ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd20a06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY137242.1| Oryza sativa (japonica cultivar-group) sucrose transporter SUT2 mRNA, complete cds Length = 1830 Score = 525 bits (265), Expect = e-146 Identities = 449/509 (88%), Gaps = 1/509 (0%) Strand = Plus / Plus Query: 8 ctaggaatagacc-tgccatggcgtccttcatttggctttgtgggcctattactggtttt 66 ||||||||||||| ||||||||| || ||||||||||||||||| ||||||||||||||| Sbjct: 302 ctaggaatagaccatgccatggcatcattcatttggctttgtggacctattactggtttt 361 Query: 67 gtcgttcaaccttgtgttggagtctggagcgacaaatgccgctccaagtacgggaggaga 126 || |||||||| |||||||| |||||||| ||||||||||| || ||||| || || || Sbjct: 362 gtggttcaaccatgtgttggtgtctggagtgacaaatgccgttcaaagtatggaagaagg 421 Query: 127 cgacccttcattctcgctggatgcgtgctgatatgtgcagctgtaactttagtcgggttt 186 |||| |||||| | ||||||||| || ||||||| |||||||||||| |||| ||| Sbjct: 422 agaccgttcattttggctggatgcttgatgatatgctttgctgtaactttaatcggattt 481 Query: 187 tctgcagaccttggttacatgttaggagataccaccgagcactgcagtacgtacaaaggt 246 |||||||||||||||||||| |||||||||||||| |||||||||||||| || |||||| Sbjct: 482 tctgcagaccttggttacattttaggagataccactgagcactgcagtacatataaaggt 541 Query: 247 ctaagatatcgagctgctattatcttcattcttggattctggatgttggacctggcaaac 306 ||||| |||||| |||||||| ||| ||||||| |||||||||||||| || |||||| Sbjct: 542 tcaagatttcgagcagctattattttcgttcttgggttctggatgttggatctcgcaaac 601 Query: 307 aatacagtgcaaggacctgcccgtgcccttctagccgatctttcaggtcctgatcaatgt 366 |||||||| ||||| ||||| ||||||||| |||| || ||||||||||||||||| ||| Sbjct: 602 aatacagttcaaggtcctgctcgtgcccttttagctgacctttcaggtcctgatcagtgt 661 Query: 367 aattcagcaaatgcgatattctgctcatggatggctgtcggaaatgtacttggtttttca 426 ||||| |||||||| || || ||| ||||||||||||| ||||| || |||||||||||| Sbjct: 662 aattctgcaaatgcaattttttgcacatggatggctgttggaaacgttcttggtttttca 721 Query: 427 gctggtgcgagtgggaattggcacaagtggtttccttttctaatgacaagagcctgctgt 486 ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 722 tctggtgctagtgggaattggcacaagtggtttccttttctaatgacaagagcatgctgt 781 Query: 487 gaagcttgtggtaacttgaaagcagcttt 515 ||||||||| |||| |||||||| ||||| Sbjct: 782 gaagcttgtagtaatttgaaagccgcttt 810
>dbj|AK065430.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023D24, full insert sequence Length = 2558 Score = 525 bits (265), Expect = e-146 Identities = 449/509 (88%), Gaps = 1/509 (0%) Strand = Plus / Plus Query: 8 ctaggaatagacc-tgccatggcgtccttcatttggctttgtgggcctattactggtttt 66 ||||||||||||| ||||||||| || ||||||||||||||||| ||||||||||||||| Sbjct: 547 ctaggaatagaccatgccatggcatcattcatttggctttgtggacctattactggtttt 606 Query: 67 gtcgttcaaccttgtgttggagtctggagcgacaaatgccgctccaagtacgggaggaga 126 || |||||||| |||||||| |||||||| ||||||||||| || ||||| || || || Sbjct: 607 gtggttcaaccatgtgttggtgtctggagtgacaaatgccgttcaaagtatggaagaagg 666 Query: 127 cgacccttcattctcgctggatgcgtgctgatatgtgcagctgtaactttagtcgggttt 186 |||| |||||| | ||||||||| || ||||||| |||||||||||| |||| ||| Sbjct: 667 agaccgttcattttggctggatgcttgatgatatgctttgctgtaactttaatcggattt 726 Query: 187 tctgcagaccttggttacatgttaggagataccaccgagcactgcagtacgtacaaaggt 246 |||||||||||||||||||| |||||||||||||| |||||||||||||| || |||||| Sbjct: 727 tctgcagaccttggttacattttaggagataccactgagcactgcagtacatataaaggt 786 Query: 247 ctaagatatcgagctgctattatcttcattcttggattctggatgttggacctggcaaac 306 ||||| |||||| |||||||| ||| ||||||| |||||||||||||| || |||||| Sbjct: 787 tcaagatttcgagcagctattattttcgttcttgggttctggatgttggatctcgcaaac 846 Query: 307 aatacagtgcaaggacctgcccgtgcccttctagccgatctttcaggtcctgatcaatgt 366 |||||||| ||||| ||||| ||||||||| |||| || ||||||||||||||||| ||| Sbjct: 847 aatacagttcaaggtcctgctcgtgcccttttagctgacctttcaggtcctgatcagtgt 906 Query: 367 aattcagcaaatgcgatattctgctcatggatggctgtcggaaatgtacttggtttttca 426 ||||| |||||||| || || ||| ||||||||||||| ||||| || |||||||||||| Sbjct: 907 aattctgcaaatgcaattttttgcacatggatggctgttggaaacgttcttggtttttca 966 Query: 427 gctggtgcgagtgggaattggcacaagtggtttccttttctaatgacaagagcctgctgt 486 ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 967 tctggtgctagtgggaattggcacaagtggtttccttttctaatgacaagagcatgctgt 1026 Query: 487 gaagcttgtggtaacttgaaagcagcttt 515 ||||||||| |||| |||||||| ||||| Sbjct: 1027 gaagcttgtagtaatttgaaagccgcttt 1055
