| Clone Name | basd20b02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_468427.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1799 Score = 640 bits (323), Expect = e-180 Identities = 506/567 (89%) Strand = Plus / Plus Query: 79 aatggaggaagaagtagagaagagattttaccccatggtcccagttcctcatgtccctaa 138 |||||| |||||||||| ||||| |||||||||||||| |||||||| ||||| ||||| Sbjct: 904 aatggatgaagaagtaggaaagaggttttaccccatggtgccagttccccatgttcctaa 963 Query: 139 aattaatggtgaaattccatcacttgacgaagccaccatggaccatgaaaggctgtccga 198 ||||||||| || || || ||| | || ||||| ||||||||||||||||||||| | || Sbjct: 964 aattaatggagagatcccttcagtcgatgaagctaccatggaccatgaaaggctgacaga 1023 Query: 199 caggttgaggctgtatgaactaactgagaacaaggtgaagggtgatggcaattgtcagtt 258 ||||||||| ||||||||||| |||| |||||||||| || |||||||| |||||||| Sbjct: 1024 aaggttgaggttgtatgaactagttgagcacaaggtgaaaggagatggcaactgtcagtt 1083 Query: 259 ccgtgcactatcagatcagctgtaccaaactccggaccaccatgagtttgtgagggagca 318 || |||||||||||||| ||||| |||| ||| || |||||||||||||||||| |||| Sbjct: 1084 tcgggcactatcagatcaactgtatcaaagtcccgatcaccatgagtttgtgaggcagca 1143 Query: 319 gataattagccagcttaaaagtaaccgggaagcctatgatggatatgtccccatggcata 378 ||| || |||||||||||||||||||| || ||||| ||||||||||||||||||||||| Sbjct: 1144 gattatgagccagcttaaaagtaaccgtgatgcctacgatggatatgtccccatggcata 1203 Query: 379 tgatgagtatttggacaaagtctcacgaaatggtgaatggggtgaccatgtgactttaca 438 ||| || || ||||| ||||| |||| |||||||||||||||||||||||||||| |||| Sbjct: 1204 tgacgattacttggagaaagtatcacaaaatggtgaatggggtgaccatgtgactctaca 1263 Query: 439 ggctgctgctgacaagtacggagtgaagattttcgtcatgacctcgttcaaggatacgtg 498 |||||||||||||||||| ||||| ||||||||||| ||||| ||||||||||||||||| Sbjct: 1264 ggctgctgctgacaagtatggagttaagattttcgtgatgacatcgttcaaggatacgtg 1323 Query: 499 ctacatcgagatccaacccaaggttcagaagtccaacaaagtggtgctattgagcttttg 558 |||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1324 ctacattgagatccaaccaaaggttcagaagtccaacaaagtggtgctgttgagcttttg 1383 Query: 559 ggcggaggttcactacaactcgatatttccacagaacgacgctccgaggttgcacacggc 618 ||||||||||||||||||||| |||| ||| |||||||| || ||||||| ||| ||| | Sbjct: 1384 ggcggaggttcactacaactccatatatccgcagaacgatgcgccgaggtcgcagacgac 1443 Query: 619 gaagaagaggagatggtggccgttctc 645 || |||||||||||||||||||||||| Sbjct: 1444 gaggaagaggagatggtggccgttctc 1470
>ref|XM_507052.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1202_E07.21-2 mRNA Length = 2783 Score = 640 bits (323), Expect = e-180 Identities = 506/567 (89%) Strand = Plus / Plus Query: 79 aatggaggaagaagtagagaagagattttaccccatggtcccagttcctcatgtccctaa 138 |||||| |||||||||| ||||| |||||||||||||| |||||||| ||||| ||||| Sbjct: 898 aatggatgaagaagtaggaaagaggttttaccccatggtgccagttccccatgttcctaa 957 Query: 139 aattaatggtgaaattccatcacttgacgaagccaccatggaccatgaaaggctgtccga 198 ||||||||| || || || ||| | || ||||| ||||||||||||||||||||| | || Sbjct: 958 aattaatggagagatcccttcagtcgatgaagctaccatggaccatgaaaggctgacaga 1017 Query: 199 caggttgaggctgtatgaactaactgagaacaaggtgaagggtgatggcaattgtcagtt 258 ||||||||| ||||||||||| |||| |||||||||| || |||||||| |||||||| Sbjct: 1018 aaggttgaggttgtatgaactagttgagcacaaggtgaaaggagatggcaactgtcagtt 1077 Query: 259 ccgtgcactatcagatcagctgtaccaaactccggaccaccatgagtttgtgagggagca 318 || |||||||||||||| ||||| |||| ||| || |||||||||||||||||| |||| Sbjct: 1078 tcgggcactatcagatcaactgtatcaaagtcccgatcaccatgagtttgtgaggcagca 1137 Query: 319 gataattagccagcttaaaagtaaccgggaagcctatgatggatatgtccccatggcata 378 ||| || |||||||||||||||||||| || ||||| ||||||||||||||||||||||| Sbjct: 1138 gattatgagccagcttaaaagtaaccgtgatgcctacgatggatatgtccccatggcata 1197 Query: 379 tgatgagtatttggacaaagtctcacgaaatggtgaatggggtgaccatgtgactttaca 438 ||| || || ||||| ||||| |||| |||||||||||||||||||||||||||| |||| Sbjct: 1198 tgacgattacttggagaaagtatcacaaaatggtgaatggggtgaccatgtgactctaca 1257 Query: 439 ggctgctgctgacaagtacggagtgaagattttcgtcatgacctcgttcaaggatacgtg 498 |||||||||||||||||| ||||| ||||||||||| ||||| ||||||||||||||||| Sbjct: 1258 ggctgctgctgacaagtatggagttaagattttcgtgatgacatcgttcaaggatacgtg 1317 Query: 499 ctacatcgagatccaacccaaggttcagaagtccaacaaagtggtgctattgagcttttg 558 |||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1318 ctacattgagatccaaccaaaggttcagaagtccaacaaagtggtgctgttgagcttttg 1377 Query: 559 ggcggaggttcactacaactcgatatttccacagaacgacgctccgaggttgcacacggc 618 ||||||||||||||||||||| |||| ||| |||||||| || ||||||| ||| ||| | Sbjct: 1378 ggcggaggttcactacaactccatatatccgcagaacgatgcgccgaggtcgcagacgac 1437 Query: 619 gaagaagaggagatggtggccgttctc 645 || |||||||||||||||||||||||| Sbjct: 1438 gaggaagaggagatggtggccgttctc 1464
>dbj|AK119352.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-131-F04, full insert sequence Length = 2782 Score = 640 bits (323), Expect = e-180 Identities = 506/567 (89%) Strand = Plus / Plus Query: 79 aatggaggaagaagtagagaagagattttaccccatggtcccagttcctcatgtccctaa 138 |||||| |||||||||| ||||| |||||||||||||| |||||||| ||||| ||||| Sbjct: 898 aatggatgaagaagtaggaaagaggttttaccccatggtgccagttccccatgttcctaa 957 Query: 139 aattaatggtgaaattccatcacttgacgaagccaccatggaccatgaaaggctgtccga 198 ||||||||| || || || ||| | || ||||| ||||||||||||||||||||| | || Sbjct: 958 aattaatggagagatcccttcagtcgatgaagctaccatggaccatgaaaggctgacaga 1017 Query: 199 caggttgaggctgtatgaactaactgagaacaaggtgaagggtgatggcaattgtcagtt 258 ||||||||| ||||||||||| |||| |||||||||| || |||||||| |||||||| Sbjct: 1018 aaggttgaggttgtatgaactagttgagcacaaggtgaaaggagatggcaactgtcagtt 1077 Query: 