtcca 64 Query: 61 ccgccggccttcccgtcagccgccgctccaacggc 95 | ||||| || ||||||||||||||||||| |||| Sbjct: 65 cagccggtctccccgtcagccgccgctccagcggc 99
>gb|AF192773.1|AF192773 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 99.6 bits (50), Expect = 2e-18 Identities = 71/78 (91%) Strand = Plus / Plus Query: 9 gtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggc 68 |||||||| || ||||||||||| ||||| || |||||||||||||||||||| || ||| Sbjct: 1 gtgatggcttcttcggccacctcggtcgcgcccttccaggggctcaagtccactgctggc 60 Query: 69 cttcccgtcagccgccgc 86 |||||||||||||||||| Sbjct: 61 cttcccgtcagccgccgc 78
>gb|AF104250.1|AF104250 Avena maroccana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 99.6 bits (50), Expect = 2e-18 Identities = 71/78 (91%) Strand = Plus / Plus Query: 9 gtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggc 68 |||||||| || ||||||||||||||||| || |||||||| |||||||||||||| ||| Sbjct: 1 gtgatggcttcttcggccacctccgtcgcgcccttccagggcctcaagtccaccgctggc 60 Query: 69 cttcccgtcagccgccgc 86 || ||||||||||||||| Sbjct: 61 ctccccgtcagccgccgc 78
>gb|AF096617.1|AF096617 Avena sterilis subsp. ludoviciana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, partial cds Length = 504 Score = 99.6 bits (50), Expect = 2e-18 Identities = 71/78 (91%) Strand = Plus / Plus Query: 9 gtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggc 68 |||||||| || ||||||||||| ||||| || |||||||||||||||||||| || ||| Sbjct: 1 gtgatggcttcgtcggccacctcggtcgcgcccttccaggggctcaagtccactgctggc 60 Query: 69 cttcccgtcagccgccgc 86 |||||||||||||||||| Sbjct: 61 cttcccgtcagccgccgc 78
>gb|M37328.1|WHTRUBIAA T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase (RUBISCO) gene, exons 1 and 2 Length = 2205 Score = 99.6 bits (50), Expect = 2e-18 Identities = 97/112 (86%), Gaps = 3/112 (2%) Strand = Plus / Plus Query: 1 cccccaccgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtcca 60 ||||| |||||||||| || ||||| ||| ||||||| || |||||||| |||||||||| Sbjct: 700 cccccgccgtgatggcttcgtcggctaccaccgtcgcacccttccagggtctcaagtcca 759 Query: 61 ccgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgt 112 | |||||||| ||||||||||||||||||| ||| |||||||||||||| Sbjct: 760 cagccggcctgcccgtcagccgccgctccaggggc---agcctcggcagcgt 808
>dbj|AB042067.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p10-1 Length = 629 Score = 99.6 bits (50), Expect = 2e-18 Identities = 80/90 (88%) Strand = Plus / Plus Query: 1 cccccaccgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtcca 60 ||||| |||||||||| || ||||| ||| ||||||| || ||||||||||||||||||| Sbjct: 5 cccccgccgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtcca 64 Query: 61 ccgccggccttcccgtcagccgccgctcca 90 | ||||| || ||||||||||||||||||| Sbjct: 65 cagccggtctgcccgtcagccgccgctcca 94
>emb|AJ635206.1| Triticum durum ssp. durum partial mRNA for putative rubisco small subunit (rbcS gene) Length = 518 Score = 95.6 bits (48), Expect = 3e-17 Identities = 90/104 (86%) Strand = Plus / Plus Query: 9 gtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggc 68 |||||||| || ||||||||||||||||| || |||||||| |||||||| |||| |||| Sbjct: 3 gtgatggcttcctcggccacctccgtcgcacccttccagggtctcaagtcgaccgacggc 62 Query: 69 cttcccgtcagccgccgctccaacggcgctagcctcggcagcgt 112 || ||| ||||||||||||||| | |||| ||||| ||||||| Sbjct: 63 ctgcccatcagccgccgctccagcagcgccggcctcagcagcgt 106
>dbj|AB020941.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone CS-A Length = 605 Score = 95.6 bits (48), Expect = 3e-17 Identities = 78/88 (88%) Strand = Plus / Plus Query: 8 cgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccgg 67 ||||||||| || ||||| ||| ||||||| || |||||||||||||||||||| ||||| Sbjct: 1 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 60 Query: 68 ccttcccgtcagccgccgctccaacggc 95 || ||||||||||||||||||| |||| Sbjct: 61 tctgcccgtcagccgccgctccagcggc 88
