| Clone Name | basd19l13 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK071277.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023082M08, full insert sequence Length = 1609 Score = 613 bits (309), Expect = e-172 Identities = 489/548 (89%), Gaps = 2/548 (0%) Strand = Plus / Plus Query: 72 gccagatcgttgt--ttatgagctcgaaggagaagcccaccctcggaggccagcggatta 129 ||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 122 gccagatcgttgtgtttatgagctcgaaggagaagcccactcttggaggccagcggatta 181 Query: 130 agacccgcaagcggaatatagcagctcctttggatccttcgtcgttctctgatgcaattg 189 |||||||||| |||||||| || ||||||||||| ||| | || |||||||||||||||| Sbjct: 182 agacccgcaaacggaatattgctgctcctttggaccctgcatcattctctgatgcaattg 241 Query: 190 tccagatttatctggataatgctggagatctggaacttgttgccaaaagtatagagtcgt 249 |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| | Sbjct: 242 tccagatttatctggataatgctggagacctggaacttgttgccaaaagtatcgagtcct 301 Query: 250 cagatctcaacttctcacgttacggtgacaccttctttgaggttgttttcattggtgtgc 309 | |||||||||||||||||||||||||||||||| ||||||||||| |||||||| | || Sbjct: 302 cggatctcaacttctcacgttacggtgacaccttttttgaggttgtattcattggagggc 361 Query: 310 gtactcagcctggtacgattaaacccgaagaagagggagagcggcacccctattctctca 369 | ||||||||||| || || ||||| || ||||| |||||||| |||||||||||| | Sbjct: 362 gcactcagcctggcacaataaaacctgaggaagaaggagagcgtcacccctattctgtac 421 Query: 370 ttgactgttcagcacaacgtgaagcaatattaccttatgtcctctttattcagaaaacac 429 |||| ||| |||| || ||||||||||| || |||| ||| |||| |||||||||||| Sbjct: 422 ttgattgtgcagcgcagcgtgaagcaattttgccttctgttctctacattcagaaaacat 481 Query: 430 tgcgcaggaggcctttcttaataaagagtcttgaaaatgttatgcgaaaatttctccagt 489 ||||||||||||||||||| ||||||| |||||||||||||||||| ||||| || |||| Sbjct: 482 tgcgcaggaggcctttcttgataaagaatcttgaaaatgttatgcgcaaattccttcagt 541 Query: 490 ccttggagttctttgaagaaaatgagagacagaaacttgccattttcacggcacttgcat 549 | |||||||||| |||||||||||||| ||||||||||||||||||| |||||||| | Sbjct: 542 cactggagttcttcgaagaaaatgagaggaagaaacttgccattttcacagcacttgcct 601 Query: 550 tttctcagaaattatcaggtctgccacctgaaactgtctttcagccattgcttaaggaca 609 |||||||||| ||||||||||| ||||||||||||||||| |||||| |||| ||||| | Sbjct: 602 tttctcagaagttatcaggtcttccacctgaaactgtcttccagccactgctcaaggata 661 Query: 610 atcttgtt 617 |||||||| Sbjct: 662 atcttgtt 669
>gb|AY596583.1| Saccharum officinarum clone SCBGLR1003E06, complete sequence Length = 1627 Score = 500 bits (252), Expect = e-138 Identities = 473/546 (86%), Gaps = 3/546 (0%) Strand = Plus / Minus Query: 72 gccagatcgttgtttatgagctcgaaggagaagcccaccctcggaggccagcggattaag 131 |||||||||||||||||||||||||||||||||||||| || |||||| |||||||||| Sbjct: 1570 gccagatcgttgtttatgagctcgaaggagaagcccactcttggaggcacgcggattaag 1511 Query: 132 acccgcaagcggaatatagcagctcctttggatccttcgtcgttctctgatgcaattgtc 191 |||||||||||||| || |||||||||||||| ||| | || ||||||||||||||||| Sbjct: 1510 acccgcaagcggaacattgcagctcctttggaccctgcatcattctctgatgcaattgtt 1451 Query: 192 cagatttatctggataatgctggagatctggaacttgttgccaaaagtatagagtcgtca 251 ||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||| ||| Sbjct: 1450 cagatttatctggataatggtggagatctggaacttgtcgccaaaagtatcgagtcctca 1391 Query: 252 gatctcaacttctcacgttacggtgacaccttctttgaggttgttttcattggtgtgcgt 311 || |||||||||||||||||||||||||| || || ||||| ||||| |||| | ||| Sbjct: 1390 gacctcaacttctcacgttacggtgacacttttttcgaggtggtttttgttggagggcgc 1331 Query: 312 actcagcctggtacgattaaacccgaagaagagggagagcggcacccctattctctcatt 371 ||||||||||| || || ||||| |||||| ||||| || ||||| |||||| | | Sbjct: 1330 actcagcctggcactataaaacctgaagaa---ggagaccgccacccttattctgtgtta 1274 Query: 372 gactgttcagcacaacgtgaagcaatattaccttatgtcctctttattcagaaaacactg 431 || ||| ||||||| |||||| |||| || |||| || |||| ||| ||||||||| || Sbjct: 1273 gattgtgcagcacagcgtgaaacaattttgcctttcgtactctatatccagaaaacattg 1214 Query: 432 cgcaggaggcctttcttaataaagagtcttgaaaatgttatgcgaaaatttctccagtcc 491 ||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||| || Sbjct: 1213 cgcaggaggcctttcttaataaagaatcttgaaaatgttatgcgcaaattcctccaatct 1154 Query: 492 ttggagttctttgaagaaaatgagagacagaaacttgccattttcacggcacttgcattt 551 ||||||||||||||||||||||||||| ||||||| ||||| ||||| || ||||||||| Sbjct: 1153 ttggagttctttgaagaaaatgagagaaagaaactcgccatattcactgcccttgcattt 1094 Query: 552 tctcagaaattatcaggtctgccacctgaaactgtctttcagccattgcttaaggacaat 611 |||||||| ||||||| || || ||||| || || || |||||| |||| ||||| ||| Sbjct: 1093 tctcagaagctatcagggcttcctcctgagacagtgttccagccactgctcaaggataat 1034 Query: 612 cttgtt 617 |||||| Sbjct: 1033 cttgtt 1028
>gb|AY103565.1| Zea mays PCO067369 mRNA sequence Length = 1771 Score = 440 bits (222), Expect = e-120 Identities = 470/552 (85%), Gaps = 3/552 (0%) Strand = Plus / Plus Query: 62 tcctctccttgccagatcgttgtttatgagctcgaaggagaagcccaccctcggaggcca 121 |||||||| |||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 125 tcctctccgcgccagatcgttgtttatgagctcgaaggagaagcccactcttggaggcac 184 Query: 122 gcggattaagacccgcaagcggaatatagcagctcctttggatccttcgtcgttctctga 181 |||||||||||||||||||||||| || |||||||||||||| ||| | || |||||||| Sbjct: 185 gcggattaagacccgcaagcggaacattgcagctcctttggaccctgcatcattctctga 244 Query: 182 tgcaattgtccagatttatctggataatgctggagatctggaacttgttgccaaaagtat 241 ||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||||| Sbjct: 245 tgcaattgtccagatttatctggataatggtggagatctggaactcgtcgccaaaagtat 304 Query: 242 agagtcgtcagatctcaacttctcacgttacggtgacaccttctttgaggttgttttcat 301 ||||| || || ||||||||||||||||||||||||||||| |||||||| ||||| | Sbjct: 305 tgagtcttccgacctcaacttctcacgttacggtgacaccttttttgaggtggtttttgt 364 Query: 302 tggtgtgcgtactcagcctggtacgattaaacccgaagaagagggagagcggcaccccta 361 ||| | || ||||||||||| || | ||||| |||||| ||||| || ||||| || Sbjct: 365 