259 ccgtgcactatcagatcagctgtaccaaactccggaccaccatgagtttgtgagggagca 318 || |||||||||||||| ||||| |||| ||| || |||||||||||||||||| |||| Sbjct: 1078 tcgggcactatcagatcaactgtatcaaagtcccgatcaccatgagtttgtgaggcagca 1137 Query: 319 gataattagccagcttaaaagtaaccgggaagcctatgatggatatgtccccatggcata 378 ||| || |||||||||||||||||||| || ||||| ||||||||||||||||||||||| Sbjct: 1138 gattatgagccagcttaaaagtaaccgtgatgcctacgatggatatgtccccatggcata 1197 Query: 379 tgatgagtatttggacaaagtctcacgaaatggtgaatggggtgaccatgtgactttaca 438 ||| || || ||||| ||||| |||| |||||||||||||||||||||||||||| |||| Sbjct: 1198 tgacgattacttggagaaagtatcacaaaatggtgaatggggtgaccatgtgactctaca 1257 Query: 439 ggctgctgctgacaagtacggagtgaagattttcgtcatgacctcgttcaaggatacgtg 498 |||||||||||||||||| ||||| ||||||||||| ||||| ||||||||||||||||| Sbjct: 1258 ggctgctgctgacaagtatggagttaagattttcgtgatgacatcgttcaaggatacgtg 1317 Query: 499 ctacatcgagatccaacccaaggttcagaagtccaacaaagtggtgctattgagcttttg 558 |||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1318 ctacattgagatccaaccaaaggttcagaagtccaacaaagtggtgctgttgagcttttg 1377 Query: 559 ggcggaggttcactacaactcgatatttccacagaacgacgctccgaggttgcacacggc 618 ||||||||||||||||||||| |||| ||| |||||||| || ||||||| ||| ||| | Sbjct: 1378 ggcggaggttcactacaactccatatatccgcagaacgatgcgccgaggtcgcagacgac 1437 Query: 619 gaagaagaggagatggtggccgttctc 645 || |||||||||||||||||||||||| Sbjct: 1438 gaggaagaggagatggtggccgttctc 1464
>dbj|AK069427.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019L08, full insert sequence Length = 1799 Score = 640 bits (323), Expect = e-180 Identities = 506/567 (89%) Strand = Plus / Plus Query: 79 aatggaggaagaagtagagaagagattttaccccatggtcccagttcctcatgtccctaa 138 |||||| |||||||||| ||||| |||||||||||||| |||||||| ||||| ||||| Sbjct: 904 aatggatgaagaagtaggaaagaggttttaccccatggtgccagttccccatgttcctaa 963 Query: 139 aattaatggtgaaattccatcacttgacgaagccaccatggaccatgaaaggctgtccga 198 ||||||||| || || || ||| | || ||||| ||||||||||||||||||||| | || Sbjct: 964 aattaatggagagatcccttcagtcgatgaagctaccatggaccatgaaaggctgacaga 1023 Query: 199 caggttgaggctgtatgaactaactgagaacaaggtgaagggtgatggcaattgtcagtt 258 ||||||||| ||||||||||| |||| |||||||||| || |||||||| |||||||| Sbjct: 1024 aaggttgaggttgtatgaactagttgagcacaaggtgaaaggagatggcaactgtcagtt 1083 Query: 259 ccgtgcactatcagatcagctgtaccaaactccggaccaccatgagtttgtgagggagca 318 || |||||||||||||| ||||| |||| ||| || |||||||||||||||||| |||| Sbjct: 1084 tcgggcactatcagatcaactgtatcaaagtcccgatcaccatgagtttgtgaggcagca 1143 Query: 319 gataattagccagcttaaaagtaaccgggaagcctatgatggatatgtccccatggcata 378 ||| || |||||||||||||||||||| || ||||| ||||||||||||||||||||||| Sbjct: 1144 gattatgagccagcttaaaagtaaccgtgatgcctacgatggatatgtccccatggcata 1203 Query: 379 tgatgagtatttggacaaagtctcacgaaatggtgaatggggtgaccatgtgactttaca 438 ||| || || ||||| ||||| |||| |||||||||||||||||||||||||||| |||| Sbjct: 1204 tgacgattacttggagaaagtatcacaaaatggtgaatggggtgaccatgtgactctaca 1263 Query: 439 ggctgctgctgacaagtacggagtgaagattttcgtcatgacctcgttcaaggatacgtg 498 |||||||||||||||||| ||||| ||||||||||| ||||| ||||||||||||||||| Sbjct: 1264 ggctgctgctgacaagtatggagttaagattttcgtgatgacatcgttcaaggatacgtg 1323 Query: 499 ctacatcgagatccaacccaaggttcagaagtccaacaaagtggtgctattgagcttttg 558 |||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1324 ctacattgagatccaaccaaaggttcagaagtccaacaaagtggtgctgttgagcttttg 1383 Query: 559 ggcggaggttcactacaactcgatatttccacagaacgacgctccgaggttgcacacggc 618 ||||||||||||||||||||| |||| ||| |||||||| || ||||||| ||| ||| | Sbjct: 1384 ggcggaggttcactacaactccatatatccgcagaacgatgcgccgaggtcgcagacgac 1443 Query: 619 gaagaagaggagatggtggccgttctc 645 || |||||||||||||||||||||||| Sbjct: 1444 gaggaagaggagatggtggccgttctc 1470
>gb|AY106408.1| Zea mays PCO069200 mRNA sequence Length = 1098 Score = 569 bits (287), Expect = e-159 Identities = 512/587 (87%) Strand = Plus / Plus Query: 71 tgttttgaaatggaggaagaagtagagaagagattttaccccatggtcccagttcctcat 130 |||||||| |||||||| ||||||| |||||| ||||||||||||||||||||||| ||| Sbjct: 51 tgttttgagatggaggaggaagtagggaagaggttttaccccatggtcccagttccccat 110 Query: 131 gtccctaaaattaatggtgaaattccatcacttgacgaagccaccatggaccatgaaagg 190 ||||| ||||||||||| ||||| |||||| |||| |||||||| ||||||||||||||| Sbjct: 111 gtccccaaaattaatggagaaatcccatcaattgatgaagccactatggaccatgaaagg 170 Query: 191 ctgtccgacaggttgaggctgtatgaactaactgagaacaaggtgaagggtgatggcaat 250 ||| | || ||||||||||||||||| || ||| ||||||||||| || |||||||| Sbjct: 171 ctgacagaaaggttgaggctgtatgagctggttgaaaacaaggtgaaaggagatggcaac 230 Query: 251 tgtcagttccgtgcactatcagatcagctgtaccaaactccggaccaccatgagtttgtg 310 ||||||||||| ||||||||||||||||| ||||||| |||||| |||||||| |||||| Sbjct: 231 tgtcagttccgagcactatcagatcagctttaccaaagtccggatcaccatgaatttgtg 290 Query: 311 agggagcagataattagccagcttaaaagtaaccgggaagcctatgatggatatgtcccc 370 ||| ||||||||||| ||||||||||| |||||| || |||||||||||||| || ||| Sbjct: 291 aggtcgcagataattaaccagcttaaaactaaccgtgacgcctatgatggatacgttccc 350 Query: 371 atggcatatgatgagtatttggacaaagtctcacgaaatggtgaatggggtgaccatgtg 430 |||||||||||||| || ||||| ||||| |||| || | ||||||||||||||||| Sbjct: 351 atggcatatgatgattacttggagaaagttgcacggaacgtgcaatggggtgaccatgtg 410 Query: 431 actttacaggctgctgctgacaagtacggagtgaagattttcgtcatgacctcgttcaag 490 || | |||||||||||||||||||| ||||| || || ||||| ||||| ||||||||| Sbjct: 411 acgctgcaggctgctgctgacaagtatggagtaaaaatcttcgtgatgacatcgttcaag 470 Query: 491 gatacgtgctacatcgagatccaacccaaggttcagaagtccaacaaagtggtgctattg 550 ||||| |||||||||||||||| || |||||||||||||||||||||||| | || ||| Sbjct: 471 gatacttgctacatcgagatcctgcctaaggttcagaagtccaacaaagtgatactgttg 530 Query: 551 agcttttgggcggaggttcactacaactcgatatttccacagaacgacgctccgaggttg 610 ||||| ||||||||||| ||||||||||| ||| ||| |||||||| |||||||||| | Sbjct: 531 agcttctgggcggaggtgcactacaactccatacatccgcagaacgatgctccgaggtcg 590 Query: 611 cacacggcgaagaagaggagatggtggccgttctcacagcaccacca 657 || ||| | |||| ||| ||||||||||||||||| ||||||||||| Sbjct: 591 cagacgaccaagaggagaagatggtggccgttctcgcagcaccacca 637
