| Clone Name | basd19m20 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF079526.1|AF079526 Triticum aestivum secretory protein (WAS-2) mRNA, complete cds Length = 894 Score = 1009 bits (509), Expect = 0.0 Identities = 612/643 (95%), Gaps = 5/643 (0%) Strand = Plus / Plus Query: 1 cttcaggtagccacggtcgcctctttcctcctggtggccttggccgcgacggcccaggca 60 |||||||||||||| |||||||| ||| |||||||||||||||||||| |||||||||| Sbjct: 47 cttcaggtagccacagtcgcctccttcgtcctggtggccttggccgcggcggcccaggcc 106 Query: 61 gtgacgttcgacgcgtcgaacaaggcgtcgggcacctccggcggccggctgttcgagcag 120 ||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||| Sbjct: 107 gtgacgttcgacgcgtcgaacaaggcgtcgggcacctccggcggccggcggttcaaccag 166 Query: 121 gccgtcggcctcccgtactccaagaaggtcctctccgaggcctccgccttcatctggaaa 180 ||||| | |||| |||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 167 gccgtag---tcccatactccaagaaggtcctctctgacgcctccgccttcatctggaaa 223 Query: 181 accttcaaccagcgcgccgtcggcgaccgcaagcctgtcaacgccgtcaccctcgtcgtc 240 ||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||| Sbjct: 224 accttcaaccagcgcgccgtcggcgaccgcaagactgtcgatgccgtcaccctcgtcgtc 283 Query: 241 gaggacatcagcggcgtcgccttcaccagcgccaacggcatccacctcagcgcccagtac 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 284 gaggacatcagcggcgtcgccttcaccagcgccaacggcatccacctcagcgcccagtac 343 Query: 301 gtcgccagcatctccggcgatgtcaagaaggaggtgaccggcgtgctgtaccacgaggcg 360 |||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 344 gtcggcggcatctccggcgacgtcaagaaggaggtgaccggcgtgctgtaccacgaggcg 403 Query: 361 acgcacgtgtggcagtggaacgggc-agggcaaggcgaacggcgggctcatcgaggggat 419 ||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||| Sbjct: 404 acgcacgtgtggcagtggaacggcccagggca-ggcgaacggcgggctcatcgaggggat 462 Query: 420 cgccgactacgtgcggctcaaggccgggttcgcgccggggcactgggtgaagccggggca 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 463 cgccgactacgtgcggctcaaggccgggttcgcgccggggcactgggtgaagccggggca 522 Query: 480 gggagaccggtgggatcaggggtacgacgtcacggcgaggttcctcgactactgcgactc 539 ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 523 gggcgaccggtgggatcaggggtacgacgtcacggcgaggttccttgactactgcgactc 582 Query: 540 actgaagcccgggttcgtcgcgcagctcaacgccaagatgaagagtgggtacaccgacga 599 || |||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 583 gctcaagcccgggttcgtcgcgcacgtcaacgccaagatgaagagtgggtacaccgacga 642 Query: 600 cttcttcgcgcagattctcggcaagaacgtgcagcagctgtgg 642 ||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 643 cttcttcgcgcagattctcgggaagaacgtgcagcagctgtgg 685
>emb|Y14202.1|HVY14202 Hordeum vulgare mRNA for hypothetical protein, clone pBH6-17 Length = 859 Score = 753 bits (380), Expect = 0.0 Identities = 575/640 (89%) Strand = Plus / Plus Query: 3 tcaggtagccacggtcgcctctttcctcctggtggccttggccgcgacggcccaggcagt 62 ||||||||||||||| |||| |||||||||||| || ||||||||||||| | || || Sbjct: 49 tcaggtagccacggtagccttcttcctcctggtgaccatggccgcgacggcgcgcgccgt 108 Query: 63 gacgttcgacgcgtcgaacaaggcgtcgggcacctccggcggccggctgttcgagcaggc 122 |||||||||||||||||||| ||||||||||||| ||||||||| || ||||| | || Sbjct: 109 gacgttcgacgcgtcgaacacggcgtcgggcaccgccggcggccagcgcttcgacaacgc 168 Query: 123 cgtcggcctcccgtactccaagaaggtcctctccgaggcctccgccttcatctggaaaac 182 |||||||||| | ||||| ||| ||||||||||||| |||||| ||||||||||||| || Sbjct: 169 cgtcggcctcgcctactcgaagcaggtcctctccgacgcctccaccttcatctggaacac 228 Query: 183 cttcaaccagcgcgccgtcggcgaccgcaagcctgtcaacgccgtcaccctcgtcgtcga 242 ||||||||||||||||| | ||||||||||| ||| ||||||||||||||||||| || Sbjct: 229 cttcaaccagcgcgccgctgcggaccgcaagcccgtcgacgccgtcaccctcgtcgtgga 288 Query: 243 ggacatcagcggcgtcgccttcaccagcgccaacggcatccacctcagcgcccagtacgt 302 ||||||| |||||||||||||| |||||| |||||||||||||||||||||| ||||||| Sbjct: 289 ggacatcggcggcgtcgccttcgccagcggcaacggcatccacctcagcgccaagtacgt 348 Query: 303 cgccagcatctccggcgatgtcaagaaggaggtgaccggcgtgctgtaccacgaggcgac 362 || | || ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 349 cggcggctactccggcgacgtcaagaaggaggtgaccggcgtgctgtaccacgaggcgac 408 Query: 363 gcacgtgtggcagtggaacgggcagggcaaggcgaacggcgggctcatcgaggggatcgc 422 |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 409 ccacgtgtggcagtggaacgggcggggcacggcgaacggcgggctcatcgaggggatcgc 468 Query: 423 cgactacgtgcggctcaaggccgggttcgcgccggggcactgggtgaagccggggcaggg 482 ||||||||||||||||||||||||| | ||||||||||||||| | || |||| || Sbjct: 469 cgactacgtgcggctcaaggccgggctggcgccggggcactggaggccgcaggggagcgg 528 Query: 483 agaccggtgggatcaggggtacgacgtcacggcgaggttcctcgactactgcgactcact 542 ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| || Sbjct: 529 cgaccggtgggatcagggatacgacatcacggcgaggttcctcgactactgcgactcgct 588 Query: 543 gaagcccgggttcgtcgcgcagctcaacgccaagatgaagagtgggtacaccgacgactt 602 | ||||||||||||||||||||||||||||||||||||||| ||||||| ||| || || Sbjct: 589 catgcccgggttcgtcgcgcagctcaacgccaagatgaagagcgggtacagcgatgattt 648 Query: 603 cttcgcgcagattctcggcaagaacgtgcagcagctgtgg 642 |||||||||||||||||| |||||||| |||||||||||| Sbjct: 649 cttcgcgcagattctcgggaagaacgtccagcagctgtgg 688