tggaggacgcactcagcctggcactgtaaaacctgaagaa---ggagaccgccaccctta 421 Query: 362 ttctctcattgactgttcagcacaacgtgaagcaatattaccttatgtcctctttattca 421 |||| | | || ||| ||||| |||||| |||| || |||| || |||| ||| || Sbjct: 422 ttctatgttagattgtgtggcacagcgtgaaacaattttgcctttcgtactctatatcca 481 Query: 422 gaaaacactgcgcaggaggcctttcttaataaagagtcttgaaaatgttatgcgaaaatt 481 ||||||| ||||||||||||||||||||||||| | |||||||||||||||||| ||||| Sbjct: 482 gaaaacattgcgcaggaggcctttcttaataaaaaatcttgaaaatgttatgcgcaaatt 541 Query: 482 tctccagtccttggagttctttgaagaaaatgagagacagaaacttgccattttcacggc 541 ||||| ||||||||||||||||| ||||||||||| ||||||| ||||| ||||| || Sbjct: 542 cctccaatccttggagttctttgaggaaaatgagaggaagaaactcgccatattcacagc 601 Query: 542 acttgcattttctcagaaattatcaggtctgccacctgaaactgtctttcagccattgct 601 |||||||||||||| || | ||||| || || || || || || || ||||||||||| Sbjct: 602 ccttgcattttctcaaaagctgtcagggcttcctccggagacagtgttccagccattgct 661 Query: 602 taaggacaatct 613 ||||| ||||| Sbjct: 662 caaggataatct 673
>gb|AC148235.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone P0036H01, complete sequence Length = 182504 Score = 311 bits (157), Expect = 1e-81 Identities = 286/329 (86%) Strand = Plus / Plus Query: 289 aggttgttttcattggtgtgcgtactcagcctggtacgattaaacccgaagaagagggag 348 ||||||| |||||||| | ||| ||||||||||| || || ||||| || ||||| |||| Sbjct: 90027 aggttgtattcattggagggcgcactcagcctggcacaataaaacctgaggaagaaggag 90086 Query: 349 agcggcacccctattctctcattgactgttcagcacaacgtgaagcaatattaccttatg 408 |||| |||||||||||| | |||| ||| |||| || ||||||||||| || |||| || Sbjct: 90087 agcgtcacccctattctgtacttgattgtgcagcgcagcgtgaagcaattttgccttctg 90146 Query: 409 tcctctttattcagaaaacactgcgcaggaggcctttcttaataaagagtcttgaaaatg 468 | |||| |||||||||||| ||||||||||||||||||| ||||||| ||||||||||| Sbjct: 90147 ttctctacattcagaaaacattgcgcaggaggcctttcttgataaagaatcttgaaaatg 90206 Query: 469 ttatgcgaaaatttctccagtccttggagttctttgaagaaaatgagagacagaaacttg 528 ||||||| ||||| || ||||| |||||||||| |||||||||||||| ||||||||| Sbjct: 90207 ttatgcgcaaattccttcagtcactggagttcttcgaagaaaatgagaggaagaaacttg 90266 Query: 529 ccattttcacggcacttgcattttctcagaaattatcaggtctgccacctgaaactgtct 588 |||||||||| |||||||| ||||||||||| ||||||||||| |||||||||||||||| Sbjct: 90267 ccattttcacagcacttgccttttctcagaagttatcaggtcttccacctgaaactgtct 90326 Query: 589 ttcagccattgcttaaggacaatcttgtt 617 | |||||| |||| ||||| ||||||||| Sbjct: 90327 tccagccactgctcaaggataatcttgtt 90355 Score = 151 bits (76), Expect = 3e-33 Identities = 100/108 (92%) Strand = Plus / Plus Query: 115 gaggccagcggattaagacccgcaagcggaatatagcagctcctttggatccttcgtcgt 174 ||||||||||||||||||||||||| |||||||| || ||||||||||| ||| | || | Sbjct: 88708 gaggccagcggattaagacccgcaaacggaatattgctgctcctttggaccctgcatcat 88767 Query: 175 tctctgatgcaattgtccagatttatctggataatgctggagatctgg 222 ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 88768 tctctgatgcaattgtccagatttatctggataatgctggagacctgg 88815 Score = 111 bits (56), Expect = 3e-21 Identities = 68/72 (94%) Strand = Plus / Plus Query: 221 ggaacttgttgccaaaagtatagagtcgtcagatctcaacttctcacgttacggtgacac 280 ||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||| Sbjct: 89352 ggaacttgttgccaaaagtatcgagtcctcggatctcaacttctcacgttacggtgacac 89411 Query: 281 cttctttgaggt 292 ||| |||||||| Sbjct: 89412 cttttttgaggt 89423 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 agctcgaaggagaagcccac 109 |||||||||||||||||||| Sbjct: 87775 agctcgaaggagaagcccac 87794
>gb|AC148658.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0018P20 map near S6115, complete sequence Length = 139249 Score = 311 bits (157), Expect = 1e-81 Identities = 286/329 (86%) Strand = Plus / Minus Query: 289 aggttgttttcattggtgtgcgtactcagcctggtacgattaaacccgaagaagagggag 348 ||||||| |||||||| | ||| ||||||||||| || || ||||| || ||||| |||| Sbjct: 138671 aggttgtattcattggagggcgcactcagcctggcacaataaaacctgaggaagaaggag 138612 Query: 349 agcggcacccctattctctcattgactgttcagcacaacgtgaagcaatattaccttatg 408 |||| |||||||||||| | |||| ||| |||| || ||||||||||| || |||| || Sbjct: 138611 agcgtcacccctattctgtacttgattgtgcagcgcagcgtgaagcaattttgccttctg 138552 Query: 409 tcctctttattcagaaaacactgcgcaggaggcctttcttaataaagagtcttgaaaatg 468 | |||| |||||||||||| ||||||||||||||||||| ||||||| ||||||||||| Sbjct: 138551 ttctctacattcagaaaacattgcgcaggaggcctttcttgataaagaatcttgaaaatg 138492 Query: 469 ttatgcgaaaatttctccagtccttggagttctttgaagaaaatgagagacagaaacttg 528 ||||||| ||||| || ||||| |||||||||| |||||||||||||| ||||||||| Sbjct: 138491 ttatgcgcaaattccttcagtcactggagttcttcgaagaaaatgagaggaagaaacttg 138432 Query: 529 ccattttcacggcacttgcattttctcagaaattatcaggtctgccacctgaaactgtct 588 |||||||||| |||||||| ||||||||||| ||||||||||| |||||||||||||||| Sbjct: 138431 ccattttcacagcacttgccttttctcagaagttatcaggtcttccacctgaaactgtct 138372 Query: 589 ttcagccattgcttaaggacaatcttgtt 617 | |||||| |||| ||||| ||||||||| Sbjct: 138371 tccagccactgctcaaggataatcttgtt 138343
