ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd20b02 |
|---|---|
| Clone Library Name | barley_pub |
>VL96_IRV1 (P22856) L96 protein| Length = 867 Score = 55.8 bits (133), Expect = 1e-07 Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 20/180 (11%) Frame = +2 Query: 110 PMVPVPHVPKING--EIPSLDEATMDHE-RLSDRLRLYELTENKVKGDGNCQFRALSDQL 280 P V P KI E+P D + + R R Y++ VKGDGNC FRA+ L Sbjct: 569 PSVTPPSSVKIKKRPELPEYKGGNADRDLEILARRRGYKVIP--VKGDGNCLFRAVGKSL 626 Query: 281 YQTPD---HHEFVREQIISQLKSNREAYDGYV----------PMAY----DEYLDKVSRN 409 + HE +R Q+++ L S++E + Y+ P Y + Y+ +S+ Sbjct: 627 RLNQNIKYSHEDLRAQVVTYLTSHKEFLEPYLEYVTESGDTTPQEYAKNVERYIKNISKP 686 Query: 410 GEWGDHVTLQAAADKYGVKIFVMTSFKDTCYIEIQPKVQKSNKVVLLSFWAEVHYNSIFP 589 G WGD + L+ ++ VK ++ +T ++ ++ L F + HY ++ P Sbjct: 687 GTWGDFICLRVLSEILKVKFNLL--ILNTRNFQVISNNDTFKPLIPLGFIDDYHYTALTP 744
>OTUD3_HUMAN (Q5T2D3) OTU domain-containing protein 3| Length = 398 Score = 43.5 bits (101), Expect = 6e-04 Identities = 30/137 (21%), Positives = 70/137 (51%), Gaps = 2/137 (1%) Frame = +2 Query: 194 SDRLRLYELTENKVKGDGNCQFRALSDQLYQTPDHHEFVREQIISQLKSNREAYDGYV-- 367 +++L+ L +V GDGNC FRAL DQL +H R++ + + RE ++ +V Sbjct: 57 ANQLQALGLKLREVPGDGNCLFRALGDQLEGHSRNHLKHRQETVDYMIKQREDFEPFVED 116 Query: 368 PMAYDEYLDKVSRNGEWGDHVTLQAAADKYGVKIFVMTSFKDTCYIEIQPKVQKSNKVVL 547 + +++++ +++ G + + + A A + + + + + +I+ + S + + Sbjct: 117 DIPFEKHVASLAKPGTFAGNDAIVAFARNHQLNVVIHQ--LNAPLWQIRGTEKSSVRELH 174 Query: 548 LSFWAEVHYNSIFPQND 598 +++ HY+S+ ND Sbjct: 175 IAYRYGEHYDSVRRIND 191
>OTU6B_CHICK (Q5ZIP6) OTU domain-containing protein 6B| Length = 302 Score = 43.1 bits (100), Expect = 8e-04 Identities = 41/172 (23%), Positives = 70/172 (40%), Gaps = 21/172 (12%) Frame = +2 Query: 149 EIPSLDEAT-MDHERLSDRLRLYELTENKVKGDGNCQFRALSDQLYQTPDHHE-----FV 310 EI +L A ++ ++L+ L L ++ DG+C +RA+ DQL DHH + Sbjct: 132 EIENLTGARHLESQKLASLLAARHLEIKQIPSDGHCMYRAIEDQL---KDHHNSWTVATL 188 Query: 311 REQIISQLKS----------NREAYDGYVPMAYDEYLDKVSRNGEWGDHVTLQAAADKYG 460 R Q + S N D Y +++Y D ++ WG + L+A + Sbjct: 189 RNQTAKYIHSHFDDFLPFLTNPNTGDMYSKEEFEKYCDDIANTAAWGGQLELRALSHILQ 248 Query: 461 VKIFVMTSFKDTCYIEIQPKVQKSNKVVLLSFWAEV-----HYNSIFPQNDA 601 I V+ + + + S K ++L + HYNS+ DA Sbjct: 249 TPIEVVQMDSPSIIV----GEEYSGKPIILVYMRHAYGLGEHYNSVKLLTDA 296
