ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd19o15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_481635.1| Oryza sativa (japonica cultivar-group), mRNA 82 2e-12
2dbj|AK073839.1| Oryza sativa (japonica cultivar-group) cDNA clon... 82 2e-12
3gb|AC161456.3| Mus musculus BAC clone RP23-190H11 from chromosom... 46 0.12
4gb|AC121990.3| Mus musculus BAC clone RP24-298L8 from chromosome... 46 0.12
5ref|XM_510830.1| PREDICTED: Pan troglodytes similar to DNA repai... 44 0.46
6ref|NM_005236.1| Homo sapiens excision repair cross-complementin... 44 0.46
7gb|BC036408.1| Homo sapiens cDNA clone IMAGE:5266573 44 0.46
8gb|AF491814.1| Homo sapiens excision repair cross-complementing ... 44 0.46
9gb|L76568.1|HUMERCC4G Homo sapiens excision and cross link repai... 44 0.46
10gb|L77890.1|HUMERCC4C1 Homo sapiens excision repair protein ERCC... 44 0.46
11emb|CR388760.1| Gallus gallus finished cDNA, clone ChEST879i7 44 0.46
12dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.46
13gb|AC009173.9| Homo sapiens chromosome 16 clone RP11-99H5, compl... 44 0.46
14gb|AC010401.7| Homo sapiens chromosome 16 clone CTD-2135D7, comp... 44 0.46
15dbj|AP004759.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.46
16dbj|AP003884.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.46
17gb|U64315.1|HSU64315 Human DNA repair endonuclease subunit (XPF)... 44 0.46
18emb|AL627425.15| Mouse DNA sequence from clone RP23-283L16 on ch... 44 0.46
19gb|AC163623.5| Mus musculus BAC clone RP23-123D6 from chromosome... 42 1.8
20gb|AC142268.4| Mus musculus BAC clone RP24-156E13 from chromosom... 42 1.8
21gb|AC122491.3| Mus musculus BAC clone RP24-390D3 from chromosome... 42 1.8
22gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.8
23gb|AC073556.11| Oryza sativa chromosome 3 BAC OSJNBa0091P11 geno... 42 1.8
24dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
25dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
26dbj|AP002817.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
27dbj|AP001366.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
28dbj|AK107189.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.8
29dbj|AK102361.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.8
30gb|U56965.1| Caenorhabditis elegans cosmid C15H9, complete sequence 42 1.8
31dbj|AK062597.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.8
32gb|AY108450.1| Zea mays PCO107841 mRNA sequence 42 1.8
33gb|AC104896.13| Mus musculus chromosome 1, clone RP23-299F18, co... 42 1.8
34gb|AC165972.4| Mus musculus BAC clone RP23-87D12 from chromosome... 40 7.2
35gb|AC141887.5| Mus musculus BAC clone RP23-478L20 from chromosom... 40 7.2
36gb|AC110512.13| Mus musculus chromosome 15, clone RP24-134E9, co... 40 7.2
37ref|XM_470007.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.2
38ref|XM_473281.1| Oryza sativa (japonica cultivar-group), predic... 40 7.2
39gb|BT016837.1| Zea mays clone Contig670 mRNA sequence 40 7.2
40gb|AC139233.10| Mus musculus chromosome 19, clone RP23-265E24, c... 40 7.2
41gb|AC159092.11| Mus musculus chromosome 1, clone RP23-103C13, co... 40 7.2
42gb|AY910750.1| Gallus gallus glycerophosphodiester phosphodieste... 40 7.2
43gb|AC127171.54| Mus musculus strain C57BL/6J clone rp23-202i7 ma... 40 7.2
44gb|AC117790.23| Mus musculus chromosome 19, clone RP24-548O2, co... 40 7.2
45gb|AC150551.1| Drosophila melanogaster clone BACR16A12, complete... 40 7.2
46gb|BC014908.1| Homo sapiens stem-loop (histone) binding protein,... 40 7.2
47gb|BC015703.1| Homo sapiens stem-loop (histone) binding protein,... 40 7.2
48gb|AC165278.4| Mus musculus chromosome 15, clone RP23-250O18, co... 40 7.2
49gb|AC114986.13| Mus musculus chromosome 1, clone RP23-242G7, com... 40 7.2
50gb|AC164600.5| Mus musculus chromosome 1, clone RP23-366M5, comp... 40 7.2
51gb|AC132106.4| Mus musculus BAC clone RP24-240D2 from chromosome... 40 7.2
52gb|AC135563.5| Oryza sativa chromosome 3 BAC OSJNBb0015I02 genom... 40 7.2
53gb|BC064719.1| Xenopus tropicalis cDNA clone IMAGE:5383988, cont... 40 7.2
54gb|AC113107.15| Mus musculus chromosome 10, clone RP23-325G13, c... 40 7.2
55gb|AC096226.12| Rattus norvegicus 18 BAC CH230-26M18 (Children's... 40 7.2
56gb|AC122232.3| Mus musculus BAC clone RP23-136G1 from chromosome... 40 7.2
57gb|AC113554.9| Homo sapiens chromosome 17, clone CTD-2501B8, com... 40 7.2
58gb|AC116998.3| Mus musculus BAC clone RP23-16F6 from 18, complet... 40 7.2
59emb|CR652300.2|CNS0F2AA Tetraodon nigroviridis full-length cDNA 40 7.2
60gb|AC183502.5| Medicago truncatula clone mth2-75g17, complete se... 40 7.2
61gb|AC146702.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 7.2
62gb|AC140549.12| Medicago truncatula clone mth2-28o14, complete s... 40 7.2
63ref|NM_006527.2| Homo sapiens stem-loop (histone) binding protei... 40 7.2
64emb|AL590128.11| Human DNA sequence from clone RP11-312B8 on chr... 40 7.2
65gb|AC091158.11| Mus musculus Strain C57BL6/J chromosome 6 BAC, R... 40 7.2
66gb|AC160391.2| Mus musculus BAC clone RP24-235G7 from chromosome... 40 7.2
67emb|AL662984.3|OSJN00183 Oryza sativa genomic DNA, chromosome 4,... 40 7.2
68gb|AC010666.4| Drosophila melanogaster 3L BAC RP98-22O21 (Roswel... 40 7.2
69gb|AC123568.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 7.2
70gb|AY113407.1| Drosophila melanogaster RE13370 full insert cDNA 40 7.2
71ref|NM_141151.2| Drosophila melanogaster CG11370-RA (CG11370), mRNA 40 7.2
72ref|NM_134680.1| Drosophila melanogaster BBS2 CG13691-RA (BBS2),... 40 7.2
73gb|AC115482.2| Drosophila melanogaster, chromosome 2L, region 21... 40 7.2
74gb|AC009247.13|AC009247 Homo sapiens 3q27 BAC RP11-410F19 (Rosw... 40 7.2
75gb|AC175205.2| Sporobolomyces roseus clone JGIBAIF-5L1, complete... 40 7.2
76dbj|AK165091.1| Mus musculus 2 days pregnant adult female ovary ... 40 7.2
77emb|CR523530.1| Gallus gallus finished cDNA, clone ChEST526i4 40 7.2
78gb|DP000003.1| Atelerix albiventris target 1 genomic scaffold 40 7.2
79dbj|AK170125.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 7.2
80gb|AC152401.6| Mus musculus chromosome 3, clone RP23-287A2, comp... 40 7.2
81dbj|AB169818.1| Macaca fascicularis brain cDNA, clone: QflA-1052... 40 7.2
82dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
83dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
84gb|AC079818.56| Mus musculus strain C57BL/6J chromosome 10 clone... 40 7.2
85gb|AC139844.11| Mus musculus chromosome 15, clone RP23-342B21, c... 40 7.2
86gb|AC153942.8| Mus musculus 10 BAC RP24-174M19 (Roswell Park Can... 40 7.2
87gb|AC156831.2| Mus musculus BAC clone RP24-276N6 from chromosome... 40 7.2
88gb|AC104429.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.2
89gb|AC108670.10| Homo sapiens 3 BAC RP11-218A22 (Roswell Park Can... 40 7.2
90dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
91dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
92gb|AC150625.3| Atelerix albiventris clone LB4-57B20, complete se... 40 7.2
93ref|XM_318413.2| Anopheles gambiae str. PEST ENSANGP00000015957 ... 40 7.2
94dbj|AK107678.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.2
95dbj|AK102285.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.2
96dbj|AK100921.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.2
97dbj|AK070370.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.2
98gb|AC121887.4| Mus musculus BAC clone RP24-142B15 from 5, comple... 40 7.2
99gb|AY107128.1| Zea mays PCO069400 mRNA sequence 40 7.2
100gb|AE003598.2| Drosophila melanogaster chromosome 3L, section 79... 40 7.2
101gb|AE003589.4| Drosophila melanogaster chromosome 2L, section 2 ... 40 7.2
102dbj|AB073081.2| Zea mays mRNA for uncleaved legumin-1, complete cds 40 7.2
103gb|AC005762.1|AC005762 Drosophila melanogaster DNA sequence (P1s... 40 7.2
104emb|AL844840.8| Mouse DNA sequence from clone RP23-337P9 on chro... 40 7.2
105ref|NM_001037271.1| Gallus gallus glycerophosphodiester phosphod... 40 7.2
106gb|AC157825.3| Mus musculus BAC clone RP23-230M23 from chromosom... 40 7.2
107gb|AC161039.6| Mus musculus chromosome 18, clone RP24-327J14, co... 40 7.2
108gb|AC132111.4| Mus musculus BAC clone RP24-200H19 from 14, compl... 40 7.2
109gb|AC170878.4| Mus musculus BAC clone RP24-226F17 from chromosom... 40 7.2
110gb|AC125134.3| Mus musculus BAC clone RP24-316C22 from 1, comple... 40 7.2
111emb|CT010565.14| Mouse DNA sequence from clone RP23-263E11 on ch... 40 7.2
112gb|U75679.1|U75679 Human histone stem-loop binding protein (SLBP... 40 7.2
113gb|AC148020.3| Mus musculus BAC clone RP23-6A22 from 18, complet... 40 7.2
114gb|AC122183.4| Mus musculus BAC clone RP23-14P23 from 3, complet... 40 7.2
115gb|AC140409.3| Mus musculus BAC clone RP23-138K22 from 9, comple... 40 7.2
116gb|AC118547.41| Mus musculus strain C57BL/6J clone rp23-3g4 map ... 40 7.2
117gb|AC138622.4| Mus musculus BAC clone RP23-100J15 from chromosom... 40 7.2
118gb|AC164565.1| Mus musculus BAC clone RP23-99O13 from chromosome... 40 7.2
119dbj|AB007501.1| Oryza sativa (japonica cultivar-group) mRNA for ... 40 7.2 
>ref|XM_481635.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2371