>gb|AY108161.1| Zea mays PCO128916 mRNA sequence Length = 648 Score = 391 bits (197), Expect = e-105 Identities = 298/332 (89%) Strand = Plus / Plus Query: 312 ctccggcgatgtcaagaaggaggtgaccggcgtgctgtaccacgaggcgacgcacgtgtg 371 |||||| || ||||||| || || ||||||||||||||||||||| | ||||||||||| Sbjct: 12 ctccggngacgtcaagaccgaagtcaccggcgtgctgtaccacgagacaacgcacgtgtg 71 Query: 372 gcagtggaacgggcagggcaaggcgaacggcgggctcatcgaggggatcgccgactacgt 431 ||||||| ||||||||||| ||||||||||||| ||||||||||| |||||||||||||| Sbjct: 72 gcagtgggacgggcagggccaggcgaacggcggcctcatcgagggcatcgccgactacgt 131 Query: 432 gcggctcaaggccgggttcgcgccggggcactgggtgaagccggggcagggagaccggtg 491 ||||| ||||| |||| ||||||||| ||||||||| ||||||||||||| |||||||| Sbjct: 132 ccggctgaaggcggggtacgcgccgggccactgggtgcagccggggcagggggaccggtg 191 Query: 492 ggatcaggggtacgacgtcacggcgaggttcctcgactactgcgactcactgaagcccgg 551 ||| ||||||||||||||||||||||||||||| |||||||||||||| || ||||| || Sbjct: 192 ggaccaggggtacgacgtcacggcgaggttcctggactactgcgactcgctcaagccggg 251 Query: 552 gttcgtcgcgcagctcaacgccaagatgaagagtgggtacaccgacgacttcttcgcgca 611 |||||||||| ||||||||||||||||||| || |||||||||||||||||||| || Sbjct: 252 cttcgtcgcgctgctcaacgccaagatgaaggacggctacaccgacgacttcttcgccca 311 Query: 612 gattctcggcaagaacgtgcagcagctgtggc 643 ||| || ||||||| ||||||||||||||||| Sbjct: 312 gatcctgggcaagaccgtgcagcagctgtggc 343
>gb|U32431.1|TAU32431 Triticum aestivum mRNA, clone WCI-5, complete cds Length = 862 Score = 244 bits (123), Expect = 3e-61 Identities = 276/327 (84%) Strand = Plus / Plus Query: 316 ggcgatgtcaagaaggaggtgaccggcgtgctgtaccacgaggcgacgcacgtgtggcag 375 ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 346 ggcgacgtcaagaaggaggtgaagggcgtgctgtaccacgaggcgacgcacgtgtggcag 405 Query: 376 tggaacgggcagggcaaggcgaacggcgggctcatcgaggggatcgccgactacgtgcgg 435 |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 406 tggaacgggcagggcagggcaaacggcgggctcatcgaggggatcgccgactacgtgcgg 465 Query: 436 ctcaaggccgggttcgcgccggggcactgggtgaagccggggcagggagaccggtgggat 495 |||||||||| |||||||| ||||||| || |||| || ||||| ||||| Sbjct: 466 ctcaaggccgacctcgcgccgacgcactggcgcccgcaggggagcggcgaccgttgggac 525 Query: 496 caggggtacgacgtcacggcgaggttcctcgactactgcgactcactgaagcccgggttc 555 ||||||||||||| ||||| | |||||| |||||||||||||| || ||| |||||||| Sbjct: 526 gaggggtacgacgtgacggccaagttcctggactactgcgactccctcaaggccgggttc 585 Query: 556 gtcgcgcagctcaacgccaagatgaagagtgggtacaccgacgacttcttcgcgcagatt 615 || ||| || | ||| |||| | ||| || |||| |||||||| ||||| |||||| Sbjct: 586 gtggcggagatgaacagcaagctcaaggacggatacagcgacgactacttcgtgcagatc 645 Query: 616 ctcggcaagaacgtgcagcagctgtgg 642 || || |||| |||| | ||||||||| Sbjct: 646 ctggggaagagcgtggaccagctgtgg 672 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 140 ccaagaaggtcctctccgaggcctccgccttcatctggaaaaccttcaaccagc 193 ||||| |||| |||||||||||||| |||||||||||| ||||||||||||| Sbjct: 164 ccaagcaggtgctctccgaggcctcgtccttcatctggaccaccttcaaccagc 217
>ref|NM_197124.1| Oryza sativa (japonica cultivar-group) putative secretory protein (OSJNBa0051D19.12), mRNA Length = 783 Score = 210 bits (106), Expect = 4e-51 Identities = 184/210 (87%) Strand = Plus / Plus Query: 330 ggaggtgaccggcgtgctgtaccacgaggcgacgcacgtgtggcagtggaacgggcaggg 389 ||||||||||||||||||||||||||||||||||||||||||||||||| |||| | || Sbjct: 435 ggaggtgaccggcgtgctgtaccacgaggcgacgcacgtgtggcagtgggacggccgcgg 494 Query: 390 caaggcgaacggcgggctcatcgaggggatcgccgactacgtgcggctcaaggccgggtt 449 | || |||||||||| ||||||||||||||||||| ||| || || ||||| | Sbjct: 495 cggcgccgacggcgggctgatcgaggggatcgccgacttcgtccgactgcgcgccggcta 554 Query: 450 cgcgccggggcactgggtgaagccggggcagggagaccggtgggatcaggggtacgacgt 509 ||||||| |||||||||| |||| |||||||| ||||||||||| |||||||||||||| Sbjct: 555 cgcgccgccgcactgggtgcagcccgggcagggcgaccggtgggaccaggggtacgacgt 614 Query: 510 cacggcgaggttcctcgactactgcgactc 539 ||||||||||||||||||||||||||||| Sbjct: 615 gacggcgaggttcctcgactactgcgactc 644 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 550 gggttcgtcgcgcagctcaacgccaagatgaagagtgggtacaccgacgacttcttcg 607 |||||||| ||||||||||||| |||||||||| || |||| |||||||||||||| Sbjct: 661 gggttcgtggcgcagctcaacggcaagatgaaggacggatacagcgacgacttcttcg 718 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 241 gaggacatcagcggcgtcgccttcaccagcgccaacggcatccacctcagcgcccagtac 300 ||||||||| |||||| || |||||||||| | ||||||||||||| ||||| | |||| Sbjct: 340 gaggacatcgacggcgtggcgttcaccagcggcgacggcatccacctgagcgctcggtac 399 Query: 301 gtcg 304 |||| Sbjct: 400 gtcg 403 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 41 tggccgcgacggcccaggcagtgacgttcgacgcgtcgaacaaggcgtcgggcacctccg 100 |||||||||||||| || ||||||||||||||| |||||| ||||||| |||| ||| Sbjct: 138 tggccgcgacggccggcgccgtgacgttcgacgcgacgaacacggcgtcgaacaccgccg 197 Query: 101 gcgg 104 |||| Sbjct: 198 gcgg 201
>gb|AC023240.9| Oryza sativa chromosome 10 BAC OSJNBa0051D19 genomic sequence, complete sequence Length = 131984 Score = 210 bits (106), Expect = 4e-51 Identities = 184/210 (87%) Strand = Plus / Plus Query: 330 ggaggtgaccggcgtgctgtaccacgaggcgacgcacgtgtggcagtggaacgggcaggg 389 ||||||||||||||||||||||||||||||||||||||||||||||||| |||| | || Sbjct: 90171 ggaggtgaccggcgtgctgtaccacgaggcgacgcacgtgtggcagtgggacggccgcgg 90230 Query: 390 caaggcgaacggcgggctcatcgaggggatcgccgactacgtgcggctcaaggccgggtt 449 | || |||||||||| ||||||||||||||||||| ||| || || ||||| | Sbjct: 90231 cggcgccgacggcgggctgatcgaggggatcgccgacttcgtccgactgcgcgccggcta 90290 Query: 450 cgcgccggggcactgggtgaagccggggcagggagaccggtgggatcaggggtacgacgt 509 ||||||| |||||||||| |||| |||||||| ||||||||||| |||||||||||||| Sbjct: 90291 cgcgccgccgcactgggtgcagcccgggcagggcgaccggtgggaccaggggtacgacgt 90350 Query: 510 cacggcgaggttcctcgactactgcgactc 539 ||||||||||||||||||||||||||||| Sbjct: 90351 gacggcgaggttcctcgactactgcgactc 90380 Score = 101 bits (51), Expect = 3e-18 Identities = 63/67 (94%) Strand = Plus / Plus Query: 312 