>ref|XM_468428.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1884 Score = 305 bits (154), Expect = 1e-79 Identities = 283/326 (86%) Strand = Plus / Plus Query: 79 aatggaggaagaagtagagaagagattttaccccatggtcccagttcctcatgtccctaa 138 |||||| |||||||||| ||||| |||||||||||||| |||||||| ||||| ||||| Sbjct: 811 aatggatgaagaagtaggaaagaggttttaccccatggtgccagttccccatgttcctaa 870 Query: 139 aattaatggtgaaattccatcacttgacgaagccaccatggaccatgaaaggctgtccga 198 ||||||||| || || || ||| | || ||||| ||||||||||||||||||||| | || Sbjct: 871 aattaatggagagatcccttcagtcgatgaagctaccatggaccatgaaaggctgacaga 930 Query: 199 caggttgaggctgtatgaactaactgagaacaaggtgaagggtgatggcaattgtcagtt 258 ||||||||| ||||||||||| |||| |||||||||| || |||||||| |||||||| Sbjct: 931 aaggttgaggttgtatgaactagttgagcacaaggtgaaaggagatggcaactgtcagtt 990 Query: 259 ccgtgcactatcagatcagctgtaccaaactccggaccaccatgagtttgtgagggagca 318 || |||||||||||||| ||||| |||| ||| || |||||||||||||||||| |||| Sbjct: 991 tcgggcactatcagatcaactgtatcaaagtcccgatcaccatgagtttgtgaggcagca 1050 Query: 319 gataattagccagcttaaaagtaaccgggaagcctatgatggatatgtccccatggcata 378 ||| || |||||||||||||||||||| || ||||| ||||||||||||||||||||||| Sbjct: 1051 gattatgagccagcttaaaagtaaccgtgatgcctacgatggatatgtccccatggcata 1110 Query: 379 tgatgagtatttggacaaagtctcac 404 ||| || || ||||| ||||| |||| Sbjct: 1111 tgacgattacttggagaaagtatcac 1136 Score = 293 bits (148), Expect = 4e-76 Identities = 181/192 (94%) Strand = Plus / Plus Query: 405 gaaatggtgaatggggtgaccatgtgactttacaggctgctgctgacaagtacggagtga 464 ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| | Sbjct: 1152 gaaatggtgaatggggtgaccatgtgactctacaggctgctgctgacaagtatggagtta 1211 Query: 465 agattttcgtcatgacctcgttcaaggatacgtgctacatcgagatccaacccaaggttc 524 |||||||||| ||||| ||||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 1212 agattttcgtgatgacatcgttcaaggatacgtgctacattgagatccaaccaaaggttc 1271 Query: 525 agaagtccaacaaagtggtgctattgagcttttgggcggaggttcactacaactcgatat 584 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 1272 agaagtccaacaaagtggtgctgttgagcttttgggcggaggttcactacaactccatat 1331 Query: 585 ttccacagaacg 596 ||| ||||||| Sbjct: 1332 atccgcagaacg 1343 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 602 ccgaggttgcacacggcgaagaagaggagatggtggccgttctc 645 ||||||| ||| ||| ||| |||||||||||||||||||||||| Sbjct: 1411 ccgaggtcgcagacgacgaggaagaggagatggtggccgttctc 1454
>dbj|AK105997.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-H07, full insert sequence Length = 1884 Score = 305 bits (154), Expect = 1e-79 Identities = 283/326 (86%) Strand = Plus / Plus Query: 79 aatggaggaagaagtagagaagagattttaccccatggtcccagttcctcatgtccctaa 138 |||||| |||||||||| ||||| |||||||||||||| |||||||| ||||| ||||| Sbjct: 811 aatggatgaagaagtaggaaagaggttttaccccatggtgccagttccccatgttcctaa 870 Query: 139 aattaatggtgaaattccatcacttgacgaagccaccatggaccatgaaaggctgtccga 198 ||||||||| || || || ||| | || ||||| ||||||||||||||||||||| | || Sbjct: 871 aattaatggagagatcccttcagtcgatgaagctaccatggaccatgaaaggctgacaga 930 Query: 199 caggttgaggctgtatgaactaactgagaacaaggtgaagggtgatggcaattgtcagtt 258 ||||||||| ||||||||||| |||| |||||||||| || |||||||| |||||||| Sbjct: 931 aaggttgaggttgtatgaactagttgagcacaaggtgaaaggagatggcaactgtcagtt 990 Query: 259 ccgtgcactatcagatcagctgtaccaaactccggaccaccatgagtttgtgagggagca 318 || |||||||||||||| ||||| |||| ||| || |||||||||||||||||| |||| Sbjct: 991 tcgggcactatcagatcaactgtatcaaagtcccgatcaccatgagtttgtgaggcagca 1050 Query: 319 gataattagccagcttaaaagtaaccgggaagcctatgatggatatgtccccatggcata 378 ||| || |||||||||||||||||||| || ||||| ||||||||||||||||||||||| Sbjct: 1051 gattatgagccagcttaaaagtaaccgtgatgcctacgatggatatgtccccatggcata 1110 Query: 379 tgatgagtatttggacaaagtctcac 404 ||| || || ||||| ||||| |||| Sbjct: 1111 tgacgattacttggagaaagtatcac 1136 Score = 293 bits (148), Expect = 4e-76 Identities = 181/192 (94%) Strand = Plus / Plus Query: 405 gaaatggtgaatggggtgaccatgtgactttacaggctgctgctgacaagtacggagtga 464 ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| | Sbjct: 1152 gaaatggtgaatggggtgaccatgtgactctacaggctgctgctgacaagtatggagtta 1211 Query: 465 agattttcgtcatgacctcgttcaaggatacgtgctacatcgagatccaacccaaggttc 524 |||||||||| ||||| ||||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 1212 agattttcgtgatgacatcgttcaaggatacgtgctacattgagatccaaccaaaggttc 1271 Query: 525 agaagtccaacaaagtggtgctattgagcttttgggcggaggttcactacaactcgatat 584 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 1272 agaagtccaacaaagtggtgctgttgagcttttgggcggaggttcactacaactccatat 1331 Query: 585 ttccacagaacg 596 ||| ||||||| Sbjct: 1332 atccgcagaacg 1343 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 602 ccgaggttgcacacggcgaagaagaggagatggtggccgttctc 645 ||||||| ||| ||| ||| |||||||||||||||||||||||| Sbjct: 1411 ccgaggtcgcagacgacgaggaagaggagatggtggccgttctc 1454