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 160/199 (80%), Gaps = 3/199 (1%)
 Strand = Plus / Plus

                                                                       
Query: 26  ggcggtccgtgctgctcctcctcctcctgatccccacggcgctctccctgctactgctct 85
           |||||||||||||||| |||||||||     || ||||| |||||| | |||  ||||||
Sbjct: 73  ggcggtccgtgctgctgctcctcctcgc---cctcacggtgctctcgccgctcgtgctct 129

                                                                       
Query: 86  acgagcgccgcctcgccgtcgcgcttaaccccatccagaggaaggatttgccggccggga 145
           ||  |||||| ||| | |  ||||| ||||||| |||||||| ||||||||| | ||  |
Sbjct: 130 acacgcgccgtctctcggcggcgctgaaccccaaccagaggagggatttgcctggcgaaa 189

                                                                       
Query: 146 ttgcgagtcagggccgtagcgtcgaggatagcaagctaactgcgtttcctctggaaactg 205
           | | || |||||||||| | ||  ||| ||||||||||| |||  |||||||||||||||
Sbjct: 190 tcgtgaatcagggccgtggtgttaaggctagcaagctaaatgcacttcctctggaaactg 249

                              
Query: 206 tgagttctttgaaggaacc 224
           || |||||||||| |||||
Sbjct: 250 tgggttctttgaaagaacc 268
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>dbj|AK073839.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070B13, full
           insert sequence
          Length = 2371

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 160/199 (80%), Gaps = 3/199 (1%)
 Strand = Plus / Plus