ctccggcgatgtcaagaaggaggtgaccggcgtgctgtaccacgaggcgacgcacgtgtg 371 ||||||||| || | || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 92509 ctccggcgacgtgaggacggaggtgaccggcgtgctgtaccacgaggcgacgcacgtgtg 92568 Query: 372 gcagtgg 378 ||||||| Sbjct: 92569 gcagtgg 92575 Score = 73.8 bits (37), Expect = 6e-10 Identities = 109/133 (81%) Strand = Plus / Minus Query: 511 acggcgaggttcctcgactactgcgactcactgaagcccgggttcgtcgcgcagctcaac 570 |||||||||||| |||||||||||||| | ||||| |||||||| || | || ||| Sbjct: 86734 acggcgaggttcttcgactactgcgacagcgtcaagccagggttcgttgccgacctgaac 86675 Query: 571 gccaagatgaagagtgggtacaccgacgacttcttcgcgcagattctcggcaagaacgtg 630 || ||| |||||| |||||||| || ||||| ||||| |||||| ||| |||| |||| Sbjct: 86674 gctaagctgaagaatgggtacaacgtcgactacttcgtgcagatcaccgggaagaccgtg 86615 Query: 631 cagcagctgtggc 643 ||||||||||||| Sbjct: 86614 cagcagctgtggc 86602 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 550 gggttcgtcgcgcagctcaacgccaagatgaagagtgggtacaccgacgacttcttcg 607 |||||||| ||||||||||||| |||||||||| || |||| |||||||||||||| Sbjct: 90397 gggttcgtggcgcagctcaacggcaagatgaaggacggatacagcgacgacttcttcg 90454 Score = 58.0 bits (29), Expect = 4e-05 Identities = 107/133 (80%) Strand = Plus / Plus Query: 511 acggcgaggttcctcgactactgcgactcactgaagcccgggttcgtcgcgcagctcaac 570 |||||||||||| |||||||||||||| | ||||| ||||||||||| | |||| Sbjct: 92711 acggcgaggttcttcgactactgcgacagcgtcaagccagggttcgtcgccgacatcaat 92770 Query: 571 gccaagatgaagagtgggtacaccgacgacttcttcgcgcagattctcggcaagaacgtg 630 |||||| ||||| ||||||| | ||||| ||||| |||||| ||| |||| |||| Sbjct: 92771 gccaagttgaaggacgggtacaatgtcgactacttcgtgcagatcaccgggaagaccgtg 92830 Query: 631 cagcagctgtggc 643 ||||||||||||| Sbjct: 92831 cagcagctgtggc 92843 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 241 gaggacatcagcggcgtcgccttcaccagcgccaacggcatccacctcagcgcccagtac 300 ||||||||| |||||| || |||||||||| | ||||||||||||| ||||| | |||| Sbjct: 92429 gaggacatcgacggcgtggcgttcaccagcggcgacggcatccacctgagcgcgcggtac 92488 Query: 301 gtcg 304 |||| Sbjct: 92489 gtcg 92492 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 241 gaggacatcagcggcgtcgccttcaccagcgccaacggcatccacctcagcgcccagtac 300 ||||||||| |||||| || |||||||||| | ||||||||||||| ||||| | |||| Sbjct: 90076 gaggacatcgacggcgtggcgttcaccagcggcgacggcatccacctgagcgctcggtac 90135 Query: 301 gtcg 304 |||| Sbjct: 90136 gtcg 90139 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 41 tggccgcgacggcccaggcagtgacgttcgacgcgtcgaacaaggcgtcgggcacctccg 100 |||||||||||||| || ||||||||||||||| |||||| ||||||| |||| ||| Sbjct: 89874 tggccgcgacggccggcgccgtgacgttcgacgcgacgaacacggcgtcgaacaccgccg 89933 Query: 101 gcgg 104 |||| Sbjct: 89934 gcgg 89937 Score = 48.1 bits (24), Expect = 0.036 Identities = 39/44 (88%) Strand = Plus / Plus Query: 61 gtgacgttcgacgcgtcgaacaaggcgtcgggcacctccggcgg 104 ||||||||||| ||| |||||| ||||||| ||||| ||||||| Sbjct: 92246 gtgacgttcgatgcgacgaacacggcgtcgagcaccgccggcgg 92289 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 411 cgaggggatcgccgactacgtgcggct 437 ||||||||||||||||| ||||||||| Sbjct: 92611 cgaggggatcgccgacttcgtgcggct 92637 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Minus Query: 332 aggtgaccggcgtgctgtaccacgaggcgacgcacgtgtggcagtgg 378 |||||||||| ||| ||||||| |||| | |||||||||||||||| Sbjct: 86916 aggtgaccggagtgttgtaccatgaggtggtgcacgtgtggcagtgg 86870
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 210 bits (106), Expect = 4e-51 Identities = 184/210 (87%) Strand = Plus / Minus Query: 330 ggaggtgaccggcgtgctgtaccacgaggcgacgcacgtgtggcagtggaacgggcaggg 389 ||||||||||||||||||||||||||||||||||||||||||||||||| |||| | || Sbjct: 18122957 ggaggtgaccggcgtgctgtaccacgaggcgacgcacgtgtggcagtgggacggccgcgg 18122898 Query: 390 caaggcgaacggcgggctcatcgaggggatcgccgactacgtgcggctcaaggccgggtt 449 | || |||||||||| ||||||||||||||||||| ||| || || ||||| | Sbjct: 18122897 cggcgccgacggcgggctgatcgaggggatcgccgacttcgtccgactgcgcgccggcta 18122838 Query: 450 cgcgccggggcactgggtgaagccggggcagggagaccggtgggatcaggggtacgacgt 509 ||||||| |||||||||| |||| |||||||| ||||||||||| |||||||||||||| Sbjct: 18122837 cgcgccgccgcactgggtgcagcccgggcagggcgaccggtgggaccaggggtacgacgt 18122778 Query: 510 cacggcgaggttcctcgactactgcgactc 539 ||||||||||||||||||||||||||||| Sbjct: 18122777 gacggcgaggttcctcgactactgcgactc 18122748 Score = 101 bits (51), Expect = 3e-18 Identities = 63/67 (94%) Strand = Plus / Minus Query: 312 ctccggcgatgtcaagaaggaggtgaccggcgtgctgtaccacgaggcgacgcacgtgtg 371 ||||||||| || | || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 18120619 ctccggcgacgtgaggacggaggtgaccggcgtgctgtaccacgaggcgacgcacgtgtg 18120560 Query: 372 gcagtgg 378 ||||||| Sbjct: 18120559 gcagtgg 18120553 Score = 73.8 bits (37), Expect = 6e-10 Identities = 109/133 (81%) Strand = Plus / Plus Query: 511 acggcgaggttcctcgactactgcgactcactgaagcccgggttcgtcgcgcagctcaac 570 |||||||||||| |||||||||||||| | ||||| |||||||| || | || ||| Sbjct: 18126394 acggcgaggttcttcgactactgcgacagcgtcaagccagggttcgttgccgacctgaac 18126453 Query: 571 gccaagatgaagagtgggtacaccgacgacttcttcgcgcagattctcggcaagaacgtg 630 || ||| |||||| |||||||| || ||||| ||||| |||||| ||| |||| |||| Sbjct: 18126454 gctaagctgaagaatgggtacaacgtcgactacttcgtgcagatcaccgggaagaccgtg 18126513 Query: 631 cagcagctgtggc 643 ||||||||||||| Sbjct: 18126514 cagcagctgtggc 18126526 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 550 gggttcgtcgcgcagctcaacgccaagatgaagagtgggtacaccgacgacttcttcg 607 |||||||| ||||||||||||| |||||||||| || |||| |||||||||||||| Sbjct: 