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 311 bits (157), Expect = 1e-81 Identities = 286/329 (86%) Strand = Plus / Minus Query: 289 aggttgttttcattggtgtgcgtactcagcctggtacgattaaacccgaagaagagggag 348 ||||||| |||||||| | ||| ||||||||||| || || ||||| || ||||| |||| Sbjct: 12078045 aggttgtattcattggagggcgcactcagcctggcacaataaaacctgaggaagaaggag 12077986 Query: 349 agcggcacccctattctctcattgactgttcagcacaacgtgaagcaatattaccttatg 408 |||| |||||||||||| | |||| ||| |||| || ||||||||||| || |||| || Sbjct: 12077985 agcgtcacccctattctgtacttgattgtgcagcgcagcgtgaagcaattttgccttctg 12077926 Query: 409 tcctctttattcagaaaacactgcgcaggaggcctttcttaataaagagtcttgaaaatg 468 | |||| |||||||||||| ||||||||||||||||||| ||||||| ||||||||||| Sbjct: 12077925 ttctctacattcagaaaacattgcgcaggaggcctttcttgataaagaatcttgaaaatg 12077866 Query: 469 ttatgcgaaaatttctccagtccttggagttctttgaagaaaatgagagacagaaacttg 528 ||||||| ||||| || ||||| |||||||||| |||||||||||||| ||||||||| Sbjct: 12077865 ttatgcgcaaattccttcagtcactggagttcttcgaagaaaatgagaggaagaaacttg 12077806 Query: 529 ccattttcacggcacttgcattttctcagaaattatcaggtctgccacctgaaactgtct 588 |||||||||| |||||||| ||||||||||| ||||||||||| |||||||||||||||| Sbjct: 12077805 ccattttcacagcacttgccttttctcagaagttatcaggtcttccacctgaaactgtct 12077746 Query: 589 ttcagccattgcttaaggacaatcttgtt 617 | |||||| |||| ||||| ||||||||| Sbjct: 12077745 tccagccactgctcaaggataatcttgtt 12077717 Score = 151 bits (76), Expect = 3e-33 Identities = 100/108 (92%) Strand = Plus / Minus Query: 115 gaggccagcggattaagacccgcaagcggaatatagcagctcctttggatccttcgtcgt 174 ||||||||||||||||||||||||| |||||||| || ||||||||||| ||| | || | Sbjct: 12079364 gaggccagcggattaagacccgcaaacggaatattgctgctcctttggaccctgcatcat 12079305 Query: 175 tctctgatgcaattgtccagatttatctggataatgctggagatctgg 222 ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 12079304 tctctgatgcaattgtccagatttatctggataatgctggagacctgg 12079257 Score = 111 bits (56), Expect = 3e-21 Identities = 68/72 (94%) Strand = Plus / Minus Query: 221 ggaacttgttgccaaaagtatagagtcgtcagatctcaacttctcacgttacggtgacac 280 ||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||| Sbjct: 12078720 ggaacttgttgccaaaagtatcgagtcctcggatctcaacttctcacgttacggtgacac 12078661 Query: 281 cttctttgaggt 292 ||| |||||||| Sbjct: 12078660 cttttttgaggt 12078649 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 agctcgaaggagaagcccac 109 |||||||||||||||||||| Sbjct: 12080297 agctcgaaggagaagcccac 12080278
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 311 bits (157), Expect = 1e-81 Identities = 286/329 (86%) Strand = Plus / Minus Query: 289 aggttgttttcattggtgtgcgtactcagcctggtacgattaaacccgaagaagagggag 348 ||||||| |||||||| | ||| ||||||||||| || || ||||| || ||||| |||| Sbjct: 12157352 aggttgtattcattggagggcgcactcagcctggcacaataaaacctgaggaagaaggag 12157293 Query: 349 agcggcacccctattctctcattgactgttcagcacaacgtgaagcaatattaccttatg 408 |||| |||||||||||| | |||| ||| |||| || ||||||||||| || |||| || Sbjct: 12157292 agcgtcacccctattctgtacttgattgtgcagcgcagcgtgaagcaattttgccttctg 12157233 Query: 409 tcctctttattcagaaaacactgcgcaggaggcctttcttaataaagagtcttgaaaatg 468 | |||| |||||||||||| ||||||||||||||||||| ||||||| ||||||||||| Sbjct: 12157232 ttctctacattcagaaaacattgcgcaggaggcctttcttgataaagaatcttgaaaatg 12157173 Query: 469 ttatgcgaaaatttctccagtccttggagttctttgaagaaaatgagagacagaaacttg 528 ||||||| ||||| || ||||| |||||||||| |||||||||||||| ||||||||| Sbjct: 12157172 ttatgcgcaaattccttcagtcactggagttcttcgaagaaaatgagaggaagaaacttg 12157113 Query: 529 ccattttcacggcacttgcattttctcagaaattatcaggtctgccacctgaaactgtct 588 |||||||||| |||||||| ||||||||||| ||||||||||| |||||||||||||||| Sbjct: 12157112 ccattttcacagcacttgccttttctcagaagttatcaggtcttccacctgaaactgtct 12157053 Query: 589 ttcagccattgcttaaggacaatcttgtt 617 | |||||| |||| ||||| ||||||||| Sbjct: 12157052 tccagccactgctcaaggataatcttgtt 12157024 Score = 151 bits (76), Expect = 3e-33 Identities = 100/108 (92%) Strand = Plus / Minus Query: 115 gaggccagcggattaagacccgcaagcggaatatagcagctcctttggatccttcgtcgt 174 ||||||||||||||||||||||||| |||||||| || ||||||||||| ||| | || | Sbjct: 12158671 gaggccagcggattaagacccgcaaacggaatattgctgctcctttggaccctgcatcat 12158612 Query: 175 tctctgatgcaattgtccagatttatctggataatgctggagatctgg 222 ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 12158611 tctctgatgcaattgtccagatttatctggataatgctggagacctgg 12158564 Score = 111 bits (56), Expect = 3e-21 Identities = 68/72 (94%) Strand = Plus / Minus Query: 221 ggaacttgttgccaaaagtatagagtcgtcagatctcaacttctcacgttacggtgacac 280 ||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||| Sbjct: 12158027 ggaacttgttgccaaaagtatcgagtcctcggatctcaacttctcacgttacggtgacac 12157968 Query: 281 cttctttgaggt 292 ||| |||||||| Sbjct: 12157967 cttttttgaggt 12157956 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 agctcgaaggagaagcccac 109 |||||||||||||||||||| Sbjct: 12159604 agctcgaaggagaagcccac 12159585
>ref|NM_105195.2| Arabidopsis thaliana translation initiation factor AT1G65220 mRNA, complete cds Length = 1500 Score = 186 bits (94), Expect = 6e-44 Identities = 190/222 (85%) Strand = Plus / Plus Query: 83 gtttatgagctcgaaggagaagcccaccctcggaggccagcggattaagacccgcaagcg 142 |||||||||||| |||||||||||||| |||||||| |||||||||||||||||| | Sbjct: 90 gtttatgagctcaaaggagaagcccactctcggaggtacgcggattaagacccgcaaaag 149 Query: 143 gaatatagcagctcctttggatccttcgtcgttctctgatgcaattgtccagatttatct 202 |||||| || |||||| | || ||| | | || ||||||||| | || ||||||||||| Sbjct: 150 gaatattgctgctcctctcgaccctgctgctttttctgatgcactagttcagatttatct 209 Query: 203 ggataatgctggagatctggaacttgttgccaaaagtatagagtcgtcagatctcaactt 262 |||||||||||| ||||||||||||||||||| |||| ||||||| || ||||| || || Sbjct: 210 ggataatgctggtgatctggaacttgttgccagaagtttagagtcatctgatcttaattt 269 Query: 263 ctcacgttacggtgacaccttctttgaggttgttttcattgg 304 |||| | |||||||| | ||||||||||||||||||||||| Sbjct: 270 ctcaagatacggtgatattttctttgaggttgttttcattgg 311 Score = 58.0 bits (29), Expect = 4e-05 Identities = 95/117 (81%) Strand = Plus / Plus Query: 501 tttgaagaaaatgagagacagaaacttgccattttcacggcacttgcattttctcagaaa 560 ||||| || |||||||| |||| ||||| || ||||| |||||||||||||| ||||| Sbjct: 505 tttgaggagaatgagaggaagaagcttgcaatattcacagcacttgcattttcacagaag 564 Query: 561 ttatcaggtctgccacctgaaactgtctttcagccattgcttaaggacaatcttgtt 617 | ||||| | || | || |||||||| ||||||||||||||||| | ||||||| Sbjct: 565 ctctcaggattacctgcagagactgtcttccagccattgcttaaggatactcttgtt 621
