ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd20d12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_469697.1| Oryza sativa (japonica cultivar-group), mRNA 198 4e-48
2dbj|AB110189.1| Oryza sativa (japonica cultivar-group) mRNA for ... 198 4e-48
3dbj|AK065730.1| Oryza sativa (japonica cultivar-group) cDNA clon... 198 4e-48
4dbj|AK060366.1| Oryza sativa (japonica cultivar-group) cDNA clon... 198 4e-48
5gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 165 5e-38
6gb|AC092558.4| Oryza sativa chromosome 3 BAC OSJNBb0036F07 genom... 165 5e-38
7dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 165 5e-38
8gb|AY105257.1| Zea mays PCO119343 mRNA sequence 139 3e-30
9gb|BT019109.1| Zea mays clone Contig714.F mRNA sequence 56 3e-05
10gb|BT024180.1| Zea mays clone EL01N0417H11 mRNA sequence 56 3e-05
11emb|AL606456.2|OSJN00017 Oryza sativa genomic DNA, chromosome 4,... 52 5e-04
12dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 52 5e-04
13dbj|AK121152.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 5e-04
14dbj|AK120508.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 5e-04
15dbj|AK119666.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 5e-04
16dbj|AK106133.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 5e-04
17dbj|AK104376.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 5e-04
18dbj|AK104249.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 5e-04
19dbj|AK099975.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 5e-04
20dbj|AK099653.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 5e-04
21dbj|AK099368.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 5e-04
22dbj|AK099087.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 5e-04
23dbj|AK099009.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 5e-04
24dbj|AK068608.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 5e-04
25dbj|AK065314.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 5e-04
26emb|AL732353.1| Oryza sativa genomic DNA, chromosome 4, BAC clon... 52 5e-04
27gb|AC161516.9| Mus musculus chromosome 5, clone RP23-130C18, com... 40 2.0
28dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.0
29dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.0
30gb|AC009364.9| Homo sapiens chromosome 7 clone RP11-348A15, comp... 40 2.0
31gb|AC134230.2| Oryza sativa (japonica cultivar-group) chromosome... 40 2.0
32gb|AC018643.3|AC018643 Human Chromosome 7 clone RP11-297N5, comp... 40 2.0
33dbj|AP003516.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.0
34gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 2.0
35emb|AL928744.3|CNS08CBH Oryza sativa chromosome 12, . BAC OSJNBa... 40 2.0
36emb|AL731787.3|CNS08C8B Oryza sativa chromosome 12, . BAC OSJNBb... 40 2.0
37ref|XM_480164.1| Oryza sativa (japonica cultivar-group), mRNA 38 7.9
38ref|XM_526736.1| PREDICTED: Pan troglodytes a disintegrin and me... 38 7.9
39gb|AC166903.2| Mus musculus BAC clone RP24-163K10 from chromosom... 38 7.9
40emb|AL513122.7| Human DNA sequence from clone RP11-477J21 on chr... 38 7.9
41ref|XM_963912.1| PREDICTED: Tribolium castaneum similar to HECT,... 38 7.9
42emb|X07463.1|TLACT Thermomyces lanuginosus actin gene 38 7.9
43gb|AF378563.1|AF378563 Ophiostoma ulmi actin gene, partial cds 38 7.9
44gb|AF378562.1|AF378562 Ophiostoma novo-ulmi actin gene, partial cds 38 7.9
45dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 38 7.9
46gb|AF241575.1|AF241575 Streptomyces griseus PbpA gene, complete cds 38 7.9
47gb|AC087612.6| Homo sapiens chromosome 15, clone RP11-69G7, comp... 38 7.9
48ref|XM_238988.3| PREDICTED: Rattus norvegicus similar to Muc5b p... 38 7.9
49dbj|AP003905.3| Oryza sativa (japonica cultivar-group) genomic D... 38 7.9
50dbj|AK062907.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 7.9
51gb|AE001825.1| Deinococcus radiodurans R1 chromosome 2, complete... 38 7.9
52gb|AC087899.40| Mus musculus strain C57BL/6J chromosome 19 clone... 38 7.9
53gb|AC169037.4| Mus musculus BAC clone RP23-85E20 from chromosome... 38 7.9
54emb|AL928712.8| Zebrafish DNA sequence from clone CH211-220O11 i... 38 7.9 
>ref|XM_469697.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1307

 Score =  198 bits (100), Expect = 4e-48
 Identities = 147/163 (90%)
 Strand = Plus / Plus