18122731 gggttcgtggcgcagctcaacggcaagatgaaggacggatacagcgacgacttcttcg 18122674 Score = 58.0 bits (29), Expect = 4e-05 Identities = 107/133 (80%) Strand = Plus / Minus Query: 511 acggcgaggttcctcgactactgcgactcactgaagcccgggttcgtcgcgcagctcaac 570 |||||||||||| |||||||||||||| | ||||| ||||||||||| | |||| Sbjct: 18120417 acggcgaggttcttcgactactgcgacagcgtcaagccagggttcgtcgccgacatcaat 18120358 Query: 571 gccaagatgaagagtgggtacaccgacgacttcttcgcgcagattctcggcaagaacgtg 630 |||||| ||||| ||||||| | ||||| ||||| |||||| ||| |||| |||| Sbjct: 18120357 gccaagttgaaggacgggtacaatgtcgactacttcgtgcagatcaccgggaagaccgtg 18120298 Query: 631 cagcagctgtggc 643 ||||||||||||| Sbjct: 18120297 cagcagctgtggc 18120285 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 41 tggccgcgacggcccaggcagtgacgttcgacgcgtcgaacaaggcgtcgggcacctccg 100 |||||||||||||| || ||||||||||||||| |||||| ||||||| |||| ||| Sbjct: 18123254 tggccgcgacggccggcgccgtgacgttcgacgcgacgaacacggcgtcgaacaccgccg 18123195 Query: 101 gcgg 104 |||| Sbjct: 18123194 gcgg 18123191 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 241 gaggacatcagcggcgtcgccttcaccagcgccaacggcatccacctcagcgcccagtac 300 ||||||||| |||||| || |||||||||| | ||||||||||||| ||||| | |||| Sbjct: 18123052 gaggacatcgacggcgtggcgttcaccagcggcgacggcatccacctgagcgctcggtac 18122993 Query: 301 gtcg 304 |||| Sbjct: 18122992 gtcg 18122989 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 241 gaggacatcagcggcgtcgccttcaccagcgccaacggcatccacctcagcgcccagtac 300 ||||||||| |||||| || |||||||||| | ||||||||||||| ||||| | |||| Sbjct: 18120699 gaggacatcgacggcgtggcgttcaccagcggcgacggcatccacctgagcgcgcggtac 18120640 Query: 301 gtcg 304 |||| Sbjct: 18120639 gtcg 18120636 Score = 48.1 bits (24), Expect = 0.036 Identities = 39/44 (88%) Strand = Plus / Minus Query: 61 gtgacgttcgacgcgtcgaacaaggcgtcgggcacctccggcgg 104 ||||||||||| ||| |||||| ||||||| ||||| ||||||| Sbjct: 18120882 gtgacgttcgatgcgacgaacacggcgtcgagcaccgccggcgg 18120839 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 332 aggtgaccggcgtgctgtaccacgaggcgacgcacgtgtggcagtgg 378 |||||||||| ||| ||||||| |||| | |||||||||||||||| Sbjct: 18126212 aggtgaccggagtgttgtaccatgaggtggtgcacgtgtggcagtgg 18126258 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 411 cgaggggatcgccgactacgtgcggct 437 ||||||||||||||||| ||||||||| Sbjct: 18120517 cgaggggatcgccgacttcgtgcggct 18120491
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 210 bits (106), Expect = 4e-51 Identities = 184/210 (87%) Strand = Plus / Minus Query: 330 ggaggtgaccggcgtgctgtaccacgaggcgacgcacgtgtggcagtggaacgggcaggg 389 ||||||||||||||||||||||||||||||||||||||||||||||||| |||| | || Sbjct: 18132210 ggaggtgaccggcgtgctgtaccacgaggcgacgcacgtgtggcagtgggacggccgcgg 18132151 Query: 390 caaggcgaacggcgggctcatcgaggggatcgccgactacgtgcggctcaaggccgggtt 449 | || |||||||||| ||||||||||||||||||| ||| || || ||||| | Sbjct: 18132150 cggcgccgacggcgggctgatcgaggggatcgccgacttcgtccgactgcgcgccggcta 18132091 Query: 450 cgcgccggggcactgggtgaagccggggcagggagaccggtgggatcaggggtacgacgt 509 ||||||| |||||||||| |||| |||||||| ||||||||||| |||||||||||||| Sbjct: 18132090 cgcgccgccgcactgggtgcagcccgggcagggcgaccggtgggaccaggggtacgacgt 18132031 Query: 510 cacggcgaggttcctcgactactgcgactc 539 ||||||||||||||||||||||||||||| Sbjct: 18132030 gacggcgaggttcctcgactactgcgactc 18132001 Score = 101 bits (51), Expect = 3e-18 Identities = 63/67 (94%) Strand = Plus / Minus Query: 312 ctccggcgatgtcaagaaggaggtgaccggcgtgctgtaccacgaggcgacgcacgtgtg 371 ||||||||| || | || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 18129872 ctccggcgacgtgaggacggaggtgaccggcgtgctgtaccacgaggcgacgcacgtgtg 18129813 Query: 372 gcagtgg 378 ||||||| Sbjct: 18129812 gcagtgg 18129806 Score = 73.8 bits (37), Expect = 6e-10 Identities = 109/133 (81%) Strand = Plus / Plus Query: 511 acggcgaggttcctcgactactgcgactcactgaagcccgggttcgtcgcgcagctcaac 570 |||||||||||| |||||||||||||| | ||||| |||||||| || | || ||| Sbjct: 18135647 acggcgaggttcttcgactactgcgacagcgtcaagccagggttcgttgccgacctgaac 18135706 Query: 571 gccaagatgaagagtgggtacaccgacgacttcttcgcgcagattctcggcaagaacgtg 630 || ||| |||||| |||||||| || ||||| ||||| |||||| ||| |||| |||| Sbjct: 18135707 gctaagctgaagaatgggtacaacgtcgactacttcgtgcagatcaccgggaagaccgtg 18135766 Query: 631 cagcagctgtggc 643 ||||||||||||| Sbjct: 18135767 cagcagctgtggc 18135779 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 550 gggttcgtcgcgcagctcaacgccaagatgaagagtgggtacaccgacgacttcttcg 607 |||||||| ||||||||||||| |||||||||| || |||| |||||||||||||| Sbjct: 18131984 gggttcgtggcgcagctcaacggcaagatgaaggacggatacagcgacgacttcttcg 18131927 Score = 58.0 bits (29), Expect = 4e-05 Identities = 107/133 (80%) Strand = Plus / Minus Query: 511 acggcgaggttcctcgactactgcgactcactgaagcccgggttcgtcgcgcagctcaac 570 |||||||||||| |||||||||||||| | ||||| ||||||||||| | |||| Sbjct: 18129670 acggcgaggttcttcgactactgcgacagcgtcaagccagggttcgtcgccgacatcaat 18129611 Query: 571 gccaagatgaagagtgggtacaccgacgacttcttcgcgcagattctcggcaagaacgtg 630 |||||| ||||| ||||||| | ||||| ||||| |||||| ||| |||| |||| Sbjct: 18129610 gccaagttgaaggacgggtacaatgtcgactacttcgtgcagatcaccgggaagaccgtg 18129551 Query: 631 cagcagctgtggc 643 ||||||||||||| Sbjct: 18129550 cagcagctgtggc 18129538 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 41 tggccgcgacggcccaggcagtgacgttcgacgcgtcgaacaaggcgtcgggcacctccg 100 |||||||||||||| || ||||||||||||||| |||||| ||||||| |||| ||| Sbjct: 18132507 tggccgcgacggccggcgccgtgacgttcgacgcgacgaacacggcgtcgaacaccgccg 