ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd19m15 |
|---|---|
| Clone Library Name | barley_pub |
>gb|U43493.1|HVU43493 Hordeum vulgare ribulose-1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 816 Score = 256 bits (129), Expect = 2e-65 Identities = 139/143 (97%) Strand = Plus / Plus Query: 1 aaggatnangtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtc 60 |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149 aaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtc 208 Query: 61 ttacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctc 120 |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 209 ttaccttccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctc 268 Query: 121 caagtgggtgccttgcctcgagt 143 ||||||||||||||||||||||| Sbjct: 269 caagtgggtgccttgcctcgagt 291
>emb|X00235.1|TARUB2 Wheat mRNA fragment for small subunit precursor of RuBPCase (EC 4.1.1.39 ribulosebisphosphate carboxylase) clones 234 and 406 Length = 743 Score = 248 bits (125), Expect = 4e-63 Identities = 138/143 (96%) Strand = Plus / Plus Query: 1 aaggatnangtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtc 60 |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94 aaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtc 153 Query: 61 ttacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctc 120 |||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 154 ttacctgccaccgctcagcacggaggccctcctcaagcaggtcgactacctgatccgctc 213 Query: 121 caagtgggtgccttgcctcgagt 143 ||||||||||||||||||||||| Sbjct: 214 caagtgggtgccttgcctcgagt 236
>emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9 Length = 875 Score = 248 bits (125), Expect = 4e-63 Identities = 138/143 (96%) Strand = Plus / Plus Query: 1 aaggatnangtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtc 60 |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 215 aaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtc 274 Query: 61 ttacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctc 120 |||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||| Sbjct: 275 ttacttgccaccgctcaccacggaggccctcctcaagcaggtcgactacctgatccgctc 334 Query: 121 caagtgggtgccttgcctcgagt 143 ||||||||||||||||||||||| Sbjct: 335 caagtgggtgccttgcctcgagt 357
>emb|X83095.1|ASRBCSSS A.squarrosa mRNA for ribulose-1,5-bisphosphate carboxylase/oxygenase, small subunit Length = 837 Score = 232 bits (117), Expect = 2e-58 Identities = 136/143 (95%) Strand = Plus / Plus Query: 1 aaggatnangtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtc 60 |||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 175 aaggatcaggtgcatgcaggtgtggcccatcgagggtatcaagaagttcgagaccctgtc 234 Query: 61 ttacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctc 120 ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 235 ctacttgccaccgctcagcacggagggcctccttaagcaggtcgactacctgatccgctc 294 Query: 121 caagtgggtgccttgcctcgagt 143 |||||||||||| |||||||||| Sbjct: 295 caagtgggtgccctgcctcgagt 317
>dbj|AB042066.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p9-1 Length = 739 Score = 232 bits (117), Expect = 2e-58 Identities = 126/129 (97%) Strand = Plus / Plus Query: 15 tgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccac 74 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | Sbjct: 354 tgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacctgccaccgc 413 Query: 75 tcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgcctt 134 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 414 tcagcacggaggccctcctcaagcaggtcgactacctgatccgctccaagtgggtgcctt 473 Query: 135 gcctcgagt 143 ||||||||| Sbjct: 474 gcctcgagt 482
>emb|AJ131737.1|SCE131737 Secale cereale mRNA for hypothetical protein, clone 5 Length = 845 Score = 208 bits (105), Expect = 3e-51 Identities = 126/133 (94%) Strand = Plus / Plus Query: 11 tgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgcca 70 ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 206 tgcatgcaggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgcca 265 Query: 71 ccactcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtg 130 || ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 266 cccctctccacggaggccctcctgaagcaggtcgactacctgatccgctccaagtgggtg 325 Query: 131 ccttgcctcgagt 143 || |||||||||| Sbjct: 326 ccctgcctcgagt 338
>dbj|AB042064.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p2-1 Length = 653 Score = 208 bits (105), Expect = 3e-51 Identities = 123/129 (95%) Strand = Plus / Plus Query: 15 tgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccac 74 ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||| | Sbjct: 268 tgcaggtgtggcccatcgagggcattaagaagttcgagaccctgtcctacctgccaccgc 327 Query: 75 tcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgcctt 134 ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 328 tcagcacagaggccctcctcaagcaggtcgactacctgatccgctccaagtgggtgcctt 387 Query: 135 gcctcgagt 143 ||||||||| Sbjct: 388 gcctcgagt 396
>emb|AJ635206.1| Triticum durum ssp. durum partial mRNA for putative rubisco small subunit (rbcS gene) Length = 518 Score = 200 bits (101), Expect = 8e-49 Identities = 132/143 (92%) Strand = Plus / Plus Query: 1 aaggatnangtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtc 60 |||||| | |||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 119 aaggatcaggtgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccctgtc 178 Query: 61 ttacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctc 120 |||| ||||||| ||| ||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 179 ttacctgccacccctctccacggaggccctcctgaagcaggtcgactacttgatccgctc 238 Query: 121 caagtgggtgccttgcctcgagt 143 |||||||||||| |||||||||| Sbjct: 239 caagtgggtgccctgcctcgagt 261
>dbj|AB020959.1| Secale cereale DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sec-B Length = 789 Score = 196 bits (99), Expect = 1e-47 Identities = 120/127 (94%) Strand = Plus / Plus Query: 17 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 76 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 422 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 481 Query: 77 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 136 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 482 tccacggaggccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 541 Query: 137 ctcgagt 143 ||||||| Sbjct: 542 ctcgagt 548
>dbj|AB020947.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe2-B Length = 738 Score = 196 bits (99), Expect = 1e-47 Identities = 120/127 (94%) Strand = Plus / Plus Query: 17 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 76 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 405 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 464 Query: 77 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 136 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 465 tccacggaggccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 524 Query: 137 ctcgagt 143 ||||||| Sbjct: 525 ctcgagt 531
>dbj|AB020946.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe1-B Length = 787 Score = 196 bits (99), Expect = 1e-47 Identities = 120/127 (94%) Strand = Plus / Plus Query: 17 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 76 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 420 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 479 Query: 77 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 136 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 480 tccacggaggccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 539 Query: 137 ctcgagt 143 ||||||| Sbjct: 540 ctcgagt 546
>dbj|AB020944.1| Agropyron intermedium DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Agr-A Length = 604 Score = 196 bits (99), Expect = 1e-47 Identities = 120/127 (94%) Strand = Plus / Plus Query: 17 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 76 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 237 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 296 Query: 77 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 136 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 297 tccacggaggccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 356 Query: 137 ctcgagt 143 ||||||| Sbjct: 357 ctcgagt 363
>dbj|AB020939.1| Triticum timopheevii subsp. armeniacum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ara-A Length = 604 Score = 196 bits (99), Expect = 1e-47 Identities = 123/131 (93%) Strand = Plus / Plus Query: 13 catgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccacc 72 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 233 catgcaggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacc 292 Query: 73 actcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgcc 132 ||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| Sbjct: 293 cctctccacggaggccctcctgaagcaggtcgactacctgatccgctcaaagtgggtgcc 352 Query: 133 ttgcctcgagt 143 |||||||||| Sbjct: 353 ctgcctcgagt 363
>dbj|AB042069.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:6, subclone:16 Length = 5980 Score = 196 bits (99), Expect = 1e-47 Identities = 120/127 (94%) Strand = Plus / Plus Query: 17 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 76 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 880 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 939 Query: 77 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 136 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 940 tccacggaggccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 999 Query: 137 ctcgagt 143 ||||||| Sbjct: 1000 ctcgagt 1006 Score = 145 bits (73), Expect = 4e-32 Identities = 103/113 (91%) Strand = Plus / Plus Query: 29 atcgagggcatcaagaagttcgagaccctgtcttacttgccaccactcagcacggaggcc 88 ||||||||||| |||||||| ||||||||||||||||||||||| ||| || |||||| Sbjct: 5296 atcgagggcatgaagaagtttgagaccctgtcttacttgccacccctctccatagaggcc 5355 Query: 89 ctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgcctcga 141 ||||||| ||||||| |||||||||||||||||||||||||||| |||||||| Sbjct: 5356 ctccttacgcaggtcaactacctgatccgctccaagtgggtgccctgcctcga 5408 Score = 135 bits (68), Expect = 4e-29 Identities = 113/127 (88%), Gaps = 2/127 (1%) Strand = Plus / Plus Query: 17 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 76 ||||| ||||| ||||||||||||||||||||||||| |||||| |||||||| | ||| Sbjct: 3943 caggtttggccgatcgagggcatcaagaagttcgagatcctgtc--acttgccatccctc 4000 Query: 77 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 136 || |||||||||||| |||||||||||||||||||||| ||||||||| ||||| ||| Sbjct: 4001 tccatggaggccctcctcaagcaggtcgactacctgatcccctccaagtgagtgccctgc 4060 Query: 137 ctcgagt 143 ||||||| Sbjct: 4061 ctcgagt 4067
>dbj|AB042065.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase Small subunit, complete cds, clone:p6-1 Length = 638 Score = 196 bits (99), Expect = 1e-47 Identities = 120/127 (94%) Strand = Plus / Plus Query: 17 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 76 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 255 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 314 Query: 77 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 136 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 315 tccacggaggccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 374 Query: 137 ctcgagt 143 ||||||| Sbjct: 375 ctcgagt 381