>dbj|AB091673.1| Oryza sativa (japonica cultivar-group) OsSUT4 mRNA for sucrose transporter, complete cds Length = 2158 Score = 517 bits (261), Expect = e-143 Identities = 448/509 (88%), Gaps = 1/509 (0%) Strand = Plus / Plus Query: 8 ctaggaatagacc-tgccatggcgtccttcatttggctttgtgggcctattactggtttt 66 ||||||||||||| ||||||||| || ||||||||||||||||| ||||||||||||||| Sbjct: 307 ctaggaatagaccatgccatggcatcattcatttggctttgtggacctattactggtttt 366 Query: 67 gtcgttcaaccttgtgttggagtctggagcgacaaatgccgctccaagtacgggaggaga 126 || |||||||| |||||||| |||||||| ||||||||||| || ||||| || || || Sbjct: 367 gtggttcaaccatgtgttggtgtctggagtgacaaatgccgttcaaagtatggaagaagg 426 Query: 127 cgacccttcattctcgctggatgcgtgctgatatgtgcagctgtaactttagtcgggttt 186 |||| |||||| | ||||||||| || ||||||| |||||||||||| |||| ||| Sbjct: 427 agaccgttcattttggctggatgcttgatgatatgctttgctgtaactttaatcggattt 486 Query: 187 tctgcagaccttggttacatgttaggagataccaccgagcactgcagtacgtacaaaggt 246 |||||||||||||||||||| |||||||||||||| |||||||||||||| || |||||| Sbjct: 487 tctgcagaccttggttacattttaggagataccactgagcactgcagtacatataaaggt 546 Query: 247 ctaagatatcgagctgctattatcttcattcttggattctggatgttggacctggcaaac 306 ||||| |||||| |||||||| ||| ||||||| |||||||||||||| || |||||| Sbjct: 547 tcaagatttcgagccgctattattttcgttcttgggttctggatgttggatctcgcaaac 606 Query: 307 aatacagtgcaaggacctgcccgtgcccttctagccgatctttcaggtcctgatcaatgt 366 ||||||| ||||| ||||| ||||||||| |||| || ||||||||||||||||| ||| Sbjct: 607 catacagttcaaggtcctgctcgtgcccttttagctgacctttcaggtcctgatcagtgt 666 Query: 367 aattcagcaaatgcgatattctgctcatggatggctgtcggaaatgtacttggtttttca 426 ||||| |||||||| || || ||| ||||||||||||| ||||| || |||||||||||| Sbjct: 667 aattctgcaaatgcaattttttgcacatggatggctgttggaaacgttcttggtttttca 726 Query: 427 gctggtgcgagtgggaattggcacaagtggtttccttttctaatgacaagagcctgctgt 486 ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 727 tctggtgctagtgggaattggcacaagtggtttccttttctaatgacaagagcatgctgt 786 Query: 487 gaagcttgtggtaacttgaaagcagcttt 515 ||||||||| |||| |||||||| ||||| Sbjct: 787 gaagcttgtagtaatttgaaagccgcttt 815
>gb|AY581895.1| Zea mays sucrose transporter 2 (SUT2) mRNA, complete cds Length = 2166 Score = 513 bits (259), Expect = e-142 Identities = 449/511 (87%), Gaps = 1/511 (0%) Strand = Plus / Plus Query: 8 ctaggaatagacc-tgccatggcgtccttcatttggctttgtgggcctattactggtttt 66 ||||||||||||| ||||||||| || || |||||| | ||||||||||| ||||||||| Sbjct: 285 ctaggaatagaccatgccatggcatcatttatttggttgtgtgggcctataactggtttt 344 Query: 67 gtcgttcaaccttgtgttggagtctggagcgacaaatgccgctccaagtacgggaggaga 126 || ||||||||||||||||| || ||||| || || ||||| || ||||| ||||||||| Sbjct: 345 gtggttcaaccttgtgttggtgtttggagtgataagtgccgttcaaagtatgggaggaga 404 Query: 127 cgacccttcattctcgctggatgcgtgctgatatgtgcagctgtaactttagtcgggttt 186 |||| || ||| | ||||||||| | |||||||||| ||||||||| || |||||||| Sbjct: 405 agaccatttattttggctggatgcataatgatatgtgctgctgtaactctaatcgggttt 464 Query: 187 tctgcagaccttggttacatgttaggagataccaccgagcactgcagtacgtacaaaggt 246 ||||||||||| |||||||| ||||| || ||||| ||||||||||| || || |||||| Sbjct: 465 tctgcagacctcggttacatcttaggggacaccactgagcactgcagaacatataaaggt 524 Query: 247 ctaagatatcgagctgctattatcttcattcttggattctggatgttggacctggcaaac 306 ||| | ||||||||||||| | |||||||| ||||||||||||||||||||||||||| Sbjct: 525 tcaaggtttcgagctgctattgttttcattctaggattctggatgttggacctggcaaac 584 Query: 307 aatacagtgcaaggacctgcccgtgcccttctagccgatctttcaggtcctgatcaatgt 366 |||||||||||||| ||||| ||||| |||||||| |||||||||||||||||||| || Sbjct: 585 aatacagtgcaaggtcctgcgcgtgctcttctagctgatctttcaggtcctgatcagtgc 644 Query: 367 aattcagcaaatgcgatattctgctcatggatggctgtcggaaatgtacttggtttttca 426 ||||| |||||||| ||||||||||||||||||||||| || ||| | |||||||||||| Sbjct: 645 aattctgcaaatgcaatattctgctcatggatggctgttgggaatattcttggtttttca 704 Query: 427 gctggtgcgagtgggaattggcacaagtggtttccttttctaatgacaagagcctgctgt 486 ||||| ||||||||| | ||||||||||||||||| ||||||| ||||||||| |||||| Sbjct: 705 gctggagcgagtggggaatggcacaagtggtttccatttctaacgacaagagcatgctgt 764 Query: 487 gaagcttgtggtaacttgaaagcagctttct 517 |||||||| ||||| |||||||||||||||| Sbjct: 765 gaagcttgcggtaatttgaaagcagctttct 795