>dbj|AK058926.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-C03, full insert sequence Length = 1080 Score = 291 bits (147), Expect = 2e-75 Identities = 228/255 (89%) Strand = Plus / Plus Query: 200 aggttgaggctgtatgaactaactgagaacaaggtgaagggtgatggcaattgtcagttc 259 ||||||||| ||||||||||| |||| |||||||||| || |||||||| |||||||| Sbjct: 48 aggttgaggttgtatgaactagttgagcacaaggtgaaaggagatggcaactgtcagttt 107 Query: 260 cgtgcactatcagatcagctgtaccaaactccggaccaccatgagtttgtgagggagcag 319 || |||||||||||||| ||||| |||| ||| || |||||||||||||||||| ||||| Sbjct: 108 cgggcactatcagatcaactgtatcaaagtcccgatcaccatgagtttgtgaggcagcag 167 Query: 320 ataattagccagcttaaaagtaaccgggaagcctatgatggatatgtccccatggcatat 379 || || |||||||||||||||||||| || ||||| |||||||||||||||||||||||| Sbjct: 168 attatgagccagcttaaaagtaaccgtgatgcctacgatggatatgtccccatggcatat 227 Query: 380 gatgagtatttggacaaagtctcacgaaatggtgaatggggtgaccatgtgactttacag 439 || || || ||||| ||||| |||| |||||||||||||||||||||||||||| ||||| Sbjct: 228 gacgattacttggagaaagtatcacaaaatggtgaatggggtgaccatgtgactctacag 287 Query: 440 gctgctgctgacaag 454 ||||||||||||||| Sbjct: 288 gctgctgctgacaag 302 Score = 198 bits (100), Expect = 2e-47 Identities = 133/144 (92%) Strand = Plus / Plus Query: 453 agtacggagtgaagattttcgtcatgacctcgttcaaggatacgtgctacatcgagatcc 512 |||| ||||| ||||||||||| ||||| ||||||||||||||||||||||| | ||||| Sbjct: 420 agtatggagttaagattttcgtgatgacatcgttcaaggatacgtgctacattgggatcc 479 Query: 513 aacccaaggttcagaagtccaacaaagtggtgctattgagcttttgggcggaggttcact 572 |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 480 aaccaaaggttcagaagtccaacaaagtggtgctgttgagcttttgggcggaggttcact 539 Query: 573 acaactcgatatttccacagaacg 596 ||||||| |||| ||| ||||||| Sbjct: 540 acaactccatatatccgcagaacg 563 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 602 ccgaggttgcacacggcgaagaagaggagatggtggccgttctc 645 ||||||| ||| ||| ||| |||||||||||||||||||||||| Sbjct: 631 ccgaggtcgcagacgacgaggaagaggagatggtggccgttctc 674
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 125 bits (63), Expect = 2e-25 Identities = 81/87 (93%) Strand = Plus / Minus Query: 453 agtacggagtgaagattttcgtcatgacctcgttcaaggatacgtgctacatcgagatcc 512 |||| ||||| ||||||||||| ||||| ||||||||||||||||||||||| ||||||| Sbjct: 35198519 agtatggagttaagattttcgtgatgacatcgttcaaggatacgtgctacattgagatcc 35198460 Query: 513 aacccaaggttcagaagtccaacaaag 539 |||| |||||||||||||||||||||| Sbjct: 35198459 aaccaaaggttcagaagtccaacaaag 35198433 Score = 91.7 bits (46), Expect = 3e-15 Identities = 49/50 (98%) Strand = Plus / Minus Query: 405 gaaatggtgaatggggtgaccatgtgactttacaggctgctgctgacaag 454 ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 35198686 gaaatggtgaatggggtgaccatgtgactctacaggctgctgctgacaag 35198637 Score = 89.7 bits (45), Expect = 1e-14 Identities = 69/77 (89%) Strand = Plus / Minus Query: 328 ccagcttaaaagtaaccgggaagcctatgatggatatgtccccatggcatatgatgagta 387 |||||||||||||||||| || ||||| |||||||||||||||||||||||||| || || Sbjct: 35198857 ccagcttaaaagtaaccgtgatgcctacgatggatatgtccccatggcatatgacgatta 35198798 Query: 388 tttggacaaagtctcac 404 ||||| ||||| |||| Sbjct: 35198797 cttggagaaagtatcac 35198781 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Minus Query: 538 agtggtgctattgagcttttgggcggaggttcactacaactcgatatttccacagaacg 596 ||||||||| |||||||||||||||||||||||||||||||| |||| ||| ||||||| Sbjct: 35198334 agtggtgctgttgagcttttgggcggaggttcactacaactccatatatccgcagaacg 35198276 Score = 75.8 bits (38), Expect = 2e-10 Identities = 68/78 (87%) Strand = Plus / Minus Query: 254 cagttccgtgcactatcagatcagctgtaccaaactccggaccaccatgagtttgtgagg 313 ||||| || |||||||||||||| ||||| |||| ||| || |||||||||||||||||| Sbjct: 35199031 cagtttcgggcactatcagatcaactgtatcaaagtcccgatcaccatgagtttgtgagg 35198972 Query: 314 gagcagataattagccag 331 ||||||| || |||||| Sbjct: 35198971 cagcagattatgagccag 35198954 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Minus Query: 128 catgtccctaaaattaatggtgaaattccatcacttgacgaagccaccatggaccatgaa 187 ||||| |||||||||||||| || || || ||| | || ||||| ||||||||||||||| Sbjct: 35199647 catgttcctaaaattaatggagagatcccttcagtcgatgaagctaccatggaccatgaa 35199588 Query: 188 aggctg 193 |||||| Sbjct: 35199587 aggctg 35199582 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 200 aggttgaggctgtatgaactaactgagaacaaggtgaagggtgatggcaattgtcag 256 ||||||||| ||||||||||| |||| |||||||||| || |||||||| |||||| Sbjct: 35199351 aggttgaggttgtatgaactagttgagcacaaggtgaaaggagatggcaactgtcag 35199295 Score = 56.0 bits (28), Expect = 2e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 79 aatggaggaagaagtagagaagagattttaccccatggtcccagttcc 126 |||||| |||||||||| ||||| |||||||||||||| |||||||| Sbjct: 35200494 aatggatgaagaagtaggaaagaggttttaccccatggtgccagttcc 35200447 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 602 ccgaggttgcacacggcgaagaagaggagatggtggccgttctc 645 ||||||| ||| ||| ||| |||||||||||||||||||||||| Sbjct: 35198113 ccgaggtcgcagacgacgaggaagaggagatggtggccgttctc 35198070
>dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0474F11 Length = 139544 Score = 125 bits (63), Expect = 2e-25 Identities = 81/87 (93%) Strand = Plus / Minus Query: 453 agtacggagtgaagattttcgtcatgacctcgttcaaggatacgtgctacatcgagatcc 512 |||| ||||| ||||||||||| ||||| ||||||||||||||||||||||| ||||||| Sbjct: 10569 agtatggagttaagattttcgtgatgacatcgttcaaggatacgtgctacattgagatcc 10510 Query: 513 aacccaaggttcagaagtccaacaaag 539 |||| |||||||||||||||||||||| Sbjct: 10509 aaccaaaggttcagaagtccaacaaag 10483 Score = 91.7 bits (46), Expect = 3e-15 Identities = 49/50 (98%) Strand = Plus / Minus Query: 405 gaaatggtgaatggggtgaccatgtgactttacaggctgctgctgacaag 454 ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 10736 gaaatggtgaatggggtgaccatgtgactctacaggctgctgctgacaag 10687 Score = 89.7 bits (45), Expect = 1e-14 Identities = 69/77 (89%) Strand = Plus / Minus Query: 328 ccagcttaaaagtaaccgggaagcctatgatggatatgtccccatggcatatgatgagta 387 |||||||||||||||||| || ||||| |||||||||||||||||||||||||| || || Sbjct: 10907 ccagcttaaaagtaaccgtgatgcctacgatggatatgtccccatggcatatgacgatta 10848 Query: 388 tttggacaaagtctcac 404 ||||| ||||| |||| Sbjct: 10847 cttggagaaagtatcac 10831 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Minus Query: 538 agtggtgctattgagcttttgggcggaggttcactacaactcgatatttccacagaacg 596 ||||||||| |||||||||||||||||||||||||||||||| |||| ||| ||||||| Sbjct: 10384 agtggtgctgttgagcttttgggcggaggttcactacaactccatatatccgcagaacg 10326 Score = 75.8 bits (38), Expect = 2e-10 Identities = 68/78 (87%) Strand = Plus / Minus Query: 254 cagttccgtgcactatcagatcagctgtaccaaactccggaccaccatgagtttgtgagg 313 ||||| || |||||||||||||| ||||| |||| ||| || |||||||||||||||||| Sbjct: 11081 cagtttcgggcactatcagatcaactgtatcaaagtcccgatcaccatgagtttgtgagg 11022 Query: 314 gagcagataattagccag 331 ||||||| || |||||| Sbjct: 11021 cagcagattatgagccag 11004 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Minus Query: 128 catgtccctaaaattaatggtgaaattccatcacttgacgaagccaccatggaccatgaa 187 ||||| |||||||||||||| || || || ||| | || ||||| ||||||||||||||| Sbjct: 11697 catgttcctaaaattaatggagagatcccttcagtcgatgaagctaccatggaccatgaa 11638 Query: 188 aggctg 193 |||||| Sbjct: 11637 aggctg 11632 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 200 aggttgaggctgtatgaactaactgagaacaaggtgaagggtgatggcaattgtcag 256 ||||||||| ||||||||||| |||| |||||||||| || |||||||| |||||| Sbjct: 11401 aggttgaggttgtatgaactagttgagcacaaggtgaaaggagatggcaactgtcag 11345 Score = 56.0 bits (28), Expect = 2e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 79 aatggaggaagaagtagagaagagattttaccccatggtcccagttcc 126 |||||| |||||||||| ||||| |||||||||||||| |||||||| Sbjct: 12544 aatggatgaagaagtaggaaagaggttttaccccatggtgccagttcc 12497 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 602 ccgaggttgcacacggcgaagaagaggagatggtggccgttctc 645 ||||||| ||| ||| ||| |||||||||||||||||||||||| Sbjct: 10163 ccgaggtcgcagacgacgaggaagaggagatggtggccgttctc 10120
>dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1202_E07 Length = 145014 Score = 125 bits (63), Expect = 2e-25 Identities = 81/87 (93%) Strand = Plus / Minus Query: 453 agtacggagtgaagattttcgtcatgacctcgttcaaggatacgtgctacatcgagatcc 512 |||| ||||| ||||||||||| ||||| ||||||||||||||||||||||| ||||||| Sbjct: 93875 agtatggagttaagattttcgtgatgacatcgttcaaggatacgtgctacattgagatcc 93816 Query: 513 aacccaaggttcagaagtccaacaaag 539 |||| |||||||||||||||||||||| Sbjct: 93815 aaccaaaggttcagaagtccaacaaag 93789 Score = 91.7 bits (46), Expect = 3e-15 Identities = 49/50 (98%) Strand = Plus / Minus Query: 405 gaaatggtgaatggggtgaccatgtgactttacaggctgctgctgacaag 454 ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 94042 gaaatggtgaatggggtgaccatgtgactctacaggctgctgctgacaag 93993 Score = 89.7 bits (45), Expect = 1e-14 Identities = 69/77 (89%) Strand = Plus / Minus Query: 328 ccagcttaaaagtaaccgggaagcctatgatggatatgtccccatggcatatgatgagta 387 |||||||||||||||||| || ||||| |||||||||||||||||||||||||| || || Sbjct: 94213 ccagcttaaaagtaaccgtgatgcctacgatggatatgtccccatggcatatgacgatta 94154 Query: 388 tttggacaaagtctcac 404 ||||| ||||| |||| Sbjct: 94153 cttggagaaagtatcac 94137 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Minus Query: 538 agtggtgctattgagcttttgggcggaggttcactacaactcgatatttccacagaacg 596 ||||||||| |||||||||||||||||||||||||||||||| |||| ||| ||||||| Sbjct: 93690 agtggtgctgttgagcttttgggcggaggttcactacaactccatatatccgcagaacg 93632 Score = 75.8 bits (38), Expect = 2e-10 Identities = 68/78 (87%) Strand = Plus / Minus Query: 254 cagttccgtgcactatcagatcagctgtaccaaactccggaccaccatgagtttgtgagg 313 ||||| || |||||||||||||| ||||| |||| ||| || |||||||||||||||||| Sbjct: 94387 cagtttcgggcactatcagatcaactgtatcaaagtcccgatcaccatgagtttgtgagg 94328 Query: 314 gagcagataattagccag 331 ||||||| || |||||| Sbjct: 94327 cagcagattatgagccag 94310 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Minus Query: 128 catgtccctaaaattaatggtgaaattccatcacttgacgaagccaccatggaccatgaa 187 ||||| |||||||||||||| || || || ||| | || ||||| ||||||||||||||| Sbjct: 95003 catgttcctaaaattaatggagagatcccttcagtcgatgaagctaccatggaccatgaa 94944 Query: 188 aggctg 193 |||||| Sbjct: 94943 aggctg 94938 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 200 aggttgaggctgtatgaactaactgagaacaaggtgaagggtgatggcaattgtcag 256 ||||||||| ||||||||||| |||| |||||||||| || |||||||| |||||| Sbjct: 94707 aggttgaggttgtatgaactagttgagcacaaggtgaaaggagatggcaactgtcag 94651 Score = 56.0 bits (28), Expect = 2e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 79 aatggaggaagaagtagagaagagattttaccccatggtcccagttcc 126 |||||| |||||||||| ||||| |||||||||||||| |||||||| Sbjct: 95850 aatggatgaagaagtaggaaagaggttttaccccatggtgccagttcc 95803 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 602 ccgaggttgcacacggcgaagaagaggagatggtggccgttctc 645 ||||||| ||| ||| ||| |||||||||||||||||||||||| Sbjct: 93469 ccgaggtcgcagacgacgaggaagaggagatggtggccgttctc 93426