18132448 Query: 101 gcgg 104 |||| Sbjct: 18132447 gcgg 18132444 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 241 gaggacatcagcggcgtcgccttcaccagcgccaacggcatccacctcagcgcccagtac 300 ||||||||| |||||| || |||||||||| | ||||||||||||| ||||| | |||| Sbjct: 18132305 gaggacatcgacggcgtggcgttcaccagcggcgacggcatccacctgagcgctcggtac 18132246 Query: 301 gtcg 304 |||| Sbjct: 18132245 gtcg 18132242 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 241 gaggacatcagcggcgtcgccttcaccagcgccaacggcatccacctcagcgcccagtac 300 ||||||||| |||||| || |||||||||| | ||||||||||||| ||||| | |||| Sbjct: 18129952 gaggacatcgacggcgtggcgttcaccagcggcgacggcatccacctgagcgcgcggtac 18129893 Query: 301 gtcg 304 |||| Sbjct: 18129892 gtcg 18129889 Score = 48.1 bits (24), Expect = 0.036 Identities = 39/44 (88%) Strand = Plus / Minus Query: 61 gtgacgttcgacgcgtcgaacaaggcgtcgggcacctccggcgg 104 ||||||||||| ||| |||||| ||||||| ||||| ||||||| Sbjct: 18130135 gtgacgttcgatgcgacgaacacggcgtcgagcaccgccggcgg 18130092 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 332 aggtgaccggcgtgctgtaccacgaggcgacgcacgtgtggcagtgg 378 |||||||||| ||| ||||||| |||| | |||||||||||||||| Sbjct: 18135465 aggtgaccggagtgttgtaccatgaggtggtgcacgtgtggcagtgg 18135511 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 411 cgaggggatcgccgactacgtgcggct 437 ||||||||||||||||| ||||||||| Sbjct: 18129770 cgaggggatcgccgacttcgtgcggct 18129744
>emb|Y14201.1|HVY14201 Hordeum vulgare mRNA for hypothetical protein, clone pBH6-12 Length = 829 Score = 103 bits (52), Expect = 7e-19 Identities = 174/212 (82%), Gaps = 2/212 (0%) Strand = Plus / Plus Query: 410 tcgaggggatcgccgactacgtgcggctcaaggccgggttcgcgccggggcactgggtga 469 ||||||||||||| ||||||||||||||||||||||||| || ||| | ||||||||| Sbjct: 430 tcgaggggatcgcggactacgtgcggctcaaggccgggtacgtagcggcgaactgggtga 489 Query: 470 agccggg-gcagggagaccggtgggatcaggggtacgacgtcacggcgaggttcctcgac 528 || ||| | || || ||||||||| |||| |||||||| ||||| |||||||| ||| Sbjct: 490 aggagggcggcggcag-ccggtgggacgagggatacgacgtgacggccaggttcctggac 548 Query: 529 tactgcgactcactgaagcccgggttcgtcgcgcagctcaacgccaagatgaagagtggg 588 ||||||||||| | |||||||||||||| ||| || | |||| |||| | ||| || Sbjct: 549 tactgcgactcgcgcaagcccgggttcgtggcggagatgaacggcaagctcaaggacggc 608 Query: 589 tacaccgacgacttcttcgcgcagattctcgg 620 |||| |||||||| ||||| |||||| ||||| Sbjct: 609 tacaacgacgactacttcgtgcagatcctcgg 640 Score = 48.1 bits (24), Expect = 0.036 Identities = 33/36 (91%) Strand = Plus / Plus Query: 343 gtgctgtaccacgaggcgacgcacgtgtggcagtgg 378 |||||||||||||||| | |||||||||||||||| Sbjct: 360 gtgctgtaccacgaggtggtgcacgtgtggcagtgg 395
>ref|NM_197123.1| Oryza sativa (japonica cultivar-group) putative secretory protein (OSJNBa0051D19.13), mRNA Length = 702 Score = 101 bits (51), Expect = 3e-18 Identities = 63/67 (94%) Strand = Plus / Plus Query: 312 ctccggcgatgtcaagaaggaggtgaccggcgtgctgtaccacgaggcgacgcacgtgtg 371 ||||||||| || | || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 339 ctccggcgacgtgaggacggaggtgaccggcgtgctgtaccacgaggcgacgcacgtgtg 398 Query: 372 gcagtgg 378 ||||||| Sbjct: 399 gcagtgg 405 Score = 58.0 bits (29), Expect = 4e-05 Identities = 107/133 (80%) Strand = Plus / Plus Query: 511 acggcgaggttcctcgactactgcgactcactgaagcccgggttcgtcgcgcagctcaac 570 |||||||||||| |||||||||||||| | ||||| ||||||||||| | |||| Sbjct: 541 acggcgaggttcttcgactactgcgacagcgtcaagccagggttcgtcgccgacatcaat 600 Query: 571 gccaagatgaagagtgggtacaccgacgacttcttcgcgcagattctcggcaagaacgtg 630 |||||| ||||| ||||||| | ||||| ||||| |||||| ||| |||| |||| Sbjct: 601 gccaagttgaaggacgggtacaatgtcgactacttcgtgcagatcaccgggaagaccgtg 660 Query: 631 cagcagctgtggc 643 ||||||||||||| Sbjct: 661 cagcagctgtggc 673 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 241 gaggacatcagcggcgtcgccttcaccagcgccaacggcatccacctcagcgcccagtac 300 ||||||||| |||||| || |||||||||| | ||||||||||||| ||||| | |||| Sbjct: 259 gaggacatcgacggcgtggcgttcaccagcggcgacggcatccacctgagcgcgcggtac 318 Query: 301 gtcg 304 |||| Sbjct: 319 gtcg 322 Score = 48.1 bits (24), Expect = 0.036 Identities = 39/44 (88%) Strand = Plus / Plus Query: 61 gtgacgttcgacgcgtcgaacaaggcgtcgggcacctccggcgg 104 ||||||||||| ||| |||||| ||||||| ||||| ||||||| Sbjct: 76 gtgacgttcgatgcgacgaacacggcgtcgagcaccgccggcgg 119 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 411 cgaggggatcgccgactacgtgcggct 437 ||||||||||||||||| ||||||||| Sbjct: 441 cgaggggatcgccgacttcgtgcggct 467
>ref|NM_197125.1| Oryza sativa (japonica cultivar-group) putative basic secretory protein (OSJNBa0051D19.25), mRNA Length = 690 Score = 73.8 bits (37), Expect = 6e-10 Identities = 109/133 (81%) Strand = Plus / Plus Query: 511 acggcgaggttcctcgactactgcgactcactgaagcccgggttcgtcgcgcagctcaac 570 |||||||||||| |||||||||||||| | ||||| |||||||| || | || ||| Sbjct: 529 acggcgaggttcttcgactactgcgacagcgtcaagccagggttcgttgccgacctgaac 588 Query: 571 gccaagatgaagagtgggtacaccgacgacttcttcgcgcagattctcggcaagaacgtg 630 || ||| |||||| |||||||| || ||||| ||||| |||||| ||| |||| |||| Sbjct: 589 gctaagctgaagaatgggtacaacgtcgactacttcgtgcagatcaccgggaagaccgtg 648 Query: 631 cagcagctgtggc 643 ||||||||||||| Sbjct: 649 cagcagctgtggc 661 Score = 48.1 bits (24), Expect = 0.036 Identities = 48/56 (85%) Strand = Plus / Plus Query: 323 tcaagaaggaggtgaccggcgtgctgtaccacgaggcgacgcacgtgtggcagtgg 378 |||||| | |||||||||| ||| ||||||| |||| | |||||||||||||||| Sbjct: 338 tcaagacgcaggtgaccggagtgttgtaccatgaggtggtgcacgtgtggcagtgg 393
