| Clone Name | basd19o04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_472636.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1959 Score = 525 bits (265), Expect = e-146 Identities = 430/485 (88%) Strand = Plus / Plus Query: 25 attgtgaaagaacgtgaagggaagaggcctcttttaaacggtgatatccatgtgacactt 84 |||||||||||||||||||||||||| |||||||||| ||||| |||| ||||| || Sbjct: 535 attgtgaaagaacgtgaagggaagagacctcttttaactggtgacctccaggtgactctc 594 Query: 85 aaagaaggcgtagggaccataggagagcttatcttcactgacaattccagctggataagg 144 |||||||| |||||||| || |||||||||||||||||||||||||| ||||||||||| Sbjct: 595 aaagaaggtgtagggacgattggagagcttatcttcactgacaattcaagctggataaga 654 Query: 145 agcagaaaattcagacttgggatgagagtctcttcaggattttgtgacggaattcgtatc 204 ||||| ||||| |||||||| || |||||||||||||||||||||| || | ||| | Sbjct: 655 agcaggaaatttagacttggtttgcgagtctcttcaggattttgtgaaggtgtccgtgtt 714 Query: 205 aaagaggcgaagacagaggcttttactgtgaaagatcacagaggagaattgtacaagaaa 264 || |||||||| || |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 715 aaggaggcgaaaacggaggcttttactgttaaagatcacagaggagaattgtacaagaaa 774 Query: 265 cattaccctcctgcgcttaaggatgatgtttggagactggaaaagattggaaaggacggt 324 || ||||||||||| || |||||||||||||||||| |||| |||||||||||||| ||| Sbjct: 775 cactaccctcctgccctaaaggatgatgtttggagattggagaagattggaaaggatggt 834 Query: 325 gcattccacgggaaactaaactcaaacggaatctatacagttgaacattttcttcaactt 384 ||||| ||| ||| ||||||||||| ||||| || |||||||||||||||||||||||| Sbjct: 835 gcatttcacaagaagctaaactcaaatggaatatacacagttgaacattttcttcaactt 894 Query: 385 cttgttaaagatcaacagaagttaagaagtatccttggtactggcatgtcaaataagatg 444 ||||||| ||||||||||||| |||||| ||| ||||| | | |||||||||||||||| Sbjct: 895 cttgttagagatcaacagaagctaagaactattcttggcagtaacatgtcaaataagatg 954 Query: 445 tgggaaagtcttgttgaacatgcaaaaacttgtgttctgagtggcaaacattatatatat 504 ||||||||||||||||| ||||| || || |||||| ||||||||||||| ||||||||| Sbjct: 955 tgggaaagtcttgttgagcatgcgaagacatgtgttttgagtggcaaacactatatatat 1014 Query: 505 tactc 509 ||||| Sbjct: 1015 tactc 1019
>dbj|AK072545.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131N23, full insert sequence Length = 2535 Score = 525 bits (265), Expect = e-146 Identities = 430/485 (88%) Strand = Plus / Plus Query: 25 attgtgaaagaacgtgaagggaagaggcctcttttaaacggtgatatccatgtgacactt 84 |||||||||||||||||||||||||| |||||||||| ||||| |||| ||||| || Sbjct: 723 attgtgaaagaacgtgaagggaagagacctcttttaactggtgacctccaggtgactctc 782 Query: 85 aaagaaggcgtagggaccataggagagcttatcttcactgacaattccagctggataagg 144 |||||||| |||||||| || |||||||||||||||||||||||||| ||||||||||| Sbjct: 783 aaagaaggtgtagggacgattggagagcttatcttcactgacaattcaagctggataaga 842 Query: 145 agcagaaaattcagacttgggatgagagtctcttcaggattttgtgacggaattcgtatc 204 ||||| ||||| |||||||| || |||||||||||||||||||||| || | ||| | Sbjct: 843 agcaggaaatttagacttggtttgcgagtctcttcaggattttgtgaaggtgtccgtgtt 902 Query: 205 aaagaggcgaagacagaggcttttactgtgaaagatcacagaggagaattgtacaagaaa 264 || |||||||| || |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 903 aaggaggcgaaaacggaggcttttactgttaaagatcacagaggagaattgtacaagaaa 962 Query: 265 cattaccctcctgcgcttaaggatgatgtttggagactggaaaagattggaaaggacggt 324 || ||||||||||| || |||||||||||||||||| |||| |||||||||||||| ||| Sbjct: 963 cactaccctcctgccctaaaggatgatgtttggagattggagaagattggaaaggatggt 1022 Query: 325 gcattccacgggaaactaaactcaaacggaatctatacagttgaacattttcttcaactt 384 ||||| ||| ||| ||||||||||| ||||| || |||||||||||||||||||||||| Sbjct: 1023 gcatttcacaagaagctaaactcaaatggaatatacacagttgaacattttcttcaactt 1082 Query: 385 cttgttaaagatcaacagaagttaagaagtatccttggtactggcatgtcaaataagatg 444 ||||||| ||||||||||||| |||||| ||| ||||| | | |||||||||||||||| Sbjct: 1083 cttgttagagatcaacagaagctaagaactattcttggcagtaacatgtcaaataagatg 1142 Query: 445 tgggaaagtcttgttgaacatgcaaaaacttgtgttctgagtggcaaacattatatatat 504 ||||||||||||||||| ||||| || || |||||| ||||||||||||| ||||||||| Sbjct: 1143 tgggaaagtcttgttgagcatgcgaagacatgtgttttgagtggcaaacactatatatat 1202 Query: 505 tactc 509 ||||| Sbjct: 1203 tactc 1207
>ref|XM_466263.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2473 Score = 293 bits (148), Expect = 3e-76 Identities = 379/456 (83%) Strand = Plus / Plus Query: 24 cattgtgaaagaacgtgaagggaagaggcctcttttaaacggtgatatccatgtgacact 83 |||||| || || |||||||||||||| |||||||| | ||||| | || ||||| || Sbjct: 767 cattgtcaaggagcgtgaagggaagagacctcttttgacaggtgaccttcaggtgaccct 826 Query: 84 taaagaaggcgtagggaccataggagagcttatcttcactgacaattccagctggataag 143 ||||||||| || || |||||||| |||||||| |||||||| || |||||||||||||| Sbjct: 827 taaagaaggtgttggaaccataggggagcttattttcactgataactccagctggataag 886 Query: 144 gagcagaaaattcagacttgggatgagagtctcttcaggattttgtgacggaattcgtat 203 |||||||||||||| |||||| |||| || | |||| | || ||| || |||||| | Sbjct: 887 aagcagaaaattcaggcttgggctgagggttgccccagggtcttttgaaggtattcgtgt 946 Query: 204 caaagaggcgaagacagaggcttttactgtgaaagatcacagaggagaattgtacaagaa 263 | |||||||||||||| ||||||||||| || ||||||||||| ||||||||||| || Sbjct: 947 tagggaggcgaagacagaagcttttactgttaaggatcacagaggggaattgtacaaaaa 1006 Query: 264 acattaccctcctgcgcttaaggatgatgtttggagactggaaaagattggaaaggacgg 323 || || || ||||| || |||||||||||||||||| | ||||||||||| ||||| || Sbjct: 1007 gcactatccacctgccctaaaggatgatgtttggagattagaaaagattggcaaggatgg 1066 Query: 324 tgcattccacgggaaactaaactcaaacggaatctatacagttgaacattttcttcaact 383 |||||||||| ||| |||| ||| || || |||||||||||| ||||||| || || Sbjct: 1067 tgcattccacaagaagttaaatgcaagtgggatttatacagttgaagattttctccagct 1126 Query: 384 tcttgttaaagatcaacagaagttaagaagtatccttggtactggcatgtcaaataagat 443 |||||| || ||||| |||| |||| | ||||| ||||| | ||| |||||||||||||| Sbjct: 1127 tcttgtcaaggatcagcagaggttacggagtattcttggcagtggaatgtcaaataagat 1186 Query: 444 gtgggaaagtcttgttgaacatgcaaaaacttgtgt 479 ||||||||| |||||||| |||||||| |||||||| Sbjct: 1187 gtgggaaagccttgttgagcatgcaaagacttgtgt 1222
>dbj|AK073250.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033023A22, full insert sequence Length = 2474 Score = 293 bits (148), Expect = 3e-76 Identities = 379/456 (83%) Strand = Plus / Plus Query: 24 cattgtgaaagaacgtgaagggaagaggcctcttttaaacggtgatatccatgtgacact 83 |||||| || || |||||||||||||| |||||||| | ||||| | || ||||| || Sbjct: 767 cattgtcaaggagcgtgaagggaagagacctcttttgacaggtgaccttcaggtgaccct 826 Query: 84 taaagaaggcgtagggaccataggagagcttatcttcactgacaattccagctggataag 143 ||||||||| || || |||||||| |||||||| |||||||| || |||||||||||||| Sbjct: 827 taaagaaggtgttggaaccataggggagcttattttcactgataactccagctggataag 886 Query: 144 gagcagaaaattcagacttgggatgagagtctcttcaggattttgtgacggaattcgtat 203 |||||||||||||| |||||| |||| || | |||| | || ||| || |||||| | Sbjct: 887 aagcagaaaattcaggcttgggctgagggttgccccagggtcttttgaaggtattcgtgt 946 Query: 204 caaagaggcgaagacagaggcttttactgtgaaagatcacagaggagaattgtacaagaa 263 | |||||||||||||| ||||||||||| || ||||||||||| ||||||||||| || Sbjct: 947 tagggaggcgaagacagaagcttttactgttaaggatcacagaggggaattgtacaaaaa 1006 Query: 264 acattaccctcctgcgcttaaggatgatgtttggagactggaaaagattggaaaggacgg 323 || || || ||||| || |||||||||||||||||| | ||||||||||| ||||| || Sbjct: 1007 gcactatccacctgccctaaaggatgatgtttggagattagaaaagattggcaaggatgg 1066 Query: 324 tgcattccacgggaaactaaactcaaacggaatctatacagttgaacattttcttcaact 383 |||||||||| ||| |||| ||| || || |||||||||||| ||||||| || || Sbjct: 1067 tgcattccacaagaagttaaatgcaagtgggatttatacagttgaagattttctccagct 1126 Query: 384 tcttgttaaagatcaacagaagttaagaagtatccttggtactggcatgtcaaataagat 443 |||||| || ||||| |||| |||| | ||||| ||||| | ||| |||||||||||||| Sbjct: 1127 tcttgtcaaggatcagcagaggttacggagtattcttggcagtggaatgtcaaataagat 1186 Query: 444 gtgggaaagtcttgttgaacatgcaaaaacttgtgt 479 ||||||||| |||||||| |||||||| |||||||| Sbjct: 1187 gtgggaaagccttgttgagcatgcaaagacttgtgt 1222