>gb|AY056181.1| Arabidopsis thaliana unknown protein (At1g65220) mRNA, complete cds Length = 1477 Score = 186 bits (94), Expect = 6e-44 Identities = 190/222 (85%) Strand = Plus / Plus Query: 83 gtttatgagctcgaaggagaagcccaccctcggaggccagcggattaagacccgcaagcg 142 |||||||||||| |||||||||||||| |||||||| |||||||||||||||||| | Sbjct: 67 gtttatgagctcaaaggagaagcccactctcggaggtacgcggattaagacccgcaaaag 126 Query: 143 gaatatagcagctcctttggatccttcgtcgttctctgatgcaattgtccagatttatct 202 |||||| || |||||| | || ||| | | || ||||||||| | || ||||||||||| Sbjct: 127 gaatattgctgctcctctcgaccctgctgctttttctgatgcactagttcagatttatct 186 Query: 203 ggataatgctggagatctggaacttgttgccaaaagtatagagtcgtcagatctcaactt 262 |||||||||||| ||||||||||||||||||| |||| ||||||| || ||||| || || Sbjct: 187 ggataatgctggtgatctggaacttgttgccagaagtttagagtcatctgatcttaattt 246 Query: 263 ctcacgttacggtgacaccttctttgaggttgttttcattgg 304 |||| | |||||||| | ||||||||||||||||||||||| Sbjct: 247 ctcaagatacggtgatattttctttgaggttgttttcattgg 288 Score = 58.0 bits (29), Expect = 4e-05 Identities = 95/117 (81%) Strand = Plus / Plus Query: 501 tttgaagaaaatgagagacagaaacttgccattttcacggcacttgcattttctcagaaa 560 ||||| || |||||||| |||| ||||| || ||||| |||||||||||||| ||||| Sbjct: 482 tttgaggagaatgagaggaagaagcttgcaatattcacagcacttgcattttcacagaag 541 Query: 561 ttatcaggtctgccacctgaaactgtctttcagccattgcttaaggacaatcttgtt 617 | ||||| | || | || |||||||| ||||||||||||||||| | ||||||| Sbjct: 542 ctctcaggattacctgcagagactgtcttccagccattgcttaaggatactcttgtt 598
>gb|BT006174.1| Arabidopsis thaliana clone RAFL09-89-P13 (R20012) unknown protein (At1g65220) mRNA, complete cds Length = 1469 Score = 186 bits (94), Expect = 6e-44 Identities = 190/222 (85%) Strand = Plus / Plus Query: 83 gtttatgagctcgaaggagaagcccaccctcggaggccagcggattaagacccgcaagcg 142 |||||||||||| |||||||||||||| |||||||| |||||||||||||||||| | Sbjct: 67 gtttatgagctcaaaggagaagcccactctcggaggtacgcggattaagacccgcaaaag 126 Query: 143 gaatatagcagctcctttggatccttcgtcgttctctgatgcaattgtccagatttatct 202 |||||| || |||||| | || ||| | | || ||||||||| | || ||||||||||| Sbjct: 127 gaatattgctgctcctctcgaccctgctgctttttctgatgcactagttcagatttatct 186 Query: 203 ggataatgctggagatctggaacttgttgccaaaagtatagagtcgtcagatctcaactt 262 |||||||||||| ||||||||||||||||||| |||| ||||||| || ||||| || || Sbjct: 187 ggataatgctggtgatctggaacttgttgccagaagtttagagtcatctgatcttaattt 246 Query: 263 ctcacgttacggtgacaccttctttgaggttgttttcattgg 304 |||| | |||||||| | ||||||||||||||||||||||| Sbjct: 247 ctcaagatacggtgatattttctttgaggttgttttcattgg 288 Score = 58.0 bits (29), Expect = 4e-05 Identities = 95/117 (81%) Strand = Plus / Plus Query: 501 tttgaagaaaatgagagacagaaacttgccattttcacggcacttgcattttctcagaaa 560 ||||| || |||||||| |||| ||||| || ||||| |||||||||||||| ||||| Sbjct: 482 tttgaggagaatgagaggaagaagcttgcaatattcacagcacttgcattttcacagaag 541 Query: 561 ttatcaggtctgccacctgaaactgtctttcagccattgcttaaggacaatcttgtt 617 | ||||| | || | || |||||||| ||||||||||||||||| | ||||||| Sbjct: 542 ctctcaggattacctgcagagactgtcttccagccattgcttaaggatactcttgtt 598
>emb|BX814895.1|CNS0AEMB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS17ZA05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1437 Score = 186 bits (94), Expect = 6e-44 Identities = 190/222 (85%) Strand = Plus / Plus Query: 83 gtttatgagctcgaaggagaagcccaccctcggaggccagcggattaagacccgcaagcg 142 |||||||||||| |||||||||||||| |||||||| |||||||||||||||||| | Sbjct: 65 gtttatgagctcaaaggagaagcccactctcggaggtacgcggattaagacccgcaaaag 124 Query: 143 gaatatagcagctcctttggatccttcgtcgttctctgatgcaattgtccagatttatct 202 |||||| || |||||| | || ||| | | || ||||||||| | || ||||||||||| Sbjct: 125 gaatattgctgctcctctcgaccctgctgctttttctgatgcactagttcagatttatct 184 Query: 203 ggataatgctggagatctggaacttgttgccaaaagtatagagtcgtcagatctcaactt 262 |||||||||||| ||||||||||||||||||| |||| ||||||| || ||||| || || Sbjct: 185 ggataatgctggtgatctggaacttgttgccagaagtttagagtcatctgatcttaattt 244 Query: 263 ctcacgttacggtgacaccttctttgaggttgttttcattgg 304 |||| | |||||||| | ||||||||||||||||||||||| Sbjct: 245 ctcaagatacggtgatattttctttgaggttgttttcattgg 286
>gb|AY086089.1| Arabidopsis thaliana clone 21223 mRNA, complete sequence Length = 1456 Score = 186 bits (94), Expect = 6e-44 Identities = 190/222 (85%) Strand = Plus / Plus Query: 83 gtttatgagctcgaaggagaagcccaccctcggaggccagcggattaagacccgcaagcg 142 |||||||||||| |||||||||||||| |||||||| |||||||||||||||||| | Sbjct: 65 gtttatgagctcaaaggagaagcccactctcggaggtacgcggattaagacccgcaaaag 124 Query: 143 gaatatagcagctcctttggatccttcgtcgttctctgatgcaattgtccagatttatct 202 |||||| || |||||| | || ||| | | || ||||||||| | || ||||||||||| Sbjct: 125 gaatattgctgctcctctcgaccctgctgctttttctgatgcactagttcagatttatct 184 Query: 203 ggataatgctggagatctggaacttgttgccaaaagtatagagtcgtcagatctcaactt 262 |||||||||||| ||||||||||||||||||| |||| ||||||| || ||||| || || Sbjct: 185 ggataatgctggtgatctggaacttgttgccagaagtttagagtcatctgatcttaattt 244 Query: 263 ctcacgttacggtgacaccttctttgaggttgttttcattgg 304 |||| | |||||||| | ||||||||||||||||||||||| Sbjct: 245 ctcaagatacggtgatattttctttgaggttgttttcattgg 286 Score = 58.0 bits (29), Expect = 4e-05 Identities = 95/117 (81%) Strand = Plus / Plus Query: 501 tttgaagaaaatgagagacagaaacttgccattttcacggcacttgcattttctcagaaa 560 ||||| || |||||||| |||| ||||| || ||||| |||||||||||||| ||||| Sbjct: 480 tttgaggagaatgagaggaagaagcttgcaatattcacagcacttgcattttcacagaag 539 Query: 561 ttatcaggtctgccacctgaaactgtctttcagccattgcttaaggacaatcttgtt 617 | ||||| | || | || |||||||| ||||||||||||||||| | ||||||| Sbjct: 540 ctctcaggattacctgcagagactgtcttccagccattgcttaaggatactcttgtt 596