>dbj|AK100816.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023122C23, full insert sequence Length = 856 Score = 73.8 bits (37), Expect = 6e-10 Identities = 109/133 (81%) Strand = Plus / Plus Query: 511 acggcgaggttcctcgactactgcgactcactgaagcccgggttcgtcgcgcagctcaac 570 |||||||||||| |||||||||||||| | ||||| |||||||| || | || ||| Sbjct: 549 acggcgaggttcttcgactactgcgacagcgtcaagccagggttcgttgccgacctgaac 608 Query: 571 gccaagatgaagagtgggtacaccgacgacttcttcgcgcagattctcggcaagaacgtg 630 || ||| |||||| |||||||| || ||||| ||||| |||||| ||| |||| |||| Sbjct: 609 gctaagctgaagaatgggtacaacgtcgactacttcgtgcagatcaccgggaagaccgtg 668 Query: 631 cagcagctgtggc 643 ||||||||||||| Sbjct: 669 cagcagctgtggc 681 Score = 48.1 bits (24), Expect = 0.036 Identities = 48/56 (85%) Strand = Plus / Plus Query: 323 tcaagaaggaggtgaccggcgtgctgtaccacgaggcgacgcacgtgtggcagtgg 378 |||||| | |||||||||| ||| ||||||| |||| | |||||||||||||||| Sbjct: 358 tcaagacgcaggtgaccggagtgttgtaccatgaggtggtgcacgtgtggcagtgg 413
>dbj|AK059607.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-F02, full insert sequence Length = 852 Score = 73.8 bits (37), Expect = 6e-10 Identities = 109/133 (81%) Strand = Plus / Plus Query: 511 acggcgaggttcctcgactactgcgactcactgaagcccgggttcgtcgcgcagctcaac 570 |||||||||||| |||||||||||||| | ||||| |||||||| || | || ||| Sbjct: 545 acggcgaggttcttcgactactgcgacagcgtcaagccagggttcgttgccgacctgaac 604 Query: 571 gccaagatgaagagtgggtacaccgacgacttcttcgcgcagattctcggcaagaacgtg 630 || ||| |||||| |||||||| || ||||| ||||| |||||| ||| |||| |||| Sbjct: 605 gctaagctgaagaatgggtacaacgtcgactacttcgtgcagatcaccgggaagaccgtg 664 Query: 631 cagcagctgtggc 643 ||||||||||||| Sbjct: 665 cagcagctgtggc 677 Score = 48.1 bits (24), Expect = 0.036 Identities = 48/56 (85%) Strand = Plus / Plus Query: 323 tcaagaaggaggtgaccggcgtgctgtaccacgaggcgacgcacgtgtggcagtgg 378 |||||| | |||||||||| ||| ||||||| |||| | |||||||||||||||| Sbjct: 354 tcaagacgcaggtgaccggagtgttgtaccatgaggtggtgcacgtgtggcagtgg 409
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 446 ggttcgcgccggggcactgggtg 468 ||||||||||||||||||||||| Sbjct: 3952418 ggttcgcgccggggcactgggtg 3952396
>gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, complete sequence Length = 384518 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 251 gcggcgtcgccttcaccagcgc 272 |||||||||||||||||||||| Sbjct: 257698 gcggcgtcgccttcaccagcgc 257719
>gb|AC018618.5|AC018618 Homo sapiens chromosome 15, clone RP11-162I7, complete sequence Length = 156542 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 20 cctctttcctcctggtggcctt 41 |||||||||||||||||||||| Sbjct: 49338 cctctttcctcctggtggcctt 49359
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Minus Query: 244 gacatcagcggcgtcgccttcaccagcgcc 273 |||||||||||| ||||||||||| ||||| Sbjct: 4524362 gacatcagcggcatcgccttcaccggcgcc 4524333
>dbj|AB070946.1| Streptomyces avermitilis polyketide-8 biosynthetic gene cluster Length = 24790 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Plus Query: 244 gacatcagcggcgtcgccttcaccagcgcc 273 |||||||||||| ||||||||||| ||||| Sbjct: 20304 gacatcagcggcatcgccttcaccggcgcc 20333
>emb|AL157938.22| Human DNA sequence from clone RP11-544A12 on chromosome 9q34.13-34.3 Contains the 3' end of the LAMC3 gene for laminin gamma 3, the gene for ionized calcium binding adaptor (IBA2), the NUP214 gene for nucleoporin 214kDa, a novel gene, a ribosomal protein L13a (RPL13A) pseudogene, the gene for a novel protein (FLJ00024) and four CpG islands, complete sequence Length = 197019 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 tctttcctcctggtggccttg 42 ||||||||||||||||||||| Sbjct: 6052 tctttcctcctggtggccttg 6072
>ref|XM_782170.1| PREDICTED: Strongylocentrotus purpuratus similar to Protein MICAL-3 (LOC582210), partial mRNA Length = 4097 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 237 cgtcgaggacatcagcggcgtcgccttca 265 ||||||||| |||||||||||||| |||| Sbjct: 1980 cgtcgaggagatcagcggcgtcgctttca 2008 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 237 cgtcgaggacatcagcggcgtcgccttca 265 ||||||||| |||||||||||||| |||| Sbjct: 1737 cgtcgaggagatcagcggcgtcgctttca 1765
>emb|BX572596.1| Rhodopseudomonas palustris CGA009 complete genome; segment 4/16 Length = 348942 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 cagcgcgccgtcggcgaccgc 210 ||||||||||||||||||||| Sbjct: 145443 cagcgcgccgtcggcgaccgc 145423
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 96 ctccggcggccggctgttcga 116 ||||||||||||||||||||| Sbjct: 1380426 ctccggcggccggctgttcga 1380446
>gb|AE005681.1| Caulobacter crescentus CB15 section 7 of 359 of the complete genome Length = 10507 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 259 gccttcaccagcgccaacggc 279 ||||||||||||||||||||| Sbjct: 4932 gccttcaccagcgccaacggc 4952
>ref|XM_690951.1| PREDICTED: Danio rerio similar to Protein MICAL-3 (LOC567652), mRNA Length = 3414 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 241 gaggacatcagcggcgtcgccttca 265 ||||| ||||||||||||||||||| Sbjct: 775 gaggagatcagcggcgtcgccttca 799
>ref|XM_690137.1| PREDICTED: Danio rerio similar to Protein MICAL-3 (LOC566850), mRNA Length = 4692 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 241 gaggacatcagcggcgtcgccttca 265 ||||| ||||||||||||||||||| Sbjct: 775 gaggagatcagcggcgtcgccttca 799
>emb|BX465859.13| Zebrafish DNA sequence from clone DKEYP-67G10 in linkage group 4, complete sequence Length = 214205 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 241 gaggacatcagcggcgtcgccttca 265 ||||| ||||||||||||||||||| Sbjct: 173144 gaggagatcagcggcgtcgccttca 173168