>gb|M37477.1|WHTRUBIAB T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase (RUBISCO) gene, complete cds Length = 779 Score = 192 bits (97), Expect = 2e-46 Identities = 124/133 (93%) Strand = Plus / Plus Query: 11 tgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgcca 70 ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 196 tgcatgcaggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgcca 255 Query: 71 ccactcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtg 130 || ||| ||||||||||||| | ||||||||||||||| |||||||||||||||||||| Sbjct: 256 cccctctccacggaggccctcttgaagcaggtcgactacttgatccgctccaagtgggtg 315 Query: 131 ccttgcctcgagt 143 || |||||||||| Sbjct: 316 ccctgcctcgagt 328
>dbj|AB020955.1| Triticum timopheevii subsp. armeniacum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ara-B Length = 787 Score = 188 bits (95), Expect = 3e-45 Identities = 119/127 (93%) Strand = Plus / Plus Query: 17 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 76 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 420 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 479 Query: 77 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 136 |||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 480 tccacggaagccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 539 Query: 137 ctcgagt 143 ||||||| Sbjct: 540 ctcgagt 546
>dbj|AB020954.1| Triticum urartu DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ura-B Length = 787 Score = 188 bits (95), Expect = 3e-45 Identities = 119/127 (93%) Strand = Plus / Plus Query: 17 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 76 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 420 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 479 Query: 77 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 136 |||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 480 tccacggaagccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 539 Query: 137 ctcgagt 143 ||||||| Sbjct: 540 ctcgagt 546
>dbj|AB020952.1| Aegilops searsii DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sea-B Length = 728 Score = 188 bits (95), Expect = 3e-45 Identities = 119/127 (93%) Strand = Plus / Plus Query: 17 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 76 ||||||||||| || |||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 361 caggtgtggccaattgagggcatcaagaagttcgagaccctatcttacttgccacccctc 420 Query: 77 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 136 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 421 tccacggaggccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 480 Query: 137 ctcgagt 143 ||||||| Sbjct: 481 ctcgagt 487
>dbj|AB020951.1| Aegilops bicornis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Bic-B Length = 783 Score = 188 bits (95), Expect = 3e-45 Identities = 119/127 (93%) Strand = Plus / Plus Query: 17 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 76 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 421 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 480 Query: 77 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 136 |||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 481 tccacggaagccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 540 Query: 137 ctcgagt 143 ||||||| Sbjct: 541 ctcgagt 547
>dbj|AB020950.1| Aegilops sharonensis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sha-B Length = 792 Score = 188 bits (95), Expect = 3e-45 Identities = 119/127 (93%) Strand = Plus / Plus Query: 17 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 76 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 425 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 484 Query: 77 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 136 |||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 485 tccacggaagccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 544 Query: 137 ctcgagt 143 ||||||| Sbjct: 545 ctcgagt 551
>dbj|AB020949.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-B Length = 792 Score = 188 bits (95), Expect = 3e-45 Identities = 119/127 (93%) Strand = Plus / Plus Query: 17 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 76 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 425 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 484 Query: 77 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 136 |||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 485 tccacggaagccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 544 Query: 137 ctcgagt 143 ||||||| Sbjct: 545 ctcgagt 551
>dbj|AB020943.1| Hordeum vulgare DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Hor-A Length = 605 Score = 188 bits (95), Expect = 3e-45 Identities = 119/127 (93%) Strand = Plus / Plus Query: 17 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 76 ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 238 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 297 Query: 77 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 136 | ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 298 accacggaggccctcctgaagcaggttgactacctgatccgctccaagtgggtgccctgc 357 Query: 137 ctcgagt 143 ||||||| Sbjct: 358 ctcgagt 364
>dbj|AB020938.1| Aegilops squarrosa DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Squ-A Length = 607 Score = 188 bits (95), Expect = 3e-45 Identities = 119/127 (93%) Strand = Plus / Plus Query: 17 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 76 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 240 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 299 Query: 77 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 136 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 300 tccacggaggccctcctgaagcaggtcgactacctgatccgctcaaagtgggtgccctgc 359 Query: 137 ctcgagt 143 ||||||| Sbjct: 360 ctcgagt 366
>dbj|AB020937.1| Aegilops searsii DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sea-A Length = 611 Score = 188 bits (95), Expect = 3e-45 Identities = 119/127 (93%) Strand = Plus / Plus Query: 17 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 76 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 244 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 303 Query: 77 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 136 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 304 tccacggaggccctcctgaagcaggtcgactacctgatccgctcaaagtgggtgccctgc 363 Query: 137 ctcgagt 143 ||||||| Sbjct: 364 ctcgagt 370
>dbj|AB020936.1| Aegilops bicornis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Bic-A Length = 605 Score = 188 bits (95), Expect = 3e-45 Identities = 119/127 (93%) Strand = Plus / Plus Query: 17 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 76 ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 238 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 297 Query: 77 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 136 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 298 tccacggaggccctcctaaagcaggtcgactacctgatccgctccaagtgggtgccctgc 357 Query: 137 ctcgagt 143 ||||||| Sbjct: 358 ctcgagt 364
>dbj|AB020931.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-A3 Length = 604 Score = 188 bits (95), Expect = 3e-45 Identities = 119/127 (93%) Strand = Plus / Plus Query: 17 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 76 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 237 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 296 Query: 77 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 136 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 297 tccacggaggccctcctgaagcaggtcgactacctgatccgctcaaagtgggtgccctgc 356 Query: 137 ctcgagt 143 ||||||| Sbjct: 357 ctcgagt 363
>dbj|AB020930.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-A2 Length = 604 Score = 188 bits (95), Expect = 3e-45 Identities = 119/127 (93%) Strand = Plus / Plus Query: 17 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 76 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 237 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 296 Query: 77 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 136 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 297 tccacggaggccctcctgaagcaggtcgactacctgatccgctcaaagtgggtgccctgc 356 Query: 137 ctcgagt 143 ||||||| Sbjct: 357 ctcgagt 363
>dbj|AB020929.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-A1 Length = 604 Score = 188 bits (95), Expect = 3e-45 Identities = 119/127 (93%) Strand = Plus / Plus Query: 17 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 76 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 237 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 296 Query: 77 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 136 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 297 tccacggaggccctcctgaagcaggtcgactacctgatccgctcaaagtgggtgccctgc 356 Query: 137 ctcgagt 143 ||||||| Sbjct: 357 ctcgagt 363
>dbj|AB020928.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe2-A Length = 604 Score = 188 bits (95), Expect = 3e-45 Identities = 119/127 (93%) Strand = Plus / Plus Query: 17 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 76 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 237 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 296 Query: 77 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 136 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 297 tccacggaggccctcctgaagcaggtcgactacctgatccgctcaaagtgggtgccctgc 356 Query: 137 ctcgagt 143 ||||||| Sbjct: 357 ctcgagt 363
>dbj|AB020927.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe1-A1 Length = 604 Score = 188 bits (95), Expect = 3e-45 Identities = 119/127 (93%) Strand = Plus / Plus Query: 17 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 76 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 237 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 296 Query: 77 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 136 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 297 tccacggaggccctcctgaagcaggtcgactacctgatccgctcaaagtgggtgccctgc 356 Query: 137 ctcgagt 143 ||||||| Sbjct: 357 ctcgagt 363
>dbj|AB020926.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds Length = 604 Score = 188 bits (95), Expect = 3e-45 Identities = 119/127 (93%) Strand = Plus / Plus Query: 17 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 76 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 237 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 296 Query: 77 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 136 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 297 tccacggaggccctcctgaagcaggtcgactacctgatccgctcaaagtgggtgccctgc 356 Query: 137 ctcgagt 143 ||||||| Sbjct: 357 ctcgagt 363
>dbj|AB020958.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone CS-B2 Length = 781 Score = 180 bits (91), Expect = 8e-43 Identities = 118/127 (92%) Strand = Plus / Plus Query: 17 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 76 ||||||||||| || |||||||||||||||||||||||| |||||||||||||||| ||| Sbjct: 414 caggtgtggccaattgagggcatcaagaagttcgagaccttgtcttacttgccacccctc 473 Query: 77 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 136 |||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 474 tccacggaagccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 533 Query: 137 ctcgagt 143 ||||||| Sbjct: 534 ctcgagt 540
