ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd20d04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_473883.1| Oryza sativa (japonica cultivar-group), predic... 456 e-125
2dbj|AK069739.1| Oryza sativa (japonica cultivar-group) cDNA clon... 456 e-125
3emb|AL662950.2|OSJN00152 Oryza sativa genomic DNA, chromosome 4,... 137 5e-29
4dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 137 5e-29
5gb|AF465780.1| Lycopersicon esculentum lecithine cholesterol acy... 88 4e-14
6emb|AL161551.2|ATCHRIV51 Arabidopsis thaliana DNA chromosome 4, ... 50 0.008
7emb|AL024486.1|ATT16H5 Arabidopsis thaliana DNA chromosome 4, BA... 50 0.008
8ref|NM_118106.2| Arabidopsis thaliana phosphatidylcholine-sterol... 48 0.033
9gb|AF421149.1| Arabidopsis thaliana lecithine cholesterol acyltr... 48 0.033
10gb|AC137594.2| Oryza sativa (japonica cultivar-group) chromosome... 48 0.033
11dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.033
12gb|BT022028.1| Arabidopsis thaliana At4g19860 gene, complete cds 48 0.033
13dbj|AP006756.2| Oryza sativa (japonica cultivar-group) genomic D... 48 0.033
14gb|AF468223.1| Nicotiana tabacum phospholipase A1 mRNA, complete... 46 0.13
15gb|AC149576.3| Medicago truncatula chromosome 2 BAC clone mte1-1... 46 0.13
16emb|BX826415.1|CNS0A4BM Arabidopsis thaliana Full-length cDNA Co... 46 0.13
17dbj|AK120151.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.13
18gb|AC102176.8| Mus musculus chromosome 15, clone RP23-480E14, co... 44 0.52
19gb|AC160099.1| Unidentified bacterium clone zdt-45e5, complete s... 44 0.52
20gb|AE009952.1| Yersinia pestis KIM, complete genome 42 2.0
21gb|AC164313.3| Mus musculus BAC clone RP23-24F12 from chromosome... 42 2.0
22emb|AL359012.7| Human DNA sequence from clone RP11-339I10 on chr... 42 2.0
23emb|AL137178.7| Human DNA sequence from clone RP11-120K22 on chr... 42 2.0
24gb|AC141561.5| Mus musculus BAC clone RP23-457C15 from chromosom... 42 2.0
25gb|AC092808.2| Homo sapiens chromosome 1 clone RP11-360C2, compl... 42 2.0
26gb|AC114802.5| Homo sapiens BAC clone RP11-790N8 from 2, complet... 42 2.0
27emb|BX293555.7| Mouse DNA sequence from clone RP23-202M10 on chr... 42 2.0
28ref|XM_630211.1| Dictyostelium discoideum hypothetical protein (... 40 8.1
29gb|AC139335.3| Mus musculus BAC clone RP23-376N11 from chromosom... 40 8.1
30ref|XM_726175.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 40 8.1
31gb|AC090246.9| Homo sapiens chromosome 18, clone RP11-699C17, co... 40 8.1
32emb|AL766850.1|SAG766850 Streptococcus agalactiae NEM316 complet... 40 8.1
33gb|AC105224.8| Homo sapiens chromosome 18, clone RP11-689E3, com... 40 8.1
34dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011 40 8.1
35gb|AC079264.23| Homo sapiens Xp BAC RP11-315B16 (Roswell Park Ca... 40 8.1
36gb|AC159000.2| Mus musculus BAC clone RP24-207K16 from chromosom... 40 8.1
37gb|AC154014.4| Mus musculus 6 BAC RP24-409C18 (Roswell Park Canc... 40 8.1
38gb|AF309629.1|AF309628S2 Mus musculus type 1 protein phosphatase... 40 8.1
39emb|BX829134.1|CNS0A4D6 Arabidopsis thaliana Full-length cDNA Co... 40 8.1
40gb|AC154017.7| Mus musculus 6 BAC RP24-156H18 (Roswell Park Canc... 40 8.1
41gb|AE000783.1| Borrelia burgdorferi B31, complete genome 40 8.1
42gb|AC006314.2|AC006314 Homo sapiens PAC clone RP1-314H24 from X,... 40 8.1
43emb|CT486004.9| Mouse DNA sequence from clone RP23-424K3 on chro... 40 8.1
44gb|AC136738.23| Mus musculus chromosome 6, clone RP23-173F22, co... 40 8.1
45emb|AL844545.7| Mouse DNA sequence from clone RP23-383C3 on chro... 40 8.1
46gb|AC140470.3| Mus musculus BAC clone RP24-396I22 from 6, comple... 40 8.1
47emb|CR388001.36| Zebrafish DNA sequence from clone CH211-279I17 ... 40 8.1
48ref|NM_080464.1| Mus musculus protein phosphatase 1, regulatory ... 40 8.1
49emb|AL845174.4| Mouse DNA sequence from clone RP23-156P22 on chr... 40 8.1
50emb|AL732477.10| Mouse DNA sequence from clone RP23-393E8 on chr... 40 8.1 
>ref|XM_473883.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1602