>OTU6B_HUMAN (Q8N6M0) OTU domain-containing protein 6B| Length = 293 Score = 42.0 bits (97), Expect = 0.002 Identities = 37/162 (22%), Positives = 72/162 (44%), Gaps = 17/162 (10%) Frame = +2 Query: 149 EIPSLDEAT-MDHERLSDRLRLYELTENKVKGDGNCQFRALSDQL-------------YQ 286 EI +L A M+ E+L+ L +L ++ DG+C ++A+ DQL Q Sbjct: 123 EIENLTGARHMESEKLAQILAARQLEIKQIPSDGHCMYKAIEDQLKEKDCALTVVALRSQ 182 Query: 287 TPDHHEFVREQIISQLKSNREAYDGYVPMAYDEYLDKVSRNGEWGDHVTLQAAADKYGVK 466 T ++ + E + L +N D Y P + +Y + + WG + L+A + Sbjct: 183 TAEYMQSHVEDFLPFL-TNPNTGDMYTPEEFQKYCEDIVNTAAWGGQLELRALSHILQTP 241 Query: 467 IFVMTSFKDTCYIEIQPKVQKSNKVVLL---SFWAEVHYNSI 583 I ++ + D+ I + + K +++ ++ HYNS+ Sbjct: 242 IEIIQA--DSPPIIVGEEYSKKPLILVYMRHAYGLGEHYNSV 281
>OTU6B_MOUSE (Q8K2H2) OTU domain-containing protein 6B| Length = 294 Score = 42.0 bits (97), Expect = 0.002 Identities = 40/164 (24%), Positives = 71/164 (43%), Gaps = 19/164 (11%) Frame = +2 Query: 149 EIPSLDEAT-MDHERLSDRLRLYELTENKVKGDGNCQFRALSDQL-------------YQ 286 EI +L A ++ E+L+ L EL ++ DG+C + AL DQL Q Sbjct: 124 EIENLSGARHLESEKLAQILAARELEIKQIPSDGHCMYGALEDQLREQDCALTVASLRRQ 183 Query: 287 TPDHHEFVREQIISQLKSNREAYDGYVPMAYDEYLDKVSRNGEWGDHVTLQAAADKYGVK 466 T ++ + + + L +N D Y P + +Y D + WG + L+A + Sbjct: 184 TAEYMQTHSDDFLPFL-TNPSTGDMYTPEEFGKYCDDIVNTAAWGGQLELRALSHILQTP 242 Query: 467 IFVMTSFKDTCYI-EIQPKVQKSNKVVLL----SFWAEVHYNSI 583 I ++ + + E P+ N +VL+ ++ HYNS+ Sbjct: 243 IEILQADAPPIIVGEEYPR----NPLVLVYMRHAYGLGEHYNSV 282
>YHB3_YEAST (P38747) Hypothetical 36.1 kDa protein in YLF2-PRPS4 intergenic| region Length = 307 Score = 42.0 bits (97), Expect = 0.002 Identities = 33/159 (20%), Positives = 71/159 (44%), Gaps = 19/159 (11%) Frame = +2 Query: 164 DEATMDHERLSDRLRLYELTENKVKGDGNCQFRALSDQLYQTPDHHEFVREQIISQLK-- 337 D M+ E + L +L + ++ DG+C F ++ DQL D + ++ + +L+ Sbjct: 149 DLKKMEQESIDQLCELKKLKQFDIQPDGHCLFASILDQLKLRHDPKKLDQDMDVMKLRWL 208 Query: 338 ---SNREAYDGYVPMAY----------DEYLDKVSRNGEWGDHVTLQAAADKYGVKIFVM 478 +E D ++P + DEY ++ +WG + + A + + I ++ Sbjct: 209 SCNYVQEHRDDFIPYLFDEETMKMKDIDEYTKEMEHTAQWGGEIEILALSHVFDCPISIL 268 Query: 479 TSFKDTCYIEIQPKVQKSNKVVLL----SFWAEVHYNSI 583 S + I++ + K+ ++ L+ S+ HYNS+ Sbjct: 269 MSGRP---IQVYNECGKNPELKLVYYKHSYALGEHYNSL 304