                                                                       
Query: 2   tgcggaaactcattcgcgccattccccaaaggctgcttntacaccacatctggagggctg 61
           ||||| ||||| || ||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 787 tgcgggaactcgtttgcgccattccccaaaggctgcttctacaccacctctggagggctg 846

                                                                       
Query: 62  cagagcttcgagcatccgctgaacgaactgaaggccgtgccacgcgtggacagccaaggc 121
           |||||||||||||| ||||||||||| |||||| | ||||| || || |||||||| |||
Sbjct: 847 cagagcttcgagcacccgctgaacgagctgaagcctgtgccgcgggtcgacagccagggc 906

                                                      
Query: 122 cagatgtgtggctccaccttcaaggtcgacagcgaggccaaga 164
           |||||||| ||||||| || |||||||||||||||||||||||
Sbjct: 907 cagatgtgcggctccaactacaaggtcgacagcgaggccaaga 949
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>dbj|AB110189.1| Oryza sativa (japonica cultivar-group) mRNA for hypothetical
           protein, complete cds, clone: 17FPG011
          Length = 1129

 Score =  198 bits (100), Expect = 4e-48
 Identities = 147/163 (90%)
 Strand = Plus / Plus

                                                                       
Query: 2   tgcggaaactcattcgcgccattccccaaaggctgcttntacaccacatctggagggctg 61
           ||||| ||||| || ||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 606 tgcgggaactcgtttgcgccattccccaaaggctgcttctacaccacctctggagggctg 665

                                                                       
Query: 62  cagagcttcgagcatccgctgaacgaactgaaggccgtgccacgcgtggacagccaaggc 121
           |||||||||||||| ||||||||||| |||||| | ||||| || || |||||||| |||
Sbjct: 666 cagagcttcgagcacccgctgaacgagctgaagcctgtgccgcgggtcgacagccagggc 725

                                                      
Query: 122 cagatgtgtggctccaccttcaaggtcgacagcgaggccaaga 164
           |||||||| ||||||| || |||||||||||||||||||||||
Sbjct: 726 cagatgtgcggctccaactacaaggtcgacagcgaggccaaga 768
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>dbj|AK065730.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013037C05, full
           insert sequence
          Length = 1111

 Score =  198 bits (100), Expect = 4e-48
 Identities = 147/163 (90%)
 Strand = Plus / Plus

                                                                       
Query: 2   tgcggaaactcattcgcgccattccccaaaggctgcttntacaccacatctggagggctg 61
           ||||| ||||| || ||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 609 tgcgggaactcgtttgcgccattccccaaaggctgcttctacaccacctctggagggctg 668

                                                                       
Query: 62  cagagcttcgagcatccgctgaacgaactgaaggccgtgccacgcgtggacagccaaggc 121
           |||||||||||||| ||||||||||| |||||| | ||||| || || |||||||| |||
Sbjct: 669 cagagcttcgagcacccgctgaacgagctgaagcctgtgccgcgggtcgacagccagggc 728

                                                      
Query: 122 cagatgtgtggctccaccttcaaggtcgacagcgaggccaaga 164
           |||||||| ||||||| || |||||||||||||||||||||||
Sbjct: 729 cagatgtgcggctccaactacaaggtcgacagcgaggccaaga 771
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>dbj|AK060366.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-A05, full
            insert sequence
          Length = 1394

 Score =  198 bits (100), Expect = 4e-48
 Identities = 147/163 (90%)
 Strand = Plus / Plus

                                                                        
Query: 2    tgcggaaactcattcgcgccattccccaaaggctgcttntacaccacatctggagggctg 61
            ||||| ||||| || ||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 890  tgcgggaactcgtttgcgccattccccaaaggctgcttctacaccacctctggagggctg 949

                                                                        
Query: 62   cagagcttcgagcatccgctgaacgaactgaaggccgtgccacgcgtggacagccaaggc 121
            |||||||||||||| ||||||||||| |||||| | ||||| || || |||||||| |||
Sbjct: 950  cagagcttcgagcacccgctgaacgagctgaagcctgtgccgcgggtcgacagccagggc 1009

                                                       
Query: 122  cagatgtgtggctccaccttcaaggtcgacagcgaggccaaga 164
            |||||||| ||||||| || |||||||||||||||||||||||
Sbjct: 1010 cagatgtgcggctccaactacaaggtcgacagcgaggccaaga 1052
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  165 bits (83), Expect = 5e-38
 Identities = 121/134 (90%)
 Strand = Plus / Minus

                                                                            
Query: 31       aggctgcttntacaccacatctggagggctgcagagcttcgagcatccgctgaacgaact 90
                ||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 30268834 aggctgcttctacaccacctctggagggctgcagagcttcgagcacccgctgaacgagct 30268775