>gb|AE004556.1| Pseudomonas aeruginosa PAO1, section 117 of 529 of the complete genome Length = 11513 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 98 ccggcggccggctgttcgagc 118 ||||||||||||||||||||| Sbjct: 3562 ccggcggccggctgttcgagc 3542
>emb|BX649514.8| Zebrafish DNA sequence from clone CH211-232P6 in linkage group 4, complete sequence Length = 152488 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 241 gaggacatcagcggcgtcgccttca 265 ||||| ||||||||||||||||||| Sbjct: 87794 gaggagatcagcggcgtcgccttca 87770
>emb|BX649444.12| Zebrafish DNA sequence from clone DKEYP-27E10 in linkage group 4, complete sequence Length = 85097 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 241 gaggacatcagcggcgtcgccttca 265 ||||| ||||||||||||||||||| Sbjct: 731 gaggagatcagcggcgtcgccttca 707
>emb|BX901962.8| Zebrafish DNA sequence from clone DKEY-153K10 in linkage group 4, complete sequence Length = 182550 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 241 gaggacatcagcggcgtcgccttca 265 ||||| ||||||||||||||||||| Sbjct: 181281 gaggagatcagcggcgtcgccttca 181257
>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome Length = 4969803 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 563 agctcaacgccaagatgaaga 583 ||||||||||||||||||||| Sbjct: 1387661 agctcaacgccaagatgaaga 1387681
>dbj|AB024600.1| Nicotiana tabacum mRNA for NtPRp27, complete cds Length = 1560 Score = 42.1 bits (21), Expect = 2.2 Identities = 60/73 (82%) Strand = Plus / Plus Query: 434 ggctcaaggccgggttcgcgccggggcactgggtgaagccggggcagggagaccggtggg 493 ||||||| ||||| ||||| || | ||||||||||| || || ||||| ||||| |||| Sbjct: 1091 ggctcaaagccggtttcgcacctagccactgggtgaaaccaggccagggcgaccgatggg 1150 Query: 494 atcaggggtacga 506 | ||||| ||||| Sbjct: 1151 accagggctacga 1163
>ref|XM_508004.1| PREDICTED: Pan troglodytes similar to suppressor of fused (LOC450699), mRNA Length = 1987 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 gcagtggaacgggcagggca 391 |||||||||||||||||||| Sbjct: 433 gcagtggaacgggcagggca 452
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 244 gacatcagcggcgtcgccttcacc 267 ||||||| |||||||||||||||| Sbjct: 2928534 gacatcatcggcgtcgccttcacc 2928511 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 ccggctgttcgagcaggccg 124 |||||||||||||||||||| Sbjct: 2363570 ccggctgttcgagcaggccg 2363551
>gb|BC013291.2| Homo sapiens suppressor of fused homolog (Drosophila), mRNA (cDNA clone MGC:3346 IMAGE:3533158), complete cds Length = 2238 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 gcagtggaacgggcagggca 391 |||||||||||||||||||| Sbjct: 803 gcagtggaacgggcagggca 822
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 cgagcaggccgtcggcctcc 133 |||||||||||||||||||| Sbjct: 3199042 cgagcaggccgtcggcctcc 3199023
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 cagcgcccagtacgtcgcca 307 |||||||||||||||||||| Sbjct: 4381324 cagcgcccagtacgtcgcca 4381343 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 cttcaaccagcgcgccgtcg 202 |||||||||||||||||||| Sbjct: 1716228 cttcaaccagcgcgccgtcg 1716209
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 cttcaaccagcgcgccgtcg 202 |||||||||||||||||||| Sbjct: 1545848 cttcaaccagcgcgccgtcg 1545829
>emb|AL591793.1|SME591793 Sinorhizobium meliloti 1021 complete chromosome; segment 12/12 Length = 273785 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 gcacctccggcggccggctg 111 |||||||||||||||||||| Sbjct: 79271 gcacctccggcggccggctg 79252
>gb|AY358550.1| Homo sapiens clone DNA33455 SUFU (UNQ650) mRNA, complete cds Length = 1855 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 gcagtggaacgggcagggca 391 |||||||||||||||||||| Sbjct: 782 gcagtggaacgggcagggca 801
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 cgcgccgtcggcgaccgcaa 212 |||||||||||||||||||| Sbjct: 3343185 cgcgccgtcggcgaccgcaa 3343166
>emb|AL391121.29| Human DNA sequence from clone RP11-47A8 on chromosome 10 Contains the 3' end of the SUFU gene for suppressor of fused homolog (Drosophila), the TRIM8 gene for tripartite motif-containing 8, the ARL3 gene for ADP-ribosylation factor-like 3, the SFXN2 gene for sideroflexin 2 and three CpG islands, complete sequence Length = 166600 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 gcagtggaacgggcagggca 391 |||||||||||||||||||| Sbjct: 3024 gcagtggaacgggcagggca 3043
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 600 cttcttcgcgcagattctcg 619 |||||||||||||||||||| Sbjct: 1947721 cttcttcgcgcagattctcg 1947702
>gb|AF479057.1| Triticum aestivum ocs-element binding factor 1 mRNA, partial cds Length = 633 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 234 cgtcgtcgaggacatcagcggcgtcgcc 261 |||||||||||| |||||||||||||| Sbjct: 458 cgtcgtcgaggagttcagcggcgtcgcc 485
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 606 cgcgcagattctcggcaaga 625 |||||||||||||||||||| Sbjct: 3357760 cgcgcagattctcggcaaga 3357779
>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29 Length = 292100 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 tggtggccttggccgcgacg 51 |||||||||||||||||||| Sbjct: 239634 tggtggccttggccgcgacg 239615
>gb|AE012430.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 338 of 460 of the complete genome Length = 12468 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 183 cttcaaccagcgcgccgtcggcga 206 ||||| |||||||||||||||||| Sbjct: 9981 cttcatccagcgcgccgtcggcga 9958