>OTU6A_HUMAN (Q7L8S5) OTU domain-containing protein 6A| Length = 288 Score = 42.0 bits (97), Expect = 0.002 Identities = 42/152 (27%), Positives = 67/152 (44%), Gaps = 15/152 (9%) Frame = +2 Query: 179 DHERLSDRLRLYELTENKVKGDGNCQFRALSDQLYQTPDHHEFVREQIISQLK------- 337 + E+L+ L L + DG+C +RA+ DQL + E +R + S +K Sbjct: 128 EEEKLAAILGARGLEMKAIPADGHCMYRAIQDQLVFSVS-VEMLRCRTASYMKKHVDEFL 186 Query: 338 ---SNREAYDGYVPMAYDE---YLDKVSRNGEWGDHVTLQAAADKYGVKIFVMTSFKDTC 499 SN E D + YD+ Y D + R WG + L+A + I V+ + T Sbjct: 187 PFFSNPETSDSF---GYDDFMIYCDNIVRTTAWGGQLELRALSHVLKTPIEVIQADSPTL 243 Query: 500 YIEIQPKVQKSNKVVLLSFWAEV--HYNSIFP 589 I + V+K +V L + + HYNS+ P Sbjct: 244 IIG-EEYVKKPIILVYLRYAYSLGEHYNSVTP 274
>OTU6A_MOUSE (Q6IE21) OTU domain-containing protein 6A (Hin-6 protease)| Length = 290 Score = 40.0 bits (92), Expect = 0.006 Identities = 38/151 (25%), Positives = 65/151 (43%), Gaps = 14/151 (9%) Frame = +2 Query: 179 DHERLSDRLRLYELTENKVKGDGNCQFRALSDQL----------YQTPDHHEFVREQIIS 328 + E+++ L L + DG+C +RA+ DQL Y+T ++R+ I Sbjct: 129 EEEKVAAILGAKNLEMKTIPADGHCMYRAIQDQLVFSVTIESLRYRTA---YYMRKHIDD 185 Query: 329 QLK--SNREAYDGYVPMAYDEYLDKVSRNGEWGDHVTLQAAADKYGVKIFVMTSFKDTCY 502 L + EA + Y + Y D + N WG + L+A + I V+ + T Sbjct: 186 FLPFFTEPEAGNFYTREDFLRYCDDIVHNASWGGQLELRALSHVLQTPIEVVQANSPTIV 245 Query: 503 IEIQPKVQKSNKVVLLSFWAEV--HYNSIFP 589 I + +K +V L + + HYNS+ P Sbjct: 246 IG-EEYTRKPVTLVYLHYACDFGEHYNSVKP 275
>OTU6B_BRARE (Q7ZV00) OTU domain-containing protein 6B| Length = 293 Score = 38.5 bits (88), Expect = 0.019 Identities = 35/153 (22%), Positives = 69/153 (45%), Gaps = 16/153 (10%) Frame = +2 Query: 188 RLSDRLRLYELTENKVKGDGNCQFRALSDQLYQ--TPDHHEFVREQIISQLKSNREAY-- 355 +L ++L L ++ DG+C +RA+ QL + + +R+Q ++S+ + + Sbjct: 137 KLREKLVERHLQIKEISSDGHCMYRAVEHQLTERGLALGLKELRDQTAQYMRSHADDFMP 196 Query: 356 --------DGYVPMAYDEYLDKVSRNGEWGDHVTLQAAADKYGVKIFVMTSFKDTCYIEI 511 D Y +++Y V+ WG + L+A + + I V+ + D+ I I Sbjct: 197 FLTNPNTGDMYTAEEFEKYCSDVADTAAWGGQLELKALSQVLQLPIEVIQA--DSPCITI 254 Query: 512 QPKVQKSNKVVLL----SFWAEVHYNSIFPQND 598 + K K+ L+ ++ HYNS+ P D Sbjct: 255 GEEYDKP-KITLIYMRHAYGLGEHYNSVEPLKD 286
>OTU_DROME (P10383) Protein ovarian tumor locus| Length = 853 Score = 38.1 bits (87), Expect = 0.025 Identities = 22/115 (19%), Positives = 53/115 (46%) Frame = +2 Query: 242 DGNCQFRALSDQLYQTPDHHEFVREQIISQLKSNREAYDGYVPMAYDEYLDKVSRNGEWG 421 D + FR +++Q+Y T H +R + + + R ++ +P +D Y+ +S+ +G Sbjct: 37 DASSLFRVIAEQMYDTQMLHYEIRLECVRFMTLKRRIFEKEIPGDFDSYMQDMSKPKTYG 96 Query: 422 DHVTLQAAADKYGVKIFVMTSFKDTCYIEIQPKVQKSNKVVLLSFWAEVHYNSIF 586 L+A + Y + + + + + ++ +V F E H++S++ Sbjct: 97 TMTELRAMSCLYRRNVILYEPYNMGTSVVFNRRYAENFRVF---FNNENHFDSVY 148
