ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd20e22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PSA6_ORYSA (Q9LSU3) Proteasome subunit alpha type 6 (EC 3.4.25.1... 73 2e-13
2PSA6_SOYBN (O48551) Proteasome subunit alpha type 6 (EC 3.4.25.1... 73 3e-13
3PSA6_TOBAC (Q9XG77) Proteasome subunit alpha type 6 (EC 3.4.25.1... 71 1e-12
4PSA6A_ARATH (O81146) Proteasome subunit alpha type 6-A (EC 3.4.2... 70 2e-12
5PSA6B_ARATH (O81147) Proteasome subunit alpha type 6-B (EC 3.4.2... 69 4e-12
6PSA6_RAT (P60901) Proteasome subunit alpha type 6 (EC 3.4.25.1) ... 53 2e-07
7PSA6_MOUSE (Q9QUM9) Proteasome subunit alpha type 6 (EC 3.4.25.1... 53 2e-07
8PSA6_HUMAN (P60900) Proteasome subunit alpha type 6 (EC 3.4.25.1... 53 2e-07
9PSA6_SCHPO (O94517) Probable proteasome subunit alpha type 6 (EC... 48 9e-06
10PSA1_TRYBB (Q9GU37) Proteasome subunit alpha type 1 (EC 3.4.25.1... 40 0.002
11PSA6_DROME (Q9XZJ4) Proteasome subunit alpha type 6 (EC 3.4.25.1... 40 0.002
12PSA6_YEAST (P21243) Proteasome component C7-alpha (EC 3.4.25.1) ... 39 0.005
13PSMA_METAC (Q8TPX5) Proteasome alpha subunit (EC 3.4.25.1) (Mult... 38 0.007
14PSA3_RAT (P18422) Proteasome subunit alpha type 3 (EC 3.4.25.1) ... 38 0.009
15PSA3_MOUSE (O70435) Proteasome subunit alpha type 3 (EC 3.4.25.1... 38 0.009
16PSA3_HUMAN (P25788) Proteasome subunit alpha type 3 (EC 3.4.25.1... 38 0.009
17PSMA_METMA (Q8PTU1) Proteasome alpha subunit (EC 3.4.25.1) (Mult... 37 0.012
18PSA5_YEAST (P32379) Proteasome component PUP2 (EC 3.4.25.1) (Mac... 36 0.034
19PSMA_METMP (Q6M0L9) Proteasome alpha subunit (EC 3.4.25.1) (Mult... 35 0.076
20PSA5_SCHPO (Q9UT97) Probable proteasome subunit alpha type 5 (EC... 35 0.076
21PSA5_ENTHI (Q94561) Proteasome subunit alpha type 5 (EC 3.4.25.1) 33 0.17
22PSMA_ARCFU (O29760) Proteasome alpha subunit (EC 3.4.25.1) (Mult... 32 0.49
23PSMA_SULSO (Q9UXC6) Proteasome alpha subunit (EC 3.4.25.1) (Mult... 31 1.1
24PSA1_DICDI (Q27562) Proteasome subunit alpha type 1 (EC 3.4.25.1... 31 1.1
25PSA7L_MOUSE (Q9CWH6) Proteasome subunit alpha type 7-like (EC 3.... 30 1.4
26PSA6_CAEEL (O17586) Proteasome subunit alpha type 6 (EC 3.4.25.1... 30 2.4
27RNF31_HUMAN (Q96EP0) RING finger protein 31 (Zinc in-between-RIN... 29 3.2
28PSMA1_HALVO (Q9V2V6) Proteasome alpha-1 subunit (EC 3.4.25.1) (M... 29 4.1
29Z3H7B_HUMAN (Q9UGR2) Zinc finger CCCH-type domain-containing pro... 29 4.1
30PSA7_CARAU (Q9PTW9) Proteasome subunit alpha type 7 (EC 3.4.25.1... 28 5.4
31PSA4_YEAST (P23638) Proteasome component Y13 (EC 3.4.25.1) (Macr... 28 5.4
32PSA7_DICDI (P34120) Proteasome subunit alpha type 7 (EC 3.4.25.1... 28 5.4
33PSA7A_XENLA (Q9PVY6) Proteasome subunit alpha type 7-A (EC 3.4.2... 28 5.4
34PSA73_DROVI (O16812) Proteasome subunit alpha type 7-1B (EC 3.4.... 28 5.4
35PSA7B_XENLA (Q9PVQ1) Proteasome subunit alpha type 7-B (EC 3.4.2... 28 5.4
36PSA7_CHICK (O13268) Proteasome subunit alpha type 7 (EC 3.4.25.1... 28 9.2
37PSA73_DROME (Q27575) Proteasome subunit alpha type 7-1B (EC 3.4.... 28 9.2
38PSA7_MOUSE (Q9Z2U0) Proteasome subunit alpha type 7 (EC 3.4.25.1... 28 9.2
39PSA7_HUMAN (O14818) Proteasome subunit alpha type 7 (EC 3.4.25.1... 28 9.2