>gb|AY098894.1| Citrus sinensis sucrose transporter 2 mRNA, complete cds Length = 2386 Score = 155 bits (78), Expect = 2e-34 Identities = 156/182 (85%) Strand = Plus / Plus Query: 283 ttctggatgttggacctggcaaacaatacagtgcaaggacctgcccgtgcccttctagcc 342 |||||| || |||| || ||||||||||||||||||||||| || ||||||||| | || Sbjct: 766 ttctggttgctggatcttgcaaacaatacagtgcaaggaccagctcgtgcccttttggct 825 Query: 343 gatctttcaggtcctgatcaatgtaattcagcaaatgcgatattctgctcatggatggct 402 ||||| ||||||||||||||| | |||||||||||||| ||| ||||||||||||||||| Sbjct: 826 gatctatcaggtcctgatcaacggaattcagcaaatgctatactctgctcatggatggct 885 Query: 403 gtcggaaatgtacttggtttttcagctggtgcgagtgggaattggcacaagtggtttcct 462 || ||||| | || || ||||| |||||||| ||||| | |||||||| ||||||||| Sbjct: 886 gttggaaacatcctagggttttctgctggtgctagtggaagttggcacagatggtttcct 945 Query: 463 tt 464 || Sbjct: 946 tt 947 Score = 71.9 bits (36), Expect = 2e-09 Identities = 159/200 (79%) Strand = Plus / Plus Query: 34 ttcatttggctttgtgggcctattactggttttgtcgttcaaccttgtgttggagtctgg 93 ||||||||||| ||||| |||||||| || |||| ||||||||||||||||| ||||| Sbjct: 517 ttcatttggctctgtggccctattacaggccttgtggttcaaccttgtgttggtatctgg 576 Query: 94 agcgacaaatgccgctccaagtacgggaggagacgacccttcattctcgctggatgcgtg 153 || || |||||| || |||||||| || ||||| || || ||||| || ||||| || Sbjct: 577 agtgataaatgcacatcaaagtacggaagaagacggccatttattcttgcaggatgtctg 636 Query: 154 ctgatatgtgcagctgtaactttagtcgggttttctgcagaccttggttacatgttagga 213 |||| | || ||||| | | ||||||||||||||||| ||||||| || ||||| Sbjct: 637 atgatttctgttgctgtgataattatcgggttttctgcagacattggttatatattaggc 696 Query: 214 gataccaccgagcactgcag 233 ||||| | ||||||||||| Sbjct: 697 gatacgaaggagcactgcag 716
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 119 bits (60), Expect = 9e-24 Identities = 93/104 (89%) Strand = Plus / Plus Query: 351 aggtcctgatcaatgtaattcagcaaatgcgatattctgctcatggatggctgtcggaaa 410 |||||||||||| |||||||| |||||||| || || ||| ||||||||||||| ||||| Sbjct: 35569145 aggtcctgatcagtgtaattctgcaaatgcaattttttgcacatggatggctgttggaaa 35569204 Query: 411 tgtacttggtttttcagctggtgcgagtgggaattggcacaagt 454 || |||||||||||| ||||||| ||||||||||||||||||| Sbjct: 35569205 cgttcttggtttttcatctggtgctagtgggaattggcacaagt 35569248 Score = 97.6 bits (49), Expect = 3e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 169 gtaactttagtcgggttttctgcagaccttggttacatgttaggagataccaccgagcac 228 ||||||||| |||| ||||||||||||||||||||||| |||||||||||||| |||||| Sbjct: 35568652 gtaactttaatcggattttctgcagaccttggttacattttaggagataccactgagcac 35568711 Query: 229 tgcag 233 ||||| Sbjct: 35568712 tgcag 35568716 Score = 93.7 bits (47), Expect = 5e-16 Identities = 59/63 (93%) Strand = Plus / Plus Query: 453 gtggtttccttttctaatgacaagagcctgctgtgaagcttgtggtaacttgaaagcagc 512 ||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||| || Sbjct: 35569738 gtggtttccttttctaatgacaagagcatgctgtgaagcttgtagtaatttgaaagccgc 35569797 Query: 513 ttt 515 ||| Sbjct: 35569798 ttt 35569800 Score = 83.8 bits (42), Expect = 5e-13 Identities = 58/62 (93%), Gaps = 1/62 (1%) Strand = Plus / Plus Query: 8 ctaggaatagacc-tgccatggcgtccttcatttggctttgtgggcctattactggtttt 66 ||||||||||||| ||||||||| || ||||||||||||||||| ||||||||||||||| Sbjct: 35568306 ctaggaatagaccatgccatggcatcattcatttggctttgtggacctattactggtttt 35568365 Query: 67 gt 68 || Sbjct: 35568366 gt 35568367 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 231 cagtacgtacaaaggtctaagatatcgagctgctattatcttcattcttggattctggat 290 |||||| || |||||| ||||| |||||| |||||||| ||| ||||||| |||||||| Sbjct: 35568799 cagtacatataaaggttcaagatttcgagcagctattattttcgttcttgggttctggat 35568858 Query: 291 gttggacctggcaaacaatacagtgcaag 319 |||||| || |||||||||||||| |||| Sbjct: 35568859 gttggatctcgcaaacaatacagttcaag 35568887 Score = 63.9 bits (32), Expect = 5e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 70 gttcaaccttgtgttggagtctggagcgacaaatgccgctccaagtacgggaggagacga 129 |||||||| |||||||| |||||||| ||||||||||| || ||||| || || || || Sbjct: 35568475 gttcaaccatgtgttggtgtctggagtgacaaatgccgttcaaagtatggaagaaggaga 35568534 Query: 130 cccttcattctcgctggatgcgtgctgatatg 161 || |||||| | ||||||||| || ||||||| Sbjct: 35568535 ccgttcattttggctggatgcttgatgatatg 35568566