>emb|AL731606.2|OSJN00249 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0058G03, complete sequence Length = 46422 Score = 232 bits (117), Expect = 9e-58 Identities = 201/229 (87%) Strand = Plus / Plus Query: 25 attgtgaaagaacgtgaagggaagaggcctcttttaaacggtgatatccatgtgacactt 84 |||||||||||||||||||||||||| |||||||||| ||||| |||| ||||| || Sbjct: 26248 attgtgaaagaacgtgaagggaagagacctcttttaactggtgacctccaggtgactctc 26307 Query: 85 aaagaaggcgtagggaccataggagagcttatcttcactgacaattccagctggataagg 144 |||||||| |||||||| || |||||||||||||||||||||||||| ||||||||||| Sbjct: 26308 aaagaaggtgtagggacgattggagagcttatcttcactgacaattcaagctggataaga 26367 Query: 145 agcagaaaattcagacttgggatgagagtctcttcaggattttgtgacggaattcgtatc 204 ||||| ||||| |||||||| || |||||||||||||||||||||| || | ||| | Sbjct: 26368 agcaggaaatttagacttggtttgcgagtctcttcaggattttgtgaaggtgtccgtgtt 26427 Query: 205 aaagaggcgaagacagaggcttttactgtgaaagatcacagaggagaat 253 || |||||||| || |||||||||||||| ||||||||||||||||||| Sbjct: 26428 aaggaggcgaaaacggaggcttttactgttaaagatcacagaggagaat 26476 Score = 196 bits (99), Expect = 5e-47 Identities = 144/159 (90%) Strand = Plus / Plus Query: 254 tgtacaagaaacattaccctcctgcgcttaaggatgatgtttggagactggaaaagattg 313 ||||||||||||| ||||||||||| || |||||||||||||||||| |||| ||||||| Sbjct: 26560 tgtacaagaaacactaccctcctgccctaaaggatgatgtttggagattggagaagattg 26619 Query: 314 gaaaggacggtgcattccacgggaaactaaactcaaacggaatctatacagttgaacatt 373 ||||||| |||||||| ||| ||| ||||||||||| ||||| || ||||||||||||| Sbjct: 26620 gaaaggatggtgcatttcacaagaagctaaactcaaatggaatatacacagttgaacatt 26679 Query: 374 ttcttcaacttcttgttaaagatcaacagaagttaagaa 412 |||||||||||||||||| ||||||||||||| |||||| Sbjct: 26680 ttcttcaacttcttgttagagatcaacagaagctaagaa 26718 Score = 113 bits (57), Expect = 6e-22 Identities = 75/81 (92%) Strand = Plus / Plus Query: 429 catgtcaaataagatgtgggaaagtcttgttgaacatgcaaaaacttgtgttctgagtgg 488 ||||||||||||||||||||||||||||||||| ||||| || || |||||| ||||||| Sbjct: 26824 catgtcaaataagatgtgggaaagtcttgttgagcatgcgaagacatgtgttttgagtgg 26883 Query: 489 caaacattatatatattactc 509 |||||| |||||||||||||| Sbjct: 26884 caaacactatatatattactc 26904
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 232 bits (117), Expect = 9e-58 Identities = 201/229 (87%) Strand = Plus / Plus Query: 25 attgtgaaagaacgtgaagggaagaggcctcttttaaacggtgatatccatgtgacactt 84 |||||||||||||||||||||||||| |||||||||| ||||| |||| ||||| || Sbjct: 22127767 attgtgaaagaacgtgaagggaagagacctcttttaactggtgacctccaggtgactctc 22127826 Query: 85 aaagaaggcgtagggaccataggagagcttatcttcactgacaattccagctggataagg 144 |||||||| |||||||| || |||||||||||||||||||||||||| ||||||||||| Sbjct: 22127827 aaagaaggtgtagggacgattggagagcttatcttcactgacaattcaagctggataaga 22127886 Query: 145 agcagaaaattcagacttgggatgagagtctcttcaggattttgtgacggaattcgtatc 204 ||||| ||||| |||||||| || |||||||||||||||||||||| || | ||| | Sbjct: 22127887 agcaggaaatttagacttggtttgcgagtctcttcaggattttgtgaaggtgtccgtgtt 22127946 Query: 205 aaagaggcgaagacagaggcttttactgtgaaagatcacagaggagaat 253 || |||||||| || |||||||||||||| ||||||||||||||||||| Sbjct: 22127947 aaggaggcgaaaacggaggcttttactgttaaagatcacagaggagaat 22127995 Score = 196 bits (99), Expect = 5e-47 Identities = 144/159 (90%) Strand = Plus / Plus Query: 254 tgtacaagaaacattaccctcctgcgcttaaggatgatgtttggagactggaaaagattg 313 ||||||||||||| ||||||||||| || |||||||||||||||||| |||| ||||||| Sbjct: 22128079 tgtacaagaaacactaccctcctgccctaaaggatgatgtttggagattggagaagattg 22128138 Query: 314 gaaaggacggtgcattccacgggaaactaaactcaaacggaatctatacagttgaacatt 373 ||||||| |||||||| ||| ||| ||||||||||| ||||| || ||||||||||||| Sbjct: 22128139 gaaaggatggtgcatttcacaagaagctaaactcaaatggaatatacacagttgaacatt 22128198 Query: 374 ttcttcaacttcttgttaaagatcaacagaagttaagaa 412 |||||||||||||||||| ||||||||||||| |||||| Sbjct: 22128199 ttcttcaacttcttgttagagatcaacagaagctaagaa 22128237 Score = 113 bits (57), Expect = 6e-22 Identities = 75/81 (92%) Strand = Plus / Plus Query: 429 catgtcaaataagatgtgggaaagtcttgttgaacatgcaaaaacttgtgttctgagtgg 488 ||||||||||||||||||||||||||||||||| ||||| || || |||||| ||||||| Sbjct: 22128343 catgtcaaataagatgtgggaaagtcttgttgagcatgcgaagacatgtgttttgagtgg 22128402 Query: 489 caaacattatatatattactc 509 |||||| |||||||||||||| Sbjct: 22128403 caaacactatatatattactc 22128423
>gb|AC157500.1| Oryza sativa (japonica cultivar-group) BAC clone OSJNBb0056O04, from chromosome 4, complete sequence Length = 90825 Score = 232 bits (117), Expect = 9e-58 Identities = 201/229 (87%) Strand = Plus / Plus Query: 25 attgtgaaagaacgtgaagggaagaggcctcttttaaacggtgatatccatgtgacactt 84 |||||||||||||||||||||||||| |||||||||| ||||| |||| ||||| || Sbjct: 52273 attgtgaaagaacgtgaagggaagagacctcttttaactggtgacctccaggtgactctc 52332 Query: 85 aaagaaggcgtagggaccataggagagcttatcttcactgacaattccagctggataagg 144 |||||||| |||||||| || |||||||||||||||||||||||||| ||||||||||| Sbjct: 52333 aaagaaggtgtagggacgattggagagcttatcttcactgacaattcaagctggataaga 52392 Query: 145 agcagaaaattcagacttgggatgagagtctcttcaggattttgtgacggaattcgtatc 204 ||||| ||||| |||||||| || |||||||||||||||||||||| || | ||| | Sbjct: 52393 agcaggaaatttagacttggtttgcgagtctcttcaggattttgtgaaggtgtccgtgtt 52452 Query: 205 aaagaggcgaagacagaggcttttactgtgaaagatcacagaggagaat 253 || |||||||| || |||||||||||||| ||||||||||||||||||| Sbjct: 52453 aaggaggcgaaaacggaggcttttactgttaaagatcacagaggagaat 52501 Score = 196 bits (99), Expect = 5e-47 Identities = 144/159 (90%) Strand = Plus / Plus Query: 254 tgtacaagaaacattaccctcctgcgcttaaggatgatgtttggagactggaaaagattg 313 ||||||||||||| ||||||||||| || |||||||||||||||||| |||| ||||||| Sbjct: 52585 tgtacaagaaacactaccctcctgccctaaaggatgatgtttggagattggagaagattg 52644 Query: 314 gaaaggacggtgcattccacgggaaactaaactcaaacggaatctatacagttgaacatt 373 ||||||| |||||||| ||| ||| ||||||||||| ||||| || ||||||||||||| Sbjct: 52645 gaaaggatggtgcatttcacaagaagctaaactcaaatggaatatacacagttgaacatt 52704 Query: 374 ttcttcaacttcttgttaaagatcaacagaagttaagaa 412 |||||||||||||||||| ||||||||||||| |||||| Sbjct: 52705 ttcttcaacttcttgttagagatcaacagaagctaagaa 52743 Score = 113 bits (57), Expect = 6e-22 Identities = 75/81 (92%) Strand = Plus / Plus Query: 429 catgtcaaataagatgtgggaaagtcttgttgaacatgcaaaaacttgtgttctgagtgg 488 ||||||||||||||||||||||||||||||||| ||||| || || |||||| ||||||| Sbjct: 52849 catgtcaaataagatgtgggaaagtcttgttgagcatgcgaagacatgtgttttgagtgg 52908 Query: 489 caaacattatatatattactc 509 |||||| |||||||||||||| Sbjct: 52909 caaacactatatatattactc 52929