>PSA6_ORYSA (Q9LSU3) Proteasome subunit alpha type 6 (EC 3.4.25.1) (20S|
           proteasome alpha subunit A) (20S proteasome subunit
           alpha-1)
          Length = 246

 Score = 73.2 bits (178), Expect = 2e-13
 Identities = 37/42 (88%), Positives = 38/42 (90%)
 Frame = +3

Query: 3   DKLLDDTSITHLFSITKYTGLLATGLTADARSLVSQARNEAA 128
           DKLLD TS+THLF ITKY GLLATGLTADARSLV QARNEAA
Sbjct: 58  DKLLDHTSVTHLFPITKYIGLLATGLTADARSLVYQARNEAA 99



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>PSA6_SOYBN (O48551) Proteasome subunit alpha type 6 (EC 3.4.25.1) (20S|
           proteasome alpha subunit A) (20S proteasome subunit
           alpha-1) (Proteasome iota subunit)
          Length = 246

 Score = 72.8 bits (177), Expect = 3e-13
 Identities = 35/42 (83%), Positives = 39/42 (92%)
 Frame = +3

Query: 3   DKLLDDTSITHLFSITKYTGLLATGLTADARSLVSQARNEAA 128
           DKLLD+TS+THLF ITKY GLLATG+TADAR+LV QARNEAA
Sbjct: 58  DKLLDNTSVTHLFPITKYLGLLATGMTADARTLVQQARNEAA 99



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>PSA6_TOBAC (Q9XG77) Proteasome subunit alpha type 6 (EC 3.4.25.1) (20S|
           proteasome alpha subunit A) (20S proteasome subunit
           alpha-1)
          Length = 246

 Score = 70.9 bits (172), Expect = 1e-12
 Identities = 34/42 (80%), Positives = 38/42 (90%)
 Frame = +3

Query: 3   DKLLDDTSITHLFSITKYTGLLATGLTADARSLVSQARNEAA 128
           DKLLD TS++HLF ITKY GLLATG+TADAR+LV QARNEAA
Sbjct: 58  DKLLDQTSVSHLFPITKYLGLLATGMTADARTLVQQARNEAA 99



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>PSA6A_ARATH (O81146) Proteasome subunit alpha type 6-A (EC 3.4.25.1)|
           (Proteasome subunit alpha type 1) (20S proteasome alpha
           subunit A-1) (Proteasome component 1)
          Length = 246

 Score = 69.7 bits (169), Expect = 2e-12
 Identities = 33/42 (78%), Positives = 38/42 (90%)
 Frame = +3

Query: 3   DKLLDDTSITHLFSITKYTGLLATGLTADARSLVSQARNEAA 128
           DKLLD +S+THLF ITKY GL+ATG+TADARSLV QARN+AA
Sbjct: 58  DKLLDQSSVTHLFPITKYIGLVATGITADARSLVQQARNQAA 99



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>PSA6B_ARATH (O81147) Proteasome subunit alpha type 6-B (EC 3.4.25.1)|
           (Proteasome subunit alpha type 1) (20S proteasome alpha
           subunit A-2)
          Length = 246

 Score = 68.9 bits (167), Expect = 4e-12
 Identities = 32/42 (76%), Positives = 38/42 (90%)
 Frame = +3

Query: 3   DKLLDDTSITHLFSITKYTGLLATGLTADARSLVSQARNEAA 128
           DKLLD +S++HLF +TKY GLLATG+TAD+RSLV QARNEAA
Sbjct: 58  DKLLDQSSVSHLFPVTKYLGLLATGMTADSRSLVQQARNEAA 99