                                                                            
Query: 91       gaaggccgtgccacgcgtggacagccaaggccagatgtgtggctccaccttcaaggtcga 150
                |||| | ||||| || || |||||||| ||||||||||| ||||||| || |||||||||
Sbjct: 30268774 gaagcctgtgccgcgggtcgacagccagggccagatgtgcggctccaactacaaggtcga 30268715

                              
Query: 151      cagcgaggccaaga 164
                ||||||||||||||
Sbjct: 30268714 cagcgaggccaaga 30268701



 Score = 40.1 bits (20), Expect = 2.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 2        tgcggaaactcattcgcgccattccccaaagg 33
                ||||| ||||| || |||||||||||||||||
Sbjct: 30268972 tgcgggaactcgtttgcgccattccccaaagg 30268941



 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 87       aactgaaggccgtgccacgc 106
                ||||||||||||||||||||
Sbjct: 11394135 aactgaaggccgtgccacgc 11394154
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>gb|AC092558.4| Oryza sativa chromosome 3 BAC OSJNBb0036F07 genomic sequence, complete
             sequence
          Length = 130359

 Score =  165 bits (83), Expect = 5e-38
 Identities = 121/134 (90%)
 Strand = Plus / Minus

                                                                         
Query: 31    aggctgcttntacaccacatctggagggctgcagagcttcgagcatccgctgaacgaact 90
             ||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 60514 aggctgcttctacaccacctctggagggctgcagagcttcgagcacccgctgaacgagct 60455

                                                                         
Query: 91    gaaggccgtgccacgcgtggacagccaaggccagatgtgtggctccaccttcaaggtcga 150
             |||| | ||||| || || |||||||| ||||||||||| ||||||| || |||||||||
Sbjct: 60454 gaagcctgtgccgcgggtcgacagccagggccagatgtgcggctccaactacaaggtcga 60395

                           
Query: 151   cagcgaggccaaga 164
             ||||||||||||||
Sbjct: 60394 cagcgaggccaaga 60381



 Score = 40.1 bits (20), Expect = 2.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 2     tgcggaaactcattcgcgccattccccaaagg 33
             ||||| ||||| || |||||||||||||||||
Sbjct: 60652 tgcgggaactcgtttgcgccattccccaaagg 60621
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  165 bits (83), Expect = 5e-38
 Identities = 121/134 (90%)
 Strand = Plus / Minus

                                                                            
Query: 31       aggctgcttntacaccacatctggagggctgcagagcttcgagcatccgctgaacgaact 90
                ||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 30360256 aggctgcttctacaccacctctggagggctgcagagcttcgagcacccgctgaacgagct 30360197

                                                                            
Query: 91       gaaggccgtgccacgcgtggacagccaaggccagatgtgtggctccaccttcaaggtcga 150
                |||| | ||||| || || |||||||| ||||||||||| ||||||| || |||||||||
Sbjct: 30360196 gaagcctgtgccgcgggtcgacagccagggccagatgtgcggctccaactacaaggtcga 30360137

                              
Query: 151      cagcgaggccaaga 164
                ||||||||||||||
Sbjct: 30360136 cagcgaggccaaga 30360123



 Score = 40.1 bits (20), Expect = 2.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 2        tgcggaaactcattcgcgccattccccaaagg 33
                ||||| ||||| || |||||||||||||||||
Sbjct: 30360394 tgcgggaactcgtttgcgccattccccaaagg 30360363



 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 87       aactgaaggccgtgccacgc 106
                ||||||||||||||||||||
Sbjct: 11390898 aactgaaggccgtgccacgc 11390917
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>gb|AY105257.1| Zea mays PCO119343 mRNA sequence
          Length = 1188

 Score =  139 bits (70), Expect = 3e-30
 Identities = 136/157 (86%), Gaps = 1/157 (0%)
 Strand = Plus / Plus

                                                                       
Query: 2   tgcggaaactcattcgcgccattccccaaaggctgcttntacaccacatctggaggg-ct 60
           ||||| ||||| | ||| ||||| || ||||| ||||| |||||||| || || ||| ||
Sbjct: 665 tgcggcaactcgtacgctccatttcctaaaggttgcttctacaccacctccggtggggct 724

                                                                       
Query: 61  gcagagcttcgagcatccgctgaacgaactgaaggccgtgccacgcgtggacagccaagg 120
           ||||||||||||||| ||| || ||||  | ||||| |||||||||||||||||||||||
Sbjct: 725 gcagagcttcgagcacccgttgcacgaggtcaaggcggtgccacgcgtggacagccaagg 784