>OTU6B_XENLA (Q6GM06) OTU domain-containing protein 6B| Length = 294 Score = 37.7 bits (86), Expect = 0.032 Identities = 39/164 (23%), Positives = 67/164 (40%), Gaps = 19/164 (11%) Frame = +2 Query: 149 EIPSLDEAT-MDHERLSDRLRLYELTENKVKGDGNCQFRALSDQL-------------YQ 286 EI +L A ++ ++L+ L EL ++ DG+C +RA+ QL Q Sbjct: 126 EIANLSGARHLESQKLAQILAERELQIRQIPSDGHCMYRAIEHQLNEQGNSLTVANLRSQ 185 Query: 287 TPDHHEFVREQIISQLKSNREAYDGYVPMAYDEYLDKVSRNGEWGDHVTLQAAADKYGVK 466 T D+ + E + L +N D Y + +Y + WG + L+A + Sbjct: 186 TADYMQKRAEDFLPFL-TNSSTGDMYTQEEFQKYCTDIVNTPAWGGQLELRALSHILKTP 244 Query: 467 IFVMTSFKDTCYIEIQPKVQKSNKVVLLSFWAEV-----HYNSI 583 I V+ + + I + SNK + L + HYNS+ Sbjct: 245 IEVIQAES----LPIVIGEEYSNKPITLVYMRHAYGLGEHYNSV 284
>OTUD4_HUMAN (Q01804) OTU domain-containing protein 4 (HIV-1-induced protein| HIN-1) Length = 145 Score = 37.0 bits (84), Expect = 0.055 Identities = 23/89 (25%), Positives = 44/89 (49%) Frame = +2 Query: 323 ISQLKSNREAYDGYVPMAYDEYLDKVSRNGEWGDHVTLQAAADKYGVKIFVMTSFKDTCY 502 I L+ NRE ++ ++ +++EYL ++ EW V + A + Y K F++ +++ Sbjct: 4 IHYLRENREKFEAFIEGSFEEYLKRLENPQEWVGQVEISALSLMYR-KDFII--YREPNV 60 Query: 503 IEIQPKVQKSNKVVLLSFWAEVHYNSIFP 589 Q + VLL F HY+ ++P Sbjct: 61 SPSQVTENNFPEKVLLCFSNGNHYDIVYP 89
>OTU6B_XENTR (Q5M8L0) OTU domain-containing protein 6B| Length = 294 Score = 34.7 bits (78), Expect = 0.27 Identities = 38/164 (23%), Positives = 66/164 (40%), Gaps = 19/164 (11%) Frame = +2 Query: 149 EIPSLDEAT-MDHERLSDRLRLYELTENKVKGDGNCQFRALSDQL-------------YQ 286 EI +L A ++ ++L+ L EL ++ DG+C +RA+ QL Q Sbjct: 126 EIANLSGARHLESQKLARILAERELQIRQIPSDGHCMYRAIEHQLRERGNDLTVANLRSQ 185 Query: 287 TPDHHEFVREQIISQLKSNREAYDGYVPMAYDEYLDKVSRNGEWGDHVTLQAAADKYGVK 466 T D+ + E + L +N D Y + +Y + WG + L+A + Sbjct: 186 TADYMQNHAEDFLPFL-TNSSTGDMYTQEEFLKYCTDIVNTPAWGGQLELRALSHILKTA 244 Query: 467 IFVMTSFKDTCYIEIQPKVQKSNKVVLLSFWAEV-----HYNSI 583 I V+ + I + S+K + L + HYNS+ Sbjct: 245 IEVIQAESSPIVI----GEEYSSKAITLVYMRHAYGLGEHYNSV 284