>dbj|AP004776.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0452F04 Length = 171421 Score = 119 bits (60), Expect = 9e-24 Identities = 93/104 (89%) Strand = Plus / Plus Query: 351 aggtcctgatcaatgtaattcagcaaatgcgatattctgctcatggatggctgtcggaaa 410 |||||||||||| |||||||| |||||||| || || ||| ||||||||||||| ||||| Sbjct: 85537 aggtcctgatcagtgtaattctgcaaatgcaattttttgcacatggatggctgttggaaa 85596 Query: 411 tgtacttggtttttcagctggtgcgagtgggaattggcacaagt 454 || |||||||||||| ||||||| ||||||||||||||||||| Sbjct: 85597 cgttcttggtttttcatctggtgctagtgggaattggcacaagt 85640 Score = 97.6 bits (49), Expect = 3e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 169 gtaactttagtcgggttttctgcagaccttggttacatgttaggagataccaccgagcac 228 ||||||||| |||| ||||||||||||||||||||||| |||||||||||||| |||||| Sbjct: 85044 gtaactttaatcggattttctgcagaccttggttacattttaggagataccactgagcac 85103 Query: 229 tgcag 233 ||||| Sbjct: 85104 tgcag 85108 Score = 93.7 bits (47), Expect = 5e-16 Identities = 59/63 (93%) Strand = Plus / Plus Query: 453 gtggtttccttttctaatgacaagagcctgctgtgaagcttgtggtaacttgaaagcagc 512 ||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||| || Sbjct: 86130 gtggtttccttttctaatgacaagagcatgctgtgaagcttgtagtaatttgaaagccgc 86189 Query: 513 ttt 515 ||| Sbjct: 86190 ttt 86192 Score = 83.8 bits (42), Expect = 5e-13 Identities = 58/62 (93%), Gaps = 1/62 (1%) Strand = Plus / Plus Query: 8 ctaggaatagacc-tgccatggcgtccttcatttggctttgtgggcctattactggtttt 66 ||||||||||||| ||||||||| || ||||||||||||||||| ||||||||||||||| Sbjct: 84698 ctaggaatagaccatgccatggcatcattcatttggctttgtggacctattactggtttt 84757 Query: 67 gt 68 || Sbjct: 84758 gt 84759 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 231 cagtacgtacaaaggtctaagatatcgagctgctattatcttcattcttggattctggat 290 |||||| || |||||| ||||| |||||| |||||||| ||| ||||||| |||||||| Sbjct: 85191 cagtacatataaaggttcaagatttcgagcagctattattttcgttcttgggttctggat 85250 Query: 291 gttggacctggcaaacaatacagtgcaag 319 |||||| || |||||||||||||| |||| Sbjct: 85251 gttggatctcgcaaacaatacagttcaag 85279 Score = 63.9 bits (32), Expect = 5e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 70 gttcaaccttgtgttggagtctggagcgacaaatgccgctccaagtacgggaggagacga 129 |||||||| |||||||| |||||||| ||||||||||| || ||||| || || || || Sbjct: 84867 gttcaaccatgtgttggtgtctggagtgacaaatgccgttcaaagtatggaagaaggaga 84926 Query: 130 cccttcattctcgctggatgcgtgctgatatg 161 || |||||| | ||||||||| || ||||||| Sbjct: 84927 ccgttcattttggctggatgcttgatgatatg 84958
>gb|AF021809.1|AF021809 Vitis vinifera putative sucrose transporter (VvSUC12) mRNA, complete cds Length = 2130 Score = 117 bits (59), Expect = 4e-23 Identities = 158/191 (82%) Strand = Plus / Plus Query: 277 cttggattctggatgttggacctggcaaacaatacagtgcaaggacctgcccgtgccctt 336 |||||||| |||||| | || || ||||||||||| ||||| || || || ||||| ||| Sbjct: 581 cttggattttggatgctagatcttgcaaacaatacggtgcagggcccagctcgtgctctt 640 Query: 337 ctagccgatctttcaggtcctgatcaatgtaattcagcaaatgcgatattctgctcatgg 396 ||||| ||||| |||||||||||||| | |||||||||||||| || || ||||||||| Sbjct: 641 ctagctgatctatcaggtcctgatcagcgaaattcagcaaatgccatcttttgctcatgg 700 Query: 397 atggctgtcggaaatgtacttggtttttcagctggtgcgagtgggaattggcacaagtgg 456 |||||||| ||||| | || || ||||| |||||||| ||||| | ||||| | ||| Sbjct: 701 atggctgtgggaaacattctaggattttctgctggtgctagtggacactggcatagatgg 760 Query: 457 tttccttttct 467 ||||||||||| Sbjct: 761 tttccttttct 771 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Plus Query: 40 tggctttgtgggcctattactggttttgtcgttcaaccttgtgttgg 86 ||||||||||| |||||||| || |||| ||||| ||||||||||| Sbjct: 344 tggctttgtggccctattacaggccttgtggttcagccttgtgttgg 390 Score = 40.1 bits (20), Expect = 7.0 Identities = 35/40 (87%) Strand = Plus / Plus Query: 181 gggttttctgcagaccttggttacatgttaggagatacca 220 ||||||||||||||| |||| || | ||||||||||||| Sbjct: 485 gggttttctgcagacattggatatttattaggagatacca 524