>dbj|AB020940.1| Triticum turgidum subsp. dicoccoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Dic-A Length = 605 Score = 95.6 bits (48), Expect = 3e-17 Identities = 78/88 (88%) Strand = Plus / Plus Query: 8 cgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccgg 67 ||||||||| || ||||| ||| ||||||| || |||||||||||||||||||| ||||| Sbjct: 1 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 60 Query: 68 ccttcccgtcagccgccgctccaacggc 95 || ||||||||||||||||||| |||| Sbjct: 61 tctgcccgtcagccgccgctccagcggc 88
>dbj|AB020939.1| Triticum timopheevii subsp. armeniacum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ara-A Length = 604 Score = 95.6 bits (48), Expect = 3e-17 Identities = 78/88 (88%) Strand = Plus / Plus Query: 8 cgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccgg 67 ||||||||| || ||||| ||| ||||||| || |||||||||||||||||||| ||||| Sbjct: 1 cgtgatggcttcctcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 60 Query: 68 ccttcccgtcagccgccgctccaacggc 95 || ||||||||||||||||||| |||| Sbjct: 61 tctccccgtcagccgccgctccagcggc 88
>dbj|AB020937.1| Aegilops searsii DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sea-A Length = 611 Score = 95.6 bits (48), Expect = 3e-17 Identities = 78/88 (88%) Strand = Plus / Plus Query: 8 cgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccgg 67 ||||||||| || ||||| ||| ||||||| || |||||||||||||||||||| ||||| Sbjct: 1 cgtgatggcttcctcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 60 Query: 68 ccttcccgtcagccgccgctccaacggc 95 || ||||||||||||||||||| |||| Sbjct: 61 tctccccgtcagccgccgctccagcggc 88
>emb|AJ131737.1|SCE131737 Secale cereale mRNA for hypothetical protein, clone 5 Length = 845 Score = 93.7 bits (47), Expect = 1e-16 Identities = 74/83 (89%) Strand = Plus / Plus Query: 7 ccgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccg 66 |||||||||| || || |||||| ||||||| || ||||||||||||||||| ||||||| Sbjct: 78 ccgtgatggcttcgtccgccaccaccgtcgcgcccttccaggggctcaagtcgaccgccg 137 Query: 67 gccttcccgtcagccgccgctcc 89 |||| |||||| ||||||||||| Sbjct: 138 gcctccccgtcggccgccgctcc 160
>dbj|AB020959.1| Secale cereale DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sec-B Length = 789 Score = 93.7 bits (47), Expect = 1e-16 Identities = 91/105 (86%), Gaps = 3/105 (2%) Strand = Plus / Plus Query: 8 cgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccgg 67 ||||||||| || ||||| ||| |||||| || |||||||||||||||||||| ||||| Sbjct: 1 cgtgatggcttcctcggctaccagcgtcgcacccttccaggggctcaagtccacggccgg 60 Query: 68 ccttcccgtcagccgccgctccaacggcgctagcctcggcagcgt 112 || ||||||||||||||||||| |||| |||||||||||||| Sbjct: 61 tctccccgtcagccgccgctccagcggc---agcctcggcagcgt 102
>dbj|AB020958.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone CS-B2 Length = 781 Score = 93.7 bits (47), Expect = 1e-16 Identities = 91/105 (86%), Gaps = 3/105 (2%) Strand = Plus / Plus Query: 8 cgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccgg 67 ||||||||| || ||||| ||| |||| || || |||||||||||||||||||| ||||| Sbjct: 1 cgtgatggcttcgtcggctaccaccgttgcacccttccaggggctcaagtccacagccgg 60 Query: 68 ccttcccgtcagccgccgctccaacggcgctagcctcggcagcgt 112 || ||||||||||||||||||| |||| |||||||||||||| Sbjct: 61 tctccccgtcagccgccgctcca---gcgccagcctcggcagcgt 102
>dbj|AB020949.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-B Length = 792 Score = 93.7 bits (47), Expect = 1e-16 Identities = 91/105 (86%), Gaps = 3/105 (2%) Strand = Plus / Plus Query: 8 cgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccgg 67 ||||||||| || ||||| ||| ||||||| || ||||||||||||||||| || ||||| Sbjct: 1 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtcgacagccgg 60 Query: 68 ccttcccgtcagccgccgctccaacggcgctagcctcggcagcgt 112 || ||||||||||||||||||| |||| |||||||||||||| Sbjct: 61 tctccccgtcagccgccgctcca---gcgccagcctcggcagcgt 102