                                                                       
Query: 26  ggcggtccgtgctgctcctcctcctcctgatccccacggcgctctccctgctactgctct 85
           |||||||||||||||| |||||||||     || ||||| |||||| | |||  ||||||
Sbjct: 73  ggcggtccgtgctgctgctcctcctcgc---cctcacggtgctctcgccgctcgtgctct 129

                                                                       
Query: 86  acgagcgccgcctcgccgtcgcgcttaaccccatccagaggaaggatttgccggccggga 145
           ||  |||||| ||| | |  ||||| ||||||| |||||||| ||||||||| | ||  |
Sbjct: 130 acacgcgccgtctctcggcggcgctgaaccccaaccagaggagggatttgcctggcgaaa 189

                                                                       
Query: 146 ttgcgagtcagggccgtagcgtcgaggatagcaagctaactgcgtttcctctggaaactg 205
           | | || |||||||||| | ||  ||| ||||||||||| |||  |||||||||||||||
Sbjct: 190 tcgtgaatcagggccgtggtgttaaggctagcaagctaaatgcacttcctctggaaactg 249

                              
Query: 206 tgagttctttgaaggaacc 224
           || |||||||||| |||||
Sbjct: 250 tgggttctttgaaagaacc 268
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>gb|AC161456.3| Mus musculus BAC clone RP23-190H11 from chromosome 6, complete sequence
          Length = 208350

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 35     tgctgctcctcctcctcctgatcccca 61
              ||||||||||||||||| |||||||||
Sbjct: 163514 tgctgctcctcctcctcttgatcccca 163488
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>gb|AC121990.3| Mus musculus BAC clone RP24-298L8 from chromosome 6, complete sequence
          Length = 173629

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 35     tgctgctcctcctcctcctgatcccca 61
              ||||||||||||||||| |||||||||
Sbjct: 142547 tgctgctcctcctcctcttgatcccca 142573
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>ref|XM_510830.1| PREDICTED: Pan troglodytes similar to DNA repair endonuclease XPF
           (DNA excision repair protein ERCC-4) (DNA-repair protein
           complementing XP-F cell) (Xeroderma pigmentosum group F
           complementing protein) (LOC453934), mRNA
          Length = 1253

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 506 gaaagaaccctcaaaaagaaaa 527
           ||||||||||||||||||||||
Sbjct: 861 gaaagaaccctcaaaaagaaaa 882
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>ref|NM_005236.1| Homo sapiens excision repair cross-complementing rodent repair
            deficiency, complementation group 4 (ERCC4), mRNA
          Length = 2751

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 506  gaaagaaccctcaaaaagaaaa 527
            ||||||||||||||||||||||
Sbjct: 1444 gaaagaaccctcaaaaagaaaa 1465
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>gb|BC036408.1| Homo sapiens cDNA clone IMAGE:5266573
          Length = 4956

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 506 gaaagaaccctcaaaaagaaaa 527
           ||||||||||||||||||||||
Sbjct: 245 gaaagaaccctcaaaaagaaaa 224
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>gb|AF491814.1| Homo sapiens excision repair cross-complementing rodent repair
             deficiency, complementation group 4 (ERCC4) gene, complete
             cds
          Length = 29755

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 506   gaaagaaccctcaaaaagaaaa 527
             ||||||||||||||||||||||
Sbjct: 16284 gaaagaaccctcaaaaagaaaa 16305
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>gb|L76568.1|HUMERCC4G Homo sapiens excision and cross link repair protein (ERCC4) gene,
             complete genomic sequence
          Length = 35641

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 506   gaaagaaccctcaaaaagaaaa 527
             ||||||||||||||||||||||
Sbjct: 17303 gaaagaaccctcaaaaagaaaa 17324
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>gb|L77890.1|HUMERCC4C1 Homo sapiens excision repair protein ERCC4 mRNA, complete cds, clone
            cer4-40
          Length = 3857

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 506  gaaagaaccctcaaaaagaaaa 527
            ||||||||||||||||||||||
Sbjct: 1456 gaaagaaccctcaaaaagaaaa 1477
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>emb|CR388760.1| Gallus gallus finished cDNA, clone ChEST879i7
          Length = 677

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 35  tgctgctcctcctcctcctgatcccc 60
           |||||||||||||||||||| |||||
Sbjct: 178 tgctgctcctcctcctcctggtcccc 203
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 26       ggcggtccgtgctgctcctcctcctc 51
                |||||||||||||||| |||||||||
Sbjct: 14390755 ggcggtccgtgctgctgctcctcctc 14390780
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>gb|AC009173.9| Homo sapiens chromosome 16 clone RP11-99H5, complete sequence
          Length = 149842

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 506    gaaagaaccctcaaaaagaaaa 527
              ||||||||||||||||||||||
Sbjct: 103425 gaaagaaccctcaaaaagaaaa 103446
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>gb|AC010401.7| Homo sapiens chromosome 16 clone CTD-2135D7, complete sequence
          Length = 119154

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 506    gaaagaaccctcaaaaagaaaa 527
              ||||||||||||||||||||||
Sbjct: 100156 gaaagaaccctcaaaaagaaaa 100135
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>dbj|AP004759.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0670E08
          Length = 133106

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 26    ggcggtccgtgctgctcctcctcctc 51
             |||||||||||||||| |||||||||
Sbjct: 35038 ggcggtccgtgctgctgctcctcctc 35063
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>dbj|AP003884.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1136_A10
          Length = 101249

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 26    ggcggtccgtgctgctcctcctcctc 51
             |||||||||||||||| |||||||||
Sbjct: 93835 ggcggtccgtgctgctgctcctcctc 93860
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>gb|U64315.1|HSU64315 Human DNA repair endonuclease subunit (XPF) mRNA, complete cds
          Length = 2881

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 506  gaaagaaccctcaaaaagaaaa 527
            ||||||||||||||||||||||
Sbjct: 1426 gaaagaaccctcaaaaagaaaa 1447
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>emb|AL627425.15| Mouse DNA sequence from clone RP23-283L16 on chromosome 4, complete
             sequence
          Length = 226967

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 35    tgctgctcctcctcctcctgat 56
             ||||||||||||||||||||||
Sbjct: 46496 tgctgctcctcctcctcctgat 46475
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>gb|AC163623.5| Mus musculus BAC clone RP23-123D6 from chromosome 9, complete sequence
          Length = 193784