>gb|DQ138373.1| Manihot esculenta sucrose transporter type 2 (SUT2) mRNA, complete cds Length = 2431 Score = 105 bits (53), Expect = 1e-19 Identities = 170/209 (81%) Strand = Plus / Plus Query: 304 aacaatacagtgcaaggacctgcccgtgcccttctagccgatctttcaggtcctgatcaa 363 |||||||||||||| ||||| || ||||| ||||| || ||| | ||||||||||||||| Sbjct: 794 aacaatacagtgcagggaccagcacgtgctcttctggctgatttatcaggtcctgatcaa 853 Query: 364 tgtaattcagcaaatgcgatattctgctcatggatggctgtcggaaatgtacttggtttt 423 | |||| |||||||| |||| ||||||||||||||||| |||||| | | || ||| Sbjct: 854 cgcaattgtgcaaatgctgtattttgctcatggatggctgttggaaatattttagggttt 913 Query: 424 tcagctggtgcgagtgggaattggcacaagtggtttccttttctaatgacaagagcctgc 483 || || ||||| ||||||| |||| ||| ||||||||||| | |||| ||||| || Sbjct: 914 tctgcaggtgctagtgggagttggaacagatggtttcctttcttgatgagtagagcttgt 973 Query: 484 tgtgaagcttgtggtaacttgaaagcagc 512 |||||||| ||||| || |||||||||| Sbjct: 974 tgtgaagcatgtggaaatctgaaagcagc 1002 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 37 atttggctttgtgggcctattactggttttgtcgttcaaccttgtgttgg 86 |||||||||||||| ||||| || ||| |||| ||||||||||||||||| Sbjct: 527 atttggctttgtggccctataacaggtcttgtggttcaaccttgtgttgg 576 Score = 46.1 bits (23), Expect = 0.11 Identities = 56/67 (83%) Strand = Plus / Plus Query: 179 tcgggttttctgcagaccttggttacatgttaggagataccaccgagcactgcagtacgt 238 |||| |||||||||||| |||| || || ||||| ||||| | |||||||||||||| | Sbjct: 669 tcggattttctgcagacattggatatatattaggggatacaaaggagcactgcagtacat 728 Query: 239 acaaagg 245 |||||| Sbjct: 729 tcaaagg 735
>ref|NM_201675.1| Arabidopsis thaliana SUT2; carbohydrate transporter/ sugar porter AT2G02860 (SUT2) transcript variant AT2G02860.2 mRNA, complete cds Length = 2113 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 290 tgttggacctggcaaacaatacagtgcaaggacctgcccgtgcccttctagccgatcttt 349 ||||||| || |||||||||||||| || |||||||| ||||| |||||||| ||||| | Sbjct: 688 tgttggatctagcaaacaatacagtacagggacctgctcgtgctcttctagctgatctat 747 Query: 350 caggtcctgatca 362 ||||||||||||| Sbjct: 748 caggtcctgatca 760
>ref|NM_126341.2| Arabidopsis thaliana SUT2; carbohydrate transporter/ sucrose:hydrogen symporter/ sugar porter AT2G02860 (SUT2) transcript variant AT2G02860.1 mRNA, complete cds Length = 2138 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 290 tgttggacctggcaaacaatacagtgcaaggacctgcccgtgcccttctagccgatcttt 349 ||||||| || |||||||||||||| || |||||||| ||||| |||||||| ||||| | Sbjct: 713 tgttggatctagcaaacaatacagtacagggacctgctcgtgctcttctagctgatctat 772 Query: 350 caggtcctgatca 362 ||||||||||||| Sbjct: 773 caggtcctgatca 785
>emb|BX821478.1|CNS0A94M Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL44ZD08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2056 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 290 tgttggacctggcaaacaatacagtgcaaggacctgcccgtgcccttctagccgatcttt 349 ||||||| || |||||||||||||| || |||||||| ||||| |||||||| ||||| | Sbjct: 639 tgttggatctagcaaacaatacagtacagggacctgctcgtgctcttctagctgatctat 698 Query: 350 caggtcctgatca 362 ||||||||||||| Sbjct: 699 caggtcctgatca 711
>emb|AJ289165.1|ATH289165 Arabidopsis thaliana mRNA for sucrose transporter (suc3 gene) Length = 1785 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 290 tgttggacctggcaaacaatacagtgcaaggacctgcccgtgcccttctagccgatcttt 349 ||||||| || |||||||||||||| || |||||||| ||||| |||||||| ||||| | Sbjct: 554 tgttggatctagcaaacaatacagtacagggacctgctcgtgctcttctagctgatctat 613 Query: 350 caggtcctgatca 362 ||||||||||||| Sbjct: 614 caggtcctgatca 626