>dbj|AB020948.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-B Length = 772 Score = 93.7 bits (47), Expect = 1e-16 Identities = 91/105 (86%), Gaps = 3/105 (2%) Strand = Plus / Plus Query: 8 cgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccgg 67 ||||||||| || ||||| ||| ||||||| || |||||||||||||||||||| ||||| Sbjct: 1 cgtgatggcttcctcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 60 Query: 68 ccttcccgtcagccgccgctccaacggcgctagcctcggcagcgt 112 || |||||| |||||||||||| |||| |||||||||||||| Sbjct: 61 tctccccgtcggccgccgctccagcggc---agcctcggcagcgt 102
>dbj|AB020947.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe2-B Length = 738 Score = 93.7 bits (47), Expect = 1e-16 Identities = 91/105 (86%), Gaps = 3/105 (2%) Strand = Plus / Plus Query: 8 cgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccgg 67 ||||||||| || ||||| ||| ||||||| || |||||||||||||||||||| ||||| Sbjct: 1 cgtgatggcttcctcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 60 Query: 68 ccttcccgtcagccgccgctccaacggcgctagcctcggcagcgt 112 || |||||| |||||||||||| |||| |||||||||||||| Sbjct: 61 tctccccgtcggccgccgctccagcggc---agcctcggcagcgt 102
>dbj|AB020934.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-A3 Length = 605 Score = 93.7 bits (47), Expect = 1e-16 Identities = 91/105 (86%), Gaps = 3/105 (2%) Strand = Plus / Plus Query: 8 cgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccgg 67 ||||||||| || ||||| ||| ||||||| || ||||||||||||||||| || ||||| Sbjct: 1 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtcgacagccgg 60 Query: 68 ccttcccgtcagccgccgctccaacggcgctagcctcggcagcgt 112 || ||||||||||||||||||| |||| |||||||||||||| Sbjct: 61 tctccccgtcagccgccgctcca---gcgccagcctcggcagcgt 102
>gb|AF202648.1|AF202648 Avena maroccana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 620 Score = 91.7 bits (46), Expect = 4e-16 Identities = 70/78 (89%) Strand = Plus / Plus Query: 9 gtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggc 68 |||||||| || || |||||||||||||| || |||||||| |||||||||||||| ||| Sbjct: 1 gtgatggcttcttccgccacctccgtcgcgcccttccagggcctcaagtccaccgctggc 60 Query: 69 cttcccgtcagccgccgc 86 || ||||||||||||||| Sbjct: 61 ctccccgtcagccgccgc 78
>gb|AF192780.1|AF192780 Avena maroccana clone Ma7 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 91.7 bits (46), Expect = 4e-16 Identities = 70/78 (89%) Strand = Plus / Plus Query: 9 gtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggc 68 |||||||| || || |||||||||||||| || |||||||| |||||||||||||| ||| Sbjct: 1 gtgatggcttcttccgccacctccgtcgcgcccttccagggcctcaagtccaccgctggc 60 Query: 69 cttcccgtcagccgccgc 86 || ||||||||||||||| Sbjct: 61 ctccccgtcagccgccgc 78
>gb|AF192779.1|AF192779 Avena maroccana clone Ma4 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 91.7 bits (46), Expect = 4e-16 Identities = 70/78 (89%) Strand = Plus / Plus Query: 9 gtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggc 68 |||||||| || ||||||||||| ||||| || ||||||| |||||||||||| || ||| Sbjct: 1 gtgatggcttcttcggccacctcggtcgcgcccttccaggagctcaagtccactgctggc 60 Query: 69 cttcccgtcagccgccgc 86 |||||||||||||||||| Sbjct: 61 cttcccgtcagccgccgc 78
>gb|AF192778.1|AF192778 Avena sterilis subsp. ludoviciana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 91.7 bits (46), Expect = 4e-16 Identities = 70/78 (89%) Strand = Plus / Plus Query: 9 gtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggc 68 |||||||| || || |||||||| ||||| || |||||||||||||||||||| || ||| Sbjct: 1 gtgatggcttcgtccgccacctcggtcgcgcccttccaggggctcaagtccactgctggc 60 Query: 69 cttcccgtcagccgccgc 86 |||||||||||||||||| Sbjct: 61 cttcccgtcagccgccgc 78