>ref|NM_123014.2| Arabidopsis thaliana translation initiation factor AT5G36230 mRNA, complete cds Length = 1600 Score = 180 bits (91), Expect = 4e-42 Identities = 187/219 (85%) Strand = Plus / Plus Query: 83 gtttatgagctcgaaggagaagcccaccctcggaggccagcggattaagacccgcaagcg 142 ||||||||||||||||||||| ||||| |||||||| |||||||||||||||||| || Sbjct: 132 gtttatgagctcgaaggagaaacccactctcggaggtacgcggattaagacccgcaaacg 191 Query: 143 gaatatagcagctcctttggatccttcgtcgttctctgatgcaattgtccagatttatct 202 |||||| || |||||| |||| ||| | | || ||||||||| | ||||||||||| | Sbjct: 192 gaatattgctgctcctctggaccctgcagccttttctgatgcagtggtccagatttacca 251 Query: 203 ggataatgctggagatctggaacttgttgccaaaagtatagagtcgtcagatctcaactt 262 ||||||||||| |||||||||||||||||||||||||| ||||| ||||| || || || Sbjct: 252 tgataatgctggtgatctggaacttgttgccaaaagtattgagtcatcagaccttaattt 311 Query: 263 ctcacgttacggtgacaccttctttgaggttgttttcat 301 | || | || ||||||| ||||||||||||| ||||||| Sbjct: 312 cacaagatatggtgacatcttctttgaggttattttcat 350 Score = 83.8 bits (42), Expect = 6e-13 Identities = 159/198 (80%) Strand = Plus / Plus Query: 420 cagaaaacactgcgcaggaggcctttcttaataaagagtcttgaaaatgttatgcgaaaa 479 ||||||| ||||| |||| ||||||| | ||||||| ||||||||||||| || | | Sbjct: 466 cagaaaattctgcgtaggaagcctttcctcataaagaaccttgaaaatgttactcggaga 525 Query: 480 tttctccagtccttggagttctttgaagaaaatgagagacagaaacttgccattttcacg 539 || || ||||| ||||| | ||||| |||||||| || |||| ||||| || ||||| Sbjct: 526 ttcctgcagtcactggagctttttgaggaaaatgaaaggaagaagcttgctatcttcaca 585 Query: 540 gcacttgcattttctcagaaattatcaggtctgccacctgaaactgtctttcagccattg 599 |||||||| ||||| ||||| | ||||| | || || ||||||||||| ||||||||| Sbjct: 586 gcacttgccttttcccagaagctctcaggattacctccggaaactgtcttccagccattg 645 Query: 600 cttaaggacaatcttgtt 617 || ||||| ||||||||| Sbjct: 646 ctcaaggataatcttgtt 663
>gb|AY136473.1| Arabidopsis thaliana putative protein (At5g36230) mRNA, complete cds Length = 1594 Score = 180 bits (91), Expect = 4e-42 Identities = 187/219 (85%) Strand = Plus / Plus Query: 83 gtttatgagctcgaaggagaagcccaccctcggaggccagcggattaagacccgcaagcg 142 ||||||||||||||||||||| ||||| |||||||| |||||||||||||||||| || Sbjct: 128 gtttatgagctcgaaggagaaacccactctcggaggtacgcggattaagacccgcaaacg 187 Query: 143 gaatatagcagctcctttggatccttcgtcgttctctgatgcaattgtccagatttatct 202 |||||| || |||||| |||| ||| | | || ||||||||| | ||||||||||| | Sbjct: 188 gaatattgctgctcctctggaccctgcagccttttctgatgcagtggtccagatttacca 247 Query: 203 ggataatgctggagatctggaacttgttgccaaaagtatagagtcgtcagatctcaactt 262 ||||||||||| |||||||||||||||||||||||||| ||||| ||||| || || || Sbjct: 248 tgataatgctggtgatctggaacttgttgccaaaagtattgagtcatcagaccttaattt 307 Query: 263 ctcacgttacggtgacaccttctttgaggttgttttcat 301 | || | || ||||||| ||||||||||||| ||||||| Sbjct: 308 cacaagatatggtgacatcttctttgaggttattttcat 346 Score = 83.8 bits (42), Expect = 6e-13 Identities = 159/198 (80%) Strand = Plus / Plus Query: 420 cagaaaacactgcgcaggaggcctttcttaataaagagtcttgaaaatgttatgcgaaaa 479 ||||||| ||||| |||| ||||||| | ||||||| ||||||||||||| || | | Sbjct: 462 cagaaaattctgcgtaggaagcctttcctcataaagaaccttgaaaatgttactcggaga 521 Query: 480 tttctccagtccttggagttctttgaagaaaatgagagacagaaacttgccattttcacg 539 || || ||||| ||||| | ||||| |||||||| || |||| ||||| || ||||| Sbjct: 522 ttcctgcagtcactggagctttttgaggaaaatgaaaggaagaagcttgctatcttcaca 581 Query: 540 gcacttgcattttctcagaaattatcaggtctgccacctgaaactgtctttcagccattg 599 |||||||| ||||| ||||| | ||||| | || || ||||||||||| ||||||||| Sbjct: 582 gcacttgccttttcccagaagctctcaggattacctccggaaactgtcttccagccattg 641 Query: 600 cttaaggacaatcttgtt 617 || ||||| ||||||||| Sbjct: 642 ctcaaggataatcttgtt 659
>gb|AY057642.1| Arabidopsis thaliana AT5g36230/T30G6_9 mRNA, complete cds Length = 1611 Score = 180 bits (91), Expect = 4e-42 Identities = 187/219 (85%) Strand = Plus / Plus Query: 83 gtttatgagctcgaaggagaagcccaccctcggaggccagcggattaagacccgcaagcg 142 ||||||||||||||||||||| ||||| |||||||| |||||||||||||||||| || Sbjct: 131 gtttatgagctcgaaggagaaacccactctcggaggtacgcggattaagacccgcaaacg 190 Query: 143 gaatatagcagctcctttggatccttcgtcgttctctgatgcaattgtccagatttatct 202 |||||| || |||||| |||| ||| | | || ||||||||| | ||||||||||| | Sbjct: 191 gaatattgctgctcctctggaccctgcagccttttctgatgcagtggtccagatttacca 250 Query: 203 ggataatgctggagatctggaacttgttgccaaaagtatagagtcgtcagatctcaactt 262 ||||||||||| |||||||||||||||||||||||||| ||||| ||||| || || || Sbjct: 251 tgataatgctggtgatctggaacttgttgccaaaagtattgagtcatcagaccttaattt 310 Query: 263 ctcacgttacggtgacaccttctttgaggttgttttcat 301 | || | || ||||||| ||||||||||||| ||||||| Sbjct: 311 cacaagatatggtgacatcttctttgaggttattttcat 349 Score = 83.8 bits (42), Expect = 6e-13 Identities = 159/198 (80%) Strand = Plus / Plus Query: 420 cagaaaacactgcgcaggaggcctttcttaataaagagtcttgaaaatgttatgcgaaaa 479 ||||||| ||||| |||| ||||||| | ||||||| ||||||||||||| || | | Sbjct: 465 cagaaaattctgcgtaggaagcctttcctcataaagaaccttgaaaatgttactcggaga 524 Query: 480 tttctccagtccttggagttctttgaagaaaatgagagacagaaacttgccattttcacg 539 || || ||||| ||||| | ||||| |||||||| || |||| ||||| || ||||| Sbjct: 525 ttcctgcagtcactggagctttttgaggaaaatgaaaggaagaagcttgctatcttcaca 584 Query: 540 gcacttgcattttctcagaaattatcaggtctgccacctgaaactgtctttcagccattg 599 |||||||| ||||| ||||| | ||||| | || || ||||||||||| ||||||||| Sbjct: 585 gcacttgccttttcccagaagctctcaggattacctccggaaactgtcttccagccattg 644 Query: 600 cttaaggacaatcttgtt 617 || ||||| ||||||||| Sbjct: 645 ctcaaggataatcttgtt 662