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 139 bits (70), Expect = 1e-29 Identities = 190/230 (82%) Strand = Plus / Plus Query: 24 cattgtgaaagaacgtgaagggaagaggcctcttttaaacggtgatatccatgtgacact 83 |||||| || || |||||||||||||| |||||||| | ||||| | || ||||| || Sbjct: 21341544 cattgtcaaggagcgtgaagggaagagacctcttttgacaggtgaccttcaggtgaccct 21341603 Query: 84 taaagaaggcgtagggaccataggagagcttatcttcactgacaattccagctggataag 143 ||||||||| || || |||||||| |||||||| |||||||| || |||||||||||||| Sbjct: 21341604 taaagaaggtgttggaaccataggggagcttattttcactgataactccagctggataag 21341663 Query: 144 gagcagaaaattcagacttgggatgagagtctcttcaggattttgtgacggaattcgtat 203 |||||||||||||| |||||| |||| || | |||| | || ||| || |||||| | Sbjct: 21341664 aagcagaaaattcaggcttgggctgagggttgccccagggtcttttgaaggtattcgtgt 21341723 Query: 204 caaagaggcgaagacagaggcttttactgtgaaagatcacagaggagaat 253 | |||||||||||||| ||||||||||| || ||||||||||| |||| Sbjct: 21341724 tagggaggcgaagacagaagcttttactgttaaggatcacagaggggaat 21341773 Score = 85.7 bits (43), Expect = 1e-13 Identities = 112/135 (82%) Strand = Plus / Plus Query: 274 cctgcgcttaaggatgatgtttggagactggaaaagattggaaaggacggtgcattccac 333 ||||| || |||||||||||||||||| | ||||||||||| ||||| |||||||||||| Sbjct: 21341881 cctgccctaaaggatgatgtttggagattagaaaagattggcaaggatggtgcattccac 21341940 Query: 334 gggaaactaaactcaaacggaatctatacagttgaacattttcttcaacttcttgttaaa 393 ||| |||| ||| || || |||||||||||| ||||||| || |||||||| || Sbjct: 21341941 aagaagttaaatgcaagtgggatttatacagttgaagattttctccagcttcttgtcaag 21342000 Query: 394 gatcaacagaagtta 408 ||||| |||| |||| Sbjct: 21342001 gatcagcagaggtta 21342015 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 430 atgtcaaataagatgtgggaaagtcttgttgaacatgcaaaaacttgtgt 479 ||||||||||||||||||||||| |||||||| |||||||| |||||||| Sbjct: 21342115 atgtcaaataagatgtgggaaagccttgttgagcatgcaaagacttgtgt 21342164 Score = 71.9 bits (36), Expect = 2e-09 Identities = 78/92 (84%) Strand = Plus / Minus Query: 415 atccttggtactggcatgtcaaataagatgtgggaaagtcttgttgaacatgcaaaaact 474 |||||||| | ||| ||||| |||||||||||||| | |||||| ||||||||||| ||| Sbjct: 4296348 atccttggaagtggtatgtctaataagatgtgggatattcttgtcgaacatgcaaagact 4296289 Query: 475 tgtgttctgagtggcaaacattatatatatta 506 ||||| | ||||| ||| |||| |||||||| Sbjct: 4296288 tgtgtcttaagtggaaaatattacatatatta 4296257 Score = 58.0 bits (29), Expect = 3e-05 Identities = 137/173 (79%) Strand = Plus / Minus Query: 28 gtgaaagaacgtgaagggaagaggcctcttttaaacggtgatatccatgtgacacttaaa 87 |||||||| |||||||| ||| | |||||||||| |||||| | || || ||||| ||| Sbjct: 4296890 gtgaaagagcgtgaaggaaagcgccctcttttaactggtgatgtacaagtcacactaaaa 4296831 Query: 88 gaaggcgtagggaccataggagagcttatcttcactgacaattccagctggataaggagc 147 ||||| || || || |||| ||||||| ||||| || || || |||||||||||||| Sbjct: 4296830 gaaggtgttggcactgtaggggagcttacattcacagataactctagctggataaggagt 4296771 Query: 148 agaaaattcagacttgggatgagagtctcttcaggattttgtgacggaattcg 200 | || ||| ||||||| ||| | | || |||||||||||||| || ||||| Sbjct: 4296770 cggaagttccgacttggtttgaaaatttcctcaggattttgtgagggtattcg 4296718 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ttttactgtgaaagatcaca 244 |||||||||||||||||||| Sbjct: 14173291 ttttactgtgaaagatcaca 14173272
>dbj|AP005883.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0435E12 Length = 143188 Score = 139 bits (70), Expect = 1e-29 Identities = 190/230 (82%) Strand = Plus / Plus Query: 24 cattgtgaaagaacgtgaagggaagaggcctcttttaaacggtgatatccatgtgacact 83 |||||| || || |||||||||||||| |||||||| | ||||| | || ||||| || Sbjct: 124079 cattgtcaaggagcgtgaagggaagagacctcttttgacaggtgaccttcaggtgaccct 124138 Query: 84 taaagaaggcgtagggaccataggagagcttatcttcactgacaattccagctggataag 143 ||||||||| || || |||||||| |||||||| |||||||| || |||||||||||||| Sbjct: 124139 taaagaaggtgttggaaccataggggagcttattttcactgataactccagctggataag 124198 Query: 144 gagcagaaaattcagacttgggatgagagtctcttcaggattttgtgacggaattcgtat 203 |||||||||||||| |||||| |||| || | |||| | || ||| || |||||| | Sbjct: 124199 aagcagaaaattcaggcttgggctgagggttgccccagggtcttttgaaggtattcgtgt 124258 Query: 204 caaagaggcgaagacagaggcttttactgtgaaagatcacagaggagaat 253 | |||||||||||||| ||||||||||| || ||||||||||| |||| Sbjct: 124259 tagggaggcgaagacagaagcttttactgttaaggatcacagaggggaat 124308 Score = 85.7 bits (43), Expect = 1e-13 Identities = 112/135 (82%) Strand = Plus / Plus Query: 274 cctgcgcttaaggatgatgtttggagactggaaaagattggaaaggacggtgcattccac 333 ||||| || |||||||||||||||||| | ||||||||||| ||||| |||||||||||| Sbjct: 124416 cctgccctaaaggatgatgtttggagattagaaaagattggcaaggatggtgcattccac 124475 Query: 334 gggaaactaaactcaaacggaatctatacagttgaacattttcttcaacttcttgttaaa 393 ||| |||| ||| || || |||||||||||| ||||||| || |||||||| || Sbjct: 124476 aagaagttaaatgcaagtgggatttatacagttgaagattttctccagcttcttgtcaag 124535 Query: 394 gatcaacagaagtta 408 ||||| |||| |||| Sbjct: 124536 gatcagcagaggtta 124550 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 430 atgtcaaataagatgtgggaaagtcttgttgaacatgcaaaaacttgtgt 479 ||||||||||||||||||||||| |||||||| |||||||| |||||||| Sbjct: 124650 atgtcaaataagatgtgggaaagccttgttgagcatgcaaagacttgtgt 124699
>dbj|AP004144.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1712_E04 Length = 110098 Score = 139 bits (70), Expect = 1e-29 Identities = 190/230 (82%) Strand = Plus / Plus Query: 24 cattgtgaaagaacgtgaagggaagaggcctcttttaaacggtgatatccatgtgacact 83 |||||| || || |||||||||||||| |||||||| | ||||| | || ||||| || Sbjct: 1497 cattgtcaaggagcgtgaagggaagagacctcttttgacaggtgaccttcaggtgaccct 1556 Query: 84 taaagaaggcgtagggaccataggagagcttatcttcactgacaattccagctggataag 143 ||||||||| || || |||||||| |||||||| |||||||| || |||||||||||||| Sbjct: 1557 taaagaaggtgttggaaccataggggagcttattttcactgataactccagctggataag 1616 Query: 144 gagcagaaaattcagacttgggatgagagtctcttcaggattttgtgacggaattcgtat 203 |||||||||||||| |||||| |||| || | |||| | || ||| || |||||| | Sbjct: 1617 aagcagaaaattcaggcttgggctgagggttgccccagggtcttttgaaggtattcgtgt 1676 Query: 204 caaagaggcgaagacagaggcttttactgtgaaagatcacagaggagaat 253 | |||||||||||||| ||||||||||| || ||||||||||| |||| Sbjct: 1677 tagggaggcgaagacagaagcttttactgttaaggatcacagaggggaat 1726 Score = 85.7 bits (43), Expect = 1e-13 Identities = 112/135 (82%) Strand = Plus / Plus Query: 274 cctgcgcttaaggatgatgtttggagactggaaaagattggaaaggacggtgcattccac 333 ||||| || |||||||||||||||||| | ||||||||||| ||||| |||||||||||| Sbjct: 1834 cctgccctaaaggatgatgtttggagattagaaaagattggcaaggatggtgcattccac 1893 Query: 334 gggaaactaaactcaaacggaatctatacagttgaacattttcttcaacttcttgttaaa 393 ||| |||| ||| || || |||||||||||| ||||||| || |||||||| || Sbjct: 1894 aagaagttaaatgcaagtgggatttatacagttgaagattttctccagcttcttgtcaag 1953 Query: 394 gatcaacagaagtta 408 ||||| |||| |||| Sbjct: 1954 gatcagcagaggtta 1968 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 430 atgtcaaataagatgtgggaaagtcttgttgaacatgcaaaaacttgtgt 479 ||||||||||||||||||||||| |||||||| |||||||| |||||||| Sbjct: 2068 atgtcaaataagatgtgggaaagccttgttgagcatgcaaagacttgtgt 2117