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 33    cgtgctgctcctcctcctcct 53
             |||||||||||||||||||||
Sbjct: 88173 cgtgctgctcctcctcctcct 88153
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>gb|AC142268.4| Mus musculus BAC clone RP24-156E13 from chromosome 8, complete sequence
          Length = 145999

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 204   tgtgagttctttgaaggaacc 224
             |||||||||||||||||||||
Sbjct: 70805 tgtgagttctttgaaggaacc 70785
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>gb|AC122491.3| Mus musculus BAC clone RP24-390D3 from chromosome 3, complete sequence
          Length = 175092

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 511   aaccctcaaaaagaaaacaca 531
             |||||||||||||||||||||
Sbjct: 81781 aaccctcaaaaagaaaacaca 81761
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 40      ctcctcctcctcctgatcccc 60
               |||||||||||||||||||||
Sbjct: 3702646 ctcctcctcctcctgatcccc 3702666



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 40       ctcctcctcctcctgatccccacg 63
                |||||||||| |||||||||||||
Sbjct: 33301670 ctcctcctccccctgatccccacg 33301647



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 40      ctcctcctcctcctgatccccacg 63
               |||||||||||||| |||||||||
Sbjct: 5411928 ctcctcctcctcctcatccccacg 5411951
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>gb|AC073556.11| Oryza sativa chromosome 3 BAC OSJNBa0091P11 genomic sequence, complete
             sequence
          Length = 160738

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 40    ctcctcctcctcctgatcccc 60
             |||||||||||||||||||||
Sbjct: 78731 ctcctcctcctcctgatcccc 78711
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 40      ctcctcctcctcctgatcccc 60
               |||||||||||||||||||||
Sbjct: 3702757 ctcctcctcctcctgatcccc 3702777



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 40       ctcctcctcctcctgatccccacg 63
                |||||||||| |||||||||||||
Sbjct: 33392180 ctcctcctccccctgatccccacg 33392157



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 40      ctcctcctcctcctgatccccacg 63
               |||||||||||||| |||||||||
Sbjct: 5411143 ctcctcctcctcctcatccccacg 5411166
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 87      cgagcgccgcctcgccgtcgc 107
               |||||||||||||||||||||
Sbjct: 8785738 cgagcgccgcctcgccgtcgc 8785718
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>dbj|AP002817.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0699D11
          Length = 140825

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 87     cgagcgccgcctcgccgtcgc 107
              |||||||||||||||||||||
Sbjct: 103195 cgagcgccgcctcgccgtcgc 103175
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>dbj|AP001366.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0469E09
          Length = 146081

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 87    cgagcgccgcctcgccgtcgc 107
             |||||||||||||||||||||
Sbjct: 21766 cgagcgccgcctcgccgtcgc 21746
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>dbj|AK107189.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-H12, full
           insert sequence
          Length = 1882

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 40  ctcctcctcctcctgatcccc 60
           |||||||||||||||||||||
Sbjct: 137 ctcctcctcctcctgatcccc 117
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>dbj|AK102361.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033091I10, full
           insert sequence
          Length = 2132

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 87  cgagcgccgcctcgccgtcgc 107
           |||||||||||||||||||||
Sbjct: 117 cgagcgccgcctcgccgtcgc 97
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>gb|U56965.1| Caenorhabditis elegans cosmid C15H9, complete sequence
          Length = 41752

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 36    gctgctcctcctcctcctgat 56
             |||||||||||||||||||||
Sbjct: 40433 gctgctcctcctcctcctgat 40413
to top
>dbj|AK062597.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-102-E02, full
           insert sequence
          Length = 415

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 87  cgagcgccgcctcgccgtcgc 107
           |||||||||||||||||||||
Sbjct: 190 cgagcgccgcctcgccgtcgc 210
to top
>gb|AY108450.1| Zea mays PCO107841 mRNA sequence
          Length = 1160

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 86  acgagcgccgcctcgccgtcg 106
           |||||||||||||||||||||
Sbjct: 218 acgagcgccgcctcgccgtcg 198
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>gb|AC104896.13| Mus musculus chromosome 1, clone RP23-299F18, complete sequence
          Length = 184316

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 33    cgtgctgctcctcctcctcct 53
             |||||||||||||||||||||
Sbjct: 25105 cgtgctgctcctcctcctcct 25085
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>gb|AC165972.4| Mus musculus BAC clone RP23-87D12 from chromosome 17, complete sequence
          Length = 199737

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 35     tgctgctcctcctcctcctg 54
              ||||||||||||||||||||
Sbjct: 180408 tgctgctcctcctcctcctg 180427
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>gb|AC141887.5| Mus musculus BAC clone RP23-478L20 from chromosome 7, complete sequence
          Length = 163916

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    tgctgctcctcctcctcctg 54
             ||||||||||||||||||||
Sbjct: 51351 tgctgctcctcctcctcctg 51332
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>gb|AC110512.13| Mus musculus chromosome 15, clone RP24-134E9, complete sequence
          Length = 163319

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 40    ctcctcctcctcctgatccc 59
             ||||||||||||||||||||
Sbjct: 78765 ctcctcctcctcctgatccc 78784
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>ref|XM_470007.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1880

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 40  ctcctcctcctcctgatccccacg 63
           |||||||||| |||||||||||||
Sbjct: 292 ctcctcctccccctgatccccacg 269
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>ref|XM_473281.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2040

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 35 tgctgctcctcctcctcctg 54
          ||||||||||||||||||||
Sbjct: 20 tgctgctcctcctcctcctg 39
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>gb|BT016837.1| Zea mays clone Contig670 mRNA sequence
          Length = 1778

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 35  tgctgctcctcctcctcctg 54
           ||||||||||||||||||||
Sbjct: 129 tgctgctcctcctcctcctg 148
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>gb|AC139233.10| Mus musculus chromosome 19, clone RP23-265E24, complete sequence
          Length = 201429

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 268   gccaaacattcgattgagcccacggacc 295
             |||||||||| ||||||||||| |||||
Sbjct: 39308 gccaaacattggattgagcccaaggacc 39281
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>gb|AC159092.11| Mus musculus chromosome 1, clone RP23-103C13, complete sequence
          Length = 196891