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>PSA6_RAT (P60901) Proteasome subunit alpha type 6 (EC 3.4.25.1) (Proteasome|
           iota chain) (Macropain iota chain) (Multicatalytic
           endopeptidase complex iota chain)
          Length = 246

 Score = 53.1 bits (126), Expect = 2e-07
 Identities = 25/42 (59%), Positives = 33/42 (78%)
 Frame = +3

Query: 3   DKLLDDTSITHLFSITKYTGLLATGLTADARSLVSQARNEAA 128
           DKLLD +++THLF IT+  G + TG+TAD+RS V +AR EAA
Sbjct: 58  DKLLDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAA 99



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>PSA6_MOUSE (Q9QUM9) Proteasome subunit alpha type 6 (EC 3.4.25.1) (Proteasome|
           iota chain) (Macropain iota chain) (Multicatalytic
           endopeptidase complex iota chain)
          Length = 246

 Score = 53.1 bits (126), Expect = 2e-07
 Identities = 25/42 (59%), Positives = 33/42 (78%)
 Frame = +3

Query: 3   DKLLDDTSITHLFSITKYTGLLATGLTADARSLVSQARNEAA 128
           DKLLD +++THLF IT+  G + TG+TAD+RS V +AR EAA
Sbjct: 58  DKLLDSSTVTHLFKITESIGCVMTGMTADSRSQVQRARYEAA 99



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>PSA6_HUMAN (P60900) Proteasome subunit alpha type 6 (EC 3.4.25.1) (Proteasome|
           iota chain) (Macropain iota chain) (Multicatalytic
           endopeptidase complex iota chain) (27 kDa prosomal
           protein) (PROS-27) (p27K)
          Length = 246

 Score = 53.1 bits (126), Expect = 2e-07
 Identities = 25/42 (59%), Positives = 33/42 (78%)
 Frame = +3

Query: 3   DKLLDDTSITHLFSITKYTGLLATGLTADARSLVSQARNEAA 128
           DKLLD +++THLF IT+  G + TG+TAD+RS V +AR EAA
Sbjct: 58  DKLLDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAA 99



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>PSA6_SCHPO (O94517) Probable proteasome subunit alpha type 6 (EC 3.4.25.1)|
          Length = 244

 Score = 47.8 bits (112), Expect = 9e-06
 Identities = 23/42 (54%), Positives = 32/42 (76%)
 Frame = +3

Query: 3   DKLLDDTSITHLFSITKYTGLLATGLTADARSLVSQARNEAA 128
           DKL+D +++ H+F ITK  G + TG  ADAR+ VS+AR+EAA
Sbjct: 56  DKLIDASTVKHVFPITKGIGCVMTGSIADARAQVSRARSEAA 97



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>PSA1_TRYBB (Q9GU37) Proteasome subunit alpha type 1 (EC 3.4.25.1) (20SPA1)|
          Length = 266

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 18/42 (42%), Positives = 28/42 (66%)
 Frame = +3

Query: 3   DKLLDDTSITHLFSITKYTGLLATGLTADARSLVSQARNEAA 128
           DKL+   +IT L+++   TG+  TG   D ++LV +ARNEA+
Sbjct: 55  DKLMRPETITSLYNVNDNTGVCITGRAPDGKALVQKARNEAS 96



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>PSA6_DROME (Q9XZJ4) Proteasome subunit alpha type 6 (EC 3.4.25.1) (20S|
           proteasome subunit alpha-1)
          Length = 244

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 21/42 (50%), Positives = 27/42 (64%)
 Frame = +3

Query: 3   DKLLDDTSITHLFSITKYTGLLATGLTADARSLVSQARNEAA 128
           +K +   ++THLF ITK  G   TG  AD+RS V +AR EAA
Sbjct: 58  EKNIVPETVTHLFRITKDIGCAMTGRIADSRSQVQKARYEAA 99



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>PSA6_YEAST (P21243) Proteasome component C7-alpha (EC 3.4.25.1) (Macropain|
           subunit C7-alpha) (Proteinase YSCE subunit 7)
           (Multicatalytic endopeptidase complex C7) (Component Y8)
           (SCL1 suppressor protein)
          Length = 252