>gb|BT013618.1| Lycopersicon esculentum clone 132419F, mRNA sequence Length = 2379 Score = 123 bits (62), Expect = 6e-25 Identities = 173/210 (82%) Strand = Plus / Plus Query: 124 gacaattccagctggataaggagcagaaaattcagacttgggatgagagtctcttcagga 183 |||||||| || |||||||||||||| || ||||||||||| |||| ||| |||| ||| Sbjct: 716 gacaattcaagttggataaggagcaggaagttcagacttggcatgaaagttgcttctgga 775 Query: 184 ttttgtgacggaattcgtatcaaagaggcgaagacagaggcttttactgtgaaagatcac 243 | |||||| ||| | || || ||| || ||||| |||||||| ||||| ||||||||| Sbjct: 776 tattgtgaaggagtacgcatacgagaagccaagactgaggctttcactgttaaagatcac 835 Query: 244 agaggagaattgtacaagaaacattaccctcctgcgcttaaggatgatgtttggagactg 303 | ||||||||||||||||||||||| || || || || || |||||||| |||||| || Sbjct: 836 cgtggagaattgtacaagaaacattatccaccagctctaaatgatgatgtctggagattg 895 Query: 304 gaaaagattggaaaggacggtgcattccac 333 || |||||||| ||||| ||| | |||||| Sbjct: 896 gagaagattggcaaggatggttctttccac 925 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 407 taagaagtatccttggtactggcatgtcaaataagatgtggga 449 |||||||||||||||| | ||| |||||||||||||||||||| Sbjct: 999 taagaagtatccttggaagtggtatgtcaaataagatgtggga 1041
>gb|U58971.1|NTU58971 Nicotiana tabacum calmodulin-binding protein (TCB60) mRNA, complete cds Length = 2409 Score = 101 bits (51), Expect = 2e-18 Identities = 168/207 (81%) Strand = Plus / Plus Query: 127 aattccagctggataaggagcagaaaattcagacttgggatgagagtctcttcaggattt 186 ||||| || |||||||||||||| |||||||||||||| |||| ||| |||| |||| | Sbjct: 705 aattcaagttggataaggagcaggaaattcagacttggcatgaaagttgcttctggatat 764 Query: 187 tgtgacggaattcgtatcaaagaggcgaagacagaggcttttactgtgaaagatcacaga 246 ||||| || | || || ||| || ||||| |||||||| ||||| |||||||| | Sbjct: 765 tgtgaaggcgtacgcatacgagaagcaaagactgaggctttcactgttgaagatcaccgt 824 Query: 247 ggagaattgtacaagaaacattaccctcctgcgcttaaggatgatgtttggagactggaa 306 ||||||||||||||||||||||| || || || || || || ||||| |||||| |||| Sbjct: 825 ggagaattgtacaagaaacattatccaccagctctaaatgacgatgtctggagattggag 884 Query: 307 aagattggaaaggacggtgcattccac 333 |||||||| ||||| ||| | |||||| Sbjct: 885 aagattggcaaggatggttctttccac 911 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 atgtcaaataagatgtggga 449 |||||||||||||||||||| Sbjct: 1008 atgtcaaataagatgtggga 1027
>gb|BT012986.1| Lycopersicon esculentum clone 114203R, mRNA sequence Length = 2153 Score = 85.7 bits (43), Expect = 1e-13 Identities = 76/87 (87%) Strand = Plus / Plus Query: 231 tgtgaaagatcacagaggagaattgtacaagaaacattaccctcctgcgcttaaggatga 290 |||||| ||||| ||||||||||||||||||||||||| || ||||| | || ||||| Sbjct: 699 tgtgaaggatcatcgaggagaattgtacaagaaacattatccacctgcattaaacgatga 758 Query: 291 tgtttggagactggaaaagattggaaa 317 |||||||||| |||||||||| ||||| Sbjct: 759 tgtttggagattggaaaagataggaaa 785 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 atgtcaaataagatgtggga 449 |||||||||||||||||||| Sbjct: 898 atgtcaaataagatgtggga 917
>ref|NM_001036295.1| Arabidopsis thaliana calmodulin binding AT2G18750 transcript variant AT2G18750.2 mRNA, complete cds Length = 2326 Score = 81.8 bits (41), Expect = 2e-12 Identities = 239/305 (78%) Strand = Plus / Plus Query: 28 gtgaaagaacgtgaagggaagaggcctcttttaaacggtgatatccatgtgacacttaaa 87 |||||||||||| |||||||||||||||| || | |||||| | || || || | ||| Sbjct: 719 gtgaaagaacgtcaagggaagaggcctctcttgactggtgatgtgcaggtcacgttgaaa 778 Query: 88 gaaggcgtagggaccataggagagcttatcttcactgacaattccagctggataaggagc 147 ||||| || || || |||| || |||||||| || ||||| || || ||||| || || Sbjct: 779 gaaggtgtgggaacattaggggaacttatctttacggacaactcaagttggattagatgc 838 Query: 148 agaaaattcagacttgggatgagagtctcttcaggattttgtgacggaattcgtatcaaa 207 ||||||||||| || || | || |||||||| || | ||||| ||||| ||| | Sbjct: 839 agaaaattcaggctgggtttaagggtctcttcgggttactgtgagggaatgcgtgtacgc 898 Query: 208 gaggcgaagacagaggcttttactgtgaaagatcacagaggagaattgtacaagaaacat 267 ||||| || ||||| |||||||| ||||| || || | ||||| ||||||||||||||| Sbjct: 899 gaggcaaaaacagaagcttttaccgtgaaggaccatcgtggagagttgtacaagaaacat 958 Query: 268 taccctcctgcgcttaaggatgatgtttggagactggaaaagattggaaaggacggtgca 327 ||||| ||||| | | ||||| || ||||| |||||||||||||||||||||| || Sbjct: 959 tacccacctgctttggatgatgaggtctggaggttggaaaagattggaaaggacggggct 1018 Query: 328 ttcca 332 ||||| Sbjct: 1019 ttcca 1023
>ref|NM_127431.2| Arabidopsis thaliana calmodulin binding AT2G18750 transcript variant AT2G18750.1 mRNA, complete cds Length = 2228 Score = 81.8 bits (41), Expect = 2e-12 Identities = 239/305 (78%) Strand = Plus / Plus Query: 28 gtgaaagaacgtgaagggaagaggcctcttttaaacggtgatatccatgtgacacttaaa 87 |||||||||||| |||||||||||||||| || | |||||| | || || || | ||| Sbjct: 622 gtgaaagaacgtcaagggaagaggcctctcttgactggtgatgtgcaggtcacgttgaaa 681 Query: 88 gaaggcgtagggaccataggagagcttatcttcactgacaattccagctggataaggagc 147 ||||| || || || |||| || |||||||| || ||||| || || ||||| || || Sbjct: 682 gaaggtgtgggaacattaggggaacttatctttacggacaactcaagttggattagatgc 741 Query: 148 agaaaattcagacttgggatgagagtctcttcaggattttgtgacggaattcgtatcaaa 207 ||||||||||| || || | || |||||||| || | ||||| ||||| ||| | Sbjct: 742 agaaaattcaggctgggtttaagggtctcttcgggttactgtgagggaatgcgtgtacgc 801 Query: 208 gaggcgaagacagaggcttttactgtgaaagatcacagaggagaattgtacaagaaacat 267 ||||| || ||||| |||||||| ||||| || || | ||||| ||||||||||||||| Sbjct: 802 gaggcaaaaacagaagcttttaccgtgaaggaccatcgtggagagttgtacaagaaacat 861 Query: 268 taccctcctgcgcttaaggatgatgtttggagactggaaaagattggaaaggacggtgca 327 ||||| ||||| | | ||||| || ||||| |||||||||||||||||||||| || Sbjct: 862 tacccacctgctttggatgatgaggtctggaggttggaaaagattggaaaggacggggct 921 Query: 328 ttcca 332 ||||| Sbjct: 922 ttcca 926
>gb|AF424622.1|AF424622 Arabidopsis thaliana At2g18750/MSF3.13 mRNA, complete cds Length = 2346 Score = 81.8 bits (41), Expect = 2e-12 Identities = 239/305 (78%) Strand = Plus / Plus Query: 28 gtgaaagaacgtgaagggaagaggcctcttttaaacggtgatatccatgtgacacttaaa 87 |||||||||||| |||||||||||||||| || | |||||| | || || || | ||| Sbjct: 703 gtgaaagaacgtcaagggaagaggcctctcttgactggtgatgtgcaggtcacgttgaaa 762 Query: 88 gaaggcgtagggaccataggagagcttatcttcactgacaattccagctggataaggagc 147 ||||| || || || |||| || |||||||| || ||||| || || ||||| || || Sbjct: 763 gaaggtgtgggaacattaggggaacttatctttacggacaactcaagttggattagatgc 822 Query: 148 agaaaattcagacttgggatgagagtctcttcaggattttgtgacggaattcgtatcaaa 207 ||||||||||| || || | || |||||||| || | ||||| ||||| ||| | Sbjct: 823 agaaaattcaggctgggtttaagggtctcttcgggttactgtgagggaatgcgtgtacgc 882 Query: 208 gaggcgaagacagaggcttttactgtgaaagatcacagaggagaattgtacaagaaacat 267 ||||| || ||||| |||||||| ||||| || || | ||||| ||||||||||||||| Sbjct: 883 gaggcaaaaacagaagcttttaccgtgaaggaccatcgtggagagttgtacaagaaacat 942 Query: 268 taccctcctgcgcttaaggatgatgtttggagactggaaaagattggaaaggacggtgca 327 ||||| ||||| | | ||||| || ||||| |||||||||||||||||||||| || Sbjct: 943 tacccacctgctttggatgatgaggtctggaggttggaaaagattggaaaggacggggct 1002 Query: 328 ttcca 332 ||||| Sbjct: 1003 ttcca 1007