>dbj|AB020953.1| Aegilops squarrosa DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Squ-B Length = 781 Score = 180 bits (91), Expect = 8e-43 Identities = 118/127 (92%) Strand = Plus / Plus Query: 17 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 76 ||||||||||| || |||||||||||||||||||||||| |||||||||||||||| ||| Sbjct: 414 caggtgtggccaattgagggcatcaagaagttcgagaccttgtcttacttgccacccctc 473 Query: 77 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 136 |||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 474 tccacggaagccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 533 Query: 137 ctcgagt 143 ||||||| Sbjct: 534 ctcgagt 540
>dbj|AB020934.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-A3 Length = 605 Score = 180 bits (91), Expect = 8e-43 Identities = 118/127 (92%) Strand = Plus / Plus Query: 17 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 76 ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 238 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 297 Query: 77 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 136 ||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 298 tccacagaggccctcctaaagcaggtcgactacctgatccgctccaagtgggtgccctgc 357 Query: 137 ctcgagt 143 ||||||| Sbjct: 358 ctcgagt 364
>dbj|AB020933.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-A2 Length = 605 Score = 180 bits (91), Expect = 8e-43 Identities = 118/127 (92%) Strand = Plus / Plus Query: 17 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 76 ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 238 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 297 Query: 77 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 136 ||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 298 tccacagaggccctcctaaagcaggtcgactacctgatccgctccaagtgggtgccctgc 357 Query: 137 ctcgagt 143 ||||||| Sbjct: 358 ctcgagt 364
>dbj|AB020932.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-A1 Length = 605 Score = 180 bits (91), Expect = 8e-43 Identities = 118/127 (92%) Strand = Plus / Plus Query: 17 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 76 ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 238 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 297 Query: 77 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 136 ||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 298 tccacagaggccctcctaaagcaggtcgactacctgatccgctccaagtgggtgccctgc 357 Query: 137 ctcgagt 143 ||||||| Sbjct: 358 ctcgagt 364
>dbj|AB042068.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p13-1 Length = 985 Score = 180 bits (91), Expect = 8e-43 Identities = 118/127 (92%) Strand = Plus / Plus Query: 17 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 76 ||||||||||| || ||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 602 caggtgtggccgattgagggcatcaagaagttcgagactctgtcttacttgccacccctc 661 Query: 77 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 136 ||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 662 tccacggaggccctcctgaagcaggtcgactacttgatccgctccaagtgggtgccctgc 721 Query: 137 ctcgagt 143 ||||||| Sbjct: 722 ctcgagt 728
>dbj|AB020948.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-B Length = 772 Score = 178 bits (90), Expect = 3e-42 Identities = 117/126 (92%) Strand = Plus / Plus Query: 18 aggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactca 77 |||||||||| || ||||||||||||||||||||||||||||||||||||||||| || Sbjct: 406 aggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctat 465 Query: 78 gcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgcc 137 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 466 ccacggaggccctcctgaagcaggtcgactacctgatccgctcaaagtgggtgccctgcc 525 Query: 138 tcgagt 143 |||||| Sbjct: 526 tcgagt 531
>dbj|AB020942.1| Secale cereale DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sec-A Length = 591 Score = 172 bits (87), Expect = 2e-40 Identities = 117/127 (92%) Strand = Plus / Plus Query: 17 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 76 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 224 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 283 Query: 77 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 136 |||||| |||||| | ||||||||||||||||||||||||||||||||||| || ||| Sbjct: 284 tccacggaagccctcttgaagcaggtcgactacctgatccgctccaagtgggtaccctgc 343 Query: 137 ctcgagt 143 ||||||| Sbjct: 344 ctcgagt 350
>dbj|AB020941.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone CS-A Length = 605 Score = 172 bits (87), Expect = 2e-40 Identities = 117/127 (92%) Strand = Plus / Plus Query: 17 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 76 ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 238 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 297 Query: 77 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 136 ||| ||||||||||| |||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 298 tccacagaggccctcctaaagcaggtagactacctgatccgctccaagtgggtgccctgc 357 Query: 137 ctcgagt 143 ||||||| Sbjct: 358 ctcgagt 364
>dbj|AB020940.1| Triticum turgidum subsp. dicoccoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Dic-A Length = 605 Score = 172 bits (87), Expect = 2e-40 Identities = 117/127 (92%) Strand = Plus / Plus Query: 17 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 76 ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 238 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 297 Query: 77 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 136 ||| ||||||||||| |||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 298 tccacagaggccctcctaaagcaggtagactacctgatccgctccaagtgggtgccctgc 357 Query: 137 ctcgagt 143 ||||||| Sbjct: 358 ctcgagt 364
>dbj|AB020960.1| Bromus catharticus DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Bro-B Length = 784 Score = 172 bits (87), Expect = 2e-40 Identities = 117/127 (92%) Strand = Plus / Plus Query: 17 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 76 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 417 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 476 Query: 77 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 136 ||| ||||||||||| |||||| |||||||| |||||||||||||||||||||| ||| Sbjct: 477 tccaccgaggccctcctgaagcagatcgactacttgatccgctccaagtgggtgccgtgc 536 Query: 137 ctcgagt 143 ||||||| Sbjct: 537 ctcgagt 543
>dbj|AB042067.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p10-1 Length = 629 Score = 172 bits (87), Expect = 2e-40 Identities = 117/127 (92%) Strand = Plus / Plus Query: 17 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 76 ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 246 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 305 Query: 77 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 136 ||| ||||||||||| |||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 306 tccacagaggccctcctaaagcaggtagactacctgatccgctccaagtgggtgccctgc 365 Query: 137 ctcgagt 143 ||||||| Sbjct: 366 ctcgagt 372
>gb|AF096617.1|AF096617 Avena sterilis subsp. ludoviciana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, partial cds Length = 504 Score = 168 bits (85), Expect = 3e-39 Identities = 121/133 (90%) Strand = Plus / Plus Query: 11 tgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgcca 70 ||||||||||||||||| || ||||||||||||||||||||||||||||||||| ||||| Sbjct: 124 tgcatgcaggtgtggcctattgagggcatcaagaagttcgagaccctgtcttacctgcca 183 Query: 71 ccactcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtg 130 ||||||| |||||||||||| |||||| |||||| | ||||||||||||||||||| Sbjct: 184 ccactcacagaggaggccctcctgaagcagatcgacttcttgatccgctccaagtgggtt 243 Query: 131 ccttgcctcgagt 143 ||||||||||||| Sbjct: 244 ccttgcctcgagt 256
>gb|M37328.1|WHTRUBIAA T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase (RUBISCO) gene, exons 1 and 2 Length = 2205 Score = 165 bits (83), Expect = 4e-38 Identities = 116/127 (91%) Strand = Plus / Plus Query: 17 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 76 ||||||||||| || ||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 1126 caggtgtggccaattgagggcatcaagaagtttgagaccctgtcttacttgccacccctc 1185 Query: 77 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 136 |||||| |||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1186 tccacggaagccctctcgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 1245 Query: 137 ctcgagt 143 ||||||| Sbjct: 1246 ctcgagt 1252
>dbj|AB020935.1| Aegilops sharonensis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sha-A Length = 605 Score = 165 bits (83), Expect = 4e-38 Identities = 116/127 (91%) Strand = Plus / Plus Query: 17 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 76 ||||||||||| || ||||| |||||||| |||||||||||||||||||||||||| ||| Sbjct: 238 caggtgtggccgattgagggtatcaagaaattcgagaccctgtcttacttgccacccctc 297 Query: 77 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 136 ||| ||||||||||| ||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 298 tccacagaggccctcctaaagcaggtcgactacttgatccgctccaagtgggtgccctgc 357 Query: 137 ctcgagt 143 ||||||| Sbjct: 358 ctcgagt 364
>dbj|AB020957.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone CS-B1 Length = 787 Score = 163 bits (82), Expect = 2e-37 Identities = 115/126 (91%) Strand = Plus / Plus Query: 18 aggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactca 77 |||||||||| || ||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 421 aggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacctgccacccctat 480 Query: 78 gcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgcc 137 ||||||||||||||| || ||||||||||||||||||||||| ||||||||||| |||| Sbjct: 481 ccacggaggccctcctgaaacaggtcgactacctgatccgctcaaagtgggtgccctgcc 540 Query: 138 tcgagt 143 |||||| Sbjct: 541 tcgagt 546
>dbj|AB020956.1| Triticum turgidum subsp. dicoccoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Dic-B Length = 787 Score = 163 bits (82), Expect = 2e-37 Identities = 115/126 (91%) Strand = Plus / Plus Query: 18 aggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactca 77 |||||||||| || ||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 421 aggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacctgccacccctat 480 Query: 78 gcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgcc 137 ||||||||||||||| || ||||||||||||||||||||||| ||||||||||| |||| Sbjct: 481 ccacggaggccctcctgaaacaggtcgactacctgatccgctcaaagtgggtgccctgcc 540 Query: 138 tcgagt 143 |||||| Sbjct: 541 tcgagt 546
>gb|AF192780.1|AF192780 Avena maroccana clone Ma7 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 153 bits (77), Expect = 2e-34 Identities = 126/143 (88%) Strand = Plus / Plus Query: 1 aaggatnangtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtc 60 |||||| | |||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 114 aaggatcaggtgcatgcaggtgtggccaattgagggcatcaagaagttcgagaccctgtc 173 Query: 61 ttacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctc 120 |||| |||||||||| |||||||||||| |||||| |||||| | |||||||||| Sbjct: 174 ttacctgccaccactgtcagaggaggccctcctgaagcagatcgacttcttgatccgctc 233 Query: 121 caagtgggtgccttgcctcgagt 143 ||||||||| || |||||||||| Sbjct: 234 caagtgggttccctgcctcgagt 256
>gb|AF192777.1|AF192777 Avena clauda clone Cl9 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 153 bits (77), Expect = 2e-34 Identities = 126/143 (88%) Strand = Plus / Plus Query: 1 aaggatnangtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtc 60 |||||| | |||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 114 aaggatcaggtgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccctgtc 173 Query: 61 ttacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctc 120 |||| ||||||||||| |||||||||||| |||||| |||||| | |||||||||| Sbjct: 174 ttacctgccaccactctcagaggaggccctcctgaagcagatcgacttcttgatccgctc 233 Query: 121 caagtgggtgccttgcctcgagt 143 ||||||||| || ||||| |||| Sbjct: 234 caagtgggttccctgccttgagt 256