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    tgctgctcctcctcctcctg 54
             ||||||||||||||||||||
Sbjct: 52208 tgctgctcctcctcctcctg 52189
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>gb|AY910750.1| Gallus gallus glycerophosphodiester phosphodiesterase 2 (GDE2) mRNA,
            complete cds
          Length = 4525

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 35   tgctgctcctcctcctcctg 54
            ||||||||||||||||||||
Sbjct: 2890 tgctgctcctcctcctcctg 2871
to top
>gb|AC127171.54| Mus musculus strain C57BL/6J clone rp23-202i7 map 10, complete sequence
          Length = 194193

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 35     tgctgctcctcctcctcctg 54
              ||||||||||||||||||||
Sbjct: 129344 tgctgctcctcctcctcctg 129325
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>gb|AC117790.23| Mus musculus chromosome 19, clone RP24-548O2, complete sequence
          Length = 197551

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 268    gccaaacattcgattgagcccacggacc 295
              |||||||||| ||||||||||| |||||
Sbjct: 148174 gccaaacattggattgagcccaaggacc 148147
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>gb|AC150551.1| Drosophila melanogaster clone BACR16A12, complete sequence
          Length = 185417

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    gtgctgctcctcctcctcct 53
             ||||||||||||||||||||
Sbjct: 84192 gtgctgctcctcctcctcct 84173
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>gb|BC014908.1| Homo sapiens stem-loop (histone) binding protein, mRNA (cDNA clone
            MGC:17041 IMAGE:3908584), complete cds
          Length = 1747

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 504  aggaaagaaccctcaaaaagaaaa 527
            ||||||||||||||||||| ||||
Sbjct: 1719 aggaaagaaccctcaaaaaaaaaa 1742
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>gb|BC015703.1| Homo sapiens stem-loop (histone) binding protein, mRNA (cDNA clone
            MGC:10175 IMAGE:3907984), complete cds
          Length = 1747

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 504  aggaaagaaccctcaaaaagaaaa 527
            ||||||||||||||||||| ||||
Sbjct: 1719 aggaaagaaccctcaaaaaaaaaa 1742
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>gb|AC165278.4| Mus musculus chromosome 15, clone RP23-250O18, complete sequence
          Length = 187758

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 35     tgctgctcctcctcctcctg 54
              ||||||||||||||||||||
Sbjct: 136441 tgctgctcctcctcctcctg 136422
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>gb|AC114986.13| Mus musculus chromosome 1, clone RP23-242G7, complete sequence
          Length = 195146

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    tgctgctcctcctcctcctg 54
             ||||||||||||||||||||
Sbjct: 90838 tgctgctcctcctcctcctg 90819
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>gb|AC164600.5| Mus musculus chromosome 1, clone RP23-366M5, complete sequence
          Length = 191581

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 68     tctccctgctactgctctac 87
              ||||||||||||||||||||
Sbjct: 143490 tctccctgctactgctctac 143509
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>gb|AC132106.4| Mus musculus BAC clone RP24-240D2 from chromosome 17, complete sequence
          Length = 169722

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    tgctgctcctcctcctcctg 54
             ||||||||||||||||||||
Sbjct: 89094 tgctgctcctcctcctcctg 89075
to top
>gb|AC135563.5| Oryza sativa chromosome 3 BAC OSJNBb0015I02 genomic sequence, complete
             sequence
          Length = 122815

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 40    ctcctcctcctcctgatccccacg 63
             |||||||||| |||||||||||||
Sbjct: 58186 ctcctcctccccctgatccccacg 58163
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>gb|BC064719.1| Xenopus tropicalis cDNA clone IMAGE:5383988, containing frame-shift
           errors
          Length = 4169

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 35  tgctgctcctcctcctcctg 54
           ||||||||||||||||||||
Sbjct: 407 tgctgctcctcctcctcctg 388
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>gb|AC113107.15| Mus musculus chromosome 10, clone RP23-325G13, complete sequence
          Length = 207239

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    tgctgctcctcctcctcctg 54
             ||||||||||||||||||||
Sbjct: 33284 tgctgctcctcctcctcctg 33303
to top
>gb|AC096226.12| Rattus norvegicus 18 BAC CH230-26M18 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 232962

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 34     gtgctgctcctcctcctcct 53
              ||||||||||||||||||||
Sbjct: 109542 gtgctgctcctcctcctcct 109561
to top
>gb|AC122232.3| Mus musculus BAC clone RP23-136G1 from chromosome 7, complete sequence
          Length = 182272

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    tgctgctcctcctcctcctg 54
             ||||||||||||||||||||
Sbjct: 46303 tgctgctcctcctcctcctg 46322
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>gb|AC113554.9| Homo sapiens chromosome 17, clone CTD-2501B8, complete sequence
          Length = 179509

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    gctgctcctcctcctcctga 55
             ||||||||||||||||||||
Sbjct: 73448 gctgctcctcctcctcctga 73467
to top
>gb|AC116998.3| Mus musculus BAC clone RP23-16F6 from 18, complete sequence
          Length = 216959

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 35     tgctgctcctcctcctcctg 54
              ||||||||||||||||||||
Sbjct: 187814 tgctgctcctcctcctcctg 187833
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>emb|CR652300.2|CNS0F2AA Tetraodon nigroviridis full-length cDNA
          Length = 1151

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 34  gtgctgctcctcctcctcct 53
           ||||||||||||||||||||
Sbjct: 253 gtgctgctcctcctcctcct 234
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>gb|AC183502.5| Medicago truncatula clone mth2-75g17, complete sequence
          Length = 121928

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 508   aagaaccctcaaaaagaaaa 527
             ||||||||||||||||||||
Sbjct: 33427 aagaaccctcaaaaagaaaa 33446
to top
>gb|AC146702.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0009J13, from chromosome 3, complete sequence
          Length = 147205

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 40     ctcctcctcctcctgatccccacg 63
              |||||||||||||| |||||||||
Sbjct: 118096 ctcctcctcctcctcatccccacg 118119
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>gb|AC140549.12| Medicago truncatula clone mth2-28o14, complete sequence
          Length = 139778

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 37    ctgctcctcctcctcctgatcccc 60
             ||||||||||||||||| ||||||
Sbjct: 34468 ctgctcctcctcctcctcatcccc 34491
to top
>ref|NM_006527.2| Homo sapiens stem-loop (histone) binding protein (SLBP), mRNA
          Length = 1743