                                                
Query: 121 ccagatgtgtggctccaccttcaaggtcgacagcgag 157
           ||||||||| ||||||| |||||||||||||||||||
Sbjct: 785 ccagatgtgcggctccatcttcaaggtcgacagcgag 821
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>gb|BT019109.1| Zea mays clone Contig714.F mRNA sequence
          Length = 486

 Score = 56.0 bits (28), Expect = 3e-05
 Identities = 82/100 (82%)
 Strand = Plus / Plus

                                                                       
Query: 53  ggagggctgcagagcttcgagcatccgctgaacgaactgaaggccgtgccacgcgtggac 112
           ||||||||  ||||||||||||| ||  |||||   || |||||| |||| ||||| |||
Sbjct: 15  ggagggctcaagagcttcgagcaccccatgaacaggctcaaggccatgccgcgcgtcgac 74

                                                   
Query: 113 agccaaggccagatgtgtggctccaccttcaaggtcgaca 152
           ||| |||||   ||||| ||| ||||||||||||||||||
Sbjct: 75  agcgaaggcgccatgtgcggcgccaccttcaaggtcgaca 114
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>gb|BT024180.1| Zea mays clone EL01N0417H11 mRNA sequence
          Length = 1180

 Score = 56.0 bits (28), Expect = 3e-05
 Identities = 82/100 (82%)
 Strand = Plus / Plus

                                                                       
Query: 53  ggagggctgcagagcttcgagcatccgctgaacgaactgaaggccgtgccacgcgtggac 112
           ||||||||  ||||||||||||| ||  |||||   || |||||| |||| ||||| |||
Sbjct: 704 ggagggctcaagagcttcgagcaccccatgaacaggctcaaggccatgccgcgcgtcgac 763

                                                   
Query: 113 agccaaggccagatgtgtggctccaccttcaaggtcgaca 152
           ||| |||||   ||||| ||| ||||||||||||||||||
Sbjct: 764 agcgaaggcgccatgtgcggcgccaccttcaaggtcgaca 803
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>emb|AL606456.2|OSJN00017 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0017I01,
             complete sequence
          Length = 133331

 Score = 52.0 bits (26), Expect = 5e-04
 Identities = 74/90 (82%)
 Strand = Plus / Minus

                                                                         
Query: 63    agagcttcgagcatccgctgaacgaactgaaggccgtgccacgcgtggacagccaaggcc 122
             ||||||||||||| ||| |||||   ||||||||  |||| || ||||||||| | ||| 
Sbjct: 35584 agagcttcgagcacccgatgaaccggctgaaggcgatgccgcgggtggacagcgagggcg 35525

                                           
Query: 123   agatgtgtggctccaccttcaaggtcgaca 152
               ||||| ||| ||||||||||||||||||
Sbjct: 35524 tcatgtgcggcgccaccttcaaggtcgaca 35495
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 52.0 bits (26), Expect = 5e-04
 Identities = 74/90 (82%)
 Strand = Plus / Minus

                                                                            
Query: 63       agagcttcgagcatccgctgaacgaactgaaggccgtgccacgcgtggacagccaaggcc 122
                ||||||||||||| ||| |||||   ||||||||  |||| || ||||||||| | ||| 
Sbjct: 34730022 agagcttcgagcacccgatgaaccggctgaaggcgatgccgcgggtggacagcgagggcg 34729963

                                              
Query: 123      agatgtgtggctccaccttcaaggtcgaca 152
                  ||||| ||| ||||||||||||||||||
Sbjct: 34729962 tcatgtgcggcgccaccttcaaggtcgaca 34729933
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>dbj|AK121152.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078J16, full
           insert sequence
          Length = 1418

 Score = 52.0 bits (26), Expect = 5e-04
 Identities = 74/90 (82%)
 Strand = Plus / Plus

                                                                       
Query: 63  agagcttcgagcatccgctgaacgaactgaaggccgtgccacgcgtggacagccaaggcc 122
           ||||||||||||| ||| |||||   ||||||||  |||| || ||||||||| | ||| 
Sbjct: 901 agagcttcgagcacccgatgaaccggctgaaggcgatgccgcgggtggacagcgagggcg 960

                                         
Query: 123 agatgtgtggctccaccttcaaggtcgaca 152
             ||||| ||| ||||||||||||||||||
Sbjct: 961 tcatgtgcggcgccaccttcaaggtcgaca 990
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>dbj|AK120508.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123H02, full
           insert sequence
          Length = 644