>gb|AF192775.1|AF192775 Avena strigosa clone Str5 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 153 bits (77), Expect = 2e-34 Identities = 126/143 (88%) Strand = Plus / Plus Query: 1 aaggatnangtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtc 60 |||||| | |||||||||||||||||| || |||||||||||||||||||||||||| || Sbjct: 114 aaggatcaggtgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccctttc 173 Query: 61 ttacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctc 120 |||||||||||||||| |||||||||||| |||||| |||||| | |||||||||| Sbjct: 174 ttacttgccaccactctcggaggaggccctcctgaagcagatcgacttcttgatccgctc 233 Query: 121 caagtgggtgccttgcctcgagt 143 ||||||||| || ||||| |||| Sbjct: 234 caagtgggttccctgcctggagt 256
>gb|AF192774.1|AF192774 Avena strigosa clone Str3 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 153 bits (77), Expect = 2e-34 Identities = 126/143 (88%) Strand = Plus / Plus Query: 1 aaggatnangtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtc 60 |||||| | |||||||||||||||||| || |||||||||||||||||||||||||| || Sbjct: 114 aaggatcaggtgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccctttc 173 Query: 61 ttacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctc 120 |||||||||||||||| |||||||||||| |||||| |||||| | |||||||||| Sbjct: 174 ttacttgccaccactctcggaggaggccctcctgaagcagatcgacttcttgatccgctc 233 Query: 121 caagtgggtgccttgcctcgagt 143 ||||||||| || ||||| |||| Sbjct: 234 caagtgggttccctgcctggagt 256
>gb|AF097360.1|AF097360 Avena strigosa ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 153 bits (77), Expect = 2e-34 Identities = 126/143 (88%) Strand = Plus / Plus Query: 1 aaggatnangtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtc 60 |||||| | |||||||||||||||||| || |||||||||||||||||||||||||| || Sbjct: 114 aaggatcaggtgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccctttc 173 Query: 61 ttacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctc 120 |||||||||||||||| |||||||||||| |||||| |||||| | |||||||||| Sbjct: 174 ttacttgccaccactctcggaggaggccctcctgaagcagatcgacttcttgatccgctc 233 Query: 121 caagtgggtgccttgcctcgagt 143 ||||||||| || ||||| |||| Sbjct: 234 caagtgggttccctgcctggagt 256
>gb|AF104250.1|AF104250 Avena maroccana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 153 bits (77), Expect = 2e-34 Identities = 126/143 (88%) Strand = Plus / Plus Query: 1 aaggatnangtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtc 60 |||||| | |||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 114 aaggatcaggtgcatgcaggtgtggccaattgagggcatcaagaagttcgagaccctgtc 173 Query: 61 ttacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctc 120 |||| |||||||||| |||||||||||| |||||| |||||| | |||||||||| Sbjct: 174 ttacctgccaccactgtcagaggaggccctcctgaagcagatcgacttcttgatccgctc 233 Query: 121 caagtgggtgccttgcctcgagt 143 ||||||||| || |||||||||| Sbjct: 234 caagtgggttccctgcctcgagt 256
>gb|AF104249.1|AF104249 Avena vaviloviana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 153 bits (77), Expect = 2e-34 Identities = 119/133 (89%) Strand = Plus / Plus Query: 11 tgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgcca 70 ||||||||||||||||| || ||||||||||||||||||||||||||||||||| |||| Sbjct: 124 tgcatgcaggtgtggcctattgagggcatcaagaagttcgagaccctgtcttacctgccg 183 Query: 71 ccactcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtg 130 |||||| |||||||||||| |||||| |||||| | ||||||||||||||||||| Sbjct: 184 ccactctcagaggaggccctcctgaagcagatcgacttcttgatccgctccaagtgggtt 243 Query: 131 ccttgcctcgagt 143 ||||||||||||| Sbjct: 244 ccttgcctcgagt 256
>gb|AF192779.1|AF192779 Avena maroccana clone Ma4 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 145 bits (73), Expect = 4e-32 Identities = 118/133 (88%) Strand = Plus / Plus Query: 11 tgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgcca 70 ||||||||||||||||| || ||||||||||||||||||||||||||||||||| ||||| Sbjct: 124 tgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacctgcca 183 Query: 71 ccactcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtg 130 |||||| |||||||||||| |||||| |||||| | ||||||||||||||||||| Sbjct: 184 ccactctcagaggaggccctcctgaagcagatcgacttcttgatccgctccaagtgggtt 243 Query: 131 ccttgcctcgagt 143 || ||||| |||| Sbjct: 244 ccctgcctggagt 256
>gb|AF192778.1|AF192778 Avena sterilis subsp. ludoviciana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 145 bits (73), Expect = 4e-32 Identities = 118/133 (88%) Strand = Plus / Plus Query: 11 tgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgcca 70 ||||||||||||||||| || |||||||||||||| |||||||||||||||||| ||||| Sbjct: 124 tgcatgcaggtgtggcctattgagggcatcaagaaattcgagaccctgtcttacctgcca 183 Query: 71 ccactcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtg 130 ||||||| |||||||||||| |||||| |||||| | ||||||||||||||||||| Sbjct: 184 ccactcacagaggaggccctcctgaagcagatcgacttcttgatccgctccaagtgggtt 243 Query: 131 ccttgcctcgagt 143 || ||||| |||| Sbjct: 244 ccctgcctggagt 256
>gb|AF192776.1|AF192776 Avena clauda clone Cl5 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 145 bits (73), Expect = 4e-32 Identities = 118/133 (88%) Strand = Plus / Plus Query: 11 tgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgcca 70 ||||||||||||||||| || ||||||||||||||||||||||||||||||||| ||||| Sbjct: 124 tgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacctgcca 183 Query: 71 ccactcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtg 130 |||||| |||||||||||| |||||| |||||| | ||||||||||||||||||| Sbjct: 184 ccactctcagaggaggccctcctgaagcagatcgacttcttgatccgctccaagtgggtt 243 Query: 131 ccttgcctcgagt 143 || ||||| |||| Sbjct: 244 ccctgcctggagt 256
>gb|AF192773.1|AF192773 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 145 bits (73), Expect = 4e-32 Identities = 118/133 (88%) Strand = Plus / Plus Query: 11 tgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgcca 70 ||||||||||||||||| || ||||||||||||||||||||||||||||||||| ||||| Sbjct: 124 tgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacctgcca 183 Query: 71 ccactcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtg 130 |||||| |||||||||||| |||||| |||||| | ||||||||||||||||||| Sbjct: 184 ccactctcagaggaggccctcctgaagcagatcgacttcttgatccgctccaagtgggtt 243 Query: 131 ccttgcctcgagt 143 || ||||| |||| Sbjct: 244 ccctgcctggagt 256
>dbj|AK121444.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141B14, full insert sequence Length = 984 Score = 143 bits (72), Expect = 2e-31 Identities = 124/142 (87%) Strand = Plus / Plus Query: 2 aggatnangtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtct 61 ||||| | |||||||||||||||||| || |||||||||||||||||||||||||| || Sbjct: 340 aggatcaggtgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccctctcc 399 Query: 62 tacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctcc 121 ||| ||||||| |||| | ||||| |||||| |||||| |||| |||||| |||| ||| Sbjct: 400 tacctgccaccgctcaccgtggaggacctcctgaagcagatcgagtacctgctccgttcc 459 Query: 122 aagtgggtgccttgcctcgagt 143 ||||||||||| |||||||||| Sbjct: 460 aagtgggtgccctgcctcgagt 481
>dbj|AK119219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-F11, full insert sequence Length = 828 Score = 143 bits (72), Expect = 2e-31 Identities = 124/142 (87%) Strand = Plus / Plus Query: 2 aggatnangtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtct 61 ||||| | |||||||||||||||||| || |||||||||||||||||||||||||| || Sbjct: 186 aggatcaggtgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccctctcc 245 Query: 62 tacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctcc 121 ||| ||||||| |||| | ||||| |||||| |||||| |||| |||||| |||| ||| Sbjct: 246 tacctgccaccgctcaccgtggaggacctcctgaagcagatcgagtacctgctccgttcc 305 Query: 122 aagtgggtgccttgcctcgagt 143 ||||||||||| |||||||||| Sbjct: 306 aagtgggtgccctgcctcgagt 327
>dbj|AK070556.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062J10, full insert sequence Length = 2409 Score = 143 bits (72), Expect = 2e-31 Identities = 124/142 (87%) Strand = Plus / Plus Query: 2 aggatnangtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtct 61 ||||| | |||||||||||||||||| || |||||||||||||||||||||||||| || Sbjct: 187 aggatcaggtgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccctctcc 246 Query: 62 tacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctcc 121 ||| ||||||| |||| | ||||| |||||| |||||| |||| |||||| |||| ||| Sbjct: 247 tacctgccaccgctcaccgtggaggacctcctgaagcagatcgagtacctgctccgttcc 306 Query: 122 aagtgggtgccttgcctcgagt 143 ||||||||||| |||||||||| Sbjct: 307 aagtgggtgccctgcctcgagt 328
>dbj|AK061611.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F07, full insert sequence Length = 830 Score = 143 bits (72), Expect = 2e-31 Identities = 124/142 (87%) Strand = Plus / Plus Query: 2 aggatnangtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtct 61 ||||| | |||||||||||||||||| || |||||||||||||||||||||||||| || Sbjct: 189 aggatcaggtgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccctctcc 248 Query: 62 tacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctcc 121 ||| ||||||| |||| | ||||| |||||| |||||| |||| |||||| |||| ||| Sbjct: 249 tacctgccaccgctcaccgtggaggacctcctgaagcagatcgagtacctgctccgttcc 308 Query: 122 aagtgggtgccttgcctcgagt 143 ||||||||||| |||||||||| Sbjct: 309 aagtgggtgccctgcctcgagt 330
>gb|AF052305.1|AF052305 Oryza sativa ribulose 1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 835 Score = 143 bits (72), Expect = 2e-31 Identities = 124/142 (87%) Strand = Plus / Plus Query: 2 aggatnangtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtct 61 ||||| | |||||||||||||||||| || |||||||||||||||||||||||||| || Sbjct: 175 aggatcaggtgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccctctcc 234 Query: 62 tacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctcc 121 ||| ||||||| |||| | ||||| |||||| |||||| |||| |||||| |||| ||| Sbjct: 235 tacctgccaccgctcaccgtggaggacctcctgaagcagatcgagtacctgctccgttcc 294 Query: 122 aagtgggtgccttgcctcgagt 143 ||||||||||| |||||||||| Sbjct: 295 aagtgggtgccctgcctcgagt 316
>gb|AF017364.1|AF017364 Oryza sativa ribulose 1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 854 Score = 143 bits (72), Expect = 2e-31 Identities = 124/142 (87%) Strand = Plus / Plus Query: 2 aggatnangtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtct 61 ||||| | |||||||||||||||||| || |||||||||||||||||||||||||| ||| Sbjct: 212 aggatcaggtgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccctctct 271 Query: 62 tacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctcc 121 ||| ||||||| |||| | ||||| |||||| |||||| |||| ||||| |||| ||| Sbjct: 272 tacctgccaccgctcaccgtggaggacctcctgaagcagatcgagtacctcctccgttcc 331 Query: 122 aagtgggtgccttgcctcgagt 143 ||||||||||| |||||||||| Sbjct: 332 aagtgggtgccctgcctcgagt 353
>gb|L22155.1|RICCPRBCLA Oryza sativum mitochondrial ribulose bisphosphate carboxylase/oxygenase (rbcS) mRNA, complete cds Length = 808 Score = 143 bits (72), Expect = 2e-31 Identities = 124/142 (87%) Strand = Plus / Plus Query: 2 aggatnangtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtct 61 ||||| | |||||||||||||||||| || |||||||||||||||||||||||||| || Sbjct: 164 aggatcaggtgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccctctcc 223 Query: 62 tacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctcc 121 ||| ||||||| |||| | ||||| |||||| |||||| |||| |||||| |||| ||| Sbjct: 224 tacctgccaccgctcaccgtggaggacctcctgaagcagatcgagtacctgctccgttcc 283 Query: 122 aagtgggtgccttgcctcgagt 143 ||||||||||| |||||||||| Sbjct: 284 aagtgggtgccctgcctcgagt 305