 Score = 38.5 bits (88), Expect = 0.005
 Identities = 17/42 (40%), Positives = 29/42 (69%)
 Frame = +3

Query: 3   DKLLDDTSITHLFSITKYTGLLATGLTADARSLVSQARNEAA 128
           DKLLD T+++++F I++  G++  G   DAR+   +A+ EAA
Sbjct: 61  DKLLDPTTVSYIFCISRTIGMVVNGPIPDARNAALRAKAEAA 102



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>PSMA_METAC (Q8TPX5) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic|
           endopeptidase complex alpha subunit)
          Length = 247

 Score = 38.1 bits (87), Expect = 0.007
 Identities = 19/40 (47%), Positives = 27/40 (67%)
 Frame = +3

Query: 6   KLLDDTSITHLFSITKYTGLLATGLTADARSLVSQARNEA 125
           +L++  SI  +F I ++ G   +GL ADARSLV +AR EA
Sbjct: 56  RLVEAESIEKIFQIDEHIGAATSGLVADARSLVDRARVEA 95



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>PSA3_RAT (P18422) Proteasome subunit alpha type 3 (EC 3.4.25.1) (Proteasome|
           component C8) (Macropain subunit C8) (Multicatalytic
           endopeptidase complex subunit C8) (Proteasome subunit K)
          Length = 254

 Score = 37.7 bits (86), Expect = 0.009
 Identities = 18/41 (43%), Positives = 26/41 (63%)
 Frame = +3

Query: 6   KLLDDTSITHLFSITKYTGLLATGLTADARSLVSQARNEAA 128
           KL ++ S   LF++ ++ G+   GL ADARSL   AR EA+
Sbjct: 56  KLYEEGSNKRLFNVDRHVGMAVAGLLADARSLADIAREEAS 96



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>PSA3_MOUSE (O70435) Proteasome subunit alpha type 3 (EC 3.4.25.1) (Proteasome|
           component C8) (Macropain subunit C8) (Multicatalytic
           endopeptidase complex subunit C8) (Proteasome subunit K)
          Length = 254

 Score = 37.7 bits (86), Expect = 0.009
 Identities = 18/41 (43%), Positives = 26/41 (63%)
 Frame = +3

Query: 6   KLLDDTSITHLFSITKYTGLLATGLTADARSLVSQARNEAA 128
           KL ++ S   LF++ ++ G+   GL ADARSL   AR EA+
Sbjct: 56  KLYEEGSNKRLFNVDRHVGMAVAGLLADARSLADIAREEAS 96



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>PSA3_HUMAN (P25788) Proteasome subunit alpha type 3 (EC 3.4.25.1) (Proteasome|
           component C8) (Macropain subunit C8) (Multicatalytic
           endopeptidase complex subunit C8)
          Length = 254

 Score = 37.7 bits (86), Expect = 0.009
 Identities = 18/41 (43%), Positives = 26/41 (63%)
 Frame = +3

Query: 6   KLLDDTSITHLFSITKYTGLLATGLTADARSLVSQARNEAA 128
           KL ++ S   LF++ ++ G+   GL ADARSL   AR EA+
Sbjct: 56  KLYEEGSNKRLFNVDRHVGMAVAGLLADARSLADIAREEAS 96



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>PSMA_METMA (Q8PTU1) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic|
           endopeptidase complex alpha subunit)
          Length = 249

 Score = 37.4 bits (85), Expect = 0.012
 Identities = 19/40 (47%), Positives = 26/40 (65%)
 Frame = +3

Query: 6   KLLDDTSITHLFSITKYTGLLATGLTADARSLVSQARNEA 125
           +L++  SI  +F I  + G   +GL ADARSLV +AR EA
Sbjct: 58  RLVEAESIEKIFQIDDHIGAATSGLVADARSLVDRARVEA 97



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>PSA5_YEAST (P32379) Proteasome component PUP2 (EC 3.4.25.1) (Macropain subunit|
           PUP2) (Proteinase YSCE subunit PUP2) (Multicatalytic
           endopeptidase complex subunit PUP2)
          Length = 260