>emb|AJ534442.1|PMA534442 Plantago major macronuclear mRNA for sucrose transporter (suc3 gene) Length = 1800 Score = 77.8 bits (39), Expect = 3e-11 Identities = 162/203 (79%) Strand = Plus / Plus Query: 259 gctgctattatcttcattcttggattctggatgttggacctggcaaacaatacagtgcaa 318 |||||||| ||||||| |||| || |||||| |||||||||||||||| || ||||| Sbjct: 520 gctgctatcgtcttcataattgggttttggatgctggacctggcaaacaacactgtgcag 579 Query: 319 ggacctgcccgtgcccttctagccgatctttcaggtcctgatcaatgtaattcagcaaat 378 || || || || || || || || ||| | ||||| ||||| ||| | ||| |||||||| Sbjct: 580 ggtccagctcgagcactcctggctgatttatcaggccctgagcaaagaaatgcagcaaat 639 Query: 379 gcgatattctgctcatggatggctgtcggaaatgtacttggtttttcagctggtgcgagt 438 || ||||| || || ||||||||||| ||||| | || || |||||| |||| || ||| Sbjct: 640 gctatattttgttcttggatggctgttggaaacattctcggattttcatctggggcaagt 699 Query: 439 gggaattggcacaagtggtttcc 461 || |||||||||| |||||||| Sbjct: 700 ggaaattggcacagatggtttcc 722
>gb|AY946204.1| Eucommia ulmoides sucrose transporter 2 mRNA, complete cds Length = 1963 Score = 67.9 bits (34), Expect = 3e-08 Identities = 127/158 (80%) Strand = Plus / Plus Query: 355 cctgatcaatgtaattcagcaaatgcgatattctgctcatggatggctgtcggaaatgta 414 ||||||||| | |||||||| ||||| | || |||||||||||||||||||| ||| | Sbjct: 628 cctgatcaaagaaattcagctaatgctgttttttgctcatggatggctgtcgggaatatt 687 Query: 415 cttggtttttcagctggtgcgagtgggaattggcacaagtggtttccttttctaatgaca 474 | || ||||| |||||||| ||||| | ||||||| |||||||| || || |||| Sbjct: 688 ttaggattttctgctggtgctagtggacagtggcacagatggtttccattcctgatgagt 747 Query: 475 agagcctgctgtgaagcttgtggtaacttgaaagcagc 512 ||||| || |||||||| ||||| ||| | |||||||| Sbjct: 748 agagcttgttgtgaagcctgtggaaaccttaaagcagc 785 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 40 tggctttgtgggcctattactggttttgtcgttcaaccttgtgttgg 86 ||||||||||| ||||| ||||| |||| ||||||||||||||||| Sbjct: 313 tggctttgtggtcctatcactggccttgtggttcaaccttgtgttgg 359
>dbj|AK100027.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146J01, full insert sequence Length = 2062 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 442 aattggcacaagtggtttccttttctaatgacaagagcctgctgtgaagcttgtg 496 |||||||||||||||||||| || || | |||||||| |||||||||||||||| Sbjct: 876 aattggcacaagtggtttccattccttaaaacaagagcttgctgtgaagcttgtg 930
>dbj|D87819.1| Oryza sativa (japonica cultivar-group) mRNA for sucrose transporter, complete cds Length = 2036 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 442 aattggcacaagtggtttccttttctaatgacaagagcctgctgtgaagcttgtg 496 |||||||||||||||||||| || || | |||||||| |||||||||||||||| Sbjct: 739 aattggcacaagtggtttccattccttaaaacaagagcttgctgtgaagcttgtg 793
>gb|AC139840.1| Solanum demissum chromosome 5 BAC PGEC323D8 genomic sequence, complete sequence Length = 106746 Score = 60.0 bits (30), Expect = 8e-06 Identities = 75/90 (83%) Strand = Plus / Plus Query: 351 aggtcctgatcaatgtaattcagcaaatgcgatattctgctcatggatggctgtcggaaa 410 ||||||||||||| | ||| | |||||||| | |||||||| ||||||||||||||||| Sbjct: 68409 aggtcctgatcaaagaaataccgcaaatgctgtgttctgctcctggatggctgtcggaaa 68468 Query: 411 tgtacttggtttttcagctggtgcgagtgg 440 | ||||| ||||| ||||| || ||||| Sbjct: 68469 cattcttggattttctgctggagccagtgg 68498
>gb|AY830138.1| Ipomoea batatas cultivar Beauregard clone BAC117E14, complete sequence Length = 99025 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 259 gctgctattatcttcattcttggattctggatgttggacctggcaaacaatac 311 ||||||||| | |||||| ||||||||||| ||||||| || ||||||||||| Sbjct: 59161 gctgctattgtgttcattattggattctggctgttggatcttgcaaacaatac 59109 Score = 52.0 bits (26), Expect = 0.002 Identities = 83/102 (81%) Strand = Plus / Minus Query: 350 caggtcctgatcaatgtaattcagcaaatgcgatattctgctcatggatggctgtcggaa 409 |||||||||||||| | ||| | |||||||| | || ||||| ||||||||||| |||| Sbjct: 58889 caggtcctgatcaaagaaatactgcaaatgctgtgttttgctcctggatggctgttggaa 58830 Query: 410 atgtacttggtttttcagctggtgcgagtgggaattggcaca 451 | | || || ||||| ||||| || ||||| |||||||||| Sbjct: 58829 acattctaggattttctgctggagccagtggaaattggcaca 58788
>gb|AY291289.1| Solanum tuberosum sucrose transporter-like protein (SUT2) mRNA, complete cds Length = 1818 Score = 58.0 bits (29), Expect = 3e-05 Identities = 92/113 (81%) Strand = Plus / Plus Query: 349 tcaggtcctgatcaatgtaattcagcaaatgcgatattctgctcatggatggctgtcgga 408 ||||||||||||||| | ||| | |||||||| | |||||||| ||||||||||| ||| Sbjct: 625 tcaggtcctgatcaaagaaataccgcaaatgctgtgttctgctcctggatggctgttgga 684 Query: 409 aatgtacttggtttttcagctggtgcgagtgggaattggcacaagtggtttcc 461 || | ||||| ||||| ||||| || ||||| |||||||| |||||||| Sbjct: 685 aacattcttggattttctgctggagccagtggaggttggcacagatggtttcc 737