 Score = 52.0 bits (26), Expect = 5e-04
 Identities = 74/90 (82%)
 Strand = Plus / Plus

                                                                       
Query: 63  agagcttcgagcatccgctgaacgaactgaaggccgtgccacgcgtggacagccaaggcc 122
           ||||||||||||| ||| |||||   ||||||||  |||| || ||||||||| | ||| 
Sbjct: 135 agagcttcgagcacccgatgaaccggctgaaggcgatgccgcgggtggacagcgagggcg 194

                                         
Query: 123 agatgtgtggctccaccttcaaggtcgaca 152
             ||||| ||| ||||||||||||||||||
Sbjct: 195 tcatgtgcggcgccaccttcaaggtcgaca 224
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>dbj|AK119666.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-144-D04, full
           insert sequence
          Length = 1278

 Score = 52.0 bits (26), Expect = 5e-04
 Identities = 74/90 (82%)
 Strand = Plus / Plus

                                                                       
Query: 63  agagcttcgagcatccgctgaacgaactgaaggccgtgccacgcgtggacagccaaggcc 122
           ||||||||||||| ||| |||||   ||||||||  |||| || ||||||||| | ||| 
Sbjct: 761 agagcttcgagcacccgatgaaccggctgaaggcgatgccgcgggtggacagcgagggcg 820

                                         
Query: 123 agatgtgtggctccaccttcaaggtcgaca 152
             ||||| ||| ||||||||||||||||||
Sbjct: 821 tcatgtgcggcgccaccttcaaggtcgaca 850
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>dbj|AK106133.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-G01, full
           insert sequence
          Length = 1279

 Score = 52.0 bits (26), Expect = 5e-04
 Identities = 74/90 (82%)
 Strand = Plus / Plus

                                                                       
Query: 63  agagcttcgagcatccgctgaacgaactgaaggccgtgccacgcgtggacagccaaggcc 122
           ||||||||||||| ||| |||||   ||||||||  |||| || ||||||||| | ||| 
Sbjct: 766 agagcttcgagcacccgatgaaccggctgaaggcgatgccgcgggtggacagcgagggcg 825

                                         
Query: 123 agatgtgtggctccaccttcaaggtcgaca 152
             ||||| ||| ||||||||||||||||||
Sbjct: 826 tcatgtgcggcgccaccttcaaggtcgaca 855
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>dbj|AK104376.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-G05, full
           insert sequence
          Length = 1279

 Score = 52.0 bits (26), Expect = 5e-04
 Identities = 74/90 (82%)
 Strand = Plus / Plus

                                                                       
Query: 63  agagcttcgagcatccgctgaacgaactgaaggccgtgccacgcgtggacagccaaggcc 122
           ||||||||||||| ||| |||||   ||||||||  |||| || ||||||||| | ||| 
Sbjct: 766 agagcttcgagcacccgatgaaccggctgaaggcgatgccgcgggtggacagcgagggcg 825

                                         
Query: 123 agatgtgtggctccaccttcaaggtcgaca 152
             ||||| ||| ||||||||||||||||||
Sbjct: 826 tcatgtgcggcgccaccttcaaggtcgaca 855
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>dbj|AK104249.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-G04, full
           insert sequence
          Length = 1283

 Score = 52.0 bits (26), Expect = 5e-04
 Identities = 74/90 (82%)
 Strand = Plus / Plus

                                                                       
Query: 63  agagcttcgagcatccgctgaacgaactgaaggccgtgccacgcgtggacagccaaggcc 122
           ||||||||||||| ||| |||||   ||||||||  |||| || ||||||||| | ||| 
Sbjct: 766 agagcttcgagcacccgatgaaccggctgaaggcgatgccgcgggtggacagcgagggcg 825

                                         
Query: 123 agatgtgtggctccaccttcaaggtcgaca 152
             ||||| ||| ||||||||||||||||||
Sbjct: 826 tcatgtgcggcgccaccttcaaggtcgaca 855
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>dbj|AK099975.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128E09, full
           insert sequence
          Length = 1281

 Score = 52.0 bits (26), Expect = 5e-04
 Identities = 74/90 (82%)
 Strand = Plus / Plus

                                                                       
Query: 63  agagcttcgagcatccgctgaacgaactgaaggccgtgccacgcgtggacagccaaggcc 122
           ||||||||||||| ||| |||||   ||||||||  |||| || ||||||||| | ||| 
Sbjct: 767 agagcttcgagcacccgatgaaccggctgaaggcgatgccgcgggtggacagcgagggcg 826