 Score =  456 bits (230), Expect = e-125
 Identities = 482/566 (85%)
 Strand = Plus / Plus

                                                                       
Query: 14  tttggatttggttacgatttccgccaaagtaacaggctttcggaaacacttgacaaattt 73
           |||||||||||||| ||||||||||| |||||||||||||| ||||||||||| | ||||
Sbjct: 412 tttggatttggttatgatttccgccagagtaacaggctttcagaaacacttgatagattt 471

                                                                       
Query: 74  tctaaaaaactagagtcagtatacacagcttcaggaggaaaaaagatcaatctaataaca 133
           || | |||  | |||||||| |||| |||||| |||| ||||||||||||||| || || 
Sbjct: 472 tccagaaagttggagtcagtttacatagcttccggagaaaaaaagatcaatctcattact 531

                                                                       
Query: 134 cattcaatggggggattgcttgttaaatgcttcatgtctcttcatggtgatgtcttcgaa 193
           ||||||||||| ||||||||||| |||||||||||||| || ||| ||||||||||||| 
Sbjct: 532 cattcaatgggaggattgcttgtcaaatgcttcatgtccctccatagtgatgtcttcgag 591

                                                                       
Query: 194 aaatatgtgaagagttggattgcaattgctgcaccatttcaaggtgcgcctgggtacata 253
           |||||  | |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 592 aaatacataaagagttggattgcaattgctgcaccatttcaaggtgcacctgggtacata 651

                                                                       
Query: 254 aatagtgctctgctgaatggaatgtcttttgtggaaggatggcaatccaaattcttcatt 313
           | || |  |||||||||||| ||||||||||| ||||||||| | || | |||||| |||
Sbjct: 652 actactagtctgctgaatggtatgtcttttgtcgaaggatgggagtcaagattctttatt 711

                                                                       
Query: 314 tccaaatggaccatgcagcaattgttaattgaatgcccatcaatatacgagttgttggct 373
           ||||| ||||  ||||||||||||||  | |||||||||||||| ||||| |||||||||
Sbjct: 712 tccaagtggagtatgcagcaattgttgctcgaatgcccatcaatttacgaattgttggct 771

                                                                       
Query: 374 agctcaacctaccactgggaagatacaccattgctacagatctggagagagagcttagat 433
           | ||| |||| ||| ||||||||||| ||||  || |||||||||||| |||  || |||
Sbjct: 772 aactcgaccttccaatgggaagatactccatatctgcagatctggagacagaaattggat 831

                                                                       
Query: 434 gacaatggcaagaaaagtgccatactggagtcgtatgaaccagatgaggcaataaagatg 493
              ||||||||||||||||||||  | ||||| ||||| |||||||| |||||||| |||
Sbjct: 832 actaatggcaagaaaagtgccatgttagagtcatatgagccagatgaagcaataaaaatg 891

                                                                       
Query: 494 attcaaaaagctctttccaagcatgagattatctctgatggaaatcacattcctctgcct 553
           |||  | |||||||||||||||||||||| || |||||||| |  ||||||||  |||| 
Sbjct: 892 attagagaagctctttccaagcatgagatcatttctgatggtatgcacattccattgccc 951

                                     
Query: 554 cttaatgaggatatattaatatgggc 579
           ||| ||  ||||||||| | ||||||
Sbjct: 952 cttgatatggatatattgagatgggc 977
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>dbj|AK069739.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027J22, full
            insert sequence
          Length = 2334