>RRPL_DUGBV (Q66431) RNA-directed RNA polymerase (EC 2.7.7.48) (L protein)| Length = 4036 Score = 32.3 bits (72), Expect = 1.3 Identities = 17/65 (26%), Positives = 35/65 (53%), Gaps = 4/65 (6%) Frame = +2 Query: 239 GDGNCQFRALSDQLY--QTPDHHEFVRE--QIISQLKSNREAYDGYVPMAYDEYLDKVSR 406 GDGNC + ++++ + +TP V+E Q+ +++ + E ++ DEY+ + Sbjct: 36 GDGNCFYHSIAELFFDVKTPSSFRKVKEHLQLAAEVYYDTEPEAVGTGISKDEYIKVAMK 95 Query: 407 NGEWG 421 + EWG Sbjct: 96 DNEWG 100
>PTHR1_DIDMA (P25107) Parathyroid hormone/parathyroid hormone-related peptide| receptor precursor (PTH/PTHr receptor) (PTH/PTHrP type I receptor) Length = 585 Score = 31.2 bits (69), Expect = 3.0 Identities = 15/29 (51%), Positives = 17/29 (58%) Frame = -2 Query: 359 HHRLPGYF*AG*LSAPSQTHGGPEFGTAD 273 HH+LPGY G +S S GPE GT D Sbjct: 527 HHQLPGYVKHGSISENSLPSSGPEPGTKD 555
>MQO2_STAAW (Q8NUM4) Probable malate:quinone oxidoreductase 2 (EC 1.1.99.16)| (Malate dehydrogenase [acceptor] 2) (MQO 2) Length = 498 Score = 31.2 bits (69), Expect = 3.0 Identities = 16/51 (31%), Positives = 26/51 (50%) Frame = +2 Query: 56 PGSDDCFEMEEEVEKRFYPMVPVPHVPKINGEIPSLDEATMDHERLSDRLR 208 PG+ + EV +R +P PKI IPS E+ ++ E+L ++R Sbjct: 434 PGASTSVSVALEVLERNFPEYKTEWAPKIKKMIPSYGESLIEDEKLMRKIR 484
>MQO2_STAAS (Q6G669) Probable malate:quinone oxidoreductase 2 (EC 1.1.99.16)| (Malate dehydrogenase [acceptor] 2) (MQO 2) Length = 498 Score = 31.2 bits (69), Expect = 3.0 Identities = 16/51 (31%), Positives = 26/51 (50%) Frame = +2 Query: 56 PGSDDCFEMEEEVEKRFYPMVPVPHVPKINGEIPSLDEATMDHERLSDRLR 208 PG+ + EV +R +P PKI IPS E+ ++ E+L ++R Sbjct: 434 PGASTSVSVALEVLERNFPEYKTEWAPKIKKMIPSYGESLIEDEKLMRKIR 484
>MQO2_STAAR (Q6GDJ6) Probable malate:quinone oxidoreductase 2 (EC 1.1.99.16)| (Malate dehydrogenase [acceptor] 2) (MQO 2) Length = 498 Score = 31.2 bits (69), Expect = 3.0 Identities = 16/51 (31%), Positives = 26/51 (50%) Frame = +2 Query: 56 PGSDDCFEMEEEVEKRFYPMVPVPHVPKINGEIPSLDEATMDHERLSDRLR 208 PG+ + EV +R +P PKI IPS E+ ++ E+L ++R Sbjct: 434 PGASTSVSVALEVLERNFPEYKTEWAPKIKKMIPSYGESLIEDEKLMRKIR 484
>MQO2_STAAN (P99115) Probable malate:quinone oxidoreductase 2 (EC 1.1.99.16)| (Malate dehydrogenase [acceptor] 2) (MQO 2) Length = 498 Score = 31.2 bits (69), Expect = 3.0 Identities = 16/51 (31%), Positives = 26/51 (50%) Frame = +2 Query: 56 PGSDDCFEMEEEVEKRFYPMVPVPHVPKINGEIPSLDEATMDHERLSDRLR 208 PG+ + EV +R +P PKI IPS E+ ++ E+L ++R Sbjct: 434 PGASTSVSVALEVLERNFPEYKTEWAPKIKKMIPSYGESLIEDEKLMRKIR 484