>dbj|D00643.1|RICRUBPC1 Oryza sativa (japonica cultivar-group) mRNA for the small subunit of ribulose-1,5-bisphosphate carboxylase, complete cds, clone pOSSS1139 Length = 830 Score = 143 bits (72), Expect = 2e-31 Identities = 124/142 (87%) Strand = Plus / Plus Query: 2 aggatnangtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtct 61 ||||| | |||||||||||||||||| || |||||||||||||||||||||||||| || Sbjct: 184 aggatcaggtgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccctctcc 243 Query: 62 tacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctcc 121 ||| ||||||| |||| | ||||| |||||| |||||| |||| |||||| |||| ||| Sbjct: 244 tacctgccaccgctcaccgtggaggacctcctgaagcagatcgagtacctgctccgttcc 303 Query: 122 aagtgggtgccttgcctcgagt 143 ||||||||||| |||||||||| Sbjct: 304 aagtgggtgccctgcctcgagt 325
>gb|AF200303.1|AF200303 Avena clauda ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, nuclear gene encoding chloroplast protein, partial cds Length = 594 Score = 141 bits (71), Expect = 7e-31 Identities = 113/127 (88%) Strand = Plus / Plus Query: 17 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 76 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 220 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 279 Query: 77 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 136 |||||||||||| |||||| |||||| | ||||||||||||||||||| || ||| Sbjct: 280 tctgaggaggccctcctgaagcagatcgacttcttgatccgctccaagtgggttccctgc 339 Query: 137 ctcgagt 143 || |||| Sbjct: 340 cttgagt 346
>gb|AF097361.1|AF097361 Avena clauda ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 137 bits (69), Expect = 1e-29 Identities = 117/133 (87%) Strand = Plus / Plus Query: 11 tgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgcca 70 ||||||||||||||||| || |||||||||||||||||||||||||| |||||| ||||| Sbjct: 124 tgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccctttcttacctgcca 183 Query: 71 ccactcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtg 130 |||||| |||||||||||| |||||| |||||| | ||||||||||||||||||| Sbjct: 184 ccactctcagaggaggccctcctgaagcagatcgacttcttgatccgctccaagtgggtt 243 Query: 131 ccttgcctcgagt 143 || ||||| |||| Sbjct: 244 ccctgccttgagt 256
>gb|AF097359.1|AF097359 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 137 bits (69), Expect = 1e-29 Identities = 117/133 (87%) Strand = Plus / Plus Query: 11 tgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgcca 70 ||||||||||||||||| || ||||||||||||||||||||||||||||||||| ||||| Sbjct: 124 tgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacctgcca 183 Query: 71 ccactcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtg 130 |||||| |||||||||||| |||||| |||| | | ||||||||||||||||||| Sbjct: 184 ccactctcagaggaggccctcctgaagcagatcgaattcttgatccgctccaagtgggtt 243 Query: 131 ccttgcctcgagt 143 || ||||| |||| Sbjct: 244 ccctgcctggagt 256
>gb|AF202648.1|AF202648 Avena maroccana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 620 Score = 133 bits (67), Expect = 2e-28 Identities = 112/127 (88%) Strand = Plus / Plus Query: 17 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 76 ||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 246 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacctgccaccactg 305 Query: 77 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 136 |||||||||||| |||||| |||||| | ||||||||||||||||||| || ||| Sbjct: 306 tcagaggaggccctcctgaagcagatcgacttcttgatccgctccaagtgggttccctgc 365 Query: 137 ctcgagt 143 ||||||| Sbjct: 366 ctcgagt 372
>gb|AF202646.1|AF202646 Avena clauda clone ClG4 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 586 Score = 131 bits (66), Expect = 6e-28 Identities = 111/126 (88%) Strand = Plus / Plus Query: 18 aggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactca 77 |||||||||| || |||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 213 aggtgtggccgattgagggcatcaagaagttcgagaccctttcttacttgccaccactct 272 Query: 78 gcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgcc 137 |||||||||||| |||||| |||||| | ||||||||||||||||||| || |||| Sbjct: 273 cagaggaggccctcctaaagcagatcgacttcttgatccgctccaagtgggttccctgcc 332 Query: 138 tcgagt 143 | |||| Sbjct: 333 ttgagt 338
>gb|AY445627.1| Oryza sativa (japonica cultivar-group) ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit mRNA, complete cds; chloroplast Length = 860 Score = 129 bits (65), Expect = 2e-27 Identities = 123/143 (86%) Strand = Plus / Plus Query: 1 aaggatnangtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtc 60 |||||| | |||||||||||||||||| || |||||||||||||||||||||||||| || Sbjct: 180 aaggatcaagtgcatgcaggtgtggccaattgagggcatcaagaagttcgagaccctatc 239 Query: 61 ttacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctc 120 ||| |||||||||||| | ||||| || | |||||| |||| |||||| | || || Sbjct: 240 gtacctgccaccactcaccgtggaggatcttttgaagcagatcgagtacctgcttcgatc 299 Query: 121 caagtgggtgccttgcctcgagt 143 ||||||||||||||||||||||| Sbjct: 300 caagtgggtgccttgcctcgagt 322
>dbj|AK068555.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156H12, full insert sequence Length = 899 Score = 129 bits (65), Expect = 2e-27 Identities = 123/143 (86%) Strand = Plus / Plus Query: 1 aaggatnangtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtc 60 |||||| | |||||||||||||||||| || |||||||||||||||||||||||||| || Sbjct: 197 aaggatcaagtgcatgcaggtgtggccaattgagggcatcaagaagttcgagaccctatc 256 Query: 61 ttacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctc 120 ||| |||||||||||| | ||||| || | |||||| |||| |||||| | || || Sbjct: 257 gtacctgccaccactcaccgtggaggatcttttgaagcagatcgagtacctgcttcgatc 316 Query: 121 caagtgggtgccttgcctcgagt 143 ||||||||||||||||||||||| Sbjct: 317 caagtgggtgccttgcctcgagt 339
>emb|X00234.1|TARUB1 Wheat mRNA fragment for small subunit precursor of RuBPCase (EC 4.1.1.39) (ribulosebisphosphate carboxylase, clone 512) Length = 611 Score = 127 bits (64), Expect = 1e-26 Identities = 79/84 (94%) Strand = Plus / Plus Query: 60 cttacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgct 119 ||||| ||||||| |||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 2 cttacctgccaccgctcagcacggaggccctcctcaagcaggtggactacctgatccgct 61 Query: 120 ccaagtgggtgccttgcctcgagt 143 ||||||||||||||||||| |||| Sbjct: 62 ccaagtgggtgccttgccttgagt 85
>gb|AF202647.1|AF202647 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 593 Score = 125 bits (63), Expect = 4e-26 Identities = 111/127 (87%) Strand = Plus / Plus Query: 17 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 76 ||||| ||||| || ||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 219 caggtatggccgattgagggcatcaagaagttcgagaccctgtcttacctgccaccactc 278 Query: 77 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 136 |||||||||||| |||||| | |||| | ||||||||||||||||||| || ||| Sbjct: 279 tcagaggaggccctcctgaagcagattgacttcttgatccgctccaagtgggttccctgc 338 Query: 137 ctcgagt 143 ||||||| Sbjct: 339 ctcgagt 345
>gb|AF202645.1|AF202645 Avena clauda clone ClG2 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 600 Score = 125 bits (63), Expect = 4e-26 Identities = 111/127 (87%) Strand = Plus / Plus Query: 17 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 76 ||||||||||| | |||||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 226 caggtgtggccgactgagggcatcaagaagttcgagaccctttcttacctgccaccactc 285 Query: 77 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 136 | |||||||||||| || ||| |||||| | ||||||||||||||||||| || ||| Sbjct: 286 tccgaggaggccctcctgaaacagatcgacttcttgatccgctccaagtgggttccctgc 345 Query: 137 ctcgagt 143 ||||||| Sbjct: 346 ctcgagt 352
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 123 bits (62), Expect = 2e-25 Identities = 110/126 (87%) Strand = Plus / Minus Query: 18 aggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactca 77 |||||||||| || |||||||||||||||||||||||||| || ||| ||||||| |||| Sbjct: 10080152 aggtgtggccgattgagggcatcaagaagttcgagaccctctcctacctgccaccgctca 10080093 Query: 78 gcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgcc 137 | ||||| |||||| |||||| |||| |||||| |||| |||||||||||||| |||| Sbjct: 10080092 ccgtggaggacctcctgaagcagatcgagtacctgctccgttccaagtgggtgccctgcc 10080033 Query: 138 tcgagt 143 |||||| Sbjct: 10080032 tcgagt 10080027 Score = 109 bits (55), Expect = 2e-21 Identities = 109/127 (85%) Strand = Plus / Plus Query: 17 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 76 ||||||||||| || |||||||||||||||||||||||||| || ||| ||||||||||| Sbjct: 11261928 caggtgtggccaattgagggcatcaagaagttcgagaccctatcgtacctgccaccactc 11261987 Query: 77 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 136 | | ||||| || | |||||| |||| |||||| | || |||||||||||||||||| Sbjct: 11261988 accgtggaggatcttttgaagcagatcgagtacctgcttcgatccaagtgggtgccttgc 11262047 Query: 137 ctcgagt 143 ||||||| Sbjct: 11262048 ctcgagt 11262054 Score = 95.6 bits (48), Expect = 3e-17 Identities = 108/128 (84%) Strand = Plus / Plus Query: 16 gcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccact 75 |||||||||||| || || |||||||||||||| ||||||||||| ||| ||||||| || Sbjct: 11276590 gcaggtgtggccgattgaaggcatcaagaagtttgagaccctgtcgtacctgccaccgct 11276649 Query: 76 cagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttg 135 || |||| |||| | |||||| |||| |||||| |||| ||||| ||||||||||| Sbjct: 11276650 cacggtcgaggacctcttgaagcagatcgagtacctgctccggtccaaatgggtgccttg 11276709 Query: 136 cctcgagt 143 |||||||| Sbjct: 11276710 cctcgagt 11276717 Score = 71.9 bits (36), Expect = 5e-10 Identities = 99/120 (82%) Strand = Plus / Plus Query: 17 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 76 ||||||||||| || |||||||| |||||||||||||| ||||| |||||||| ||| | Sbjct: 11319738 caggtgtggccgattgagggcattaagaagttcgagactctgtcgtacttgccgccattg 11319797 Query: 77 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 136 | ||||| ||| | |||||| |||| |||||| |||| || ||||||||||||||| Sbjct: 11319798 acagtggaggaccttttgaagcagatcgagtacctgctccgatctaagtgggtgccttgc 11319857 Score = 42.1 bits (21), Expect = 0.45 Identities = 21/21 (100%) Strand = Plus / Plus Query: 123 agtgggtgccttgcctcgagt 143 ||||||||||||||||||||| Sbjct: 11266645 agtgggtgccttgcctcgagt 11266665