 Score =  456 bits (230), Expect = e-125
 Identities = 482/566 (85%)
 Strand = Plus / Plus

                                                                        
Query: 14   tttggatttggttacgatttccgccaaagtaacaggctttcggaaacacttgacaaattt 73
            |||||||||||||| ||||||||||| |||||||||||||| ||||||||||| | ||||
Sbjct: 846  tttggatttggttatgatttccgccagagtaacaggctttcagaaacacttgatagattt 905

                                                                        
Query: 74   tctaaaaaactagagtcagtatacacagcttcaggaggaaaaaagatcaatctaataaca 133
            || | |||  | |||||||| |||| |||||| |||| ||||||||||||||| || || 
Sbjct: 906  tccagaaagttggagtcagtttacatagcttccggagaaaaaaagatcaatctcattact 965

                                                                        
Query: 134  cattcaatggggggattgcttgttaaatgcttcatgtctcttcatggtgatgtcttcgaa 193
            ||||||||||| ||||||||||| |||||||||||||| || ||| ||||||||||||| 
Sbjct: 966  cattcaatgggaggattgcttgtcaaatgcttcatgtccctccatagtgatgtcttcgag 1025

                                                                        
Query: 194  aaatatgtgaagagttggattgcaattgctgcaccatttcaaggtgcgcctgggtacata 253
            |||||  | |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1026 aaatacataaagagttggattgcaattgctgcaccatttcaaggtgcacctgggtacata 1085

                                                                        
Query: 254  aatagtgctctgctgaatggaatgtcttttgtggaaggatggcaatccaaattcttcatt 313
            | || |  |||||||||||| ||||||||||| ||||||||| | || | |||||| |||
Sbjct: 1086 actactagtctgctgaatggtatgtcttttgtcgaaggatgggagtcaagattctttatt 1145

                                                                        
Query: 314  tccaaatggaccatgcagcaattgttaattgaatgcccatcaatatacgagttgttggct 373
            ||||| ||||  ||||||||||||||  | |||||||||||||| ||||| |||||||||
Sbjct: 1146 tccaagtggagtatgcagcaattgttgctcgaatgcccatcaatttacgaattgttggct 1205

                                                                        
Query: 374  agctcaacctaccactgggaagatacaccattgctacagatctggagagagagcttagat 433
            | ||| |||| ||| ||||||||||| ||||  || |||||||||||| |||  || |||
Sbjct: 1206 aactcgaccttccaatgggaagatactccatatctgcagatctggagacagaaattggat 1265

                                                                        
Query: 434  gacaatggcaagaaaagtgccatactggagtcgtatgaaccagatgaggcaataaagatg 493
               ||||||||||||||||||||  | ||||| ||||| |||||||| |||||||| |||
Sbjct: 1266 actaatggcaagaaaagtgccatgttagagtcatatgagccagatgaagcaataaaaatg 1325

                                                                        
Query: 494  attcaaaaagctctttccaagcatgagattatctctgatggaaatcacattcctctgcct 553
            |||  | |||||||||||||||||||||| || |||||||| |  ||||||||  |||| 
Sbjct: 1326 attagagaagctctttccaagcatgagatcatttctgatggtatgcacattccattgccc 1385

                                      
Query: 554  cttaatgaggatatattaatatgggc 579
            ||| ||  ||||||||| | ||||||
Sbjct: 1386 cttgatatggatatattgagatgggc 1411
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>emb|AL662950.2|OSJN00152 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0008M17,
             complete sequence
          Length = 133279

 Score =  137 bits (69), Expect = 5e-29
 Identities = 150/177 (84%)
 Strand = Plus / Plus

                                                                         
Query: 344   gaatgcccatcaatatacgagttgttggctagctcaacctaccactgggaagatacacca 403
             |||||||||||||| ||||| |||||||||| ||| |||| ||| ||||||||||| |||
Sbjct: 73195 gaatgcccatcaatttacgaattgttggctaactcgaccttccaatgggaagatactcca 73254

                                                                         
Query: 404   ttgctacagatctggagagagagcttagatgacaatggcaagaaaagtgccatactggag 463
             |  || |||||||||||| |||  || |||   ||||||||||||||||||||  | |||
Sbjct: 73255 tatctgcagatctggagacagaaattggatactaatggcaagaaaagtgccatgttagag 73314