>ref|XM_472373.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 576 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 242 gatggcaattgtcagttccgtgcactatcagatcagct 279 |||||||||||||||||||||||||||||||| ||||| Sbjct: 283 gatggcaattgtcagttccgtgcactatcagaccagct 320 Score = 44.1 bits (22), Expect = 0.59 Identities = 37/42 (88%) Strand = Plus / Plus Query: 409 tggtgaatggggtgaccatgtgactttacaggctgctgctga 450 |||||||||||| |||||||| || || || ||||||||||| Sbjct: 450 tggtgaatggggcgaccatgtcacattgcaagctgctgctga 491
>gb|AY109494.1| Zea mays CL9836_1 mRNA sequence Length = 1122 Score = 56.0 bits (28), Expect = 2e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 408 atggtgaatggggtgaccatgtgactttacaggctgctgctgacaagt 455 |||||||||||||||||||||| || |||| || ||||||||||||| Sbjct: 570 atggtgaatggggtgaccatgtcacgctacaagcagctgctgacaagt 523 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 239 ggtgatggcaattgtcagttccgtgcactatcaga 273 |||||||| ||||||||||| |||||||| ||||| Sbjct: 739 ggtgatggaaattgtcagtttcgtgcactctcaga 705
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 548 ttgagcttttgggcggaggttcactacaactcgatatttcca 589 ||||| |||||||| ||||| |||||||||||||||| |||| Sbjct: 35982961 ttgagtttttgggctgaggtgcactacaactcgatatatcca 35982920
>gb|AC092263.7| Oryza sativa chromosome 3 BAC OSJNBa0033P04 genomic sequence, complete sequence Length = 164179 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 548 ttgagcttttgggcggaggttcactacaactcgatatttcca 589 ||||| |||||||| ||||| |||||||||||||||| |||| Sbjct: 44472 ttgagtttttgggctgaggtgcactacaactcgatatatcca 44431
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 548 ttgagcttttgggcggaggttcactacaactcgatatttcca 589 ||||| |||||||| ||||| |||||||||||||||| |||| Sbjct: 36073035 ttgagtttttgggctgaggtgcactacaactcgatatatcca 36072994
>dbj|AK071971.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013087H17, full insert sequence Length = 1342 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 548 ttgagcttttgggcggaggttcactacaactcgatatttcca 589 ||||| |||||||| ||||| |||||||||||||||| |||| Sbjct: 939 ttgagtttttgggctgaggtgcactacaactcgatatatcca 980 Score = 42.1 bits (21), Expect = 2.3 Identities = 72/89 (80%) Strand = Plus / Plus Query: 416 tggggtgaccatgtgactttacaggctgctgctgacaagtacggagtgaagattttcgtc 475 ||||||||||| || || || ||||||||||| ||| ||| || || ||||||||| || Sbjct: 807 tggggtgaccacgttacattgcaggctgctgcagactcgtatggtgtaaagattttcatc 866 Query: 476 atgacctcgttcaaggatacgtgctacat 504 |||| || |||| ||||| |||||||| Sbjct: 867 ctgacatcattcagagatacttgctacat 895 Score = 42.1 bits (21), Expect = 2.3 Identities = 56/65 (86%), Gaps = 2/65 (3%) Strand = Plus / Plus Query: 198 acaggttgaggctgtatgaactaactgagaacaaggt-gaagggtgatggcaattgtcag 256 |||||||| ||||||||| || ||||| |||||| |||||| ||||||||||||||| Sbjct: 589 acaggttggagctgtatgatcttgctgagctcaaggttgaaggg-gatggcaattgtcag 647 Query: 257 ttccg 261 ||||| Sbjct: 648 ttccg 652
>dbj|AK062741.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-F03, full insert sequence Length = 696 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 548 ttgagcttttgggcggaggttcactacaactcgatatttcca 589 ||||| |||||||| ||||| |||||||||||||||| |||| Sbjct: 373 ttgagtttttgggctgaggtgcactacaactcgatatatcca 414 Score = 42.1 bits (21), Expect = 2.3 Identities = 72/89 (80%) Strand = Plus / Plus Query: 416 tggggtgaccatgtgactttacaggctgctgctgacaagtacggagtgaagattttcgtc 475 ||||||||||| || || || ||||||||||| ||| ||| || || ||||||||| || Sbjct: 241 tggggtgaccacgttacattgcaggctgctgcagactcgtatggtgtaaagattttcatc 300 Query: 476 atgacctcgttcaaggatacgtgctacat 504 |||| || |||| ||||| |||||||| Sbjct: 301 ctgacatcattcagagatacttgctacat 329 Score = 42.1 bits (21), Expect = 2.3 Identities = 56/65 (86%), Gaps = 2/65 (3%) Strand = Plus / Plus Query: 198 acaggttgaggctgtatgaactaactgagaacaaggt-gaagggtgatggcaattgtcag 256 |||||||| ||||||||| || ||||| |||||| |||||| ||||||||||||||| Sbjct: 23 acaggttggagctgtatgatcttgctgagctcaaggttgaaggg-gatggcaattgtcag 81 Query: 257 ttccg 261 ||||| Sbjct: 82 ttccg 86
>gb|DQ430260.1| Sorghum propinquum locus pSB1846 genomic sequence Length = 747 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Plus Query: 548 ttgagcttttgggcggaggttcactacaactcgatat 584 ||||| |||||||| ||||| |||||||||||||||| Sbjct: 234 ttgagtttttgggctgaggtgcactacaactcgatat 270
>gb|DQ430259.1| Sorghum bicolor voucher PI585454 locus pSB1846 genomic sequence Length = 747 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Plus Query: 548 ttgagcttttgggcggaggttcactacaactcgatat 584 ||||| |||||||| ||||| |||||||||||||||| Sbjct: 234 ttgagtttttgggctgaggtgcactacaactcgatat 270
>gb|DQ430258.1| Sorghum bicolor voucher PI267408 locus pSB1846 genomic sequence Length = 747 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Plus Query: 548 ttgagcttttgggcggaggttcactacaactcgatat 584 ||||| |||||||| ||||| |||||||||||||||| Sbjct: 234 ttgagtttttgggctgaggtgcactacaactcgatat 270
>gb|DQ430257.1| Sorghum bicolor voucher PI221607 locus pSB1846 genomic sequence Length = 747 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Plus Query: 548 ttgagcttttgggcggaggttcactacaactcgatat 584 ||||| |||||||| ||||| |||||||||||||||| Sbjct: 234 ttgagtttttgggctgaggtgcactacaactcgatat 270
>gb|DQ430256.1| Sorghum bicolor voucher PI152702 locus pSB1846 genomic sequence Length = 747 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Plus Query: 548 ttgagcttttgggcggaggttcactacaactcgatat 584 ||||| |||||||| ||||| |||||||||||||||| Sbjct: 234 ttgagtttttgggctgaggtgcactacaactcgatat 270