>dbj|AB026661.1| Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:T30G6 Length = 76994 Score = 83.8 bits (42), Expect = 6e-13 Identities = 159/198 (80%) Strand = Plus / Plus Query: 420 cagaaaacactgcgcaggaggcctttcttaataaagagtcttgaaaatgttatgcgaaaa 479 ||||||| ||||| |||| ||||||| | ||||||| ||||||||||||| || | | Sbjct: 29662 cagaaaattctgcgtaggaagcctttcctcataaagaaccttgaaaatgttactcggaga 29721 Query: 480 tttctccagtccttggagttctttgaagaaaatgagagacagaaacttgccattttcacg 539 || || ||||| ||||| | ||||| |||||||| || |||| ||||| || ||||| Sbjct: 29722 ttcctgcagtcactggagctttttgaggaaaatgaaaggaagaagcttgctatcttcaca 29781 Query: 540 gcacttgcattttctcagaaattatcaggtctgccacctgaaactgtctttcagccattg 599 |||||||| ||||| ||||| | ||||| | || || ||||||||||| ||||||||| Sbjct: 29782 gcacttgccttttcccagaagctctcaggattacctccggaaactgtcttccagccattg 29841 Query: 600 cttaaggacaatcttgtt 617 || ||||| ||||||||| Sbjct: 29842 ctcaaggataatcttgtt 29859 Score = 73.8 bits (37), Expect = 6e-10 Identities = 85/101 (84%) Strand = Plus / Plus Query: 122 gcggattaagacccgcaagcggaatatagcagctcctttggatccttcgtcgttctctga 181 |||||||||||||||||| |||||||| || |||||| |||| ||| | | || ||||| Sbjct: 28730 gcggattaagacccgcaaacggaatattgctgctcctctggaccctgcagccttttctga 28789 Query: 182 tgcaattgtccagatttatctggataatgctggagatctgg 222 |||| | ||||||||||| | ||||||||||| ||||||| Sbjct: 28790 tgcagtggtccagatttaccatgataatgctggtgatctgg 28830 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 221 ggaacttgttgccaaaagtatagagtcgtcagatctcaacttctcacgttacggtgacac 280 ||||||||||||||||||||| ||||| ||||| || || ||| || | || ||||||| Sbjct: 28919 ggaacttgttgccaaaagtattgagtcatcagaccttaatttcacaagatatggtgacat 28978 Query: 281 cttctttgaggt 292 |||||||||||| Sbjct: 28979 cttctttgaggt 28990
>gb|AC007230.2|T23K8 Arabidopsis thaliana chromosome 1 BAC T23K8 sequence, complete sequence Length = 53090 Score = 75.8 bits (38), Expect = 2e-10 Identities = 89/106 (83%) Strand = Plus / Plus Query: 122 gcggattaagacccgcaagcggaatatagcagctcctttggatccttcgtcgttctctga 181 |||||||||||||||||| ||||||| || |||||| | || ||| | | || ||||| Sbjct: 45804 gcggattaagacccgcaaaaggaatattgctgctcctctcgaccctgctgctttttctga 45863 Query: 182 tgcaattgtccagatttatctggataatgctggagatctggaactt 227 |||| | || ||||||||||||||||||||||| ||||||| |||| Sbjct: 45864 tgcactagttcagatttatctggataatgctggtgatctggtactt 45909 Score = 58.0 bits (29), Expect = 4e-05 Identities = 95/117 (81%) Strand = Plus / Plus Query: 501 tttgaagaaaatgagagacagaaacttgccattttcacggcacttgcattttctcagaaa 560 ||||| || |||||||| |||| ||||| || ||||| |||||||||||||| ||||| Sbjct: 46419 tttgaggagaatgagaggaagaagcttgcaatattcacagcacttgcattttcacagaag 46478 Query: 561 ttatcaggtctgccacctgaaactgtctttcagccattgcttaaggacaatcttgtt 617 | ||||| | || | || |||||||| ||||||||||||||||| | ||||||| Sbjct: 46479 ctctcaggattacctgcagagactgtcttccagccattgcttaaggatactcttgtt 46535 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 221 ggaacttgttgccaaaagtatagagtcgtcagatctcaacttctcacgttacggtgacac 280 |||||||||||||| |||| ||||||| || ||||| || |||||| | |||||||| | Sbjct: 46004 ggaacttgttgccagaagtttagagtcatctgatcttaatttctcaagatacggtgatat 46063 Query: 281 cttctttgaggt 292 ||||||||||| Sbjct: 46064 tttctttgaggt 46075
>gb|AC148171.16| Medicago truncatula clone mth2-30a2, complete sequence Length = 158384 Score = 63.9 bits (32), Expect = 6e-07 Identities = 104/128 (81%) Strand = Plus / Minus Query: 459 cttgaaaatgttatgcgaaaatttctccagtccttggagttctttgaagaaaatgagaga 518 ||||||||||| ||||||| ||| ||||||||||||||| | || || ||||||||||| Sbjct: 57031 cttgaaaatgtcatgcgaagattcctccagtccttggagcttttcgaggaaaatgagagg 56972 Query: 519 cagaaacttgccattttcacggcacttgcattttctcagaaattatcaggtctgccacct 578 |||| | || || ||||| ||||| || || |||||||| |||| ||||| ||||| Sbjct: 56971 aagaagttggcaatcttcacagcactcgctttctctcagaagctatctggtctcccacca 56912 Query: 579 gaaactgt 586 || ||||| Sbjct: 56911 gagactgt 56904 Score = 50.1 bits (25), Expect = 0.009 Identities = 76/93 (81%) Strand = Plus / Minus Query: 122 gcggattaagacccgcaagcggaatatagcagctcctttggatccttcgtcgttctctga 181 |||||||||||||||||| ||||| || || || ||| |||| ||| | | || |||| Sbjct: 58057 gcggattaagacccgcaaacggaacatcgcggcgcctctggaccctgcagcatttgctga 57998 Query: 182 tgcaattgtccagatttatctggataatgctgg 214 |||| | ||||||||||| ||||||||||||| Sbjct: 57997 tgcagtggtccagatttacttggataatgctgg 57965 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Minus Query: 221 ggaacttgttgccaaaagtatagagtcgtcagatctcaacttctcacgttacggtgacac 280 ||||||| |||| ||||| || || || || || ||||| |||||| | ||||||||||| Sbjct: 57849 ggaacttattgcaaaaagcattgaatcttctgacctcaatttctcaagatacggtgacac 57790 Query: 281 cttctttgagg 291 ||| ||||||| Sbjct: 57789 cttttttgagg 57779
>ref|XM_676701.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN8524.2), mRNA Length = 2067 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 42 gccacgatctccttcacctctc 63 |||||||||||||||||||||| Sbjct: 918 gccacgatctccttcacctctc 897
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 ttaagacccgcaagcggaata 147 ||||||||||||||||||||| Sbjct: 1871901 ttaagacccgcaagcggaata 1871921
>gb|AY805220.1| Homo sapiens paraoxonase 3 (PON3) gene, complete cds Length = 76547 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 505 aagaaaatgagagacagaaac 525 ||||||||||||||||||||| Sbjct: 48992 aagaaaatgagagacagaaac 49012
>gb|AC146485.2| Xenopus tropicalis clone CH216-8M11, complete sequence Length = 191742 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 cttcacctctcctctccttgc 73 ||||||||||||||||||||| Sbjct: 144997 cttcacctctcctctccttgc 144977
>gb|AE006246.1| Lactococcus lactis subsp. lactis IL1403 section 8 of 218 of the complete genome Length = 11010 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 280 ccttctttgaggttgttttca 300 ||||||||||||||||||||| Sbjct: 9564 ccttctttgaggttgttttca 9544
>gb|AC145888.3| Pan troglodytes BAC clone RP43-40H8 from 7, complete sequence Length = 163342 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 505 aagaaaatgagagacagaaac 525 ||||||||||||||||||||| Sbjct: 78644 aagaaaatgagagacagaaac 78664
>gb|AC004022.1| Homo sapiens BAC clone GS1-155M11 from 7, complete sequence Length = 116552 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 505 aagaaaatgagagacagaaac 525 ||||||||||||||||||||| Sbjct: 98609 aagaaaatgagagacagaaac 98589