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 504  aggaaagaaccctcaaaaagaaaa 527
            ||||||||||||||||||| ||||
Sbjct: 1712 aggaaagaaccctcaaaaaaaaaa 1735
to top
>emb|AL590128.11| Human DNA sequence from clone RP11-312B8 on chromosome 1 Contains a novel
              gene, the 5' end of the CAMTA1 gene for calmodulin binding
              transcription activator 1, a ribosomal protein L37 (RPL37)
              pseudogene and a CpG island, complete sequence
          Length = 204394

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 183    aactgcgtttcctctggaaa 202
              ||||||||||||||||||||
Sbjct: 190760 aactgcgtttcctctggaaa 190779
to top
>gb|AC091158.11| Mus musculus Strain C57BL6/J chromosome 6 BAC, RP23-109E8, Complete
              Sequence, complete sequence
          Length = 195048

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 35     tgctgctcctcctcctcctg 54
              ||||||||||||||||||||
Sbjct: 148615 tgctgctcctcctcctcctg 148634
to top
>gb|AC160391.2| Mus musculus BAC clone RP24-235G7 from chromosome 12, complete sequence
          Length = 186582

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 35     tgctgctcctcctcctcctg 54
              ||||||||||||||||||||
Sbjct: 136645 tgctgctcctcctcctcctg 136626
to top
>emb|AL662984.3|OSJN00183 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0081C01,
             complete sequence
          Length = 140454

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    tgctgctcctcctcctcctg 54
             ||||||||||||||||||||
Sbjct: 86809 tgctgctcctcctcctcctg 86828
to top
>gb|AC010666.4| Drosophila melanogaster 3L BAC RP98-22O21 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 175519

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 39    gctcctcctcctcctgatcc 58
             ||||||||||||||||||||
Sbjct: 44296 gctcctcctcctcctgatcc 44277
to top
>gb|AC123568.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
            OJ1345H02, from chromosome 3, complete sequence
          Length = 145290

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 40   ctcctcctcctcctgatccccacg 63
            |||||||||||||| |||||||||
Sbjct: 8522 ctcctcctcctcctcatccccacg 8545
to top
>gb|AY113407.1| Drosophila melanogaster RE13370 full insert cDNA
          Length = 1337

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 39  gctcctcctcctcctgatcc 58
           ||||||||||||||||||||
Sbjct: 809 gctcctcctcctcctgatcc 790
to top
>ref|NM_141151.2| Drosophila melanogaster CG11370-RA (CG11370), mRNA
          Length = 1324

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 39  gctcctcctcctcctgatcc 58
           ||||||||||||||||||||
Sbjct: 809 gctcctcctcctcctgatcc 790
to top
>ref|NM_134680.1| Drosophila melanogaster BBS2 CG13691-RA (BBS2), mRNA
          Length = 1650

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 34  gtgctgctcctcctcctcct 53
           ||||||||||||||||||||
Sbjct: 174 gtgctgctcctcctcctcct 155
to top
>gb|AC115482.2| Drosophila melanogaster, chromosome 2L, region 21D-21D, BAC clone
             BACR04A24, complete sequence
          Length = 166677

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    gtgctgctcctcctcctcct 53
             ||||||||||||||||||||
Sbjct: 89622 gtgctgctcctcctcctcct 89603
to top
>gb|AC009247.13|AC009247 Homo sapiens 3q27  BAC RP11-410F19 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 146376

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 333   ttctgagatcacttctggtg 352
             ||||||||||||||||||||
Sbjct: 27526 ttctgagatcacttctggtg 27507
to top
>gb|AC175205.2| Sporobolomyces roseus clone JGIBAIF-5L1, complete sequence
          Length = 36144

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 39   gctcctcctcctcctgatcc 58
            ||||||||||||||||||||
Sbjct: 3158 gctcctcctcctcctgatcc 3139
to top
>dbj|AK165091.1| Mus musculus 2 days pregnant adult female ovary cDNA, RIKEN
           full-length enriched library, clone:E330005N03
           product:unclassifiable, full insert sequence
          Length = 2856

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 321 taacagggtactttctgagatcac 344
           |||||||||||||| |||||||||
Sbjct: 180 taacagggtactttgtgagatcac 203
to top
>emb|CR523530.1| Gallus gallus finished cDNA, clone ChEST526i4
          Length = 1419

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 511 aaccctcaaaaagaaaacac 530
           ||||||||||||||||||||
Sbjct: 648 aaccctcaaaaagaaaacac 629
to top
>gb|DP000003.1| Atelerix albiventris target 1 genomic scaffold
          Length = 2136267

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 35     tgctgctcctcctcctcctg 54
              ||||||||||||||||||||
Sbjct: 902170 tgctgctcctcctcctcctg 902189
to top
>dbj|AK170125.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630020A17
           product:unclassifiable, full insert sequence
          Length = 2215

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 321 taacagggtactttctgagatcac 344
           |||||||||||||| |||||||||
Sbjct: 180 taacagggtactttgtgagatcac 203
to top
>gb|AC152401.6| Mus musculus chromosome 3, clone RP23-287A2, complete sequence
          Length = 217151

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 404    aggcacaggatggtggtttg 423
              ||||||||||||||||||||
Sbjct: 211535 aggcacaggatggtggtttg 211554
to top
>dbj|AB169818.1| Macaca fascicularis brain cDNA, clone: QflA-10529, similar to human
            nudE nuclear distribution gene E homolog like 1
            (A.nidulans) (NDEL1), mRNA, RefSeq: NM_030808.2
          Length = 2421

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 39   gctcctcctcctcctgatcc 58
            ||||||||||||||||||||
Sbjct: 1174 gctcctcctcctcctgatcc 1193
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 35       tgctgctcctcctcctcctg 54
                ||||||||||||||||||||
Sbjct: 26549923 tgctgctcctcctcctcctg 26549942
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 40       ctcctcctcctcctgatccccacg 63
                |||||||||||||| |||||||||
Sbjct: 35193381 ctcctcctcctcctcatccccacg 35193358
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>gb|AC079818.56| Mus musculus strain C57BL/6J chromosome 10 clone rp23-362c8, complete
              sequence
          Length = 238658