                                                                      
Query: 464   tcgtatgaaccagatgaggcaataaagatgattcaaaaagctctttccaagcatgag 520
             || ||||| |||||||| |||||||| ||||||  | ||||||||||||||||||||
Sbjct: 73315 tcatatgagccagatgaagcaataaaaatgattagagaagctctttccaagcatgag 73371



 Score =  121 bits (61), Expect = 3e-24
 Identities = 121/141 (85%)
 Strand = Plus / Plus

                                                                         
Query: 46    caggctttcggaaacacttgacaaattttctaaaaaactagagtcagtatacacagcttc 105
             ||||||||| ||||||||||| | |||||| | |||  | |||||||| |||| ||||||
Sbjct: 72517 caggctttcagaaacacttgatagattttccagaaagttggagtcagtttacatagcttc 72576

                                                                         
Query: 106   aggaggaaaaaagatcaatctaataacacattcaatggggggattgcttgttaaatgctt 165
              |||| ||||||||||||||| || || ||||||||||| ||||||||||| ||||||||
Sbjct: 72577 cggagaaaaaaagatcaatctcattactcattcaatgggaggattgcttgtcaaatgctt 72636

                                  
Query: 166   catgtctcttcatggtgatgt 186
             |||||| || ||| |||||||
Sbjct: 72637 catgtccctccatagtgatgt 72657



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 88/103 (85%)
 Strand = Plus / Plus

                                                                         
Query: 235   aggtgcgcctgggtacataaatagtgctctgctgaatggaatgtcttttgtggaaggatg 294
             |||||| ||||||||||||| || |  |||||||||||| ||||||||||| ||||||||
Sbjct: 72977 aggtgcacctgggtacataactactagtctgctgaatggtatgtcttttgtcgaaggatg 73036

                                                        
Query: 295   gcaatccaaattcttcatttccaaatggaccatgcagcaattg 337
             | | || | |||||| |||||||| ||||  ||||||||||||
Sbjct: 73037 ggagtcaagattctttatttccaagtggagtatgcagcaattg 73079



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 50/54 (92%)
 Strand = Plus / Plus

                                                                   
Query: 185   gtcttcgaaaaatatgtgaagagttggattgcaattgctgcaccatttcaaggt 238
             |||||||| |||||  | ||||||||||||||||||||||||||||||||||||
Sbjct: 72760 gtcttcgagaaatacataaagagttggattgcaattgctgcaccatttcaaggt 72813



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                 
Query: 14    tttggatttggttacgatttccgccaaagtaacagg 49
             |||||||||||||| ||||||||||| |||||||||
Sbjct: 72306 tttggatttggttatgatttccgccagagtaacagg 72341
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  137 bits (69), Expect = 5e-29
 Identities = 150/177 (84%)
 Strand = Plus / Plus

                                                                            
Query: 344      gaatgcccatcaatatacgagttgttggctagctcaacctaccactgggaagatacacca 403
                |||||||||||||| ||||| |||||||||| ||| |||| ||| ||||||||||| |||
Sbjct: 31251593 gaatgcccatcaatttacgaattgttggctaactcgaccttccaatgggaagatactcca 31251652

                                                                            
Query: 404      ttgctacagatctggagagagagcttagatgacaatggcaagaaaagtgccatactggag 463
                |  || |||||||||||| |||  || |||   ||||||||||||||||||||  | |||
Sbjct: 31251653 tatctgcagatctggagacagaaattggatactaatggcaagaaaagtgccatgttagag 31251712

                                                                         
Query: 464      tcgtatgaaccagatgaggcaataaagatgattcaaaaagctctttccaagcatgag 520
                || ||||| |||||||| |||||||| ||||||  | ||||||||||||||||||||
Sbjct: 31251713 tcatatgagccagatgaagcaataaaaatgattagagaagctctttccaagcatgag 31251769



 Score =  121 bits (61), Expect = 3e-24
 Identities = 121/141 (85%)
 Strand = Plus / Plus

                                                                            
Query: 46       caggctttcggaaacacttgacaaattttctaaaaaactagagtcagtatacacagcttc 105
                ||||||||| ||||||||||| | |||||| | |||  | |||||||| |||| ||||||
Sbjct: 31250915 caggctttcagaaacacttgatagattttccagaaagttggagtcagtttacatagcttc 31250974