>gb|AF166498.1|AF166498 Lycopersicon esculentum sucrose transporter-like protein (SUT2) mRNA, complete cds Length = 2137 Score = 58.0 bits (29), Expect = 3e-05 Identities = 92/113 (81%) Strand = Plus / Plus Query: 349 tcaggtcctgatcaatgtaattcagcaaatgcgatattctgctcatggatggctgtcgga 408 ||||||||||||||| | ||| | |||||||| | |||||||| ||||||||||| ||| Sbjct: 720 tcaggtcctgatcaaagaaataccgcaaatgctgtgttctgctcctggatggctgttgga 779 Query: 409 aatgtacttggtttttcagctggtgcgagtgggaattggcacaagtggtttcc 461 || | ||||| ||||| ||||| || ||||| |||||||| |||||||| Sbjct: 780 aacattcttggattttctgctggagccagtggaggttggcacagatggtttcc 832
>emb|BX819660.1|CNS0A9DP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS12ZH08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1345 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 319 ggacctgcccgtgcccttctagccgatctttcaggtcctgatca 362 |||||||| ||||| |||||||| ||||| |||||||||||||| Sbjct: 4 ggacctgctcgtgctcttctagctgatctatcaggtcctgatca 47
>gb|AC135288.1| Solanum demissum chromosome 5 BAC PGEC219 genomic sequence, complete sequence Length = 124895 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Minus Query: 351 aggtcctgatcaatgtaattcagcaaatgcgatattctgctcatggatggctgtcggaaa 410 ||||||||||||| | ||| | |||||||| | |||||||| ||||||||||| ||||| Sbjct: 111716 aggtcctgatcaaagaaataccgcaaatgctgtgttctgctcctggatggctgttggaaa 111657 Query: 411 tgtacttggtttttcagctggtgcgagtgg 440 | ||||| ||||| ||||| || ||||| Sbjct: 111656 cattcttggattttctgctggagccagtgg 111627
>gb|AC142505.1| Solanum demissum chromosome 5 BAC PGEC287I17 genomic sequence, complete sequence Length = 78626 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Plus Query: 351 aggtcctgatcaatgtaattcagcaaatgcgatattctgctcatggatggctgtcggaaa 410 ||||||||||||| | ||| | |||||||| | |||||||| ||||||||||| ||||| Sbjct: 42021 aggtcctgatcaaagaaataccgcaaatgctgtgttctgctcctggatggctgttggaaa 42080 Query: 411 tgtacttggtttttcagctggtgcgagtgg 440 | ||||| ||||| ||||| || ||||| Sbjct: 42081 cattcttggattttctgctggagccagtgg 42110
>gb|AC079256.5| Homo sapiens BAC clone RP11-325I24 from 2, complete sequence Length = 156069 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 280 ggattctggatgttggacctggcaaa 305 ||||||||||| |||||||||||||| Sbjct: 64220 ggattctggatattggacctggcaaa 64195
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 472 acaagagcctgctgtgaagcttgtg 496 |||||||| |||||||||||||||| Sbjct: 3781392 acaagagcttgctgtgaagcttgtg 3781368
>gb|AC006378.2| Homo sapiens BAC clone RP11-455I9 from 7, complete sequence Length = 102598 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 358 gatcaatgtaattcagcaaat 378 ||||||||||||||||||||| Sbjct: 88314 gatcaatgtaattcagcaaat 88294
>gb|AC144491.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNAa0091P11, complete sequence Length = 132151 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 472 acaagagcctgctgtgaagcttgtg 496 |||||||| |||||||||||||||| Sbjct: 60016 acaagagcttgctgtgaagcttgtg 59992
>gb|AF280050.1| Oryza sativa (indica cultivar-group) sucrose transporter (SUT1) gene, complete cds Length = 7717 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 472 acaagagcctgctgtgaagcttgtg 496 |||||||| |||||||||||||||| Sbjct: 5693 acaagagcttgctgtgaagcttgtg 5717
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 472 acaagagcctgctgtgaagcttgtg 496 |||||||| |||||||||||||||| Sbjct: 3781503 acaagagcttgctgtgaagcttgtg 3781479
>emb|AL954637.6| Zebrafish DNA sequence from clone DKEY-149G8 in linkage group 6, complete sequence Length = 161867 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 413 tacttggtttttcagctggtg 433 ||||||||||||||||||||| Sbjct: 68591 tacttggtttttcagctggtg 68571