 Score = 35.8 bits (81), Expect = 0.034
 Identities = 17/39 (43%), Positives = 24/39 (61%)
 Frame = +3

Query: 9   LLDDTSITHLFSITKYTGLLATGLTADARSLVSQARNEA 125
           LL+  SI  +  I ++ G   +GLTADARS++  AR  A
Sbjct: 58  LLESDSIEKIVEIDRHIGCAMSGLTADARSMIEHARTAA 96



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>PSMA_METMP (Q6M0L9) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic|
           endopeptidase complex alpha subunit)
          Length = 259

 Score = 34.7 bits (78), Expect = 0.076
 Identities = 18/40 (45%), Positives = 25/40 (62%)
 Frame = +3

Query: 6   KLLDDTSITHLFSITKYTGLLATGLTADARSLVSQARNEA 125
           KL+D +SI  +F I  +     +GL ADAR L+ +AR EA
Sbjct: 59  KLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARIEA 98



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>PSA5_SCHPO (Q9UT97) Probable proteasome subunit alpha type 5 (EC 3.4.25.1)|
          Length = 247

 Score = 34.7 bits (78), Expect = 0.076
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = +3

Query: 9   LLDDTSITHLFSITKYTGLLATGLTADARSLVSQAR 116
           L++  S+  LF I  + G   +GLTADAR+++  AR
Sbjct: 58  LMESHSVEKLFEIDSHIGCAISGLTADARTIIEHAR 93



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>PSA5_ENTHI (Q94561) Proteasome subunit alpha type 5 (EC 3.4.25.1)|
          Length = 247

 Score = 33.5 bits (75), Expect = 0.17
 Identities = 17/39 (43%), Positives = 24/39 (61%)
 Frame = +3

Query: 9   LLDDTSITHLFSITKYTGLLATGLTADARSLVSQARNEA 125
           L+  +SI  +  I  + G   +GLTADAR+L+  AR EA
Sbjct: 58  LMLGSSIEKIIEIDDHIGAAVSGLTADARTLIDNARLEA 96



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>PSMA_ARCFU (O29760) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic|
           endopeptidase complex alpha subunit)
          Length = 246

 Score = 32.0 bits (71), Expect = 0.49
 Identities = 16/40 (40%), Positives = 25/40 (62%)
 Frame = +3

Query: 6   KLLDDTSITHLFSITKYTGLLATGLTADARSLVSQARNEA 125
           KLL+  +I  ++ I ++     +GL ADAR L+ +AR EA
Sbjct: 57  KLLEADTIEKIYKIDEHICAATSGLVADARVLIDRARIEA 96



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>PSMA_SULSO (Q9UXC6) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic|
           endopeptidase complex alpha subunit)
          Length = 241

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = +3

Query: 9   LLDDTSITHLFSITKYTGLLATGLTADARSLVSQARNEA 125
           LLD  SI  +F I  + G    GL +D R L+  ARN A
Sbjct: 60  LLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIA 98



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>PSA1_DICDI (Q27562) Proteasome subunit alpha type 1 (EC 3.4.25.1) (Proteasome|
           subunit C2)
          Length = 248

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +3

Query: 36  LFSITKYTGLLATGLTADARSLVSQARNEAA 128
           +F +  + G+  +GLTADAR L +  RNE +
Sbjct: 63  IFVVDDHVGIAISGLTADARMLCNYMRNECS 93



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>PSA7L_MOUSE (Q9CWH6) Proteasome subunit alpha type 7-like (EC 3.4.25.1)|
          Length = 250

 Score = 30.4 bits (67), Expect = 1.4
 Identities = 14/39 (35%), Positives = 25/39 (64%)
 Frame = +3

Query: 6   KLLDDTSITHLFSITKYTGLLATGLTADARSLVSQARNE 122
           KL D+ ++  + ++  +  +   GLTADAR ++S+AR E
Sbjct: 54  KLQDERTVRKICALDDHVCMAFAGLTADARVVISRARVE 92



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>PSA6_CAEEL (O17586) Proteasome subunit alpha type 6 (EC 3.4.25.1) (Proteasome|
           subunit alpha 1)
          Length = 246

 Score = 29.6 bits (65), Expect = 2.4
 Identities = 13/42 (30%), Positives = 25/42 (59%)
 Frame = +3