>gb|DQ430255.1| Sorghum bicolor voucher NSL87902b locus pSB1846 genomic sequence Length = 747 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Plus Query: 548 ttgagcttttgggcggaggttcactacaactcgatat 584 ||||| |||||||| ||||| |||||||||||||||| Sbjct: 234 ttgagtttttgggctgaggtgcactacaactcgatat 270
>gb|DQ430254.1| Sorghum bicolor voucher NSL87902a locus pSB1846 genomic sequence Length = 747 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Plus Query: 548 ttgagcttttgggcggaggttcactacaactcgatat 584 ||||| |||||||| ||||| |||||||||||||||| Sbjct: 234 ttgagtttttgggctgaggtgcactacaactcgatat 270
>gb|DQ430253.1| Sorghum bicolor voucher NSL87666 locus pSB1846 genomic sequence Length = 747 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Plus Query: 548 ttgagcttttgggcggaggttcactacaactcgatat 584 ||||| |||||||| ||||| |||||||||||||||| Sbjct: 234 ttgagtttttgggctgaggtgcactacaactcgatat 270
>gb|DQ430252.1| Sorghum bicolor voucher NSL77217 locus pSB1846 genomic sequence Length = 747 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Plus Query: 548 ttgagcttttgggcggaggttcactacaactcgatat 584 ||||| |||||||| ||||| |||||||||||||||| Sbjct: 234 ttgagtttttgggctgaggtgcactacaactcgatat 270
>gb|DQ430251.1| Sorghum bicolor voucher NSL77034 locus pSB1846 genomic sequence Length = 747 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Plus Query: 548 ttgagcttttgggcggaggttcactacaactcgatat 584 ||||| |||||||| ||||| |||||||||||||||| Sbjct: 234 ttgagtttttgggctgaggtgcactacaactcgatat 270
>gb|DQ430250.1| Sorghum bicolor voucher NSL56174 locus pSB1846 genomic sequence Length = 747 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Plus Query: 548 ttgagcttttgggcggaggttcactacaactcgatat 584 ||||| |||||||| ||||| |||||||||||||||| Sbjct: 234 ttgagtttttgggctgaggtgcactacaactcgatat 270
>gb|DQ430249.1| Sorghum bicolor voucher NSL56003 locus pSB1846 genomic sequence Length = 747 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Plus Query: 548 ttgagcttttgggcggaggttcactacaactcgatat 584 ||||| |||||||| ||||| |||||||||||||||| Sbjct: 234 ttgagtttttgggctgaggtgcactacaactcgatat 270
>gb|DQ430248.1| Sorghum bicolor voucher NSL55243 locus pSB1846 genomic sequence Length = 747 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Plus Query: 548 ttgagcttttgggcggaggttcactacaactcgatat 584 ||||| |||||||| ||||| |||||||||||||||| Sbjct: 234 ttgagtttttgggctgaggtgcactacaactcgatat 270
>gb|DQ430247.1| Sorghum bicolor voucher NSL51365 locus pSB1846 genomic sequence Length = 747 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Plus Query: 548 ttgagcttttgggcggaggttcactacaactcgatat 584 ||||| |||||||| ||||| |||||||||||||||| Sbjct: 234 ttgagtttttgggctgaggtgcactacaactcgatat 270
>gb|DQ430246.1| Sorghum bicolor voucher NSL51030 locus pSB1846 genomic sequence Length = 747 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Plus Query: 548 ttgagcttttgggcggaggttcactacaactcgatat 584 ||||| |||||||| ||||| |||||||||||||||| Sbjct: 234 ttgagtttttgggctgaggtgcactacaactcgatat 270
>gb|DQ430245.1| Sorghum bicolor voucher BTx623 locus pSB1846 genomic sequence Length = 747 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Plus Query: 548 ttgagcttttgggcggaggttcactacaactcgatat 584 ||||| |||||||| ||||| |||||||||||||||| Sbjct: 234 ttgagtttttgggctgaggtgcactacaactcgatat 270
>gb|AY106393.1| Zea mays PCO117653 mRNA sequence Length = 1006 Score = 48.1 bits (24), Expect = 0.038 Identities = 36/40 (90%) Strand = Plus / Plus Query: 413 gaatggggtgaccatgtgactttacaggctgctgctgaca 452 ||||||||||| |||||||| |||||||| ||||| |||| Sbjct: 592 gaatggggtgatcatgtgaccttacaggcagctgcagaca 631
>ref|NM_104075.2| Arabidopsis thaliana kinase AT1G51940 mRNA, complete cds Length = 2296 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 83 gaggaagaagtagagaagagat 104 |||||||||||||||||||||| Sbjct: 31 gaggaagaagtagagaagagat 10
>emb|AL607005.3|OSJN00124 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0118P14, complete sequence Length = 158312 Score = 44.1 bits (22), Expect = 0.59 Identities = 37/42 (88%) Strand = Plus / Plus Query: 409 tggtgaatggggtgaccatgtgactttacaggctgctgctga 450 |||||||||||| |||||||| || || || ||||||||||| Sbjct: 7427 tggtgaatggggcgaccatgtcacattgcaagctgctgctga 7468 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 255 agttccgtgcactatcagatcagct 279 ||||||||||||||||||| ||||| Sbjct: 6924 agttccgtgcactatcagaccagct 6948
>emb|AL606610.3|OSJN00045 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0012E08, complete sequence Length = 106975 Score = 44.1 bits (22), Expect = 0.59 Identities = 37/42 (88%) Strand = Plus / Plus Query: 409 tggtgaatggggtgaccatgtgactttacaggctgctgctga 450 |||||||||||| |||||||| || || || ||||||||||| Sbjct: 99572 tggtgaatggggcgaccatgtcacattgcaagctgctgctga 99613 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 255 agttccgtgcactatcagatcagct 279 ||||||||||||||||||| ||||| Sbjct: 99069 agttccgtgcactatcagaccagct 99093
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.59 Identities = 37/42 (88%) Strand = Plus / Plus Query: 409 tggtgaatggggtgaccatgtgactttacaggctgctgctga 450 |||||||||||| |||||||| || || || ||||||||||| Sbjct: 19944764 tggtgaatggggcgaccatgtcacattgcaagctgctgctga 19944805 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 255 agttccgtgcactatcagatcagct 279 ||||||||||||||||||| ||||| Sbjct: 19944261 agttccgtgcactatcagaccagct 19944285