                                                                            
Query: 106      aggaggaaaaaagatcaatctaataacacattcaatggggggattgcttgttaaatgctt 165
                 |||| ||||||||||||||| || || ||||||||||| ||||||||||| ||||||||
Sbjct: 31250975 cggagaaaaaaagatcaatctcattactcattcaatgggaggattgcttgtcaaatgctt 31251034

                                     
Query: 166      catgtctcttcatggtgatgt 186
                |||||| || ||| |||||||
Sbjct: 31251035 catgtccctccatagtgatgt 31251055



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 88/103 (85%)
 Strand = Plus / Plus

                                                                            
Query: 235      aggtgcgcctgggtacataaatagtgctctgctgaatggaatgtcttttgtggaaggatg 294
                |||||| ||||||||||||| || |  |||||||||||| ||||||||||| ||||||||
Sbjct: 31251375 aggtgcacctgggtacataactactagtctgctgaatggtatgtcttttgtcgaaggatg 31251434

                                                           
Query: 295      gcaatccaaattcttcatttccaaatggaccatgcagcaattg 337
                | | || | |||||| |||||||| ||||  ||||||||||||
Sbjct: 31251435 ggagtcaagattctttatttccaagtggagtatgcagcaattg 31251477



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 50/54 (92%)
 Strand = Plus / Plus

                                                                      
Query: 185      gtcttcgaaaaatatgtgaagagttggattgcaattgctgcaccatttcaaggt 238
                |||||||| |||||  | ||||||||||||||||||||||||||||||||||||
Sbjct: 31251158 gtcttcgagaaatacataaagagttggattgcaattgctgcaccatttcaaggt 31251211



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                    
Query: 14       tttggatttggttacgatttccgccaaagtaacagg 49
                |||||||||||||| ||||||||||| |||||||||
Sbjct: 31250704 tttggatttggttatgatttccgccagagtaacagg 31250739
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>gb|AF465780.1| Lycopersicon esculentum lecithine cholesterol acyltransferase-like
           protein mRNA, complete cds
          Length = 1853

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 80/92 (86%)
 Strand = Plus / Plus

                                                                       
Query: 155 gttaaatgcttcatgtctcttcatggtgatgtcttcgaaaaatatgtgaagagttggatt 214
           |||||||| |||||| |||| ||  ||||| | || |||||||||||||||| |||||||
Sbjct: 580 gttaaatgtttcatggctctccacagtgatatttttgaaaaatatgtgaagaattggatt 639

                                           
Query: 215 gcaattgctgcaccatttcaaggtgcgcctgg 246
           ||||| ||||||||||| |||||||| |||||
Sbjct: 640 gcaatagctgcaccattccaaggtgctcctgg 671



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                    
Query: 5   aaaactctgtttggatttggttacgatttccgccaaagtaacaggctttcggaaaca 61
           ||||| || ||||||||||| || |||||||| || || |||||||||  |||||||
Sbjct: 430 aaaacactatttggatttggctatgatttccggcagagcaacaggcttcaggaaaca 486
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>emb|AL161551.2|ATCHRIV51 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 51
          Length = 197114

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                           
Query: 5      aaaactctgtttggatttggttacgatttccgccaaagtaacagg 49
              ||||| || ||||| |||||||| |||||||||||||| ||||||
Sbjct: 169312 aaaaccctttttggttttggttatgatttccgccaaagcaacagg 169268
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>emb|AL024486.1|ATT16H5 Arabidopsis thaliana DNA chromosome 4, BAC clone T16H5 (ESSAII project)
          Length = 95417

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                          
Query: 5     aaaactctgtttggatttggttacgatttccgccaaagtaacagg 49
             ||||| || ||||| |||||||| |||||||||||||| ||||||
Sbjct: 89230 aaaaccctttttggttttggttatgatttccgccaaagcaacagg 89186
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>ref|NM_118106.2| Arabidopsis thaliana phosphatidylcholine-sterol O-acyltransferase
           AT4G19860 mRNA, complete cds
          Length = 1854

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 5   aaaactctgtttggatttggttacgatttccgccaaagtaacag 48
           ||||| || ||||| |||||||| |||||||||||||| |||||
Sbjct: 515 aaaaccctttttggttttggttatgatttccgccaaagcaacag 558
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>gb|AF421149.1| Arabidopsis thaliana lecithine cholesterol acyltransferase-like
           protein (At4g19860) mRNA, complete cds
          Length = 1608