>MQO2_STAAM (P65424) Probable malate:quinone oxidoreductase 2 (EC 1.1.99.16)| (Malate dehydrogenase [acceptor] 2) (MQO 2) Length = 498 Score = 31.2 bits (69), Expect = 3.0 Identities = 16/51 (31%), Positives = 26/51 (50%) Frame = +2 Query: 56 PGSDDCFEMEEEVEKRFYPMVPVPHVPKINGEIPSLDEATMDHERLSDRLR 208 PG+ + EV +R +P PKI IPS E+ ++ E+L ++R Sbjct: 434 PGASTSVSVALEVLERNFPEYKTEWAPKIKKMIPSYGESLIEDEKLMRKIR 484
>MQO2_STAAC (Q5HCU5) Probable malate:quinone oxidoreductase 2 (EC 1.1.99.16)| (Malate dehydrogenase [acceptor] 2) (MQO 2) Length = 498 Score = 31.2 bits (69), Expect = 3.0 Identities = 16/51 (31%), Positives = 26/51 (50%) Frame = +2 Query: 56 PGSDDCFEMEEEVEKRFYPMVPVPHVPKINGEIPSLDEATMDHERLSDRLR 208 PG+ + EV +R +P PKI IPS E+ ++ E+L ++R Sbjct: 434 PGASTSVSVALEVLERNFPEYKTEWAPKIKKMIPSYGESLIEDEKLMRKIR 484
>RNC_MYCMO (Q6KHN3) Ribonuclease III (EC 3.1.26.3) (RNase III)| Length = 246 Score = 30.8 bits (68), Expect = 3.9 Identities = 16/59 (27%), Positives = 28/59 (47%) Frame = -1 Query: 555 KLNSTTLLDF*TLGWISM*HVSLNEVMTKIFTPYLSAAACKVTWSPHSPFRETLSKYSS 379 K+N+ F ++ + L E + +IF PY+S + P S F+E + YS+ Sbjct: 117 KINADLFESFVAAIYLDLGDEKLEEFLKEIFYPYISTTNLESIKDPKSSFQEYIQSYSN 175
>NU4M_LEMCA (Q34878) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH| dehydrogenase subunit 4) Length = 459 Score = 30.4 bits (67), Expect = 5.1 Identities = 11/24 (45%), Positives = 16/24 (66%) Frame = +3 Query: 117 SQFLMSLKLMVKFHHLTKPPWTMK 188 + +L+ L +M HHL K PWT+K Sbjct: 69 TMWLLPLMIMASQHHLKKEPWTLK 92
>TNAP3_HUMAN (P21580) Tumor necrosis factor, alpha-induced protein 3 (EC| 3.-.-.-) (Putative DNA-binding protein A20) (Zinc finger protein A20) Length = 790 Score = 30.0 bits (66), Expect = 6.7 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Frame = +2 Query: 167 EATMDHERLSDRLR-LYELTENKVKGDGNCQFRALSDQLYQTPDHHEFVREQIISQLK 337 +AT++ ++ + R + +L K GDGNC A S ++ D +R+ + S LK Sbjct: 74 QATLESQKKLNWCREVRKLVALKTNGDGNCLMHATSQYMWGVQDTDLVLRKALFSTLK 131
>RHG09_HUMAN (Q9BRR9) Rho-GTPase-activating protein 9| Length = 750 Score = 30.0 bits (66), Expect = 6.7 Identities = 15/35 (42%), Positives = 24/35 (68%) Frame = +1 Query: 571 LQLDISTERRSEVAHGEEEEMVAVLTAPPLMRLSS 675 L+L +S +E++ GE+EE + L + PL+RLSS Sbjct: 462 LELRLSGSGPAELSAGEDEEEESELVSKPLLRLSS 496