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 35     tgctgctcctcctcctcctg 54
              ||||||||||||||||||||
Sbjct: 160211 tgctgctcctcctcctcctg 160230
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>gb|AC139844.11| Mus musculus chromosome 15, clone RP23-342B21, complete sequence
          Length = 192176

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 40     ctcctcctcctcctgatccc 59
              ||||||||||||||||||||
Sbjct: 190884 ctcctcctcctcctgatccc 190903
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>gb|AC153942.8| Mus musculus 10 BAC RP24-174M19 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 146201

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    tgctgctcctcctcctcctg 54
             ||||||||||||||||||||
Sbjct: 23877 tgctgctcctcctcctcctg 23858
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>gb|AC156831.2| Mus musculus BAC clone RP24-276N6 from chromosome 9, complete sequence
          Length = 152361

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    tgctgctcctcctcctcctg 54
             ||||||||||||||||||||
Sbjct: 57709 tgctgctcctcctcctcctg 57728
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>gb|AC104429.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0006P09,
              complete sequence
          Length = 153950

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 40     ctcctcctcctcctgatccccacg 63
              |||||||||||||| |||||||||
Sbjct: 141572 ctcctcctcctcctcatccccacg 141595
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>gb|AC108670.10| Homo sapiens 3 BAC RP11-218A22 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 163157

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 333   ttctgagatcacttctggtg 352
             ||||||||||||||||||||
Sbjct: 31977 ttctgagatcacttctggtg 31996
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>dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
            clone:P0474F11
          Length = 139544

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 40   ctcctcctcctcctgatccccacg 63
            |||||||||||||| |||||||||
Sbjct: 5431 ctcctcctcctcctcatccccacg 5408
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>dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1202_E07
          Length = 145014

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 40    ctcctcctcctcctgatccccacg 63
             |||||||||||||| |||||||||
Sbjct: 88737 ctcctcctcctcctcatccccacg 88714
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>gb|AC150625.3| Atelerix albiventris clone LB4-57B20, complete sequence
          Length = 81183

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    tgctgctcctcctcctcctg 54
             ||||||||||||||||||||
Sbjct: 35684 tgctgctcctcctcctcctg 35703
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>ref|XM_318413.2| Anopheles gambiae str. PEST ENSANGP00000015957
          (ENSANGG00000013468), partial mRNA
          Length = 2748

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 35 tgctgctcctcctcctcctg 54
          ||||||||||||||||||||
Sbjct: 71 tgctgctcctcctcctcctg 52
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>dbj|AK107678.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-132-A04, full
            insert sequence
          Length = 2366

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 35   tgctgctcctcctcctcctg 54
            ||||||||||||||||||||
Sbjct: 2212 tgctgctcctcctcctcctg 2193
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>dbj|AK102285.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033089I06, full
           insert sequence
          Length = 2454

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 35  tgctgctcctcctcctcctg 54
           ||||||||||||||||||||
Sbjct: 235 tgctgctcctcctcctcctg 254
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>dbj|AK100921.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133N20, full
           insert sequence
          Length = 3158

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 40  ctcctcctcctcctgatccccacg 63
           |||||||||||||| |||||||||
Sbjct: 369 ctcctcctcctcctcatccccacg 392
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>dbj|AK070370.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049F22, full
           insert sequence
          Length = 1881

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 40  ctcctcctcctcctgatccccacg 63
           |||||||||||||| |||||||||
Sbjct: 544 ctcctcctcctcctcatccccacg 521
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>gb|AC121887.4| Mus musculus BAC clone RP24-142B15 from 5, complete sequence
          Length = 234919

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    tgctgctcctcctcctcctg 54
             ||||||||||||||||||||
Sbjct: 30740 tgctgctcctcctcctcctg 30759
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>gb|AY107128.1| Zea mays PCO069400 mRNA sequence
          Length = 1375

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 35  tgctgctcctcctcctcctg 54
           ||||||||||||||||||||
Sbjct: 193 tgctgctcctcctcctcctg 174
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>gb|AE003598.2| Drosophila melanogaster chromosome 3L, section 79 of 83 of the complete
              sequence
          Length = 303370

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 39     gctcctcctcctcctgatcc 58
              ||||||||||||||||||||
Sbjct: 223932 gctcctcctcctcctgatcc 223913
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>gb|AE003589.4| Drosophila melanogaster chromosome 2L, section 2 of 83 of the complete
              sequence
          Length = 306076

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 34     gtgctgctcctcctcctcct 53
              ||||||||||||||||||||
Sbjct: 117785 gtgctgctcctcctcctcct 117766
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>dbj|AB073081.2| Zea mays mRNA for uncleaved legumin-1, complete cds
          Length = 1726

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 35  tgctgctcctcctcctcctg 54
           ||||||||||||||||||||
Sbjct: 88  tgctgctcctcctcctcctg 107
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>gb|AC005762.1|AC005762 Drosophila melanogaster DNA sequence (P1s DS00679 (D272) and DS05054
             (D135)), complete sequence
          Length = 81053

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    gtgctgctcctcctcctcct 53
             ||||||||||||||||||||
Sbjct: 63011 gtgctgctcctcctcctcct 62992
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>emb|AL844840.8| Mouse DNA sequence from clone RP23-337P9 on chromosome 2, complete
             sequence
          Length = 219568

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    tgctgctcctcctcctcctg 54
             ||||||||||||||||||||
Sbjct: 15861 tgctgctcctcctcctcctg 15880
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>ref|NM_001037271.1| Gallus gallus glycerophosphodiester phosphodiesterase domain
            containing 5 (GDPD5), mRNA
          Length = 4525

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 35   tgctgctcctcctcctcctg 54
            ||||||||||||||||||||
Sbjct: 2890 tgctgctcctcctcctcctg 2871
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>gb|AC157825.3| Mus musculus BAC clone RP23-230M23 from chromosome 16, complete
             sequence
          Length = 207864

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    tgctgctcctcctcctcctg 54
             ||||||||||||||||||||
Sbjct: 47062 tgctgctcctcctcctcctg 47043



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    tgctgctcctcctcctcctg 54
             ||||||||||||||||||||
Sbjct: 46885 tgctgctcctcctcctcctg 46866



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    tgctgctcctcctcctcctg 54
             ||||||||||||||||||||
Sbjct: 46864 tgctgctcctcctcctcctg 46845