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 5   aaaactctgtttggatttggttacgatttccgccaaagtaacag 48
           ||||| || ||||| |||||||| |||||||||||||| |||||
Sbjct: 412 aaaaccctttttggttttggttatgatttccgccaaagcaacag 455
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>gb|AC137594.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
              OSJNBa0065A15, complete sequence
          Length = 168806

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                  
Query: 14     tttggatttggttacgatttccgccaaagtaacagg 49
              ||||||| |||||| ||||| |||||||||||||||
Sbjct: 154528 tttggatatggttatgattttcgccaaagtaacagg 154563
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                    
Query: 14       tttggatttggttacgatttccgccaaagtaacagg 49
                ||||||| |||||| ||||| |||||||||||||||
Sbjct: 19671453 tttggatatggttatgattttcgccaaagtaacagg 19671488
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>gb|BT022028.1| Arabidopsis thaliana At4g19860 gene, complete cds
          Length = 1716

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 5   aaaactctgtttggatttggttacgatttccgccaaagtaacag 48
           ||||| || ||||| |||||||| |||||||||||||| |||||
Sbjct: 488 aaaaccctttttggttttggttatgatttccgccaaagcaacag 531
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>dbj|AP006756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0450E05
          Length = 176553

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                 
Query: 14    tttggatttggttacgatttccgccaaagtaacagg 49
             ||||||| |||||| ||||| |||||||||||||||
Sbjct: 17139 tttggatatggttatgattttcgccaaagtaacagg 17174
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>gb|AF468223.1| Nicotiana tabacum phospholipase A1 mRNA, complete cds
          Length = 1691

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                              
Query: 320 tggaccatgcagcaattgttaattgaatgcccatcaatatacgagttgttg 370
           ||||| ||||| ||||||||  |||| ||||||||||| |||||| |||||
Sbjct: 781 tggacaatgcatcaattgttggttgagtgcccatcaatctacgagatgttg 831
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>gb|AC149576.3| Medicago truncatula chromosome 2 BAC clone mte1-17c12, complete
             sequence
          Length = 75005

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 269   aatggaatgtcttttgtggaaggatgg 295
             ||||||||||| |||||||||||||||
Sbjct: 39993 aatggaatgtcctttgtggaaggatgg 40019



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 194   aaatatgtgaagagttggattgcaattgctgcaccatt 231
             |||||||| |||| |||||||||||||  |||||||||
Sbjct: 39106 aaatatgttaagaattggattgcaatttgtgcaccatt 39143
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>emb|BX826415.1|CNS0A4BM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB24ZE02 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1838

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 5   aaaactctgtttggatttggttacgatttccgccaaagtaaca 47
           ||||| || ||||| |||||||| |||||||||||||| ||||
Sbjct: 478 aaaaccctttttggttttggttaagatttccgccaaagcaaca 520
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>dbj|AK120151.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013029N13, full
           insert sequence
          Length = 2302

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 14  tttggatttggttacgatttccgccaaagtaacag 48
           ||||||| |||||| ||||| ||||||||||||||
Sbjct: 561 tttggatatggttatgattttcgccaaagtaacag 595
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>gb|AC102176.8| Mus musculus chromosome 15, clone RP23-480E14, complete sequence
          Length = 181577

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 92     gtatacacagcttcaggaggaa 113
              ||||||||||||||||||||||
Sbjct: 103402 gtatacacagcttcaggaggaa 103381
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>gb|AC160099.1| Unidentified bacterium clone zdt-45e5, complete sequence
          Length = 35743

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 57   aaacacttgacaaattttctaaaaaa 82
            |||||||||||| |||||||||||||
Sbjct: 9865 aaacacttgacatattttctaaaaaa 9890
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>gb|AE009952.1| Yersinia pestis KIM, complete genome
          Length = 4600755

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 555     ttaatgaggatatattaatat 575
               |||||||||||||||||||||
Sbjct: 3576189 ttaatgaggatatattaatat 3576169
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>gb|AC164313.3| Mus musculus BAC clone RP23-24F12 from chromosome 3, complete sequence
          Length = 196368