>dbj|AK101699.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033060E07, full insert sequence Length = 2275 Score = 77.8 bits (39), Expect = 3e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 412 agtatccttggtactggcatgtcaaataagatgtgggaaagtcttgttgaacatgcaaaa 471 ||||||||||| | ||| ||||| |||||||||||||| | |||||| ||||||||||| Sbjct: 993 agtatccttggaagtggtatgtctaataagatgtgggatattcttgtcgaacatgcaaag 1052 Query: 472 acttgtgttctgagtggcaaacattatatatatta 506 |||||||| | ||||| ||| |||| |||||||| Sbjct: 1053 acttgtgtcttaagtggaaaatattacatatatta 1087 Score = 73.8 bits (37), Expect = 5e-10 Identities = 229/293 (78%) Strand = Plus / Plus Query: 28 gtgaaagaacgtgaagggaagaggcctcttttaaacggtgatatccatgtgacacttaaa 87 |||||||| |||||||| ||| | |||||||||| |||||| | || || ||||| ||| Sbjct: 609 gtgaaagagcgtgaaggaaagcgccctcttttaactggtgatgtacaagtcacactaaaa 668 Query: 88 gaaggcgtagggaccataggagagcttatcttcactgacaattccagctggataaggagc 147 ||||| || || || |||| ||||||| ||||| || || || |||||||||||||| Sbjct: 669 gaaggtgttggcactgtaggggagcttacattcacagataactctagctggataaggagt 728 Query: 148 agaaaattcagacttgggatgagagtctcttcaggattttgtgacggaattcgtatcaaa 207 | || ||| ||||||| ||| | | || |||||||||||||| || ||||| ||| Sbjct: 729 cggaagttccgacttggtttgaaaatttcctcaggattttgtgagggtattcgcatccgc 788 Query: 208 gaggcgaagacagaggcttttactgtgaaagatcacagaggagaattgtacaagaaacat 267 ||||| || || || ||||| | || || || ||||||||||||||||| ||||| || Sbjct: 789 gaggcaaaaactgaagctttcatggttaaggaccacagaggagaattgtataagaagcac 848 Query: 268 taccctcctgcgcttaaggatgatgtttggagactggaaaagattggaaagga 320 ||||| |||||| | || ||||| || ||||| | |||||||| || ||||| Sbjct: 849 tacccacctgcgttgaaagatgaggtctggaggttagaaaagatagggaagga 901
>dbj|AK065684.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013042G07, full insert sequence Length = 1379 Score = 77.8 bits (39), Expect = 3e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 412 agtatccttggtactggcatgtcaaataagatgtgggaaagtcttgttgaacatgcaaaa 471 ||||||||||| | ||| ||||| |||||||||||||| | |||||| ||||||||||| Sbjct: 996 agtatccttggaagtggtatgtctaataagatgtgggatattcttgtcgaacatgcaaag 1055 Query: 472 acttgtgttctgagtggcaaacattatatatatta 506 |||||||| | ||||| ||| |||| |||||||| Sbjct: 1056 acttgtgtcttaagtggaaaatattacatatatta 1090 Score = 73.8 bits (37), Expect = 5e-10 Identities = 229/293 (78%) Strand = Plus / Plus Query: 28 gtgaaagaacgtgaagggaagaggcctcttttaaacggtgatatccatgtgacacttaaa 87 |||||||| |||||||| ||| | |||||||||| |||||| | || || ||||| ||| Sbjct: 612 gtgaaagagcgtgaaggaaagcgccctcttttaactggtgatgtacaagtcacactaaaa 671 Query: 88 gaaggcgtagggaccataggagagcttatcttcactgacaattccagctggataaggagc 147 ||||| || || || |||| ||||||| ||||| || || || |||||||||||||| Sbjct: 672 gaaggtgttggcactgtaggggagcttacattcacagataactctagctggataaggagt 731 Query: 148 agaaaattcagacttgggatgagagtctcttcaggattttgtgacggaattcgtatcaaa 207 | || ||| ||||||| ||| | | || |||||||||||||| || ||||| ||| Sbjct: 732 cggaagttccgacttggtttgaaaatttcctcaggattttgtgagggtattcgcatccgc 791 Query: 208 gaggcgaagacagaggcttttactgtgaaagatcacagaggagaattgtacaagaaacat 267 ||||| || || || ||||| | || || || ||||||||||||||||| ||||| || Sbjct: 792 gaggcaaaaactgaagctttcatggttaaggaccacagaggagaattgtataagaagcac 851 Query: 268 taccctcctgcgcttaaggatgatgtttggagactggaaaagattggaaagga 320 ||||| |||||| | || ||||| || ||||| | |||||||| || ||||| Sbjct: 852 tacccacctgcgttgaaagatgaggtctggaggttagaaaagatagggaagga 904
>ref|NM_125139.2| Arabidopsis thaliana calmodulin binding AT5G57580 mRNA, complete cds Length = 2434 Score = 73.8 bits (37), Expect = 5e-10 Identities = 103/125 (82%) Strand = Plus / Plus Query: 208 gaggcgaagacagaggcttttactgtgaaagatcacagaggagaattgtacaagaaacat 267 ||||| ||||| || |||||| ||| || |||||||| || |||||||||||||| ||| Sbjct: 900 gaggccaagacggaagcttttgttgttaaggatcacaggggcgaattgtacaagaagcat 959 Query: 268 taccctcctgcgcttaaggatgatgtttggagactggaaaagattggaaaggacggtgca 327 || || ||||| || || |||||||| |||||| |||| ||||| || ||||| || ||| Sbjct: 960 tatccacctgctctgaatgatgatgtgtggagattggacaagatcggcaaggatggggca 1019 Query: 328 ttcca 332 ||||| Sbjct: 1020 ttcca 1024
>gb|AY091434.1| Arabidopsis thaliana putative calmodulin-binding protein (At5g57580) mRNA, complete cds Length = 1975 Score = 73.8 bits (37), Expect = 5e-10 Identities = 103/125 (82%) Strand = Plus / Plus Query: 208 gaggcgaagacagaggcttttactgtgaaagatcacagaggagaattgtacaagaaacat 267 ||||| ||||| || |||||| ||| || |||||||| || |||||||||||||| ||| Sbjct: 688 gaggccaagacggaagcttttgttgttaaggatcacaggggcgaattgtacaagaagcat 747 Query: 268 taccctcctgcgcttaaggatgatgtttggagactggaaaagattggaaaggacggtgca 327 || || ||||| || || |||||||| |||||| |||| ||||| || ||||| || ||| Sbjct: 748 tatccacctgctctgaatgatgatgtgtggagattggacaagatcggcaaggatggggca 807 Query: 328 ttcca 332 ||||| Sbjct: 808 ttcca 812
>gb|AY056289.1| Arabidopsis thaliana putative calmodulin-binding protein (At5g57580) mRNA, complete cds Length = 2404 Score = 73.8 bits (37), Expect = 5e-10 Identities = 103/125 (82%) Strand = Plus / Plus Query: 208 gaggcgaagacagaggcttttactgtgaaagatcacagaggagaattgtacaagaaacat 267 ||||| ||||| || |||||| ||| || |||||||| || |||||||||||||| ||| Sbjct: 900 gaggccaagacggaagcttttgttgttaaggatcacaggggcgaattgtacaagaagcat 959 Query: 268 taccctcctgcgcttaaggatgatgtttggagactggaaaagattggaaaggacggtgca 327 || || ||||| || || |||||||| |||||| |||| ||||| || ||||| || ||| Sbjct: 960 tatccacctgctctgaatgatgatgtgtggagattggacaagatcggcaaggatggggca 1019 Query: 328 ttcca 332 ||||| Sbjct: 1020 ttcca 1024
>gb|BT013490.1| Lycopersicon esculentum clone 132174R, mRNA sequence Length = 2475 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 208 gaggcgaagacagaggcttttactgtgaaagatcacagaggagaattgtacaagaaacat 267 ||||| || ||||| || || ||||| || ||||| |||||||||||||||||||||||| Sbjct: 808 gaggcaaaaacagatgccttcactgtcaaggatcatagaggagaattgtacaagaaacat 867 Query: 268 taccctcctgcgcttaaggatgatgtttggagactggaaaagat 311 || || ||||| | | ||||| ||||||||| |||||||||| Sbjct: 868 tatccacctgcattagatgatgaagtttggagattggaaaagat 911 Score = 44.1 bits (22), Expect = 0.46 Identities = 34/38 (89%) Strand = Plus / Plus Query: 121 actgacaattccagctggataaggagcagaaaattcag 158 |||||||| ||||||||||| || |||||||| ||||| Sbjct: 721 actgacaactccagctggatcagaagcagaaagttcag 758
>dbj|AP004838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0504A05 Length = 148360 Score = 71.9 bits (36), Expect = 2e-09 Identities = 78/92 (84%) Strand = Plus / Minus Query: 415 atccttggtactggcatgtcaaataagatgtgggaaagtcttgttgaacatgcaaaaact 474 |||||||| | ||| ||||| |||||||||||||| | |||||| ||||||||||| ||| Sbjct: 113162 atccttggaagtggtatgtctaataagatgtgggatattcttgtcgaacatgcaaagact 113103 Query: 475 tgtgttctgagtggcaaacattatatatatta 506 ||||| | ||||| ||| |||| |||||||| Sbjct: 113102 tgtgtcttaagtggaaaatattacatatatta 113071 Score = 58.0 bits (29), Expect = 3e-05 Identities = 137/173 (79%) Strand = Plus / Minus Query: 28 gtgaaagaacgtgaagggaagaggcctcttttaaacggtgatatccatgtgacacttaaa 87 |||||||| |||||||| ||| | |||||||||| |||||| | || || ||||| ||| Sbjct: 113704 gtgaaagagcgtgaaggaaagcgccctcttttaactggtgatgtacaagtcacactaaaa 113645 Query: 88 gaaggcgtagggaccataggagagcttatcttcactgacaattccagctggataaggagc 147 ||||| || || || |||| ||||||| ||||| || || || |||||||||||||| Sbjct: 113644 gaaggtgttggcactgtaggggagcttacattcacagataactctagctggataaggagt 113585 Query: 148 agaaaattcagacttgggatgagagtctcttcaggattttgtgacggaattcg 200 | || ||| ||||||| ||| | | || |||||||||||||| || ||||| Sbjct: 113584 cggaagttccgacttggtttgaaaatttcctcaggattttgtgagggtattcg 113532