                                         
Query: 123 agatgtgtggctccaccttcaaggtcgaca 152
             ||||| ||| ||||||||||||||||||
Sbjct: 827 tcatgtgcggcgccaccttcaaggtcgaca 856
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>dbj|AK099653.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013065M12, full
           insert sequence
          Length = 1284

 Score = 52.0 bits (26), Expect = 5e-04
 Identities = 74/90 (82%)
 Strand = Plus / Plus

                                                                       
Query: 63  agagcttcgagcatccgctgaacgaactgaaggccgtgccacgcgtggacagccaaggcc 122
           ||||||||||||| ||| |||||   ||||||||  |||| || ||||||||| | ||| 
Sbjct: 767 agagcttcgagcacccgatgaaccggctgaaggcgatgccgcgggtggacagcgagggcg 826

                                         
Query: 123 agatgtgtggctccaccttcaaggtcgaca 152
             ||||| ||| ||||||||||||||||||
Sbjct: 827 tcatgtgcggcgccaccttcaaggtcgaca 856
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>dbj|AK099368.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033052O07, full
           insert sequence
          Length = 1284

 Score = 52.0 bits (26), Expect = 5e-04
 Identities = 74/90 (82%)
 Strand = Plus / Plus

                                                                       
Query: 63  agagcttcgagcatccgctgaacgaactgaaggccgtgccacgcgtggacagccaaggcc 122
           ||||||||||||| ||| |||||   ||||||||  |||| || ||||||||| | ||| 
Sbjct: 767 agagcttcgagcacccgatgaaccggctgaaggcgatgccgcgggtggacagcgagggcg 826

                                         
Query: 123 agatgtgtggctccaccttcaaggtcgaca 152
             ||||| ||| ||||||||||||||||||
Sbjct: 827 tcatgtgcggcgccaccttcaaggtcgaca 856
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>dbj|AK099087.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023006D09, full
           insert sequence
          Length = 1275

 Score = 52.0 bits (26), Expect = 5e-04
 Identities = 74/90 (82%)
 Strand = Plus / Plus

                                                                       
Query: 63  agagcttcgagcatccgctgaacgaactgaaggccgtgccacgcgtggacagccaaggcc 122
           ||||||||||||| ||| |||||   ||||||||  |||| || ||||||||| | ||| 
Sbjct: 762 agagcttcgagcacccgatgaaccggctgaaggcgatgccgcgggtggacagcgagggcg 821

                                         
Query: 123 agatgtgtggctccaccttcaaggtcgaca 152
             ||||| ||| ||||||||||||||||||
Sbjct: 822 tcatgtgcggcgccaccttcaaggtcgaca 851
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>dbj|AK099009.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116G09, full
           insert sequence
          Length = 1284

 Score = 52.0 bits (26), Expect = 5e-04
 Identities = 74/90 (82%)
 Strand = Plus / Plus

                                                                       
Query: 63  agagcttcgagcatccgctgaacgaactgaaggccgtgccacgcgtggacagccaaggcc 122
           ||||||||||||| ||| |||||   ||||||||  |||| || ||||||||| | ||| 
Sbjct: 767 agagcttcgagcacccgatgaaccggctgaaggcgatgccgcgggtggacagcgagggcg 826

                                         
Query: 123 agatgtgtggctccaccttcaaggtcgaca 152
             ||||| ||| ||||||||||||||||||
Sbjct: 827 tcatgtgcggcgccaccttcaaggtcgaca 856
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>dbj|AK068608.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013157B10, full
            insert sequence
          Length = 1500

 Score = 52.0 bits (26), Expect = 5e-04
 Identities = 74/90 (82%)
 Strand = Plus / Plus

                                                                        
Query: 63   agagcttcgagcatccgctgaacgaactgaaggccgtgccacgcgtggacagccaaggcc 122
            ||||||||||||| ||| |||||   ||||||||  |||| || ||||||||| | ||| 
Sbjct: 978  agagcttcgagcacccgatgaaccggctgaaggcgatgccgcgggtggacagcgagggcg 1037

                                          
Query: 123  agatgtgtggctccaccttcaaggtcgaca 152
              ||||| ||| ||||||||||||||||||
Sbjct: 1038 tcatgtgcggcgccaccttcaaggtcgaca 1067
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>dbj|AK065314.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002O24, full
           insert sequence
          Length = 1284

 Score = 52.0 bits (26), Expect = 5e-04
 Identities = 74/90 (82%)
 Strand = Plus / Plus