>emb|BX816305.1|CNS0AARQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH3ZG08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2295 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 83 gaggaagaagtagagaagagat 104 |||||||||||||||||||||| Sbjct: 31 gaggaagaagtagagaagagat 10
>gb|AC015448.4|AC015448 Arabidopsis thaliana chromosome I BAC T14L22 genomic sequence, complete sequence Length = 95581 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 83 gaggaagaagtagagaagagat 104 |||||||||||||||||||||| Sbjct: 76767 gaggaagaagtagagaagagat 76788
>gb|BC083682.1| Rattus norvegicus cDNA clone IMAGE:7135906 Length = 1450 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 144 atggtgaaattccatcacttg 164 ||||||||||||||||||||| Sbjct: 875 atggtgaaattccatcacttg 855
>gb|BC098950.1| Rattus norvegicus cDNA clone IMAGE:7135924 Length = 1441 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 144 atggtgaaattccatcacttg 164 ||||||||||||||||||||| Sbjct: 931 atggtgaaattccatcacttg 911
>dbj|AK073551.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044I12, full insert sequence Length = 1227 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 237 agggtgatggcaattgtcagttccg 261 |||||||||| |||||||||||||| Sbjct: 467 agggtgatggaaattgtcagttccg 491
>ref|XM_459949.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0E15389g) partial mRNA Length = 507 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 ttttgaaatggaggaagaag 92 |||||||||||||||||||| Sbjct: 297 ttttgaaatggaggaagaag 316
>ref|XM_453215.1| Kluyveromyces lactis NRRL Y-1140, KLLA0D03344g predicted mRNA Length = 1713 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 atgatgagtatttggacaaa 397 |||||||||||||||||||| Sbjct: 650 atgatgagtatttggacaaa 669
>gb|AC114484.2| Homo sapiens chromosome 1 clone RP4-615B18, complete sequence Length = 118763 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 catggcatatgatgagtatt 389 |||||||||||||||||||| Sbjct: 96447 catggcatatgatgagtatt 96466
>emb|AL355608.11| Human DNA sequence from clone RP11-567J2 on chromosome 9 Contains part of the ASTN2 gene for astrotactin 2 (KIAA0634) and a novel gene similar to ribosomal protein L10 (RPL10), complete sequence Length = 132590 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 ctaaaattaatggtgaaatt 154 |||||||||||||||||||| Sbjct: 123429 ctaaaattaatggtgaaatt 123410
>emb|AL157407.11| Human DNA sequence from clone RP4-609E1 on chromosome 1p31.2-32.1 Contains the ARHI gene for ras homolog gene family member I, part of a novel gene (FLJ38762), ADP-ribosylation factor-like 5 (ARL5) pseudogene and the 3' end of a putative NFkB activating protein 373, complete sequence Length = 142396 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 agtagagaagagattttacc 110 |||||||||||||||||||| Sbjct: 123293 agtagagaagagattttacc 123312
>emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS767 of Debaryomyces hansenii Length = 2037969 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 ttttgaaatggaggaagaag 92 |||||||||||||||||||| Sbjct: 1178414 ttttgaaatggaggaagaag 1178433
>emb|CR382124.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1715506 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 atgatgagtatttggacaaa 397 |||||||||||||||||||| Sbjct: 280301 atgatgagtatttggacaaa 280320
>emb|AL611951.11| Mouse DNA sequence from clone RP23-265O1 on chromosome 13 Contains a novel gene, complete sequence Length = 191715 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 catgagtttgtgagggagca 318 |||||||||||||||||||| Sbjct: 107549 catgagtttgtgagggagca 107530
>gb|AC148340.3| Medicago truncatula chromosome 2 BAC clone mth2-22d10, complete sequence Length = 105618 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 650 caccaccattgatgaggctctctt 673 ||||||||||||||| |||||||| Sbjct: 68806 caccaccattgatgatgctctctt 68829
>emb|BX255940.4| Zebrafish DNA sequence from clone DKEY-3P8 in linkage group 20, complete sequence Length = 211261 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 gttttgaaatggaggaagaa 91 |||||||||||||||||||| Sbjct: 134078 gttttgaaatggaggaagaa 134059
>emb|CR848279.2| Xenopus tropicalis finished cDNA, clone TNeu062n02 Length = 1274 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 302 gagtttgtgagggagcagat 321 |||||||||||||||||||| Sbjct: 65 gagtttgtgagggagcagat 84
>emb|AL928694.3| Human DNA sequence from clone RP11-460A16 on chromosome 1, complete sequence Length = 26869 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 agtagagaagagattttacc 110 |||||||||||||||||||| Sbjct: 19081 agtagagaagagattttacc 19062
>gb|AC011332.8| Homo sapiens chromosome 5 clone CTC-222D7, complete sequence Length = 144820 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 415 atggggtgaccatgtgactttaca 438 |||| ||||||||||||||||||| Sbjct: 86859 atggtgtgaccatgtgactttaca 86882 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,686,298 Number of Sequences: 3902068 Number of extensions: 5686298 Number of successful extensions: 106338 Number of sequences better than 10.0: 57 Number of HSP's better than 10.0 without gapping: 57 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 106118 Number of HSP's gapped (non-prelim): 219 length of query: 675 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 652 effective length of database: 17,143,297,704 effective search space: 11177430103008 effective search space used: 11177430103008 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)