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 123 bits (62), Expect = 2e-25 Identities = 110/126 (87%) Strand = Plus / Minus Query: 18 aggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactca 77 |||||||||| || |||||||||||||||||||||||||| || ||| ||||||| |||| Sbjct: 10080037 aggtgtggccgattgagggcatcaagaagttcgagaccctctcctacctgccaccgctca 10079978 Query: 78 gcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgcc 137 | ||||| |||||| |||||| |||| |||||| |||| |||||||||||||| |||| Sbjct: 10079977 ccgtggaggacctcctgaagcagatcgagtacctgctccgttccaagtgggtgccctgcc 10079918 Query: 138 tcgagt 143 |||||| Sbjct: 10079917 tcgagt 10079912 Score = 109 bits (55), Expect = 2e-21 Identities = 109/127 (85%) Strand = Plus / Plus Query: 17 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 76 ||||||||||| || |||||||||||||||||||||||||| || ||| ||||||||||| Sbjct: 11261599 caggtgtggccaattgagggcatcaagaagttcgagaccctatcgtacctgccaccactc 11261658 Query: 77 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 136 | | ||||| || | |||||| |||| |||||| | || |||||||||||||||||| Sbjct: 11261659 accgtggaggatcttttgaagcagatcgagtacctgcttcgatccaagtgggtgccttgc 11261718 Query: 137 ctcgagt 143 ||||||| Sbjct: 11261719 ctcgagt 11261725 Score = 95.6 bits (48), Expect = 3e-17 Identities = 108/128 (84%) Strand = Plus / Plus Query: 16 gcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccact 75 |||||||||||| || || |||||||||||||| ||||||||||| ||| ||||||| || Sbjct: 11276261 gcaggtgtggccgattgaaggcatcaagaagtttgagaccctgtcgtacctgccaccgct 11276320 Query: 76 cagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttg 135 || |||| |||| | |||||| |||| |||||| |||| ||||| ||||||||||| Sbjct: 11276321 cacggtcgaggacctcttgaagcagatcgagtacctgctccggtccaaatgggtgccttg 11276380 Query: 136 cctcgagt 143 |||||||| Sbjct: 11276381 cctcgagt 11276388 Score = 71.9 bits (36), Expect = 5e-10 Identities = 99/120 (82%) Strand = Plus / Plus Query: 17 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 76 ||||||||||| || |||||||| |||||||||||||| ||||| |||||||| ||| | Sbjct: 11319409 caggtgtggccgattgagggcattaagaagttcgagactctgtcgtacttgccgccattg 11319468 Query: 77 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 136 | ||||| ||| | |||||| |||| |||||| |||| || ||||||||||||||| Sbjct: 11319469 acagtggaggaccttttgaagcagatcgagtacctgctccgatctaagtgggtgccttgc 11319528 Score = 42.1 bits (21), Expect = 0.45 Identities = 21/21 (100%) Strand = Plus / Plus Query: 123 agtgggtgccttgcctcgagt 143 ||||||||||||||||||||| Sbjct: 11266316 agtgggtgccttgcctcgagt 11266336
>emb|AL731739.4|CNS08C7O Oryza sativa chromosome 12, . BAC OSJNBa0056I18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145890 Score = 123 bits (62), Expect = 2e-25 Identities = 110/126 (87%) Strand = Plus / Plus Query: 18 aggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactca 77 |||||||||| || |||||||||||||||||||||||||| || ||| ||||||| |||| Sbjct: 82469 aggtgtggccgattgagggcatcaagaagttcgagaccctctcctacctgccaccgctca 82528 Query: 78 gcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgcc 137 | ||||| |||||| |||||| |||| |||||| |||| |||||||||||||| |||| Sbjct: 82529 ccgtggaggacctcctgaagcagatcgagtacctgctccgttccaagtgggtgccctgcc 82588 Query: 138 tcgagt 143 |||||| Sbjct: 82589 tcgagt 82594
>gb|AF017363.1|AF017363 Oryza sativa ribulose 1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 918 Score = 121 bits (61), Expect = 6e-25 Identities = 122/143 (85%) Strand = Plus / Plus Query: 1 aaggatnangtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtc 60 |||||| | |||||||||||||||||| || |||||||||||||||||||||||||| || Sbjct: 181 aaggatcaagtgcatgcaggtgtggccaattgagggcatcaagaagttcgagaccctatc 240 Query: 61 ttacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctc 120 ||| |||||||||||| | ||||| || | |||||| |||| |||||| | || || Sbjct: 241 gtacctgccaccactcaccgtggaggatcttttgaagcagatcgagtacctgcttcgatc 300 Query: 121 caagtgggtgccttgcctcgagt 143 ||||||||||||||| ||||||| Sbjct: 301 caagtgggtgccttgtctcgagt 323
>dbj|D00644.1|RICRUBPC2 Oryza sativa (japonica cultivar-group) mRNA for the small subunit of ribulose-1,5-bisphosphate carboxylase, complete cds, clone pOSSS2106 Length = 895 Score = 121 bits (61), Expect = 6e-25 Identities = 122/143 (85%) Strand = Plus / Plus Query: 1 aaggatnangtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtc 60 |||||| | || ||||||||||||||| || |||||||||||||||||||||||||| || Sbjct: 195 aaggatcaagttcatgcaggtgtggccaattgagggcatcaagaagttcgagaccctatc 254 Query: 61 ttacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctc 120 ||| |||||||||||| | ||||| || | |||||| |||| |||||| | || || Sbjct: 255 gtacctgccaccactcaccgtggaggatcttttgaagcagatcgagtacctgcttcgatc 314 Query: 121 caagtgggtgccttgcctcgagt 143 ||||||||||||||||||||||| Sbjct: 315 caagtgggtgccttgcctcgagt 337
>dbj|AB020945.1| Avena sativa DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ave-A Length = 590 Score = 117 bits (59), Expect = 9e-24 Identities = 110/127 (86%) Strand = Plus / Plus Query: 17 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 76 ||||||||||| || |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 223 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttatctgccaccactg 282 Query: 77 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 136 |||||||||| | |||||| |||||| ||||||||||||||||||||| || ||| Sbjct: 283 tcagaggaggccctcttgaagcagatcgacttcctgatccgctccaagtgggttccctgc 342 Query: 137 ctcgagt 143 || |||| Sbjct: 343 ctggagt 349
>emb|BX119951.3|CNS09S4U Oryza sativa chromosome 12, . BAC OJ1523_A01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127267 Score = 109 bits (55), Expect = 2e-21 Identities = 109/127 (85%) Strand = Plus / Minus Query: 17 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 76 ||||||||||| || |||||||||||||||||||||||||| || ||| ||||||||||| Sbjct: 110126 caggtgtggccaattgagggcatcaagaagttcgagaccctatcgtacctgccaccactc 110067 Query: 77 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 136 | | ||||| || | |||||| |||| |||||| | || |||||||||||||||||| Sbjct: 110066 accgtggaggatcttttgaagcagatcgagtacctgcttcgatccaagtgggtgccttgc 110007 Query: 137 ctcgagt 143 ||||||| Sbjct: 110006 ctcgagt 110000 Score = 95.6 bits (48), Expect = 3e-17 Identities = 108/128 (84%) Strand = Plus / Minus Query: 16 gcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccact 75 |||||||||||| || || |||||||||||||| ||||||||||| ||| ||||||| || Sbjct: 95464 gcaggtgtggccgattgaaggcatcaagaagtttgagaccctgtcgtacctgccaccgct 95405 Query: 76 cagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttg 135 || |||| |||| | |||||| |||| |||||| |||| ||||| ||||||||||| Sbjct: 95404 cacggtcgaggacctcttgaagcagatcgagtacctgctccggtccaaatgggtgccttg 95345 Query: 136 cctcgagt 143 |||||||| Sbjct: 95344 cctcgagt 95337 Score = 71.9 bits (36), Expect = 5e-10 Identities = 99/120 (82%) Strand = Plus / Minus Query: 17 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 76 ||||||||||| || |||||||| |||||||||||||| ||||| |||||||| ||| | Sbjct: 52316 caggtgtggccgattgagggcattaagaagttcgagactctgtcgtacttgccgccattg 52257 Query: 77 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 136 | ||||| ||| | |||||| |||| |||||| |||| || ||||||||||||||| Sbjct: 52256 acagtggaggaccttttgaagcagatcgagtacctgctccgatctaagtgggtgccttgc 52197 Score = 42.1 bits (21), Expect = 0.45 Identities = 21/21 (100%) Strand = Plus / Minus Query: 123 agtgggtgccttgcctcgagt 143 ||||||||||||||||||||| Sbjct: 105409 agtgggtgccttgcctcgagt 105389
>dbj|AK099574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013036G21, full insert sequence Length = 947 Score = 99.6 bits (50), Expect = 2e-18 Identities = 110/130 (84%) Strand = Plus / Plus Query: 14 atgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccacca 73 |||||||||||||| || || |||||||||||||| ||||||||||| ||| ||||||| Sbjct: 210 atgcaggtgtggccgattgaaggcatcaagaagtttgagaccctgtcgtacctgccaccg 269 Query: 74 ctcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgcct 133 |||| |||| |||| | |||||| |||| |||||| |||| ||||| ||||||||| Sbjct: 270 ctcacggtcgaggacctcttgaagcagatcgagtacctgctccggtccaaatgggtgcct 329 Query: 134 tgcctcgagt 143 |||||||||| Sbjct: 330 tgcctcgagt 339
>emb|X07515.1|OSRBCS Rice rbcS gene for ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit (EC 4.1.1.39) Length = 1110 Score = 93.7 bits (47), Expect = 1e-16 Identities = 109/127 (85%), Gaps = 2/127 (1%) Strand = Plus / Plus Query: 18 aggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactca 77 |||||||||| || |||||||||||||||||||||||||| || ||| ||||||| |||| Sbjct: 492 aggtgtggccgattgagggcatcaagaagttcgagaccctctcctacctgccaccgctca 551 Query: 78 gcacggaggccctccttaagcaggtcgactacct-gatccgctccaagtgggtgccttgc 136 | ||||| |||||| |||||| |||| ||||| | |||| ||||||| |||||| ||| Sbjct: 552 ccgtggaggacctcctgaagcagatcgagtacctagctccgttccaagt-ggtgccctgc 610 Query: 137 ctcgagt 143 ||||||| Sbjct: 611 ctcgagt 617
>dbj|AK070257.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042N11, full insert sequence Length = 845 Score = 83.8 bits (42), Expect = 1e-13 Identities = 105/126 (83%) Strand = Plus / Plus Query: 11 tgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgcca 70 ||||||||||||||||| || |||||||| |||||||||||||| ||||| |||||||| Sbjct: 203 tgcatgcaggtgtggccgattgagggcattaagaagttcgagactctgtcgtacttgccg 262 Query: 71 ccactcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtg 130 ||| | | ||||| ||| | |||||| |||| |||||| |||| || ||||||||| Sbjct: 263 ccattgacagtggaggaccttttgaagcagatcgagtacctgctccgatctaagtgggtg 322 Query: 131 ccttgc 136 |||||| Sbjct: 323 ccttgc 328
>dbj|AK068266.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149A10, full insert sequence Length = 1999 Score = 83.8 bits (42), Expect = 1e-13 Identities = 105/126 (83%) Strand = Plus / Plus Query: 11 tgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgcca 70 ||||||||||||||||| || |||||||| |||||||||||||| ||||| |||||||| Sbjct: 205 tgcatgcaggtgtggccgattgagggcattaagaagttcgagactctgtcgtacttgccg 264 Query: 71 ccactcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtg 130 ||| | | ||||| ||| | |||||| |||| |||||| |||| || ||||||||| Sbjct: 265 ccattgacagtggaggaccttttgaagcagatcgagtacctgctccgatctaagtgggtg 324 Query: 131 ccttgc 136 |||||| Sbjct: 325 ccttgc 330
>gb|AY023648.1| Oryza sativa microsatellite MRG5973 containing (TTC)X13, closest to marker S10704, genomic sequence Length = 239 Score = 71.9 bits (36), Expect = 5e-10 Identities = 54/60 (90%) Strand = Plus / Plus Query: 18 aggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactca 77 |||||||||| || |||||||||||||||||||||||||| || ||| ||||||| |||| Sbjct: 173 aggtgtggccgattgagggcatcaagaagttcgagaccctctcctacctgccaccgctca 232
>gb|AF034479.1| Zantedeschia aethiopica ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 968 Score = 71.9 bits (36), Expect = 5e-10 Identities = 60/68 (88%) Strand = Plus / Plus Query: 10 gtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgcc 69 |||||||||||||||||| ||||||| |||||||||||||||||||| ||| |||| Sbjct: 205 gtgcatgcaggtgtggccgccggagggcaagaagaagttcgagaccctgtcctacctgcc 264 Query: 70 accactca 77 |||||||| Sbjct: 265 accactca 272
>gb|AF008214.1|AF008214 Musa acuminata ribulose-1,5-bisphosphate carboxylase small subunit (rbcS1) mRNA, complete cds Length = 853 Score = 61.9 bits (31), Expect = 5e-07 Identities = 46/51 (90%) Strand = Plus / Plus Query: 10 gtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtc 60 ||||||| |||||||||| ||||||||| | |||||||| ||||||||||| Sbjct: 239 gtgcatgaaggtgtggccgatcgagggcgtgaagaagtttgagaccctgtc 289
>gb|DQ418485.1| Zingiber officinale ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit mRNA, partial cds; chloroplast Length = 367 Score = 56.0 bits (28), Expect = 3e-05 Identities = 43/48 (89%) Strand = Plus / Plus Query: 10 gtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 57 |||||||||||||||||| |||||||| | ||||||||||| ||||| Sbjct: 173 gtgcatgcaggtgtggccgatcgaggggaagaagaagttcgaaaccct 220
>emb|X17231.1|LGRBCS5B Lemna gibba rbcS gene SSU5B for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 800 Score = 54.0 bits (27), Expect = 1e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 11 tgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 57 ||||||||||||||||| |||||| ||||||||||||||||||| Sbjct: 169 tgcatgcaggtgtggccgccggagggcctcaagaagttcgagaccct 215