>gb|AF411808.1| Lycopersicon esculentum BAC clone Clemson_Id 62O11, complete sequence Length = 70347 Score = 67.9 bits (34), Expect = 3e-08 Identities = 106/130 (81%) Strand = Plus / Plus Query: 124 gacaattccagctggataaggagcagaaaattcagacttgggatgagagtctcttcagga 183 |||||||| || |||||||||||||| || ||||||||||| |||| ||| |||| ||| Sbjct: 36331 gacaattcaagttggataaggagcaggaagttcagacttggcatgaaagttgcttctgga 36390 Query: 184 ttttgtgacggaattcgtatcaaagaggcgaagacagaggcttttactgtgaaagatcac 243 | |||||| ||| | || || ||| || ||||| |||||||| ||||| ||||||||| Sbjct: 36391 tattgtgaaggagtacgcatacgagaagccaagactgaggctttcactgttaaagatcac 36450 Query: 244 agaggagaat 253 | ||||||| Sbjct: 36451 cgtggagaat 36460 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 254 tgtacaagaaacattaccctcctgcgcttaaggatgatgtttggagactggaaaagattg 313 |||||||||||||||| || || || || || |||||||| |||||| |||| ||||||| Sbjct: 36545 tgtacaagaaacattatccaccagctctaaatgatgatgtctggagattggagaagattg 36604 Query: 314 gaaaggacggtgcattccac 333 | ||||| ||| | |||||| Sbjct: 36605 gcaaggatggttctttccac 36624 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 415 atccttggtactggcatgtcaaataagatgtggga 449 |||||||| | ||| |||||||||||||||||||| Sbjct: 36809 atccttggaagtggtatgtcaaataagatgtggga 36843
>gb|AC087773.1|AC087773 Genomic Sequence For Lycopersicon esculentum Clone T62O11, complete sequence Length = 70497 Score = 67.9 bits (34), Expect = 3e-08 Identities = 106/130 (81%) Strand = Plus / Plus Query: 124 gacaattccagctggataaggagcagaaaattcagacttgggatgagagtctcttcagga 183 |||||||| || |||||||||||||| || ||||||||||| |||| ||| |||| ||| Sbjct: 36331 gacaattcaagttggataaggagcaggaagttcagacttggcatgaaagttgcttctgga 36390 Query: 184 ttttgtgacggaattcgtatcaaagaggcgaagacagaggcttttactgtgaaagatcac 243 | |||||| ||| | || || ||| || ||||| |||||||| ||||| ||||||||| Sbjct: 36391 tattgtgaaggagtacgcatacgagaagccaagactgaggctttcactgttaaagatcac 36450 Query: 244 agaggagaat 253 | ||||||| Sbjct: 36451 cgtggagaat 36460 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 254 tgtacaagaaacattaccctcctgcgcttaaggatgatgtttggagactggaaaagattg 313 |||||||||||||||| || || || || || |||||||| |||||| |||| ||||||| Sbjct: 36545 tgtacaagaaacattatccaccagctctaaatgatgatgtctggagattggagaagattg 36604 Query: 314 gaaaggacggtgcattccac 333 | ||||| ||| | |||||| Sbjct: 36605 gcaaggatggttctttccac 36624 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 415 atccttggtactggcatgtcaaataagatgtggga 449 |||||||| | ||| |||||||||||||||||||| Sbjct: 36809 atccttggaagtggtatgtcaaataagatgtggga 36843
>dbj|AK104737.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-D04, full insert sequence Length = 1297 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 434 caaataagatgtgggaaagtcttgttgaacatgcaaaaacttgtgt 479 ||||||||||||||||||| |||||||| |||||||| |||||||| Sbjct: 1 caaataagatgtgggaaagccttgttgagcatgcaaagacttgtgt 46
>dbj|AK061441.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-C04, full insert sequence Length = 1297 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 434 caaataagatgtgggaaagtcttgttgaacatgcaaaaacttgtgt 479 ||||||||||||||||||| |||||||| |||||||| |||||||| Sbjct: 1 caaataagatgtgggaaagccttgttgagcatgcaaagacttgtgt 46
>ref|NM_119250.2| Arabidopsis thaliana calmodulin binding AT4G31000 mRNA, complete cds Length = 2112 Score = 63.9 bits (32), Expect = 5e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 73 catgtgacacttaaagaaggcgtagggaccataggagagcttatcttcactgacaattcc 132 ||||||| | |||||||||| ||||| || | ||| | |||| |||||||||||||| Sbjct: 793 catgtgataattaaagaaggtgtaggaactcttggaaaacttactttcactgacaattcg 852 Query: 133 agctggataaggagcagaaaattcagacttgg 164 |||||||| ||||||||||| || |||||||| Sbjct: 853 agctggattaggagcagaaagtttagacttgg 884 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 230 ctgtgaaagatcacagaggagaattgtacaagaaacatta 269 |||| |||||||||||||||||| | |||||||||||||| Sbjct: 938 ctgttaaagatcacagaggagaactatacaagaaacatta 977
>gb|AY074504.1| Arabidopsis thaliana At4g31000 mRNA sequence Length = 2463 Score = 63.9 bits (32), Expect = 5e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 73 catgtgacacttaaagaaggcgtagggaccataggagagcttatcttcactgacaattcc 132 ||||||| | |||||||||| ||||| || | ||| | |||| |||||||||||||| Sbjct: 1103 catgtgataattaaagaaggtgtaggaactcttggaaaacttactttcactgacaattcg 1162 Query: 133 agctggataaggagcagaaaattcagacttgg 164 |||||||| ||||||||||| || |||||||| Sbjct: 1163 agctggattaggagcagaaagtttagacttgg 1194
>emb|AL161578.2|ATCHRIV74 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 74 Length = 194920 Score = 63.9 bits (32), Expect = 5e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 73 catgtgacacttaaagaaggcgtagggaccataggagagcttatcttcactgacaattcc 132 ||||||| | |||||||||| ||||| || | ||| | |||| |||||||||||||| Sbjct: 60215 catgtgataattaaagaaggtgtaggaactcttggaaaacttactttcactgacaattcg 60274 Query: 133 agctggataaggagcagaaaattcagacttgg 164 |||||||| ||||||||||| || |||||||| Sbjct: 60275 agctggattaggagcagaaagtttagacttgg 60306
>emb|AL022198.1|ATF6I18 Arabidopsis thaliana DNA chromosome 4, BAC clone F6I18 (ESSA project) Length = 122322 Score = 63.9 bits (32), Expect = 5e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 73 catgtgacacttaaagaaggcgtagggaccataggagagcttatcttcactgacaattcc 132 ||||||| | |||||||||| ||||| || | ||| | |||| |||||||||||||| Sbjct: 17756 catgtgataattaaagaaggtgtaggaactcttggaaaacttactttcactgacaattcg 17697 Query: 133 agctggataaggagcagaaaattcagacttgg 164 |||||||| ||||||||||| || |||||||| Sbjct: 17696 agctggattaggagcagaaagtttagacttgg 17665
>gb|AY062856.1| Arabidopsis thaliana putative calmodulin-binding protein (At4g31000; F6I18.90) mRNA, complete cds Length = 2217 Score = 63.9 bits (32), Expect = 5e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 73 catgtgacacttaaagaaggcgtagggaccataggagagcttatcttcactgacaattcc 132 ||||||| | |||||||||| ||||| || | ||| | |||| |||||||||||||| Sbjct: 793 catgtgataattaaagaaggtgtaggaactcttggaaaacttactttcactgacaattcg 852 Query: 133 agctggataaggagcagaaaattcagacttgg 164 |||||||| ||||||||||| || |||||||| Sbjct: 853 agctggattaggagcagaaagtttagacttgg 884
>gb|AC005724.3| Arabidopsis thaliana chromosome 2 clone MSF3 map CIC06E08, complete sequence Length = 88413 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 254 tgtacaagaaacattaccctcctgcgcttaaggatgatgtttggagactggaaaagattg 313 ||||||||||||||||||| ||||| | | ||||| || ||||| |||||||||||| Sbjct: 46850 tgtacaagaaacattacccacctgctttggatgatgaggtctggaggttggaaaagattg 46909 Query: 314 gaaaggacggtgcattcca 332 |||||||||| || ||||| Sbjct: 46910 gaaaggacggggctttcca 46928 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 28 gtgaaagaacgtgaagggaagaggcctct 56 |||||||||||| |||||||||||||||| Sbjct: 46539 gtgaaagaacgtcaagggaagaggcctct 46567
>gb|AY107282.1| Zea mays PCO084119 mRNA sequence Length = 798 Score = 61.9 bits (31), Expect = 2e-06 Identities = 112/139 (80%) Strand = Plus / Plus Query: 26 ttgtgaaagaacgtgaagggaagaggcctcttttaaacggtgatatccatgtgacactta 85 ||||||| || ||||| || ||| ||||| |||||| |||||| | || || ||||| | Sbjct: 398 ttgtgaaggagcgtgagggaaagcggcctattttaactggtgatctacaagtcacactaa 457 Query: 86 aagaaggcgtagggaccataggagagcttatcttcactgacaattccagctggataagga 145 ||||||| || ||||| | || ||||||| ||||| || || || ||||||||||||| Sbjct: 458 aagaaggtgtggggacagttggggagcttacattcacagataactctagctggataagga 517 Query: 146 gcagaaaattcagacttgg 164 | || |||||||||||||| Sbjct: 518 gtaggaaattcagacttgg 536