                                                                       
Query: 63  agagcttcgagcatccgctgaacgaactgaaggccgtgccacgcgtggacagccaaggcc 122
           ||||||||||||| ||| |||||   ||||||||  |||| || ||||||||| | ||| 
Sbjct: 767 agagcttcgagcacccgatgaaccggctgaaggcgatgccgcgggtggacagcgagggcg 826

                                         
Query: 123 agatgtgtggctccaccttcaaggtcgaca 152
             ||||| ||| ||||||||||||||||||
Sbjct: 827 tcatgtgcggcgccaccttcaaggtcgaca 856
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>emb|AL732353.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0801D08, complete
             sequence
          Length = 103264

 Score = 52.0 bits (26), Expect = 5e-04
 Identities = 74/90 (82%)
 Strand = Plus / Minus

                                                                         
Query: 63    agagcttcgagcatccgctgaacgaactgaaggccgtgccacgcgtggacagccaaggcc 122
             ||||||||||||| ||| |||||   ||||||||  |||| || ||||||||| | ||| 
Sbjct: 72548 agagcttcgagcacccgatgaaccggctgaaggcgatgccgcgggtggacagcgagggcg 72489

                                           
Query: 123   agatgtgtggctccaccttcaaggtcgaca 152
               ||||| ||| ||||||||||||||||||
Sbjct: 72488 tcatgtgcggcgccaccttcaaggtcgaca 72459
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>gb|AC161516.9| Mus musculus chromosome 5, clone RP23-130C18, complete sequence
          Length = 226006

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 111    acagccaaggccagatgtgt 130
              ||||||||||||||||||||
Sbjct: 120439 acagccaaggccagatgtgt 120458
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 87       aactgaaggccgtgccacgc 106
                ||||||||||||||||||||
Sbjct: 17858124 aactgaaggccgtgccacgc 17858105
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 87       aactgaaggccgtgccacgc 106
                ||||||||||||||||||||
Sbjct: 19895547 aactgaaggccgtgccacgc 19895566
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>gb|AC009364.9| Homo sapiens chromosome 7 clone RP11-348A15, complete sequence
          Length = 151153

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 44    accacatctggagggctgca 63
             ||||||||||||||||||||
Sbjct: 16076 accacatctggagggctgca 16057
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>gb|AC134230.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0005J15,
              complete sequence
          Length = 159270

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 87     aactgaaggccgtgccacgc 106
              ||||||||||||||||||||
Sbjct: 102432 aactgaaggccgtgccacgc 102451
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>gb|AC018643.3|AC018643 Human Chromosome 7 clone RP11-297N5, complete sequence
          Length = 198470

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 44     accacatctggagggctgca 63
              ||||||||||||||||||||
Sbjct: 150177 accacatctggagggctgca 150158
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>dbj|AP003516.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0047D12
          Length = 145981

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 87     aactgaaggccgtgccacgc 106
              ||||||||||||||||||||
Sbjct: 118505 aactgaaggccgtgccacgc 118524
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 87       aactgaaggccgtgccacgc 106
                ||||||||||||||||||||
Sbjct: 17784493 aactgaaggccgtgccacgc 17784474
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>emb|AL928744.3|CNS08CBH Oryza sativa chromosome 12, . BAC OSJNBa0041B10 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 147543

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 87     aactgaaggccgtgccacgc 106
              ||||||||||||||||||||
Sbjct: 140382 aactgaaggccgtgccacgc 140401
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>emb|AL731787.3|CNS08C8B Oryza sativa chromosome 12, . BAC OSJNBb0014C10 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 142246

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 87    aactgaaggccgtgccacgc 106
             ||||||||||||||||||||
Sbjct: 77322 aactgaaggccgtgccacgc 77303
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>ref|XM_480164.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 757

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 41  tacaccacatctggagggc 59
           |||||||||||||||||||
Sbjct: 284 tacaccacatctggagggc 302
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>ref|XM_526736.1| PREDICTED: Pan troglodytes a disintegrin and metalloproteinase
           domain 29 (LOC471354), mRNA
          Length = 3411

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 43  caccacatctggagggctg 61
           |||||||||||||||||||
Sbjct: 102 caccacatctggagggctg 84
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>gb|AC166903.2| Mus musculus BAC clone RP24-163K10 from chromosome 16, complete sequence
          Length = 184060