>dbj|AB185280.1| Oryza sativa (japonica cultivar-group) OsOBF1 mRNA for bZIP protein, complete cds Length = 1277 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 234 cgtcgtcgaggacatcagcggcgtcgcc 261 |||||||||||| |||||||||||||| Sbjct: 849 cgtcgtcgaggagttcagcggcgtcgcc 876
>dbj|AB168864.1| Macaca fascicularis testis cDNA, clone: QtsA-15450, similar to human suppressor of fused homolog (Drosophila) (SUFU), mRNA, RefSeq: NM_016169.2 Length = 1900 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 gcagtggaacgggcagggca 391 |||||||||||||||||||| Sbjct: 817 gcagtggaacgggcagggca 836
>gb|AF175770.1|AF175770 Homo sapiens suppressor of fused mRNA, complete cds Length = 2239 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 gcagtggaacgggcagggca 391 |||||||||||||||||||| Sbjct: 802 gcagtggaacgggcagggca 821
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 cgccgtcggcgaccgcaagc 214 |||||||||||||||||||| Sbjct: 3954438 cgccgtcggcgaccgcaagc 3954419
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 183 cttcaaccagcgcgccgtcggcga 206 ||||| |||||||||||||||||| Sbjct: 1227152 cttcatccagcgcgccgtcggcga 1227175
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 234 cgtcgtcgaggacatcagcggcgtcgcc 261 |||||||||||| |||||||||||||| Sbjct: 23001875 cgtcgtcgaggagttcagcggcgtcgcc 23001902
>gb|AF222345.1|AF222345 Homo sapiens suppressor of fused variant 3 mRNA, alternatively spliced, complete cds Length = 2601 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 gcagtggaacgggcagggca 391 |||||||||||||||||||| Sbjct: 710 gcagtggaacgggcagggca 729
>gb|AF159447.1|AF159447 Homo sapiens Suppressor of Fused mRNA, alternatively spliced form 2, complete cds Length = 4898 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 gcagtggaacgggcagggca 391 |||||||||||||||||||| Sbjct: 782 gcagtggaacgggcagggca 801
>gb|AF144231.1|AF144231 Homo sapiens Suppressor of Fused mRNA, alternatively spliced, complete cds Length = 1838 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 gcagtggaacgggcagggca 391 |||||||||||||||||||| Sbjct: 782 gcagtggaacgggcagggca 801
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 cgcccagtacgtcgccagca 310 |||||||||||||||||||| Sbjct: 318952 cgcccagtacgtcgccagca 318971
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 cgtcgccttcaccagcgcca 274 |||||||||||||||||||| Sbjct: 1429772 cgtcgccttcaccagcgcca 1429753
>gb|AY108024.1| Zea mays PCO086173 mRNA sequence Length = 469 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 234 cgtcgtcgaggacatcagcggcgtcgcc 261 |||||||||||| |||||||||||||| Sbjct: 162 cgtcgtcgaggagttcagcggcgtcgcc 189
>gb|AF172319.1|AF172319 Homo sapiens suppressor of fused mRNA, partial cds Length = 2071 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 gcagtggaacgggcagggca 391 |||||||||||||||||||| Sbjct: 632 gcagtggaacgggcagggca 651
>ref|NM_016169.2| Homo sapiens suppressor of fused homolog (Drosophila) (SUFU), mRNA Length = 4898 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 gcagtggaacgggcagggca 391 |||||||||||||||||||| Sbjct: 782 gcagtggaacgggcagggca 801
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 gcgcgccgtcggcgaccgca 211 |||||||||||||||||||| Sbjct: 2540787 gcgcgccgtcggcgaccgca 2540806
>gb|U65940.1|SSU65940 Streptomyces sp. cyt P-450-9-deoxo-FK506 hydroxylase (fkbD) and 31-O-demethyl-FK506 methyltransferase (fkbM) genes, complete cds Length = 2500 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 592 accgacgacttcttcgcgca 611 |||||||||||||||||||| Sbjct: 718 accgacgacttcttcgcgca 737
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 234 cgtcgtcgaggacatcagcggcgtcgcc 261 |||||||||||| |||||||||||||| Sbjct: 22930066 cgtcgtcgaggagttcagcggcgtcgcc 22930093
>emb|AL935072.4|CNS08CCO Oryza sativa chromosome 12, . BAC OSJNBa0028L05 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 155568 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 234 cgtcgtcgaggacatcagcggcgtcgcc 261 |||||||||||| |||||||||||||| Sbjct: 111152 cgtcgtcgaggagttcagcggcgtcgcc 111179
>gb|AC140941.1| Gallus gallus BAC clone TAM32-50C3 from chromosome ul, complete sequence Length = 116265 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 577 atgaagagtgggtacaccga 596 |||||||||||||||||||| Sbjct: 55267 atgaagagtgggtacaccga 55286
>emb|AL732555.7| Mouse DNA sequence from clone RP23-124I19 on chromosome 4, complete sequence Length = 157653 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 ttcatctggaaaaccttcaa 188 |||||||||||||||||||| Sbjct: 94240 ttcatctggaaaaccttcaa 94221
>gb|AY081822.1|Y081818S05 Homo sapiens suppressor of fused (SUFU) gene, exon 5 Length = 205 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 gcagtggaacgggcagggca 391 |||||||||||||||||||| Sbjct: 87 gcagtggaacgggcagggca 106 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,718,191 Number of Sequences: 3902068 Number of extensions: 3718191 Number of successful extensions: 82059 Number of sequences better than 10.0: 68 Number of HSP's better than 10.0 without gapping: 67 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 79678 Number of HSP's gapped (non-prelim): 2366 length of query: 643 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 620 effective length of database: 17,143,297,704 effective search space: 10628844576480 effective search space used: 10628844576480 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)