>gb|AF192776.1|AF192776 Avena clauda clone Cl5 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 91.7 bits (46), Expect = 4e-16 Identities = 70/78 (89%) Strand = Plus / Plus Query: 9 gtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggc 68 |||||||| || ||||||||||| ||||| || ||||||| |||||||||||| || ||| Sbjct: 1 gtgatggcttcttcggccacctcggtcgcgcccttccaggagctcaagtccactgctggc 60 Query: 69 cttcccgtcagccgccgc 86 |||||||||||||||||| Sbjct: 61 cttcccgtcagccgccgc 78
>gb|AF192775.1|AF192775 Avena strigosa clone Str5 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 91.7 bits (46), Expect = 4e-16 Identities = 70/78 (89%) Strand = Plus / Plus Query: 9 gtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggc 68 |||||||| || |||||||||||||| || || |||||||| |||||||||||||| ||| Sbjct: 1 gtgatggcttcttcggccacctccgttgcgcccttccagggcctcaagtccaccgctggc 60 Query: 69 cttcccgtcagccgccgc 86 || ||||||||||||||| Sbjct: 61 ctccccgtcagccgccgc 78
>gb|AF097360.1|AF097360 Avena strigosa ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 91.7 bits (46), Expect = 4e-16 Identities = 70/78 (89%) Strand = Plus / Plus Query: 9 gtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggc 68 |||||||| || |||||||||||||| || || |||||||| |||||||||||||| ||| Sbjct: 1 gtgatggcttcttcggccacctccgttgcgcccttccagggcctcaagtccaccgctggc 60 Query: 69 cttcccgtcagccgccgc 86 || ||||||||||||||| Sbjct: 61 ctccccgtcagccgccgc 78
>gb|AF104249.1|AF104249 Avena vaviloviana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 91.7 bits (46), Expect = 4e-16 Identities = 70/78 (89%) Strand = Plus / Plus Query: 9 gtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggc 68 |||||||| || ||||||||| | ||||| || |||||||||||||||||||| || ||| Sbjct: 1 gtgatggcttcttcggccaccacggtcgcgcccttccaggggctcaagtccactgctggc 60 Query: 69 cttcccgtcagccgccgc 86 |||||||||||||||||| Sbjct: 61 cttcccgtcagccgccgc 78
>dbj|AB020942.1| Secale cereale DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sec-A Length = 591 Score = 91.7 bits (46), Expect = 4e-16 Identities = 76/86 (88%) Strand = Plus / Plus Query: 10 tgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcc 69 ||||||| || ||||| ||| ||||||| || |||||||||||||||||||| ||||| | Sbjct: 3 tgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggtc 62 Query: 70 ttcccgtcagccgccgctccaacggc 95 | ||||||||||||||||||| |||| Sbjct: 63 tgcccgtcagccgccgctccagcggc 88
>dbj|AB020957.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone CS-B1 Length = 787 Score = 87.7 bits (44), Expect = 6e-15 Identities = 77/88 (87%) Strand = Plus / Plus Query: 8 cgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccgg 67 ||||||||| || ||||| ||| ||||||| || |||||||||||||||||||| ||||| Sbjct: 1 cgtgatggcttcctcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 60 Query: 68 ccttcccgtcagccgccgctccaacggc 95 || |||||| |||||||||||| |||| Sbjct: 61 tctccccgtcggccgccgctccagcggc 88
>dbj|AB020956.1| Triticum turgidum subsp. dicoccoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Dic-B Length = 787 Score = 87.7 bits (44), Expect = 6e-15 Identities = 77/88 (87%) Strand = Plus / Plus Query: 8 cgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccgg 67 ||||||||| || ||||| ||| ||||||| || |||||||||||||||||||| ||||| Sbjct: 1 cgtgatggcttcctcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 60 Query: 68 ccttcccgtcagccgccgctccaacggc 95 || |||||| |||||||||||| |||| Sbjct: 61 tctccccgtcggccgccgctccagcggc 88
>gb|M37477.1|WHTRUBIAB T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase (RUBISCO) gene, complete cds Length = 779 Score = 85.7 bits (43), Expect = 2e-14 Identities = 73/83 (87%) Strand = Plus / Plus Query: 7 ccgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccg 66 |||||||||| || || |||||| ||||||| || ||||||||||||||||| ||||||| Sbjct: 68 ccgtgatggcttcttccgccaccaccgtcgcgcccttccaggggctcaagtcgaccgccg 127 Query: 67 gccttcccgtcagccgccgctcc 89 |||| ||| ||||| |||||||| Sbjct: 128 gcctccccatcagctgccgctcc 150