>emb|X17230.1|LGRBCS5A Lemna gibba rbcS gene SSU5A for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 858 Score = 54.0 bits (27), Expect = 1e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 11 tgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 57 ||||||||||||||||| |||||| ||||||||||||||||||| Sbjct: 169 tgcatgcaggtgtggccgccggagggcctcaagaagttcgagaccct 215
>emb|X77813.1|PVRBCSG P.vittata rbcS gene Length = 1380 Score = 52.0 bits (26), Expect = 5e-04 Identities = 29/30 (96%) Strand = Plus / Plus Query: 40 caagaagttcgagaccctgtcttacttgcc 69 ||||||||||||||| |||||||||||||| Sbjct: 779 caagaagttcgagacactgtcttacttgcc 808
>emb|X73136.1|PTRBC P.vittata mRNA for rubisco, small subunit Length = 618 Score = 52.0 bits (26), Expect = 5e-04 Identities = 29/30 (96%) Strand = Plus / Plus Query: 40 caagaagttcgagaccctgtcttacttgcc 69 ||||||||||||||| |||||||||||||| Sbjct: 147 caagaagttcgagacactgtcttacttgcc 176
>emb|X00137.1|LGRUBP Lemna gibba ribulose 1.5-bisphospate carboxylase small subunit (cDNA clone pLg ssu1) Length = 776 Score = 48.1 bits (24), Expect = 0.007 Identities = 48/56 (85%) Strand = Plus / Plus Query: 11 tgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttactt 66 ||||||||||||||||| |||||| | ||||||||||||||||| || ||||| Sbjct: 172 tgcatgcaggtgtggccgccggagggcctgaagaagttcgagaccctctcctactt 227
>emb|X06535.1|ZMRUBSSU Maize mRNA for ribulose-1,5-bisphosphate carboxylase small subunit (RuBPC; EC 4.1.1.39) Length = 830 Score = 48.1 bits (24), Expect = 0.007 Identities = 51/60 (85%) Strand = Plus / Plus Query: 10 gtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgcc 69 |||||||||||||||||| | | |||| ||||||||||||||| ||||| ||| |||| Sbjct: 203 gtgcatgcaggtgtggccggcctacggcaacaagaagttcgagacgctgtcgtacctgcc 262
>gb|AY103730.1| Zea mays PCO095823 mRNA sequence Length = 1172 Score = 48.1 bits (24), Expect = 0.007 Identities = 51/60 (85%) Strand = Plus / Plus Query: 10 gtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgcc 69 |||||||||||||||||| | | |||| ||||||||||||||| ||||| ||| |||| Sbjct: 323 gtgcatgcaggtgtggccggcctacggcaacaagaagttcgagacgctgtcgtacctgcc 382
>gb|AF039014.1|AF039014 Fritillaria agrestis clone TA8 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 592 Score = 48.1 bits (24), Expect = 0.007 Identities = 36/40 (90%) Strand = Plus / Plus Query: 18 aggtgtggcccatcgagggcatcaagaagttcgagaccct 57 ||||||||||||||| ||| | ||||||||||||||||| Sbjct: 244 aggtgtggcccatcgtggggttgaagaagttcgagaccct 283
>gb|AF039011.1|AF039011 Fritillaria agrestis clone TA22 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 591 Score = 48.1 bits (24), Expect = 0.007 Identities = 36/40 (90%) Strand = Plus / Plus Query: 18 aggtgtggcccatcgagggcatcaagaagttcgagaccct 57 ||||||||||||||| ||| | ||||||||||||||||| Sbjct: 243 aggtgtggcccatcgtggggttgaagaagttcgagaccct 282
>gb|AF039008.1|AF039008 Fritillaria agrestis clone TA15 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 592 Score = 48.1 bits (24), Expect = 0.007 Identities = 36/40 (90%) Strand = Plus / Plus Query: 18 aggtgtggcccatcgagggcatcaagaagttcgagaccct 57 ||||||||||||||| ||| | ||||||||||||||||| Sbjct: 244 aggtgtggcccatcgtggggttgaagaagttcgagaccct 283
>dbj|D00170.1|MZEPCSSU Zea mays mRNA for ribulose 1,5-bisphosphate carboxylase small subunit, complete cds Length = 830 Score = 48.1 bits (24), Expect = 0.007 Identities = 51/60 (85%) Strand = Plus / Plus Query: 10 gtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgcc 69 |||||||||||||||||| | | |||| ||||||||||||||| ||||| ||| |||| Sbjct: 203 gtgcatgcaggtgtggccggcctacggcaacaagaagttcgagacgctgtcgtacctgcc 262
>gb|AY693395.1| Lolium perenne ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, partial cds Length = 195 Score = 46.1 bits (23), Expect = 0.029 Identities = 41/47 (87%) Strand = Plus / Plus Query: 83 gaggccctccttaagcaggtcgactacctgatccgctccaagtgggt 129 ||||||||||| |||||| |||||| ||||||||||||| ||||| Sbjct: 28 gaggccctcctgaagcagatcgactttttgatccgctccaaatgggt 74
>emb|X17234.1|LGRBCS4B Lemna gibba rbcS gene SSU40B for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 791 Score = 46.1 bits (23), Expect = 0.029 Identities = 41/47 (87%) Strand = Plus / Plus Query: 11 tgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 57 ||||||||||||||||| |||||| | ||||||||||||||||| Sbjct: 169 tgcatgcaggtgtggccgccggagggcctgaagaagttcgagaccct 215
>emb|X17233.1|LGRBCS4A Lemna gibba rbcS gene SSU40A for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 791 Score = 46.1 bits (23), Expect = 0.029 Identities = 41/47 (87%) Strand = Plus / Plus Query: 11 tgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 57 ||||||||||||||||| |||||| | ||||||||||||||||| Sbjct: 169 tgcatgcaggtgtggccgccggagggcctgaagaagttcgagaccct 215
>emb|X17232.1|LGRBCS26 Lemna gibba rbcS gene SSU26 for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 936 Score = 46.1 bits (23), Expect = 0.029 Identities = 41/47 (87%) Strand = Plus / Plus Query: 11 tgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 57 ||||||||||||||||| |||||| |||||||||| |||||||| Sbjct: 169 tgcatgcaggtgtggccgccggagggcctcaagaagtttgagaccct 215
>emb|X17235.1|LGRBCS1 Lemna gibba rbcS mRNA SSU1 for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 764 Score = 46.1 bits (23), Expect = 0.029 Identities = 41/47 (87%) Strand = Plus / Plus Query: 11 tgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 57 ||||||||||||||||| |||||| | ||||||||||||||||| Sbjct: 157 tgcatgcaggtgtggccgccggagggcctgaagaagttcgagaccct 203
>emb|AJ843975.1| Plantago major mRNA for Rubisco SSU (rbcs1a gene) Length = 761 Score = 44.1 bits (22), Expect = 0.11 Identities = 37/42 (88%) Strand = Plus / Plus Query: 102 tcgactacctgatccgctccaagtgggtgccttgcctcgagt 143 |||||||||| |||||||||||||| | |||||||| |||| Sbjct: 287 tcgactaccttctccgctccaagtggattccttgccttgagt 328
>emb|Y09214.1|ZMRUBSMSU Z.mays rubisco small subunit gene Length = 1274 Score = 44.1 bits (22), Expect = 0.11 Identities = 49/58 (84%) Strand = Plus / Plus Query: 12 gcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgcc 69 |||||||||||||||| | | |||| ||||||||||||||| ||||| ||| |||| Sbjct: 453 gcatgcaggtgtggccggcctacggcaacaagaagttcgagacgctgtcgtacctgcc 510
>gb|BC038257.1| Mus musculus cDNA clone MGC:47002 IMAGE:5148367, complete cds Length = 763 Score = 42.1 bits (21), Expect = 0.45 Identities = 33/37 (89%) Strand = Plus / Plus Query: 41 aagaagttcgagaccctgtcttacttgccaccactca 77 ||||||||||||||||| |||||| | ||||| |||| Sbjct: 251 aagaagttcgagaccctctcttaccttccacctctca 287
>dbj|AB236868.1| Panax ginseng mRNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds Length = 790 Score = 42.1 bits (21), Expect = 0.45 Identities = 33/37 (89%) Strand = Plus / Plus Query: 41 aagaagttcgagaccctgtcttacttgccaccactca 77 |||||||||||||| ||||||||| | |||| ||||| Sbjct: 242 aagaagttcgagactctgtcttacctcccacaactca 278
>gb|AF173667.1|AF173667 Beta vulgaris clone RUB109UNI ribulose bisphosphate carboxylase, small subunit (RbcS) gene, partial sequence Length = 767 Score = 42.1 bits (21), Expect = 0.45 Identities = 33/37 (89%) Strand = Plus / Minus Query: 41 aagaagttcgagaccctgtcttacttgccaccactca 77 ||||||||||||||||| |||||| | ||||| |||| Sbjct: 433 aagaagttcgagaccctctcttaccttccacctctca 397
>gb|AF039004.1|AF039004 Fritillaria agrestis clone TA9 rbcS pseudogene, partial sequence Length = 594 Score = 42.1 bits (21), Expect = 0.45 Identities = 42/49 (85%) Strand = Plus / Plus Query: 18 aggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttactt 66 |||| |||||||||| ||| | ||||||||||||||||| || ||||| Sbjct: 244 aggtctggcccatcgtggggttgaagaagttcgagaccctctcctactt 292
>gb|AY843526.1| Ammopiptanthus mongolicus ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit mRNA, complete cds; chloroplast Length = 824 Score = 40.1 bits (20), Expect = 1.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 41 aagaagttcgagaccctgtcttacttgccaccactc 76 |||||||||||||| || || ||| ||||||||||| Sbjct: 225 aagaagttcgagactctttcctacctgccaccactc 260
>ref|XM_515973.1| PREDICTED: Pan troglodytes similar to disrupted in renal carcinoma 1 (LOC459813), mRNA Length = 499 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ttacttgccaccactcagca 80 |||||||||||||||||||| Sbjct: 212 ttacttgccaccactcagca 231
>ref|NM_052952.1| Homo sapiens disrupted in renal carcinoma 1 (DIRC1), mRNA Length = 1454 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ttacttgccaccactcagca 80 |||||||||||||||||||| Sbjct: 356 ttacttgccaccactcagca 375
>gb|AY039013.1|AY039012S2 Homo sapiens disrupted in renal cancer protein (DIRC1) gene, exon 2 and complete cds Length = 1400 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ttacttgccaccactcagca 80 |||||||||||||||||||| Sbjct: 301 ttacttgccaccactcagca 320
>gb|AY039011.1| Homo sapiens disrupted in renal cancer protein (DIRC1) mRNA, complete cds Length = 1454 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ttacttgccaccactcagca 80 |||||||||||||||||||| Sbjct: 356 ttacttgccaccactcagca 375
>gb|AC148659.1| Macaca mulatta Major Histocompatibility Complex BAC MMU005H07, complete sequence Length = 174766 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 agaagttcgagaccctgtct 61 |||||||||||||||||||| Sbjct: 92667 agaagttcgagaccctgtct 92648
>dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partial and complete cds Length = 3284914 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 agaagttcgagaccctgtct 61 |||||||||||||||||||| Sbjct: 1792857 agaagttcgagaccctgtct 1792876
>dbj|D00572.1|PYPRBCO Pyrus pyrifolia var. culta mRNA for RuBisCO small subunit, complete cds Length = 844 Score = 40.1 bits (20), Expect = 1.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 aagaagttcgagaccctgtcttac 64 ||||||||||||||||| |||||| Sbjct: 253 aagaagttcgagaccctctcttac 276
>gb|AC079613.7| Homo sapiens BAC clone RP11-325O22 from 2, complete sequence Length = 164548 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 ttacttgccaccactcagca 80 |||||||||||||||||||| Sbjct: 2347 ttacttgccaccactcagca 2328
>emb|X65494.1|MSCARB Malus (unidentified species of crab apple) mRNA for rubisco-1,5-bisphosphate carboxylase Length = 853 Score = 40.1 bits (20), Expect = 1.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 aagaagttcgagaccctgtcttac 64 ||||||||||||||||| |||||| Sbjct: 257 aagaagttcgagaccctctcttac 280
>gb|AF039015.1|AF039015 Fritillaria agrestis clone TA1 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 595 Score = 40.1 bits (20), Expect = 1.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 18 aggtgtggcccatcgagggcatcaagaagttcgagaccct 57 |||| |||||||||| ||| | ||||||||||||||||| Sbjct: 244 aggtctggcccatcgtggggttgaagaagttcgagaccct 283
>gb|AF039013.1|AF039013 Fritillaria agrestis clone TA26 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 595 Score = 40.1 bits (20), Expect = 1.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 18 aggtgtggcccatcgagggcatcaagaagttcgagaccct 57 |||| |||||||||| ||| | ||||||||||||||||| Sbjct: 244 aggtctggcccatcgtggggttgaagaagttcgagaccct 283
>gb|AF039012.1|AF039012 Fritillaria agrestis clone TA27 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 595 Score = 40.1 bits (20), Expect = 1.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 18 aggtgtggcccatcgagggcatcaagaagttcgagaccct 57 |||| |||||||||| ||| | ||||||||||||||||| Sbjct: 244 aggtctggcccatcgtggggttgaagaagttcgagaccct 283
>gb|AF039010.1|AF039010 Fritillaria agrestis clone TA24 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 595 Score = 40.1 bits (20), Expect = 1.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 18 aggtgtggcccatcgagggcatcaagaagttcgagaccct 57 |||| |||||||||| ||| | ||||||||||||||||| Sbjct: 244 aggtctggcccatcgtggggttgaagaagttcgagaccct 283