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 118 ttcactgacaattccagctggataaggagcagaaaattcagacttgg 164 ||||| ||||| || ||||||||||||||||| || ||||||||||| Sbjct: 10591079 ttcacggacaactctagctggataaggagcaggaagttcagacttgg 10591125
>gb|AC137267.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032G21, from chromosome 3, complete sequence Length = 187621 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 118 ttcactgacaattccagctggataaggagcagaaaattcagacttgg 164 ||||| ||||| || ||||||||||||||||| || ||||||||||| Sbjct: 7993 ttcacggacaactctagctggataaggagcaggaagttcagacttgg 8039
>gb|AC118668.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0036G02, from chromosome 3, complete sequence Length = 153308 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 118 ttcactgacaattccagctggataaggagcagaaaattcagacttgg 164 ||||| ||||| || ||||||||||||||||| || ||||||||||| Sbjct: 146892 ttcacggacaactctagctggataaggagcaggaagttcagacttgg 146938
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 118 ttcactgacaattccagctggataaggagcagaaaattcagacttgg 164 ||||| ||||| || ||||||||||||||||| || ||||||||||| Sbjct: 10589180 ttcacggacaactctagctggataaggagcaggaagttcagacttgg 10589226
>ref|NM_118712.3| Arabidopsis thaliana calmodulin binding AT4G25800 mRNA, complete cds Length = 2035 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 217 acagaggcttttactgtgaaagatcacagaggagaattgtacaagaaacattaccctcct 276 ||||| ||||| |||| ||||||||||| || |||||||||||||| ||||| || ||| Sbjct: 754 acagaagctttctctgttaaagatcacaggggcgaattgtacaagaagcattatccacct 813 Query: 277 gc 278 || Sbjct: 814 gc 815 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Plus Query: 426 tggcatgtcaaataagatgtggga 449 |||||||||||||||||||||||| Sbjct: 963 tggcatgtcaaataagatgtggga 986
>ref|NM_201798.1| Arabidopsis thaliana calmodulin binding AT2G24300 transcript variant AT2G24300.2 mRNA, complete cds Length = 2084 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 224 cttttactgtgaaagatcacagaggagaattgtacaagaaacatta 269 ||||| |||| |||||||| ||||||||| | |||||||||||||| Sbjct: 694 cttttgctgtcaaagatcatagaggagaactatacaagaaacatta 739
>ref|NM_127992.2| Arabidopsis thaliana calmodulin binding AT2G24300 transcript variant AT2G24300.1 mRNA, complete cds Length = 2213 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 224 cttttactgtgaaagatcacagaggagaattgtacaagaaacatta 269 ||||| |||| |||||||| ||||||||| | |||||||||||||| Sbjct: 823 cttttgctgtcaaagatcatagaggagaactatacaagaaacatta 868
>ref|XM_481946.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1563 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 118 ttcactgacaattccagctggataaggagcagaaaattcaga 159 |||||||||||||| |||||||| |||||||| || |||||| Sbjct: 646 ttcactgacaattcaagctggatcaggagcaggaagttcaga 687 Score = 44.1 bits (22), Expect = 0.46 Identities = 37/42 (88%) Strand = Plus / Plus Query: 235 aaagatcacagaggagaattgtacaagaaacattaccctcct 276 |||||||| |||| |||||||||||||| |||| ||||||| Sbjct: 766 aaagatcatcgaggcgaattgtacaagaagcatttccctcct 807
>gb|BT012547.1| Arabidopsis thaliana At2g24300 gene, complete cds Length = 1512 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 224 cttttactgtgaaagatcacagaggagaattgtacaagaaacatta 269 ||||| |||| |||||||| ||||||||| | |||||||||||||| Sbjct: 401 cttttgctgtcaaagatcatagaggagaactatacaagaaacatta 446
>gb|BT011245.1| Arabidopsis thaliana At2g24300 mRNA, complete cds Length = 1727 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 224 cttttactgtgaaagatcacagaggagaattgtacaagaaacatta 269 ||||| |||| |||||||| ||||||||| | |||||||||||||| Sbjct: 485 cttttgctgtcaaagatcatagaggagaactatacaagaaacatta 530
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 118 ttcactgacaattccagctggataaggagcagaaaattcaga 159 |||||||||||||| |||||||| |||||||| || |||||| Sbjct: 16587636 ttcactgacaattcaagctggatcaggagcaggaagttcaga 16587677
>emb|BX820300.1|CNS0A7YE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH1ZF04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2118 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 224 cttttactgtgaaagatcacagaggagaattgtacaagaaacatta 269 ||||| |||| |||||||| ||||||||| | |||||||||||||| Sbjct: 823 cttttgctgtcaaagatcatagaggagaactatacaagaaacatta 868
>dbj|AP005628.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1014_E02 Length = 159669 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 118 ttcactgacaattccagctggataaggagcagaaaattcaga 159 |||||||||||||| |||||||| |||||||| || |||||| Sbjct: 59460 ttcactgacaattcaagctggatcaggagcaggaagttcaga 59501
>emb|AL161564.2|ATCHRIV64 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 64 Length = 196286 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Plus Query: 426 tggcatgtcaaataagatgtggga 449 |||||||||||||||||||||||| Sbjct: 15027 tggcatgtcaaataagatgtggga 15050
>emb|AL049480.1|ATF14M19 Arabidopsis thaliana DNA chromosome 4, BAC clone F14M19 (ESSA project) Length = 91228 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Plus Query: 426 tggcatgtcaaataagatgtggga 449 |||||||||||||||||||||||| Sbjct: 23948 tggcatgtcaaataagatgtggga 23971
>dbj|AK109582.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-A07, full insert sequence Length = 1644 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 232 gtgaaagatcacagaggagaattgtacaagaaacattaccctcc 275 |||||||||||| | ||||||| ||||||||| |||| |||||| Sbjct: 810 gtgaaagatcaccggggagaatcgtacaagaagcatttccctcc 853
>gb|AC146914.9| Medicago truncatula clone mth2-57l14, complete sequence Length = 122769 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 285 ggatgatgtttggagactggaaaagat 311 |||||| |||||||||||||||||||| Sbjct: 119774 ggatgaagtttggagactggaaaagat 119800
>gb|AC116665.1| Papio hamadryas chromosome , clone RP41-119J13, complete sequence Length = 176602 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 475 tgtgttctgagtggcaaacatt 496 |||||||||||||||||||||| Sbjct: 142788 tgtgttctgagtggcaaacatt 142767
>gb|AC016739.5| Homo sapiens BAC clone RP11-437N19 from 2, complete sequence Length = 90363 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 475 tgtgttctgagtggcaaacatt 496 |||||||||||||||||||||| Sbjct: 79171 tgtgttctgagtggcaaacatt 79192
>gb|AC102224.21| Mus musculus chromosome 3, clone RP24-372D1, complete sequence Length = 196936 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 104 taggagagcttatcttcactga 125 |||||||||||||||||||||| Sbjct: 122889 taggagagcttatcttcactga 122910
>gb|AC153565.5| Mus musculus 10 BAC RP23-228H2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 187589 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 440 agatgtgggaaagtcttgttgaacat 465 |||||||||||||||||||| ||||| Sbjct: 77008 agatgtgggaaagtcttgttcaacat 77033
>gb|AC165278.4| Mus musculus chromosome 15, clone RP23-250O18, complete sequence Length = 187758 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 362 cagttgaacattttcttcaac 382 ||||||||||||||||||||| Sbjct: 13501 cagttgaacattttcttcaac 13481