>gb|AF202647.1|AF202647 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 593 Score = 83.8 bits (42), Expect = 1e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 9 gtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggc 68 |||||||| || ||||||||||| ||||| || |||||||| ||||||||||| || ||| Sbjct: 1 gtgatggcttcttcggccacctctgtcgccccattccagggcctcaagtccactgctggc 60 Query: 69 cttcccgtcagccg 82 |||||||||||||| Sbjct: 61 cttcccgtcagccg 74
>gb|AF202645.1|AF202645 Avena clauda clone ClG2 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 600 Score = 83.8 bits (42), Expect = 1e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 9 gtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggc 68 |||||||| || || |||||||||||||| ||||||||||| ||||||||||| || || Sbjct: 1 gtgatggcttcgtccgccacctccgtcgcgcctttccagggcctcaagtccacggcaggg 60 Query: 69 cttcccgtcagccgccgc 86 || ||||||||||||||| Sbjct: 61 ctccccgtcagccgccgc 78
>dbj|AK070257.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042N11, full insert sequence Length = 845 Score = 83.8 bits (42), Expect = 1e-13 Identities = 72/82 (87%) Strand = Plus / Plus Query: 9 gtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggc 68 |||||||| || |||||||||||||| ||||| |||||||||||||||||||| || ||| Sbjct: 77 gtgatggcttcgtcggccacctccgtggctcccttccaggggctcaagtccactgcgggc 136 Query: 69 cttcccgtcagccgccgctcca 90 || || || | ||||||||||| Sbjct: 137 ctcccggtgaaccgccgctcca 158
>dbj|AK068266.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149A10, full insert sequence Length = 1999 Score = 83.8 bits (42), Expect = 1e-13 Identities = 72/82 (87%) Strand = Plus / Plus Query: 9 gtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggc 68 |||||||| || |||||||||||||| ||||| |||||||||||||||||||| || ||| Sbjct: 79 gtgatggcttcgtcggccacctccgtggctcccttccaggggctcaagtccactgcgggc 138 Query: 69 cttcccgtcagccgccgctcca 90 || || || | ||||||||||| Sbjct: 139 ctcccggtgaaccgccgctcca 160
>gb|AF192774.1|AF192774 Avena strigosa clone Str3 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 83.8 bits (42), Expect = 1e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 9 gtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggc 68 |||||||| || || ||||||||||| || || |||||||| |||||||||||||| ||| Sbjct: 1 gtgatggcttcttccgccacctccgttgcgcccttccagggcctcaagtccaccgctggc 60 Query: 69 cttcccgtcagccgccgc 86 || ||||||||||||||| Sbjct: 61 ctccccgtcagccgccgc 78
>gb|M86717.1|SCFBCS1A Saccharum hybrid cultivar H32-8560 ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit gene, complete cds Length = 2328 Score = 83.8 bits (42), Expect = 1e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 5 caccgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgc 64 ||||||||||||||| || |||||| ||| ||||| ||||||||||||||||||||||| Sbjct: 1180 caccgtgatggcctcgtccgccaccgccgctgctccgttccaggggctcaagtccaccgc 1239 Query: 65 cggccttcccgtcagccgccgctcca 90 | |||| |||||| ||| ||||||| Sbjct: 1240 cagcctccccgtcgcccgacgctcca 1265
>gb|AF097361.1|AF097361 Avena clauda ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 83.8 bits (42), Expect = 1e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 9 gtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggc 68 |||||||| || || |||||| ||||||| || |||||||| |||||||||||||| ||| Sbjct: 1 gtgatggcttcgtccgccaccaccgtcgcaccattccagggcctcaagtccaccgctggc 60 Query: 69 cttcccgtcagccgccgc 86 || ||||||||||||||| Sbjct: 61 ctccccgtcagccgccgc 78
>emb|X07515.1|OSRBCS Rice rbcS gene for ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit (EC 4.1.1.39) Length = 1110 Score = 79.8 bits (40), Expect = 2e-12 Identities = 62/68 (91%), Gaps = 1/68 (1%) Strand = Plus / Plus Query: 1 cccccaccgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtcca 60 ||||| |||||||||| || ||||||||| |||||||||| |||||||| |||||||||| Sbjct: 265 ccccctccgtgatggcgtcgtcggccaccaccgtcgctcccttccaggg-ctcaagtcca 323 Query: 61 ccgccggc 68 |||||||| Sbjct: 324 ccgccggc 331