>RY44_DROME (Q24498) Ryanodine receptor 44F| Length = 5127 Score = 30.0 bits (66), Expect = 6.7 Identities = 15/37 (40%), Positives = 21/37 (56%) Frame = +1 Query: 565 GSLQLDISTERRSEVAHGEEEEMVAVLTAPPLMRLSS 675 G+ LD S ERR+ VAHG + T P +RL++ Sbjct: 1452 GARTLDTSLERRNTVAHGRNVVNQQMTTRAPTLRLNN 1488
>DHX34_HUMAN (Q14147) Probable ATP-dependent RNA helicase DHX34 (EC 3.6.1.-)| (DEAH box protein 34) Length = 576 Score = 29.6 bits (65), Expect = 8.7 Identities = 18/51 (35%), Positives = 21/51 (41%) Frame = -2 Query: 668 SLINGGAVRTATISSSSPCATSERRSVEISSCSEPPPKSSIAPLCWTSEPW 516 SL+ A +S SP S + S E C PP S AP C T W Sbjct: 515 SLVEPVLTIAAALSVQSPFTRSAQSSPE---CCTPPASSLAAPRCCTHRSW 562
>MCAS_MYCBO (Q02251) Mycocerosic acid synthase (EC 2.3.1.111)| Length = 2111 Score = 29.6 bits (65), Expect = 8.7 Identities = 15/60 (25%), Positives = 27/60 (45%) Frame = +2 Query: 245 GNCQFRALSDQLYQTPDHHEFVREQIISQLKSNREAYDGYVPMAYDEYLDKVSRNGEWGD 424 G F A ++ TP+ + E ++ + AY GY+P+ +L + R WG+ Sbjct: 1945 GRATFLAEGGEIMITPEEGAYAFETLVR----HDRAYSGYIPILGAPWLADLVRRSPWGE 2000
>AG_BRANA (Q01540) Floral homeotic protein AGAMOUS| Length = 252 Score = 29.6 bits (65), Expect = 8.7 Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 12/64 (18%) Frame = +2 Query: 194 SDRLRLYELTENKVKGDGNCQFRALSD------------QLYQTPDHHEFVREQIISQLK 337 S R RLYE + N VKG +A+SD Q YQ +R+QIIS Sbjct: 65 SSRGRLYEYSNNSVKGTIERYKKAISDNSNTGSVAEINAQYYQ--QESAKLRQQIISIQN 122 Query: 338 SNRE 349 SNR+ Sbjct: 123 SNRQ 126
>AG_ARATH (P17839) Floral homeotic protein AGAMOUS| Length = 252 Score = 29.6 bits (65), Expect = 8.7 Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 12/64 (18%) Frame = +2 Query: 194 SDRLRLYELTENKVKGDGNCQFRALSD------------QLYQTPDHHEFVREQIISQLK 337 S R RLYE + N VKG +A+SD Q YQ +R+QIIS Sbjct: 65 SSRGRLYEYSNNSVKGTIERYKKAISDNSNTGSVAEINAQYYQ--QESAKLRQQIISIQN 122 Query: 338 SNRE 349 SNR+ Sbjct: 123 SNRQ 126 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 97,857,823 Number of Sequences: 219361 Number of extensions: 2030194 Number of successful extensions: 6561 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 6255 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6543 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6598423128 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