>emb|AL607028.14| Human DNA sequence from clone RP11-25G10 on chromosome 10 Contains part of the gene for a novel protein (LOC221061) and a novel gene, complete sequence Length = 118158 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 418 ttcagaaaacactgcgcagga 438 ||||||||||||||||||||| Sbjct: 114640 ttcagaaaacactgcgcagga 114660
>emb|AL451125.7| Human DNA sequence from clone RP11-474P12 on chromosome 9 Contains the 5' end of the GOLGA1 gene for golgi autoantigen (golgin subfamily a, 1), the 3' end of a novel gene, a Friedreich ataxia (FRDA) pseudogene, and one CpG island, complete sequence Length = 129272 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 atctccttcacctctcctctc 68 ||||||||||||||||||||| Sbjct: 47382 atctccttcacctctcctctc 47362
>gb|AC121799.5| Mus musculus BAC clone RP23-429M22 from chromosome 1, complete sequence Length = 212595 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 502 ttgaagaaaatgagagacaga 522 ||||||||||||||||||||| Sbjct: 44102 ttgaagaaaatgagagacaga 44122
>gb|DQ334278.1| Tupaia minor clone JS132 microsatellite sequence Length = 509 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 513 gagagacagaaacttgccatt 533 ||||||||||||||||||||| Sbjct: 174 gagagacagaaacttgccatt 154
>gb|AC172026.3| Gallus gallus BAC clone CH261-126J23 from chromosome ul, complete sequence Length = 179661 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 52 ccttcacctctcctctccttgccag 76 |||||||||||||| |||||||||| Sbjct: 84336 ccttcacctctcctttccttgccag 84360
>gb|AC154815.2| Mus musculus BAC clone RP24-534C22 from chromosome 9, complete sequence Length = 173315 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 ctccttcacctctcctctcc 69 |||||||||||||||||||| Sbjct: 85229 ctccttcacctctcctctcc 85210
>gb|AF168099.1| Tauraco persa cytochrome oxidase III gene, partial cds; mitochondrial gene for mitochondrial product Length = 783 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 ctcacgttacggtgacacct 282 |||||||||||||||||||| Sbjct: 439 ctcacgttacggtgacacct 420
>gb|AC117547.19| Mus musculus chromosome 1, clone RP23-221M20, complete sequence Length = 195598 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 tccttcacctctcctctcct 70 |||||||||||||||||||| Sbjct: 14120 tccttcacctctcctctcct 14101
>emb|CR847981.15| Zebrafish DNA sequence from clone CH211-195H23 in linkage group 15, complete sequence Length = 197506 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 453 aagagtcttgaaaatgttat 472 |||||||||||||||||||| Sbjct: 93658 aagagtcttgaaaatgttat 93677
>gb|BC042536.1| Homo sapiens retinal G protein coupled receptor, mRNA (cDNA clone IMAGE:4941180), partial cds Length = 3712 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 acctctcctctccttgccag 76 |||||||||||||||||||| Sbjct: 174 acctctcctctccttgccag 155
>emb|AL583838.7| Human DNA sequence from clone RP11-536O4 on chromosome 6, complete sequence Length = 121958 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 544 ttgcattttctcagaaatta 563 |||||||||||||||||||| Sbjct: 96779 ttgcattttctcagaaatta 96760
>emb|AL031056.1|HS111D6 Human DNA sequence from clone RP1-111D6 on chromosome 6q24-25.2 Contains a pseudogene similar to peripheral myelin protein 2 (M-FABP) (PMP2)(P2, MP2, FABP8) and two novel genes, complete sequence Length = 128330 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 tgaagaaaatgagagacaga 522 |||||||||||||||||||| Sbjct: 100046 tgaagaaaatgagagacaga 100027
>emb|AL954346.7| Mouse DNA sequence from clone RP23-298H6 on chromosome 11 Contains part of a novel gene, the Efemp1 gene for epidermal growth factor-containing fibulin-like extracellular matrix protein 1 and a laminin receptor 1 (ribosomal protein SA) (Lamr1) pseudogene, complete sequence Length = 178153 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 493 tggagttctttgaagaaaatgaga 516 |||||| ||||||||||||||||| Sbjct: 35904 tggagtactttgaagaaaatgaga 35881
>gb|AC165292.2| Mus musculus BAC clone RP23-319D22 from chromosome 10, complete sequence Length = 192726 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 405 tatgtcctctttattcagaaaaca 428 |||||||||| ||||||||||||| Sbjct: 83924 tatgtcctctctattcagaaaaca 83947
>gb|AC022389.9| Homo sapiens chromosome 10 clone RP11-124L5, complete sequence Length = 198481 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 acctctcctctccttgccag 76 |||||||||||||||||||| Sbjct: 103674 acctctcctctccttgccag 103655
>gb|AC009384.7| Drosophila melanogaster 3L BAC RP98-10L1 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 168652 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 atttctccagtccttggagt 498 |||||||||||||||||||| Sbjct: 79930 atttctccagtccttggagt 79949
>ref|NM_140915.3| Drosophila melanogaster CG14183-RA (CG14183), mRNA Length = 2713 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 479 atttctccagtccttggagt 498 |||||||||||||||||||| Sbjct: 1472 atttctccagtccttggagt 1453
>gb|AC074349.6| Homo sapiens BAC clone RP11-703G6 from 4, complete sequence Length = 176467 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 504 gaagaaaatgagagacagaa 523 |||||||||||||||||||| Sbjct: 48973 gaagaaaatgagagacagaa 48954
>gb|AC027808.9| Homo sapiens chromosome 15, clone RP11-351M8, complete sequence Length = 221936 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 tcacctctcctctccttgcc 74 |||||||||||||||||||| Sbjct: 68325 tcacctctcctctccttgcc 68344
>gb|AY058318.1| Drosophila melanogaster GH08353 full length cDNA Length = 2731 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 479 atttctccagtccttggagt 498 |||||||||||||||||||| Sbjct: 1472 atttctccagtccttggagt 1453
>gb|AC154319.2| Mus musculus BAC clone RP23-331I13 from chromosome 9, complete sequence Length = 196331 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 ctccttcacctctcctctcc 69 |||||||||||||||||||| Sbjct: 26391 ctccttcacctctcctctcc 26372