>ref|XM_389539.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG09363.1) partial mRNA Length = 717 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 ttgtgaaagaacgtgaaggga 46 ||||||||||||||||||||| Sbjct: 399 ttgtgaaagaacgtgaaggga 379
>gb|AC126551.3| Mus musculus BAC clone RP24-505C20 from chromosome 12, complete sequence Length = 151373 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 369 acattttcttcaacttcttgttaaa 393 ||||||||||||||||||| ||||| Sbjct: 109645 acattttcttcaacttctttttaaa 109621
>gb|AC122891.4| Mus musculus BAC clone RP23-66J6 from 12, complete sequence Length = 205784 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 369 acattttcttcaacttcttgttaaa 393 ||||||||||||||||||| ||||| Sbjct: 188338 acattttcttcaacttctttttaaa 188362
>emb|AL035395.1|DMC140G11 Drosophila melanogaster cosmid clone 140G11 Length = 40933 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 484 agtggcaaacattatatatat 504 ||||||||||||||||||||| Sbjct: 28236 agtggcaaacattatatatat 28216
>emb|CR396583.6| Zebrafish DNA sequence from clone DKEY-157G20 in linkage group 5, complete sequence Length = 116605 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 171 agtctcttcaggattttgtga 191 ||||||||||||||||||||| Sbjct: 26330 agtctcttcaggattttgtga 26350
>gb|AC105351.2| Drosophila melanogaster X BAC RP98-34B12 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179795 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 484 agtggcaaacattatatatat 504 ||||||||||||||||||||| Sbjct: 175744 agtggcaaacattatatatat 175764
>gb|AC116543.6| Drosophila melanogaster X BAC RP98-1A14 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 182387 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 484 agtggcaaacattatatatat 504 ||||||||||||||||||||| Sbjct: 42131 agtggcaaacattatatatat 42151
>gb|AE003426.3| Drosophila melanogaster chromosome X, section 10 of 74 of the complete sequence Length = 396604 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 484 agtggcaaacattatatatat 504 ||||||||||||||||||||| Sbjct: 254476 agtggcaaacattatatatat 254456
>emb|AL591913.14| Mouse DNA sequence from clone RP23-120A4 on chromosome 15, complete sequence Length = 196812 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 362 cagttgaacattttcttcaac 382 ||||||||||||||||||||| Sbjct: 107088 cagttgaacattttcttcaac 107108
>emb|AL121805.1|DMBN4L24 Drosophila melanogaster clone BACN4L24 Length = 71813 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 484 agtggcaaacattatatatat 504 ||||||||||||||||||||| Sbjct: 27549 agtggcaaacattatatatat 27529
>gb|AC121879.3| Mus musculus chromosome 19 clone RP24-132B24, complete sequence Length = 134662 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 293 tttggagactggaaaagattggaa 316 ||||||||| |||||||||||||| Sbjct: 54639 tttggagaccggaaaagattggaa 54662
>gb|AC163093.5| Mus musculus chromosome 18, clone RP23-144P22, complete sequence Length = 195116 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 aggatgatgtttggagactg 303 |||||||||||||||||||| Sbjct: 126220 aggatgatgtttggagactg 126201
>gb|AC139553.5| Mus musculus chromosome 19, clone RP24-386E18, complete sequence Length = 168091 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 293 tttggagactggaaaagattggaa 316 ||||||||| |||||||||||||| Sbjct: 146444 tttggagaccggaaaagattggaa 146467
>emb|CT025602.8| Mouse DNA sequence from clone RP23-458L4 on chromosome 14, complete sequence Length = 207863 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 241 cacagaggagaattgtacaagaaa 264 ||||||||||||||||| |||||| Sbjct: 150135 cacagaggagaattgtaaaagaaa 150112
>gb|AC132282.3| Mus musculus BAC clone RP24-348O21 from chromosome 14, complete sequence Length = 166747 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 241 cacagaggagaattgtacaagaaa 264 ||||||||||||||||| |||||| Sbjct: 67493 cacagaggagaattgtaaaagaaa 67470
>emb|AL355382.6| Human DNA sequence from clone RP11-408C8 on chromosome 6, complete sequence Length = 141756 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 486 tggcaaacattatatatatt 505 |||||||||||||||||||| Sbjct: 44791 tggcaaacattatatatatt 44810
>emb|AL121723.36|HSJ854E16 Human DNA sequence from clone RP5-854E16 on chromosome 20 Contains a DKKL1-pending (soggy-1) (SGY-1) pseudogene and part of a CDK5 regulatory subunit associated protein 3 (CDK5RAP3) pseudogene, complete sequence Length = 70452 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 302 tggaaaagattggaaaggac 321 |||||||||||||||||||| Sbjct: 259 tggaaaagattggaaaggac 278
>gb|AC114461.6| Rattus norvegicus 1 BAC CH230-14J24 (Children's Hospital Oakland Research Institute) complete sequence Length = 238852 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 tggtactggcatgtcaaata 439 |||||||||||||||||||| Sbjct: 164196 tggtactggcatgtcaaata 164215
>gb|AC150443.2| Medicago truncatula chromosome 7 BAC clone mth2-71o19, complete sequence Length = 132097 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 365 ttgaacattttcttcaacttcttg 388 |||||||||||||| ||||||||| Sbjct: 105044 ttgaacattttcttgaacttcttg 105021
>dbj|AP004856.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1570_H12 Length = 129767 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ttttactgtgaaagatcaca 244 |||||||||||||||||||| Sbjct: 73311 ttttactgtgaaagatcaca 73292
>emb|BX927240.11| Zebrafish DNA sequence from clone DKEY-16N13 in linkage group 18, complete sequence Length = 263615 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 458 ttgaacatgcaaaaacttgt 477 |||||||||||||||||||| Sbjct: 253574 ttgaacatgcaaaaacttgt 253555
>emb|BX927199.5| Zebrafish DNA sequence from clone CH211-265B3 in linkage group 18, complete sequence Length = 84981 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 458 ttgaacatgcaaaaacttgt 477 |||||||||||||||||||| Sbjct: 10606 ttgaacatgcaaaaacttgt 10587
>gb|AC132436.3| Mus musculus BAC clone RP23-226J18 from 1, complete sequence Length = 248067 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 397 caacagaagttaagaagtat 416 |||||||||||||||||||| Sbjct: 218782 caacagaagttaagaagtat 218801
>gb|M93699.1|SMOEPDSSII Altantic salmon ependymin (SS-II) gene, complete cds Length = 3801 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 tttggagactggaaaagatt 312 |||||||||||||||||||| Sbjct: 3374 tttggagactggaaaagatt 3355 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,742,388 Number of Sequences: 3902068 Number of extensions: 5742388 Number of successful extensions: 110518 Number of sequences better than 10.0: 80 Number of HSP's better than 10.0 without gapping: 82 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 110082 Number of HSP's gapped (non-prelim): 417 length of query: 529 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 506 effective length of database: 17,143,297,704 effective search space: 8674508638224 effective search space used: 8674508638224 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)