>dbj|AB020931.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-A3 Length = 604 Score = 79.8 bits (40), Expect = 2e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 8 cgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccgg 67 ||||||||| || ||||| ||| ||||| | || ||||| |||||||||||||| ||||| Sbjct: 1 cgtgatggcttcctcggctaccaccgtcacacccttccacgggctcaagtccacagccgg 60 Query: 68 ccttcccgtcagccgccgctccaacggc 95 || ||||||||||||||||||| |||| Sbjct: 61 tctccccgtcagccgccgctccagcggc 88
>dbj|AB020930.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-A2 Length = 604 Score = 79.8 bits (40), Expect = 2e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 8 cgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccgg 67 ||||||||| || ||||| ||| ||||| | || ||||| |||||||||||||| ||||| Sbjct: 1 cgtgatggcttcctcggctaccaccgtcacacccttccacgggctcaagtccacagccgg 60 Query: 68 ccttcccgtcagccgccgctccaacggc 95 || ||||||||||||||||||| |||| Sbjct: 61 tctccccgtcagccgccgctccagcggc 88
>dbj|AB020929.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-A1 Length = 604 Score = 79.8 bits (40), Expect = 2e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 8 cgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccgg 67 ||||||||| || ||||| ||| ||||| | || ||||| |||||||||||||| ||||| Sbjct: 1 cgtgatggcttcctcggctaccaccgtcacacccttccacgggctcaagtccacagccgg 60 Query: 68 ccttcccgtcagccgccgctccaacggc 95 || ||||||||||||||||||| |||| Sbjct: 61 tctccccgtcagccgccgctccagcggc 88
>dbj|AB020928.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe2-A Length = 604 Score = 79.8 bits (40), Expect = 2e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 8 cgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccgg 67 ||||||||| || ||||| ||| ||||| | || ||||| |||||||||||||| ||||| Sbjct: 1 cgtgatggcttcctcggctaccaccgtcacacccttccacgggctcaagtccacagccgg 60 Query: 68 ccttcccgtcagccgccgctccaacggc 95 || ||||||||||||||||||| |||| Sbjct: 61 tctccccgtcagccgccgctccagcggc 88
>dbj|AB020927.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe1-A1 Length = 604 Score = 79.8 bits (40), Expect = 2e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 8 cgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccgg 67 ||||||||| || ||||| ||| ||||| | || ||||| |||||||||||||| ||||| Sbjct: 1 cgtgatggcttcctcggctaccaccgtcacacccttccacgggctcaagtccacagccgg 60 Query: 68 ccttcccgtcagccgccgctccaacggc 95 || ||||||||||||||||||| |||| Sbjct: 61 tctccccgtcagccgccgctccagcggc 88
>dbj|AB020926.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds Length = 604 Score = 79.8 bits (40), Expect = 2e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 8 cgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccgg 67 ||||||||| || ||||| ||| ||||| | || ||||| |||||||||||||| ||||| Sbjct: 1 cgtgatggcttcctcggctaccaccgtcacacccttccacgggctcaagtccacagccgg 60 Query: 68 ccttcccgtcagccgccgctccaacggc 95 || ||||||||||||||||||| |||| Sbjct: 61 tctccccgtcagccgccgctccagcggc 88
>dbj|AB020945.1| Avena sativa DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ave-A Length = 590 Score = 77.8 bits (39), Expect = 6e-12 Identities = 69/79 (87%) Strand = Plus / Plus Query: 8 cgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccgg 67 ||||| ||| || ||||| ||||||||||| || |||||||| ||||||||||| || || Sbjct: 1 cgtgacggcttcctcggcgacctccgtcgcccccttccagggcctcaagtccactgctgg 60 Query: 68 ccttcccgtcagccgccgc 86 |||||||||| |||||||| Sbjct: 61 ccttcccgtcggccgccgc 79