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 116    caaggccagatgtgtggct 134
              |||||||||||||||||||
Sbjct: 137305 caaggccagatgtgtggct 137287
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>emb|AL513122.7| Human DNA sequence from clone RP11-477J21 on chromosome 9 Contains the
             3' end of a novel gene, a ATPase, H+ transporting,
             lysosomal 56/58kDa, V1 subunit B, isoform 2 (HO57, VATB,
             VPP3, Vma2, ATP6B2, ATP6B1B2 (ATP6V1B2)  pseudogene, the
             GSN gene for gelsolin (amyloidosis, Finnish type), a novel
             gene (MOST2), a novel gene and two CpG islands, complete
             sequence
          Length = 108930

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 107   gtggacagccaaggccaga 125
             |||||||||||||||||||
Sbjct: 90742 gtggacagccaaggccaga 90724
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>ref|XM_963912.1| PREDICTED: Tribolium castaneum similar to HECT, UBA and WWE domain
            containing 1 (LOC657452), mRNA
          Length = 12301

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 52   tggagggctgcagagcttc 70
            |||||||||||||||||||
Sbjct: 1353 tggagggctgcagagcttc 1371
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>emb|X07463.1|TLACT Thermomyces lanuginosus actin gene
          Length = 2391

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 143  aaggtcgacagcgaggcca 161
            |||||||||||||||||||
Sbjct: 2233 aaggtcgacagcgaggcca 2215
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>gb|AF378563.1|AF378563 Ophiostoma ulmi actin gene, partial cds
          Length = 821

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 143 aaggtcgacagcgaggcca 161
           |||||||||||||||||||
Sbjct: 790 aaggtcgacagcgaggcca 772
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>gb|AF378562.1|AF378562 Ophiostoma novo-ulmi actin gene, partial cds
          Length = 821

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 143 aaggtcgacagcgaggcca 161
           |||||||||||||||||||
Sbjct: 790 aaggtcgacagcgaggcca 772
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 41      tacaccacatctggagggc 59
               |||||||||||||||||||
Sbjct: 3218937 tacaccacatctggagggc 3218919
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>gb|AF241575.1|AF241575 Streptomyces griseus PbpA gene, complete cds
          Length = 1458

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 131 ggctccaccttcaaggtcg 149
           |||||||||||||||||||
Sbjct: 646 ggctccaccttcaaggtcg 664
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>gb|AC087612.6| Homo sapiens chromosome 15, clone RP11-69G7, complete sequence
          Length = 145405

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 118   aggccagatgtgtggctcc 136
             |||||||||||||||||||
Sbjct: 96331 aggccagatgtgtggctcc 96349
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>ref|XM_238988.3| PREDICTED: Rattus norvegicus similar to Muc5b protein (LOC309114),
            mRNA
          Length = 11034

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 115  ccaaggccagatgtgtggc 133
            |||||||||||||||||||
Sbjct: 1719 ccaaggccagatgtgtggc 1737
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>dbj|AP003905.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1177_E11
          Length = 92375

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 41    tacaccacatctggagggc 59
             |||||||||||||||||||
Sbjct: 75017 tacaccacatctggagggc 74999
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>dbj|AK062907.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-F11, full
           insert sequence
          Length = 757

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 41  tacaccacatctggagggc 59
           |||||||||||||||||||
Sbjct: 284 tacaccacatctggagggc 302
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>gb|AE001825.1| Deinococcus radiodurans R1 chromosome 2, complete sequence
          Length = 412348

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 66     gcttcgagcatccgctgaa 84
              |||||||||||||||||||
Sbjct: 201858 gcttcgagcatccgctgaa 201876
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>gb|AC087899.40| Mus musculus strain C57BL/6J chromosome 19 clone rp23-170m6, complete
             sequence
          Length = 194291

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 116   caaggccagatgtgtggct 134
             |||||||||||||||||||
Sbjct: 26197 caaggccagatgtgtggct 26179
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>gb|AC169037.4| Mus musculus BAC clone RP23-85E20 from chromosome 16, complete sequence
          Length = 184591

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 116    caaggccagatgtgtggct 134
              |||||||||||||||||||
Sbjct: 173145 caaggccagatgtgtggct 173163
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>emb|AL928712.8| Zebrafish DNA sequence from clone CH211-220O11 in linkage group 17,
             complete sequence
          Length = 137441

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 51    ctggagggctgcagagctt 69
             |||||||||||||||||||
Sbjct: 83878 ctggagggctgcagagctt 83896


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 952,963
Number of Sequences: 3902068
Number of extensions: 952963
Number of successful extensions: 73039
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72837
Number of HSP's gapped (non-prelim): 200
length of query: 164
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 142
effective length of database: 17,147,199,772
effective search space: 2434902367624
effective search space used: 2434902367624
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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