Query: 3   DKLLDDTSITHLFSITKYTGLLATGLTADARSLVSQARNEAA 128
           D L+   ++T ++ I++  G  A G+  DA+  + +A+ EAA
Sbjct: 58  DSLIVADTVTSVYQISQSVGCCAIGMIPDAKFQIKRAQGEAA 99



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>RNF31_HUMAN (Q96EP0) RING finger protein 31 (Zinc in-between-RING-finger|
           ubiquitin-associated domain protein)
          Length = 1072

 Score = 29.3 bits (64), Expect = 3.2
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = +1

Query: 28  SRTSSPLPSTPACLPPASQLMRGPWSP 108
           +RTSSP+P+  A  P AS L +GP  P
Sbjct: 433 NRTSSPIPAQHAPRPYASSLEKGPPKP 459



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>PSMA1_HALVO (Q9V2V6) Proteasome alpha-1 subunit (EC 3.4.25.1) (Multicatalytic|
           endopeptidase complex alpha-1 subunit)
          Length = 252

 Score = 28.9 bits (63), Expect = 4.1
 Identities = 12/39 (30%), Positives = 23/39 (58%)
 Frame = +3

Query: 9   LLDDTSITHLFSITKYTGLLATGLTADARSLVSQARNEA 125
           L++ TS+  +     + G+ + G  ADAR L+  AR+++
Sbjct: 60  LMEPTSVEKIHKADDHIGIASAGHVADARQLIDFARHQS 98



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>Z3H7B_HUMAN (Q9UGR2) Zinc finger CCCH-type domain-containing protein 7B|
           (Rotavirus 'X'-associated non-structural protein)
           (RoXaN)
          Length = 993

 Score = 28.9 bits (63), Expect = 4.1
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +1

Query: 22  PASRTSSPLPSTPACLPPASQLMRGPWSPKQEMKQ 126
           P S    P PS   C+P  + L++ P +   E KQ
Sbjct: 405 PPSGAQKPAPSPEPCMPNTALLIKNPLAATHEFKQ 439



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>PSA7_CARAU (Q9PTW9) Proteasome subunit alpha type 7 (EC 3.4.25.1) (Proteasome|
           subunit alpha 4)
          Length = 251

 Score = 28.5 bits (62), Expect = 5.4
 Identities = 12/39 (30%), Positives = 26/39 (66%)
 Frame = +3

Query: 6   KLLDDTSITHLFSITKYTGLLATGLTADARSLVSQARNE 122
           KL ++ ++  + ++ ++  +   GLTADAR ++++AR E
Sbjct: 54  KLQEERTVRKICALDEHVCMAFAGLTADARIVINRARVE 92



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>PSA4_YEAST (P23638) Proteasome component Y13 (EC 3.4.25.1) (Macropain subunit|
           Y13) (Proteinase YSCE subunit 13) (Multicatalytic
           endopeptidase complex subunit Y13)
          Length = 258

 Score = 28.5 bits (62), Expect = 5.4
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +3

Query: 9   LLDDTSITHLFSITKYTGLLATGLTADARSLVSQARNEA 125
           L  DTS   L+ +     +   GLTADA  L++ AR  A
Sbjct: 57  LEQDTSTEKLYKLNDKIAVAVAGLTADAEILINTARIHA 95



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>PSA7_DICDI (P34120) Proteasome subunit alpha type 7 (EC 3.4.25.1) (Proteasome|
           component DD5)
          Length = 250

 Score = 28.5 bits (62), Expect = 5.4
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = +3

Query: 6   KLLDDTSITHLFSITKYTGLLATGLTADARSLVSQARNE 122
           KL D  SI  +  +  +  L   GLTAD+R L+S+A  E
Sbjct: 55  KLQDARSIRKIVKLDDHICLTFAGLTADSRVLISKALME 93



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>PSA7A_XENLA (Q9PVY6) Proteasome subunit alpha type 7-A (EC 3.4.25.1)|
           (Proteasome subunit alpha 4-A)
          Length = 248

 Score = 28.5 bits (62), Expect = 5.4
 Identities = 13/39 (33%), Positives = 25/39 (64%)
 Frame = +3