>gb|AF039009.1|AF039009 Fritillaria agrestis clone TA23 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 595 Score = 40.1 bits (20), Expect = 1.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 18 aggtgtggcccatcgagggcatcaagaagttcgagaccct 57 |||| |||||||||| ||| | ||||||||||||||||| Sbjct: 244 aggtctggcccatcgtggggttgaagaagttcgagaccct 283
>gb|AF039007.1|AF039007 Fritillaria agrestis clone TA10 rbcS pseudogene, partial sequence Length = 584 Score = 40.1 bits (20), Expect = 1.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 18 aggtgtggcccatcgagggcatcaagaagttcgagaccct 57 |||| |||||||||| ||| | ||||||||||||||||| Sbjct: 233 aggtctggcccatcgtggggttgaagaagttcgagaccct 272
>gb|AF039006.1|AF039006 Fritillaria agrestis clone TA17 rbcS pseudogene, partial sequence Length = 584 Score = 40.1 bits (20), Expect = 1.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 18 aggtgtggcccatcgagggcatcaagaagttcgagaccct 57 |||| |||||||||| ||| | ||||||||||||||||| Sbjct: 233 aggtctggcccatcgtggggttgaagaagttcgagaccct 272
>gb|AF031544.1|AF031544 Fritillaria agrestis ribulose 1,5 bisphosphate carboxylase small subunit type V (rbcS5) mRNA, complete cds Length = 728 Score = 40.1 bits (20), Expect = 1.8 Identities = 41/48 (85%) Strand = Plus / Plus Query: 10 gtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 57 ||||||| | || |||||||||| ||| | ||||||||||||||||| Sbjct: 214 gtgcatgaaagtctggcccatcgtggggttgaagaagttcgagaccct 261
>gb|AF031543.1|AF031543 Fritillaria agrestis ribulose 1,5 bisphosphate carboxylase small subunit type IV (rbcS4) mRNA, complete cds Length = 732 Score = 40.1 bits (20), Expect = 1.8 Identities = 41/48 (85%) Strand = Plus / Plus Query: 10 gtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 57 ||||||| | || |||||||||| ||| | ||||||||||||||||| Sbjct: 187 gtgcatgaaagtctggcccatcgtggggttgaagaagttcgagaccct 234
>gb|AF024574.1|AF024574 Fritillaria agrestis ribulose 1,5 bisphosphate carboxylase, small subunit type III (rbcS3) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 798 Score = 40.1 bits (20), Expect = 1.8 Identities = 41/48 (85%) Strand = Plus / Plus Query: 10 gtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 57 ||||||| | || |||||||||| ||| | ||||||||||||||||| Sbjct: 192 gtgcatgaaagtctggcccatcgtggggttgaagaagttcgagaccct 239
>gb|AF024573.1|AF024573 Fritillaria agrestis ribulose 1,5 bisphosphate carboxylase, small subunit type II (rbcS2) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 784 Score = 40.1 bits (20), Expect = 1.8 Identities = 41/48 (85%) Strand = Plus / Plus Query: 10 gtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 57 ||||||| | || |||||||||| ||| | ||||||||||||||||| Sbjct: 190 gtgcatgaaagtctggcccatcgtggggttgaagaagttcgagaccct 237
>gb|AF024572.1|AF024572 Fritillaria agrestis ribulose 1,5 bisphosphate carboxylase, small subunit type I (rbcS1) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 713 Score = 40.1 bits (20), Expect = 1.8 Identities = 41/48 (85%) Strand = Plus / Plus Query: 10 gtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 57 ||||||| | || |||||||||| ||| | ||||||||||||||||| Sbjct: 186 gtgcatgaaagtctggcccatcgtggggttgaagaagttcgagaccct 233
>gb|L24497.1|PYPRBCS Pyrus malus X domestica ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, complete cds Length = 813 Score = 40.1 bits (20), Expect = 1.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 aagaagttcgagaccctgtcttac 64 ||||||||||||||||| |||||| Sbjct: 221 aagaagttcgagaccctctcttac 244
>gb|M38317.1|CIPRBCS3 Mesembryanthemum crystallinum ribulose-1,5- bisphosphate carboxylase/oxygenase small subunit (rbcS-3) mRNA, complete cds Length = 765 Score = 40.1 bits (20), Expect = 1.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 aagaagttcgagaccctgtcttac 64 |||||||||||||| ||||||||| Sbjct: 218 aagaagttcgagactctgtcttac 241
>gb|M38316.1|CIPRBCS2 Mesembryanthemum crystallinum ribulose-1,5- bisphosphate carboxylase/oxygenase small subunit (rbcS-2) mRNA, complete cds Length = 680 Score = 40.1 bits (20), Expect = 1.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 aagaagttcgagaccctgtcttac 64 |||||||||||||| ||||||||| Sbjct: 227 aagaagttcgagactctgtcttac 250
>gb|L10215.1|CIP345RSS Mesembryanthemum crystallinum (clones: rbcs-3 and -4) rubisco small subunit genes, complete cds, (clone: rbcs-5) rubisco small submnit gene, partial cds Length = 8682 Score = 40.1 bits (20), Expect = 1.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 aagaagttcgagaccctgtcttac 64 |||||||||||||| ||||||||| Sbjct: 895 aagaagttcgagactctgtcttac 918
>gb|L10214.1|CIP2RSS Mesembryanthemum crystallinum (clone: rbcs-2) rubisco small subunit gene, complete cds Length = 2671 Score = 40.1 bits (20), Expect = 1.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 aagaagttcgagaccctgtcttac 64 |||||||||||||| ||||||||| Sbjct: 1499 aagaagttcgagactctgtcttac 1522
>dbj|AB047542.1| Lilium longiflorum rbcS mRNA for ribulose 1,5 bisphosphate carboxylase small subunit, partial cds Length = 323 Score = 40.1 bits (20), Expect = 1.8 Identities = 41/48 (85%) Strand = Plus / Plus Query: 10 gtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 57 ||||||| | || |||||||||| ||| | ||||||||||||||||| Sbjct: 131 gtgcatgaaagtctggcccatcgtggggaagaagaagttcgagaccct 178
>gb|AC102140.15| Mus musculus chromosome 3, clone RP23-286J21, complete sequence Length = 192833 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 82 ggaggccctccttaagcag 100 ||||||||||||||||||| Sbjct: 137387 ggaggccctccttaagcag 137369
>gb|DQ185426.1| Rosa roxburghii clone C35 defense-related mRNA, partial sequence Length = 376 Score = 38.2 bits (19), Expect = 7.0 Identities = 31/35 (88%) Strand = Plus / Minus Query: 41 aagaagttcgagaccctgtcttacttgccaccact 75 |||||||||||||| ||||| ||| | |||||||| Sbjct: 127 aagaagttcgagactctgtcctaccttccaccact 93
>emb|X70355.1|TFRBC T.ferrooxidans genes rbcL and rbcS Length = 2209 Score = 38.2 bits (19), Expect = 7.0 Identities = 25/27 (92%) Strand = Plus / Plus Query: 43 gaagttcgagaccctgtcttacttgcc 69 |||||||||||| ||||||||| |||| Sbjct: 1703 gaagttcgagacactgtcttacctgcc 1729
>emb|AJ786661.1| Limonium gibertii mRNA for ribulose 1,5 bisphosphate carboxylase/oxygenase small subunit (rbcS2 gene) Length = 465 Score = 38.2 bits (19), Expect = 7.0 Identities = 43/51 (84%) Strand = Plus / Plus Query: 10 gtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtc 60 |||||||||||||||||| ||||| | ||||||||||||||| |||| Sbjct: 93 gtgcatgcaggtgtggccaccagagggtttgaagaagttcgagaccttgtc 143
>emb|AJ278756.1|AEV278756 Azoarcus evansii pac gene cluster for aerobic phenylacetate catabolism Length = 12666 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 122 aagtgggtgccttgcctcg 140 ||||||||||||||||||| Sbjct: 12109 aagtgggtgccttgcctcg 12091
>emb|AJ720990.1| Gallus gallus mRNA for hypothetical protein, clone 31p12 Length = 2197 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 74 ctcagcacggaggccctcc 92 ||||||||||||||||||| Sbjct: 1503 ctcagcacggaggccctcc 1521
>ref|NM_001007848.1| Gallus gallus Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1 (CBLL1), mRNA Length = 2197 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 74 ctcagcacggaggccctcc 92 ||||||||||||||||||| Sbjct: 1503 ctcagcacggaggccctcc 1521
>ref|NM_167358.1| Drosophila melanogaster Inositol 1,4,5-triphosphate kinase 2 CG1630-RB, transcript variant B (IP3K2), mRNA Length = 2816 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 28 catcgagggcatcaagaag 46 ||||||||||||||||||| Sbjct: 1769 catcgagggcatcaagaag 1787
>ref|NM_132647.1| Drosophila melanogaster Inositol 1,4,5-triphosphate kinase 2 CG1630-RA, transcript variant A (IP3K2), mRNA Length = 2695 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 28 catcgagggcatcaagaag 46 ||||||||||||||||||| Sbjct: 1648 catcgagggcatcaagaag 1666
>gb|AY084158.1| Drosophila melanogaster RE35745 full insert cDNA Length = 2694 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 28 catcgagggcatcaagaag 46 ||||||||||||||||||| Sbjct: 1648 catcgagggcatcaagaag 1666
>gb|AC001228.1|HSAC001228 244Kb Contig from Human Chromosome 11p15.5 spanning D11S1 through D11S25, complete sequence Length = 244254 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 12 gcatgcaggtgtggcccat 30 ||||||||||||||||||| Sbjct: 145102 gcatgcaggtgtggcccat 145084
>gb|AF307091.1|AF307091 Acidithiobacillus ferrooxidans ribulose bisphosphate carboxylase/oxygenase, large subunit (cbbL2), ribulose bisphosphate carboxylase/oxygenase, small subunit (cbbS2), and CbbQ (cbbQ) genes, complete cds Length = 2783 Score = 38.2 bits (19), Expect = 7.0 Identities = 25/27 (92%) Strand = Plus / Plus Query: 43 gaagttcgagaccctgtcttacttgcc 69 |||||||||||| ||||||||| |||| Sbjct: 1518 gaagttcgagacactgtcttacctgcc 1544
>gb|AC131971.9| Homo sapiens chromosome 11, clone CTC-343N3, complete sequence Length = 176226 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 12 gcatgcaggtgtggcccat 30 ||||||||||||||||||| Sbjct: 130575 gcatgcaggtgtggcccat 130593
>emb|Y00322.1|ZMRBCS Maize rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (EC 4.1.1.39) Length = 1648 Score = 38.2 bits (19), Expect = 7.0 Identities = 31/35 (88%) Strand = Plus / Plus Query: 35 ggcatcaagaagttcgagaccctgtcttacttgcc 69 |||| ||||||||||||||| ||||| ||| |||| Sbjct: 816 ggcaacaagaagttcgagacgctgtcgtacctgcc 850
>dbj|AK109003.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-H01, full insert sequence Length = 1188 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 30 tcgagggcatcaagaagtt 48 ||||||||||||||||||| Sbjct: 232 tcgagggcatcaagaagtt 250
>gb|M86717.1|SCFBCS1A Saccharum hybrid cultivar H32-8560 ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit gene, complete cds Length = 2328 Score = 38.2 bits (19), Expect = 7.0 Identities = 31/35 (88%) Strand = Plus / Plus Query: 35 ggcatcaagaagttcgagaccctgtcttacttgcc 69 |||| ||||||||||||||| ||||| ||| |||| Sbjct: 1426 ggcaacaagaagttcgagacgctgtcgtacctgcc 1460
>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome Length = 4096345 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 30 tcgagggcatcaagaagtt 48 ||||||||||||||||||| Sbjct: 3271259 tcgagggcatcaagaagtt 3271277
>gb|AC147596.5| Gallus gallus BAC clone CH261-29A2 from chromosome unknown, complete sequence Length = 190789 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 74 ctcagcacggaggccctcc 92 ||||||||||||||||||| Sbjct: 187999 ctcagcacggaggccctcc 188017
>gb|U51281.1|HSU51281 Human chromosome 11 cosmid cSRL-87f11 Length = 37972 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 12 gcatgcaggtgtggcccat 30 ||||||||||||||||||| Sbjct: 17862 gcatgcaggtgtggcccat 17880 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,169,498 Number of Sequences: 3902068 Number of extensions: 1169498 Number of successful extensions: 82722 Number of sequences better than 10.0: 162 Number of HSP's better than 10.0 without gapping: 157 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 82378 Number of HSP's gapped (non-prelim): 310 length of query: 146 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 125 effective length of database: 17,151,101,840 effective search space: 2143887730000 effective search space used: 2143887730000 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