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    tgctgctcctcctcctcctg 54
             ||||||||||||||||||||
Sbjct: 46626 tgctgctcctcctcctcctg 46607



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    tgctgctcctcctcctcctg 54
             ||||||||||||||||||||
Sbjct: 46605 tgctgctcctcctcctcctg 46586
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>gb|AC161039.6| Mus musculus chromosome 18, clone RP24-327J14, complete sequence
          Length = 183341

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    tgctgctcctcctcctcctg 54
             ||||||||||||||||||||
Sbjct: 71978 tgctgctcctcctcctcctg 71997
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>gb|AC132111.4| Mus musculus BAC clone RP24-200H19 from 14, complete sequence
          Length = 174164

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    tgctgctcctcctcctcctg 54
             ||||||||||||||||||||
Sbjct: 42255 tgctgctcctcctcctcctg 42236
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>gb|AC170878.4| Mus musculus BAC clone RP24-226F17 from chromosome 19, complete sequence
          Length = 148454

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 37     ctgctcctcctcctcctgat 56
              ||||||||||||||||||||
Sbjct: 131827 ctgctcctcctcctcctgat 131846



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 37     ctgctcctcctcctcctgat 56
              ||||||||||||||||||||
Sbjct: 131523 ctgctcctcctcctcctgat 131542
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>gb|AC125134.3| Mus musculus BAC clone RP24-316C22 from 1, complete sequence
          Length = 188348

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 35     tgctgctcctcctcctcctg 54
              ||||||||||||||||||||
Sbjct: 140480 tgctgctcctcctcctcctg 140461
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>emb|CT010565.14| Mouse DNA sequence from clone RP23-263E11 on chromosome 16, complete
             sequence
          Length = 200242

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    tgctgctcctcctcctcctg 54
             ||||||||||||||||||||
Sbjct: 54224 tgctgctcctcctcctcctg 54243



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    tgctgctcctcctcctcctg 54
             ||||||||||||||||||||
Sbjct: 54203 tgctgctcctcctcctcctg 54222



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    tgctgctcctcctcctcctg 54
             ||||||||||||||||||||
Sbjct: 54026 tgctgctcctcctcctcctg 54045



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    tgctgctcctcctcctcctg 54
             ||||||||||||||||||||
Sbjct: 54005 tgctgctcctcctcctcctg 54024



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    tgctgctcctcctcctcctg 54
             ||||||||||||||||||||
Sbjct: 53927 tgctgctcctcctcctcctg 53946



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    tgctgctcctcctcctcctg 54
             ||||||||||||||||||||
Sbjct: 53840 tgctgctcctcctcctcctg 53859



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    tgctgctcctcctcctcctg 54
             ||||||||||||||||||||
Sbjct: 53807 tgctgctcctcctcctcctg 53826



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    tgctgctcctcctcctcctg 54
             ||||||||||||||||||||
Sbjct: 53633 tgctgctcctcctcctcctg 53652



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    tgctgctcctcctcctcctg 54
             ||||||||||||||||||||
Sbjct: 53600 tgctgctcctcctcctcctg 53619



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    tgctgctcctcctcctcctg 54
             ||||||||||||||||||||
Sbjct: 53453 tgctgctcctcctcctcctg 53472



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    tgctgctcctcctcctcctg 54
             ||||||||||||||||||||
Sbjct: 53387 tgctgctcctcctcctcctg 53406
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>gb|U75679.1|U75679 Human histone stem-loop binding protein (SLBP) mRNA, complete cds
          Length = 1743

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 504  aggaaagaaccctcaaaaagaaaa 527
            ||||||||||||||||||| ||||
Sbjct: 1712 aggaaagaaccctcaaaaaaaaaa 1735
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>gb|AC148020.3| Mus musculus BAC clone RP23-6A22 from 18, complete sequence
          Length = 238892

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 35     tgctgctcctcctcctcctg 54
              ||||||||||||||||||||
Sbjct: 161128 tgctgctcctcctcctcctg 161109
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>gb|AC122183.4| Mus musculus BAC clone RP23-14P23 from 3, complete sequence
          Length = 210223

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 404   aggcacaggatggtggtttg 423
             ||||||||||||||||||||
Sbjct: 43879 aggcacaggatggtggtttg 43898
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>gb|AC140409.3| Mus musculus BAC clone RP23-138K22 from 9, complete sequence
          Length = 200157

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 202    actgtgagttctttgaagga 221
              ||||||||||||||||||||
Sbjct: 200090 actgtgagttctttgaagga 200109
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>gb|AC118547.41| Mus musculus strain C57BL/6J clone rp23-3g4 map 17, complete sequence
          Length = 234061

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 35     tgctgctcctcctcctcctg 54
              ||||||||||||||||||||
Sbjct: 210770 tgctgctcctcctcctcctg 210751
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>gb|AC138622.4| Mus musculus BAC clone RP23-100J15 from chromosome 6, complete sequence
          Length = 194611

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    tgctgctcctcctcctcctg 54
             ||||||||||||||||||||
Sbjct: 10423 tgctgctcctcctcctcctg 10442



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    tgctgctcctcctcctcctg 54
             ||||||||||||||||||||
Sbjct: 10189 tgctgctcctcctcctcctg 10208
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>gb|AC164565.1| Mus musculus BAC clone RP23-99O13 from chromosome 9, complete sequence
          Length = 227367

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 321   taacagggtactttctgagatcac 344
             |||||||||||||| |||||||||
Sbjct: 85053 taacagggtactttgtgagatcac 85076
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>dbj|AB007501.1| Oryza sativa (japonica cultivar-group) mRNA for squalene synthase,
           complete cds
          Length = 1875

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 40  ctcctcctcctcctgatccccacg 63
           |||||||||| |||||||||||||
Sbjct: 287 ctcctcctccccctgatccccacg 264


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,883,287
Number of Sequences: 3902068
Number of extensions: 5883287
Number of successful extensions: 449268
Number of sequences better than 10.0: 119
Number of HSP's better than 10.0 without gapping: 123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 445661
Number of HSP's gapped (non-prelim): 3596
length of query: 531
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 508
effective length of database: 17,143,297,704
effective search space: 8708795233632
effective search space used: 8708795233632
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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