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 483    caataaagatgattcaaaaag 503
              |||||||||||||||||||||
Sbjct: 112141 caataaagatgattcaaaaag 112121
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>emb|AL359012.7| Human DNA sequence from clone RP11-339I10 on chromosome 13 Contains ESTs,
              STSs and GSSs, complete sequence
          Length = 176446

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 510    ccaagcatgagattatctctg 530
              |||||||||||||||||||||
Sbjct: 135396 ccaagcatgagattatctctg 135376
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>emb|AL137178.7| Human DNA sequence from clone RP11-120K22 on chromosome 6 Contains the
             5' end of the BMP5 gene for bone morphogenetic protein 5,
             complete sequence
          Length = 112659

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 113   aaaaagatcaatctaataaca 133
             |||||||||||||||||||||
Sbjct: 17287 aaaaagatcaatctaataaca 17267
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>gb|AC141561.5| Mus musculus BAC clone RP23-457C15 from chromosome 3, complete sequence
          Length = 169547

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 483   caataaagatgattcaaaaag 503
             |||||||||||||||||||||
Sbjct: 67763 caataaagatgattcaaaaag 67743
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>gb|AC092808.2| Homo sapiens chromosome 1 clone RP11-360C2, complete sequence
          Length = 151426

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 47     aggctttcggaaacacttgac 67
              |||||||||||||||||||||
Sbjct: 124069 aggctttcggaaacacttgac 124049
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>gb|AC114802.5| Homo sapiens BAC clone RP11-790N8 from 2, complete sequence
          Length = 154814

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 535   aaatcacattcctctgcctct 555
             |||||||||||||||||||||
Sbjct: 10713 aaatcacattcctctgcctct 10733
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>emb|BX293555.7| Mouse DNA sequence from clone RP23-202M10 on chromosome 2, complete
             sequence
          Length = 192154

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 56    gaaacacttgacaaattttct 76
             |||||||||||||||||||||
Sbjct: 86328 gaaacacttgacaaattttct 86348
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>ref|XM_630211.1| Dictyostelium discoideum hypothetical protein (DDB0191589), partial
            mRNA
          Length = 7659

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 481  ggcaataaagatgattcaaa 500
            ||||||||||||||||||||
Sbjct: 4915 ggcaataaagatgattcaaa 4934
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>gb|AC139335.3| Mus musculus BAC clone RP23-376N11 from chromosome 10, complete
             sequence
          Length = 195132

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 542   attcctctgcctcttaatga 561
             ||||||||||||||||||||
Sbjct: 86931 attcctctgcctcttaatga 86912
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>ref|XM_726175.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY03273)
           partial mRNA
          Length = 1800

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 484 aataaagatgattcaaaaag 503
           ||||||||||||||||||||
Sbjct: 664 aataaagatgattcaaaaag 683
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>gb|AC090246.9| Homo sapiens chromosome 18, clone RP11-699C17, complete sequence
          Length = 176433

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 256    tagtgctctgctgaatggaa 275
              ||||||||||||||||||||
Sbjct: 151537 tagtgctctgctgaatggaa 151556
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>emb|AL766850.1|SAG766850 Streptococcus agalactiae NEM316 complete genome, segment 8
          Length = 199050

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 510    ccaagcatgagattatctct 529
              ||||||||||||||||||||
Sbjct: 100975 ccaagcatgagattatctct 100956
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>gb|AC105224.8| Homo sapiens chromosome 18, clone RP11-689E3, complete sequence
          Length = 199051

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 256   tagtgctctgctgaatggaa 275
             ||||||||||||||||||||
Sbjct: 81108 tagtgctctgctgaatggaa 81127
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>dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011
          Length = 2505489

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 362     gagttgttggctagctcaac 381
               ||||||||||||||||||||
Sbjct: 1932517 gagttgttggctagctcaac 1932498
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>gb|AC079264.23| Homo sapiens Xp BAC RP11-315B16 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 194851

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 192   aaaaatatgtgaagagttgg 211
             ||||||||||||||||||||
Sbjct: 69272 aaaaatatgtgaagagttgg 69253
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>gb|AC159000.2| Mus musculus BAC clone RP24-207K16 from chromosome 9, complete sequence
          Length = 152872

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 421    agagagcttagatgacaatg 440
              ||||||||||||||||||||
Sbjct: 113887 agagagcttagatgacaatg 113868
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>gb|AC154014.4| Mus musculus 6 BAC RP24-409C18 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 161963