>gb|AC147324.3| Pan troglodytes BAC clone RP43-41B9 from chromosome 7, complete sequence Length = 163009 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 358 gatcaatgtaattcagcaaat 378 ||||||||||||||||||||| Sbjct: 78200 gatcaatgtaattcagcaaat 78180
>dbj|AB071809.1| Oryza sativa (japonica cultivar-group) OsSUT3 mRNA for sucrose transporter, complete cds Length = 1713 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 445 tggcacaagtggtttccttttctaatgac 473 ||||||||||||||||| ||||| ||||| Sbjct: 682 tggcacaagtggtttccctttctcatgac 710
>gb|AY780256.1| Saccharum hybrid cultivar sucrose transporter (SUT1) mRNA, complete cds Length = 1554 Score = 40.1 bits (20), Expect = 7.0 Identities = 44/52 (84%) Strand = Plus / Plus Query: 445 tggcacaagtggtttccttttctaatgacaagagcctgctgtgaagcttgtg 496 ||||||||||||||||| || || | |||| |||||||||||||| |||| Sbjct: 619 tggcacaagtggtttcccttcctcaaaacaaatgcctgctgtgaagcctgtg 670
>emb|AJ566416.1|TCA566416 Theobroma cacao microsatellite, clone mTcCIR68 Length = 595 Score = 40.1 bits (20), Expect = 7.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 70 gttcaaccttgtgttggagtctggagcgacaaatgc 105 |||||||||||||||||| | ||||| || |||||| Sbjct: 347 gttcaaccttgtgttggaatttggagtgataaatgc 312
>gb|AC119851.9| Mus musculus chromosome 7, clone RP23-106N20, complete sequence Length = 226307 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 gttggacctggcaaacaata 310 |||||||||||||||||||| Sbjct: 128193 gttggacctggcaaacaata 128174
>emb|AL590113.8| Human DNA sequence from clone RP11-234D19 on chromosome 1 Contains a novel gene (gm117), the BCL10 gene for B-cell CLL/lymphoma 10 and the 5' end of a novel gene, complete sequence Length = 97789 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 gattctggatgttggacctg 300 |||||||||||||||||||| Sbjct: 21958 gattctggatgttggacctg 21977
>emb|AL356100.8| Human DNA sequence from clone RP11-359H22 on chromosome 10 Contains part of a novel gene (KIAA0534), complete sequence Length = 190361 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 282 attctggatgttggacctggcaaa 305 ||||||||||| |||||||||||| Sbjct: 61630 attctggatgtaggacctggcaaa 61653
>emb|AL049823.14|HSJ813O16 Human DNA sequence from clone RP4-813O16 on chromosome 6q23.2-24.3 Contains STSs and GSSs, complete sequence Length = 155609 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 gtcctgatcaatgtaattca 372 |||||||||||||||||||| Sbjct: 4728 gtcctgatcaatgtaattca 4709
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 345 tctttcaggtcctgatcaatgtaa 368 |||||||| ||||||||||||||| Sbjct: 6066511 tctttcagttcctgatcaatgtaa 6066534
>gb|AF191024.1|AF191024 Asarina barclaiana sucrose transporter 1 (SUT1) mRNA, complete cds Length = 1764 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 ttcatttggctttgtgggcc 53 |||||||||||||||||||| Sbjct: 226 ttcatttggctttgtgggcc 245
>gb|AC112227.4| Homo sapiens BAC clone RP13-552G12 from 4, complete sequence Length = 151609 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 282 attctggatgttggacctggcaaa 305 ||||||||||||||| |||||||| Sbjct: 120679 attctggatgttggatctggcaaa 120656
>gb|AC149148.3| Xenopus tropicalis clone ISB-165E2, complete sequence Length = 96596 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 aatacagtgcaaggacctgc 326 |||||||||||||||||||| Sbjct: 57711 aatacagtgcaaggacctgc 57730
>gb|AY106212.1| Zea mays PCO103031 mRNA sequence Length = 2088 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 aattggcacaagtggtttcc 461 |||||||||||||||||||| Sbjct: 820 aattggcacaagtggtttcc 839 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,036,399 Number of Sequences: 3902068 Number of extensions: 4036399 Number of successful extensions: 69470 Number of sequences better than 10.0: 44 Number of HSP's better than 10.0 without gapping: 43 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 69324 Number of HSP's gapped (non-prelim): 142 length of query: 517 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 494 effective length of database: 17,143,297,704 effective search space: 8468789065776 effective search space used: 8468789065776 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