>gb|AF200303.1|AF200303 Avena clauda ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, nuclear gene encoding chloroplast protein, partial cds Length = 594 Score = 75.8 bits (38), Expect = 2e-11 Identities = 68/78 (87%) Strand = Plus / Plus Query: 9 gtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggc 68 |||||||| || || ||||||||||| || || |||||||| |||||||||||||| ||| Sbjct: 1 gtgatggcttcgtccgccacctccgttgcgcccttccagggcctcaagtccaccgctggc 60 Query: 69 cttcccgtcagccgccgc 86 || |||||||||||||| Sbjct: 61 ctcgccgtcagccgccgc 78
>gb|AF097359.1|AF097359 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 75.8 bits (38), Expect = 2e-11 Identities = 65/74 (87%) Strand = Plus / Plus Query: 9 gtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggc 68 |||||||| || || |||||| ||||||| || |||||||| |||||||||||||| ||| Sbjct: 1 gtgatggcttcgtccgccaccaccgtcgcacccttccagggcctcaagtccaccgctggc 60 Query: 69 cttcccgtcagccg 82 || ||||||||||| Sbjct: 61 ctccccgtcagccg 74
>dbj|AB020951.1| Aegilops bicornis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Bic-B Length = 783 Score = 69.9 bits (35), Expect = 1e-09 Identities = 88/105 (83%), Gaps = 3/105 (2%) Strand = Plus / Plus Query: 8 cgtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccgg 67 ||||||||| || ||||| ||| |||||| || |||||||||||||||||||| | ||| Sbjct: 1 cgtgatggcttcgtcggctaccagcgtcgcacccttccaggggctcaagtccacaggcgg 60 Query: 68 ccttcccgtcagccgccgctccaacggcgctagcctcggcagcgt 112 || |||||||| |||||||||| ||| |||||||||||||| Sbjct: 61 tctccccgtcagtcgccgctccagaggc---agcctcggcagcgt 102
>gb|AF192777.1|AF192777 Avena clauda clone Cl9 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 67.9 bits (34), Expect = 6e-09 Identities = 67/78 (85%) Strand = Plus / Plus Query: 9 gtgatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggc 68 |||||||| || || |||||| |||| || || |||||||| |||||||||||||| || Sbjct: 1 gtgatggcttcgtccgccaccaccgtggcaccattccagggcctcaagtccaccgcagga 60 Query: 69 cttcccgtcagccgccgc 86 || ||||||||||||||| Sbjct: 61 ctccccgtcagccgccgc 78
>gb|AC115063.8| Mus musculus chromosome 1, clone RP24-400H18, complete sequence Length = 192133 Score = 38.2 bits (19), Expect = 5.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 11 gatggcctcatcggccacc 29 ||||||||||||||||||| Sbjct: 61203 gatggcctcatcggccacc 61221
>emb|AL512591.6| Human DNA sequence from clone RP11-176L21 on chromosome 9, complete sequence Length = 102510 Score = 38.2 bits (19), Expect = 5.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 11 gatggcctcatcggccacc 29 ||||||||||||||||||| Sbjct: 31114 gatggcctcatcggccacc 31132
>gb|AC158765.4| Mus musculus chromosome 1, clone RP24-218I23, complete sequence Length = 130451 Score = 38.2 bits (19), Expect = 5.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 11 gatggcctcatcggccacc 29 ||||||||||||||||||| Sbjct: 80179 gatggcctcatcggccacc 80197
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 38.2 bits (19), Expect = 5.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 15 gcctcatcggccacctccgtcgc 37 |||||||| |||||||||||||| Sbjct: 29725480 gcctcatcagccacctccgtcgc 29725502
>dbj|AP004678.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1136_F03 Length = 110783 Score = 38.2 bits (19), Expect = 5.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 15 gcctcatcggccacctccgtcgc 37 |||||||| |||||||||||||| Sbjct: 23610 gcctcatcagccacctccgtcgc 23632 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 564,710 Number of Sequences: 3902068 Number of extensions: 564710 Number of successful extensions: 41591 Number of sequences better than 10.0: 98 Number of HSP's better than 10.0 without gapping: 98 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 41337 Number of HSP's gapped (non-prelim): 235 length of query: 114 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 93 effective length of database: 17,151,101,840 effective search space: 1595052471120 effective search space used: 1595052471120 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