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 409    acagatctggagagagagcttaga 432
              |||| |||||||||||||||||||
Sbjct: 135232 acagttctggagagagagcttaga 135255
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>gb|AF309629.1|AF309628S2 Mus musculus type 1 protein phosphatase targeting subunit RGL/GM
            gene, exons 2, 3, 4, and complete cds
          Length = 9680

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 158  aaatgcttcatgtctcttca 177
            ||||||||||||||||||||
Sbjct: 5910 aaatgcttcatgtctcttca 5929
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>emb|BX829134.1|CNS0A4D6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL74ZE02 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 881

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 103 ttcaggaggaaaaaagatcaatct 126
           ||||||||||||||| ||||||||
Sbjct: 740 ttcaggaggaaaaaaaatcaatct 717
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>gb|AC154017.7| Mus musculus 6 BAC RP24-156H18 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 193116

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 409    acagatctggagagagagcttaga 432
              |||| |||||||||||||||||||
Sbjct: 138126 acagttctggagagagagcttaga 138103
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>gb|AE000783.1| Borrelia burgdorferi B31, complete genome
          Length = 910724

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 294    ggcaatccaaattcttcatttcca 317
              |||||| |||||||||||||||||
Sbjct: 837384 ggcaattcaaattcttcatttcca 837407
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>gb|AC006314.2|AC006314 Homo sapiens PAC clone RP1-314H24 from X, complete sequence
          Length = 56730

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 108   gaggaaaaaagatcaatcta 127
             ||||||||||||||||||||
Sbjct: 50241 gaggaaaaaagatcaatcta 50222
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>emb|CT486004.9| Mouse DNA sequence from clone RP23-424K3 on chromosome 9, complete
             sequence
          Length = 212874

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 421   agagagcttagatgacaatg 440
             ||||||||||||||||||||
Sbjct: 81286 agagagcttagatgacaatg 81267
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>gb|AC136738.23| Mus musculus chromosome 6, clone RP23-173F22, complete sequence
          Length = 195153

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 158    aaatgcttcatgtctcttca 177
              ||||||||||||||||||||
Sbjct: 133826 aaatgcttcatgtctcttca 133845
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>emb|AL844545.7| Mouse DNA sequence from clone RP23-383C3 on chromosome 2, complete
             sequence
          Length = 120913

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 431   gatgacaatggcaagaaaag 450
             ||||||||||||||||||||
Sbjct: 79325 gatgacaatggcaagaaaag 79344
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>gb|AC140470.3| Mus musculus BAC clone RP24-396I22 from 6, complete sequence
          Length = 166343

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 158   aaatgcttcatgtctcttca 177
             ||||||||||||||||||||
Sbjct: 65663 aaatgcttcatgtctcttca 65682
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>emb|CR388001.36| Zebrafish DNA sequence from clone CH211-279I17 in linkage group 22,
             complete sequence
          Length = 123028

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 142   ggggggattgcttgttaaat 161
             ||||||||||||||||||||
Sbjct: 42603 ggggggattgcttgttaaat 42584
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>ref|NM_080464.1| Mus musculus protein phosphatase 1, regulatory (inhibitor) subunit 3A
            (Ppp1r3a), mRNA
          Length = 7321

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 158  aaatgcttcatgtctcttca 177
            ||||||||||||||||||||
Sbjct: 3551 aaatgcttcatgtctcttca 3570
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>emb|AL845174.4| Mouse DNA sequence from clone RP23-156P22 on chromosome 2, complete
              sequence
          Length = 216475

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 536    aatcacattcctctgcctct 555
              ||||||||||||||||||||
Sbjct: 194455 aatcacattcctctgcctct 194436
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>emb|AL732477.10| Mouse DNA sequence from clone RP23-393E8 on chromosome 2, complete
             sequence
          Length = 187993

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    gaaacacttgacaaattttc 75
             ||||||||||||||||||||
Sbjct: 41721 gaaacacttgacaaattttc 41740


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,549,852
Number of Sequences: 3902068
Number of extensions: 6549852
Number of successful extensions: 131965
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 131692
Number of HSP's gapped (non-prelim): 269
length of query: 594
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 571
effective length of database: 17,143,297,704
effective search space: 9788822988984
effective search space used: 9788822988984
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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