Query: 6   KLLDDTSITHLFSITKYTGLLATGLTADARSLVSQARNE 122
           KL D+ ++  + ++ +   +   GLTADAR ++++AR E
Sbjct: 52  KLQDERTVRKICALDENVFMAFAGLTADARIVINRARVE 90



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>PSA73_DROVI (O16812) Proteasome subunit alpha type 7-1B (EC 3.4.25.1)|
           (Testis-specific proteasome 28 kDa subunit 1B)
          Length = 245

 Score = 28.5 bits (62), Expect = 5.4
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = +3

Query: 3   DKLLDDTSITHLFSITKYTGLLATGLTADARSLVSQARNEA 125
           D L  + +   +  I ++  +   GLTADAR LVS+A+ EA
Sbjct: 50  DSLQIERTSRKIKKIDQHMAMTFAGLTADARVLVSRAQVEA 90



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>PSA7B_XENLA (Q9PVQ1) Proteasome subunit alpha type 7-B (EC 3.4.25.1)|
           (Proteasome subunit alpha 4-B)
          Length = 247

 Score = 28.5 bits (62), Expect = 5.4
 Identities = 13/39 (33%), Positives = 25/39 (64%)
 Frame = +3

Query: 6   KLLDDTSITHLFSITKYTGLLATGLTADARSLVSQARNE 122
           KL D+ ++  + ++ +   +   GLTADAR ++++AR E
Sbjct: 52  KLQDERTVRKICALDENVFMAFAGLTADARIVINRARVE 90



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>PSA7_CHICK (O13268) Proteasome subunit alpha type 7 (EC 3.4.25.1) (GPRO-28)|
          Length = 249

 Score = 27.7 bits (60), Expect = 9.2
 Identities = 13/39 (33%), Positives = 24/39 (61%)
 Frame = +3

Query: 6   KLLDDTSITHLFSITKYTGLLATGLTADARSLVSQARNE 122
           KL D+ ++  + ++     +   GLTADAR ++++AR E
Sbjct: 52  KLQDERTVRKICALDDNVCMAFAGLTADARIVINRARVE 90



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>PSA73_DROME (Q27575) Proteasome subunit alpha type 7-1B (EC 3.4.25.1)|
           (Testis-specific proteasome 28 kDa subunit 1B)
           (Testis-specific alpha4-t2 proteasome subunit)
          Length = 252

 Score = 27.7 bits (60), Expect = 9.2
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = +3

Query: 9   LLDDTSITHLFSITKYTGLLATGLTADARSLVSQARNEA 125
           L ++  +  +  +  +  +  +GLTADAR LVS+A+ EA
Sbjct: 55  LQEERMVRKICMLDDHVVMTFSGLTADARILVSRAQMEA 93



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>PSA7_MOUSE (Q9Z2U0) Proteasome subunit alpha type 7 (EC 3.4.25.1) (Proteasome|
           subunit RC6-1)
          Length = 248

 Score = 27.7 bits (60), Expect = 9.2
 Identities = 13/39 (33%), Positives = 24/39 (61%)
 Frame = +3

Query: 6   KLLDDTSITHLFSITKYTGLLATGLTADARSLVSQARNE 122
           KL D+ ++  + ++     +   GLTADAR ++++AR E
Sbjct: 52  KLQDERTVRKICALDDNVCMAFAGLTADARIVINRARVE 90



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>PSA7_HUMAN (O14818) Proteasome subunit alpha type 7 (EC 3.4.25.1) (Proteasome|
           subunit RC6-1) (Proteasome subunit XAPC7)
          Length = 248

 Score = 27.7 bits (60), Expect = 9.2
 Identities = 13/39 (33%), Positives = 24/39 (61%)
 Frame = +3

Query: 6   KLLDDTSITHLFSITKYTGLLATGLTADARSLVSQARNE 122
           KL D+ ++  + ++     +   GLTADAR ++++AR E
Sbjct: 52  KLQDERTVRKICALDDNVCMAFAGLTADARIVINRARVE 90


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.313    0.123    0.417 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,456,909
Number of Sequences: 219361
Number of extensions: 284692
Number of successful extensions: 1309
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1213
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1308
length of database: 80,573,946
effective HSP length: 18
effective length of database: 76,625,448
effective search space used: 1839010752
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
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