>dbj|AK047328.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930049N01 product:unclassifiable, full insert sequence Length = 2756 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 ctggagatctggaacttgtt 230 |||||||||||||||||||| Sbjct: 1142 ctggagatctggaacttgtt 1123
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 tcctctttattcagaaaaca 428 |||||||||||||||||||| Sbjct: 27346114 tcctctttattcagaaaaca 27346133
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 atttctccagtccttggagt 498 |||||||||||||||||||| Sbjct: 6921118 atttctccagtccttggagt 6921137
>dbj|AP006741.1| Gallus sonneratii mitochondrial DNA, complete genome Length = 16841 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 ctcacgttacggtgacacct 282 |||||||||||||||||||| Sbjct: 10425 ctcacgttacggtgacacct 10406
>gb|AC144800.3| Mus musculus BAC clone RP24-257N2 from chromosome 10, complete sequence Length = 170671 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 405 tatgtcctctttattcagaaaaca 428 |||||||||| ||||||||||||| Sbjct: 42708 tatgtcctctctattcagaaaaca 42685
>gb|AC116176.4| Homo sapiens BAC clone RP11-299D11 from 2, complete sequence Length = 96974 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 tggagatctggaacttgttg 231 |||||||||||||||||||| Sbjct: 10920 tggagatctggaacttgttg 10939
>dbj|AP004572.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0668C05 Length = 142081 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 atttctccagtccttggagt 498 |||||||||||||||||||| Sbjct: 44933 atttctccagtccttggagt 44952
>emb|BX294441.9| Mouse DNA sequence from clone RP23-421H1 on chromosome 2, complete sequence Length = 96360 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 tctttgaggttgttttcatt 302 |||||||||||||||||||| Sbjct: 61149 tctttgaggttgttttcatt 61168
>dbj|AP003740.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1118_B03 Length = 108992 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 atttctccagtccttggagt 498 |||||||||||||||||||| Sbjct: 77373 atttctccagtccttggagt 77392
>gb|AE003515.4| Drosophila melanogaster chromosome 3L, section 70 of 83 of the complete sequence Length = 234263 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 atttctccagtccttggagt 498 |||||||||||||||||||| Sbjct: 232519 atttctccagtccttggagt 232538
>dbj|AP001988.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-76A17, complete sequence Length = 141796 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 505 aagaaaatgagagacagaaa 524 |||||||||||||||||||| Sbjct: 69478 aagaaaatgagagacagaaa 69459
>emb|AL772310.27| Mouse DNA sequence from clone RP23-34B24 on chromosome 4, complete sequence Length = 211901 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 acaccttctttgaggttgtt 296 |||||||||||||||||||| Sbjct: 171019 acaccttctttgaggttgtt 171000
>dbj|AP003394.1| Homo sapiens genomic DNA, chromosome 11q clone:RP11-278J24, complete sequences Length = 164778 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 505 aagaaaatgagagacagaaa 524 |||||||||||||||||||| Sbjct: 2843 aagaaaatgagagacagaaa 2824
>emb|AL732521.18| Mouse DNA sequence from clone RP23-134A17 on chromosome 4, complete sequence Length = 207223 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 acaccttctttgaggttgtt 296 |||||||||||||||||||| Sbjct: 36186 acaccttctttgaggttgtt 36167
>gb|AC004047.1|AC004047 Homo sapiens chromosome 4 clone B150J4 map 4q25, complete sequence Length = 134649 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 504 gaagaaaatgagagacagaa 523 |||||||||||||||||||| Sbjct: 127811 gaagaaaatgagagacagaa 127792
>dbj|AK116020.1| Ciona intestinalis cDNA, clone:citb004k05, full insert sequence Length = 1918 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 tgaagcaatattaccttatg 408 |||||||||||||||||||| Sbjct: 1674 tgaagcaatattaccttatg 1693
>gb|AC164373.4| Mus musculus chromosome 1, clone RP23-36O22, complete sequence Length = 171278 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 tccttcacctctcctctcct 70 |||||||||||||||||||| Sbjct: 125783 tccttcacctctcctctcct 125764
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 tcctctttattcagaaaaca 428 |||||||||||||||||||| Sbjct: 27271714 tcctctttattcagaaaaca 27271733
>emb|AL731762.2|CNS07YPW Oryza sativa chromosome 12, . BAC OJ1119_E02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 124605 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 tcctctttattcagaaaaca 428 |||||||||||||||||||| Sbjct: 14434 tcctctttattcagaaaaca 14453
>gb|U14911.1|HSRGR1 Human RPE-retinal G protein coupled receptor (rgr) gene, exon 1 Length = 848 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 acctctcctctccttgccag 76 |||||||||||||||||||| Sbjct: 590 acctctcctctccttgccag 571
>emb|AL928553.8| Mouse DNA sequence from clone RP23-312N5 on chromosome 2, complete sequence Length = 148202 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 ctggagatctggaacttgtt 230 |||||||||||||||||||| Sbjct: 47869 ctggagatctggaacttgtt 47888 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,000,492 Number of Sequences: 3902068 Number of extensions: 6000492 Number of successful extensions: 124371 Number of sequences better than 10.0: 67 Number of HSP's better than 10.0 without gapping: 67 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 124070 Number of HSP's gapped (non-prelim): 289 length of query: 617 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 594 effective length of database: 17,143,297,704 effective search space: 10183118836176 effective search space used: 10183118836176 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)