ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd19j03 |
|---|---|
| Clone Library Name | barley_pub |
>YCBX_ECOLI (P75863) Hypothetical protein ycbX| Length = 369 Score = 58.9 bits (141), Expect = 1e-08 Identities = 51/192 (26%), Positives = 85/192 (44%), Gaps = 7/192 (3%) Frame = +3 Query: 39 ATVASILIYPVKSCKGVSVTQAPVTATGFRWDRQWLVVNAKGRALTQRVEPKMALVEVEL 218 AT+ + I+PVKS +G+ +T A +G +DR +++ G +T R P+M V Sbjct: 2 ATLIRLFIHPVKSMRGIGLTHALADVSGLAFDRIFMITEPDGTFITARQFPQM----VRF 57 Query: 219 PPAAFDDDWQPAPDSYLVIRAPGMDTLKVPLAAEHATLD-DVSVWEWSGSAYDEGPEAAE 395 P+ D L + AP + V A+ AT D VW +A + Sbjct: 58 TPSPVHDG--------LHLTAPDGSSAYVRF-ADFATQDAPTEVWGTHFTARIAPDAINK 108 Query: 396 WLSAYFGKPSRLVRFKEESEIRPTNPEYAQGYK------LTFTDCFPFLIASQGSLDALN 557 WLS +F + E ++R P+ + K L+F D +P+L+A++ SL L Sbjct: 109 WLSGFFSR---------EVQLRWVGPQMTRRVKRHNTVPLSFADGYPYLLANEASLRDLQ 159 Query: 558 ELLKEPVPINRF 593 + V + +F Sbjct: 160 QRCPASVKMEQF 171
>CCW14_YEAST (O13547) Covalently-linked cell wall protein 14 precursor (Inner| cell wall protein) Length = 238 Score = 33.9 bits (76), Expect = 0.37 Identities = 30/134 (22%), Positives = 53/134 (39%), Gaps = 2/134 (1%) Frame = -3 Query: 481 AYSGLVGLISD--SSLNRTSRLGFPKXXXXXXXXXXXXXXAEPDHSQTETSSSVACSAAR 308 AYS S+ +SL +S + S T+ SSS A S+ + Sbjct: 75 AYSAFKSSCSEQNASLGDSSSSASSSASSSSKASSSTKASSSSASSSTKASSSSASSSTK 134 Query: 307 GTFSVSIPGALITR*ESGAGCQSSSKAAGGNSTSTSAILGSTRCVSALPLAFTTNHCRSH 128 + S + P + + SSS A + S+S + S++ S+ A +++ S Sbjct: 135 ASSSSAAPSSSKASSTESSSSSSSSTKAPSSEESSSTYVSSSKQASSTSEAHSSSAASST 194 Query: 127 LNPVAVTGACVTET 86 ++ V+ A T T Sbjct: 195 VSQETVSSALPTST 208
>YEGE_ECOLI (P38097) Hypothetical protein yegE| Length = 1105 Score = 33.1 bits (74), Expect = 0.62 Identities = 18/72 (25%), Positives = 33/72 (45%) Frame = +3 Query: 162 GRALTQRVEPKMALVEVELPPAAFDDDWQPAPDSYLVIRAPGMDTLKVPLAAEHATLDDV 341 GR EP+ A E + D+ W+ ++ L++ A G+ + ++P A + L + Sbjct: 836 GRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIP-EARNLWLISL 894 Query: 342 SVWEWSGSAYDE 377 +W G DE Sbjct: 895 KLWSCEGEIIDE 906
>WSC2_YEAST (P53832) Cell wall integrity and stress response component 2| precursor Length = 503 Score = 32.0 bits (71), Expect = 1.4 Identities = 21/89 (23%), Positives = 42/89 (47%) Frame = -3 Query: 352 SQTETSSSVACSAARGTFSVSIPGALITR*ESGAGCQSSSKAAGGNSTSTSAILGSTRCV 173 ++ +T +S + SA + S S + E+ SSS ++ ++TST++ ST Sbjct: 149 TKLDTKTSTSSSATHSSSSSSTTSTTTSSSETTTSSSSSSSSSSTSTTSTTSTTSSTTST 208 Query: 172 SALPLAFTTNHCRSHLNPVAVTGACVTET 86 S+ P +++ S + + T A + T Sbjct: 209 SSSPSTTSSSTSASSSSETSSTQATSSST 237
>YB1E_SCHPO (P87179) Serine-rich protein C30B4.01c precursor| Length = 374 Score = 32.0 bits (71), Expect = 1.4 Identities = 29/120 (24%), Positives = 49/120 (40%) Frame = -3 Query: 454 SDSSLNRTSRLGFPKXXXXXXXXXXXXXXAEPDHSQTETSSSVACSAARGTFSVSIPGAL 275 S SS + +S HS + +SSS + S++R + S S Sbjct: 185 SSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSSSSSSSSSSSSSSRPSSSSSF---- 240 Query: 274 ITR*ESGAGCQSSSKAAGGNSTSTSAILGSTRCVSALPLAFTTNHCRSHLNPVAVTGACV 95 IT S + + +S+STS+ + S+ AL + +NH + LN A+ G + Sbjct: 241 ITTMSSSTFISTVTVTPSSSSSSTSSEVPSSTAALALNASKASNH--TSLNAGAIVGIVI 298 Score = 29.3 bits (64), Expect = 9.0 Identities = 21/92 (22%), Positives = 39/92 (42%) Frame = -3 Query: 457 ISDSSLNRTSRLGFPKXXXXXXXXXXXXXXAEPDHSQTETSSSVACSAARGTFSVSIPGA 278 +S SS++ T+ P S + +SSS + S++ + S S + Sbjct: 127 VSSSSVSSTTS----SSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSS 182 Query: 277 LITR*ESGAGCQSSSKAAGGNSTSTSAILGST 182 + S + SSS ++ +S+S+ I ST Sbjct: 183 SSSSSSSSSSSSSSSSSSSSSSSSSVPITSST 214 Score = 29.3 bits (64), Expect = 9.0 Identities = 29/131 (22%), Positives = 51/131 (38%) Frame = -3 Query: 586 LIGTGSLRSSFSASSEPWDAIRNGKQSVKVSL*P*AYSGLVGLISDSSLNRTSRLGFPKX 407 L G G L+++ S+SS + S P + S SS + +S Sbjct: 117 LTGNGVLQTTVSSSSVSSTTSSSSSSS------PSSSSTTTTTSPSSSSSSSSSSSSSSS 170 Query: 406 XXXXXXXXXXXXXAEPDHSQTETSSSVACSAARGTFSVSIPGALITR*ESGAGCQSSSKA 227 + S + +SSS + S++ + SV I + + S + SSS + Sbjct: 171 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSSSSSSSSSSSS 230 Query: 226 AGGNSTSTSAI 194 + S+S+S I Sbjct: 231 SSRPSSSSSFI 241
>SP96_DICDI (P14328) Spore coat protein SP96| Length = 600 Score = 31.6 bits (70), Expect = 1.8 Identities = 30/130 (23%), Positives = 51/130 (39%) Frame = -3 Query: 475 SGLVGLISDSSLNRTSRLGFPKXXXXXXXXXXXXXXAEPDHSQTETSSSVACSAARGTFS 296 S +G S+SS + +S + A S + SSS + SAA + S Sbjct: 429 SSALGSTSESSASGSSAVSSSASGSSAASSSPSSSAASSSPSSSAASSSPSSSAASSSPS 488 Query: 295 VSIPGALITR*ESGAGCQSSSKAAGGNSTSTSAILGSTRCVSALPLAFTTNHCRSHLNPV 116 S + S +SS +A +S S+S+ S+ S+ + ++ + + Sbjct: 489 SSASSS------SSPSSSASSSSAPSSSASSSSAPSSSASSSSASSSSASSAATTAATTI 542 Query: 115 AVTGACVTET 86 A T A T T Sbjct: 543 ATTAATTTAT 552
>WNK1_MOUSE (P83741) Serine/threonine-protein kinase WNK1 (EC 2.7.11.1) (Protein| kinase with no lysine 1) (Protein kinase, lysine-deficient 1) Length = 2377 Score = 31.6 bits (70), Expect = 1.8 Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 2/92 (2%) Frame = -3 Query: 352 SQTETSSS-VACSAARGTFSVSIPGALITR*ESGAGCQSSSKAAGGN-STSTSAILGSTR 179 S++ TSSS V+ S +VS P + SG+ S+ G ST+T+ +GS Sbjct: 1400 SESPTSSSAVSSSTVPAVVTVSTPSQPVQASTSGSIASSTGSFPPGTFSTTTATTMGSVV 1459 Query: 178 CVSALPLAFTTNHCRSHLNPVAVTGACVTETP 83 A P S+ VA+ + T TP Sbjct: 1460 APDAKPPTVLLQQVASNTAGVAIVTSVSTTTP 1491
>SGS4_DROME (Q00725) Salivary glue protein Sgs-4 precursor| Length = 297 Score = 31.2 bits (69), Expect = 2.4 Identities = 16/52 (30%), Positives = 25/52 (48%) Frame = -3 Query: 262 ESGAGCQSSSKAAGGNSTSTSAILGSTRCVSALPLAFTTNHCRSHLNPVAVT 107 ESG GC S +++ GG S L + +C + P + C+S P A + Sbjct: 214 ESGCGCGSKNESGGGGSGCILKDLLTPKCPDSKPKPQASPKCKSDPKPKAAS 265
>AM3C_ORYSA (P27939) Alpha-amylase isozyme 3C precursor (EC 3.2.1.1)| (1,4-alpha-D-glucan glucanohydrolase) Length = 437 Score = 31.2 bits (69), Expect = 2.4 Identities = 29/100 (29%), Positives = 40/100 (40%), Gaps = 2/100 (2%) Frame = +3 Query: 39 ATVASILIYPVKSCKGVSVTQAPVTATGFRWDRQWLVVNAKGRALTQRVEPKMA--LVEV 212 +T S L++ V C G + QA V GF W+ W L V+ A + V Sbjct: 5 STTMSCLLFFVLLCLGSHLAQAQVLFQGFNWE-SWKKQGGWYNFLHSHVDDIAATGVTHV 63 Query: 213 ELPPAAFDDDWQPAPDSYLVIRAPGMDTLKVPLAAEHATL 332 LPP + AP Y+ R +D K AE +L Sbjct: 64 WLPPPSH----SVAPQGYMPGRLYDLDASKYGTGAELRSL 99
>COL4_ARATH (Q940T9) Zinc finger protein CONSTANS-LIKE 4| Length = 362 Score = 31.2 bits (69), Expect = 2.4 Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 5/77 (6%) Frame = +3 Query: 357 SGSAYDEGPEAAEWLSAYFGKPSR-----LVRFKEESEIRPTNPEYAQGYKLTFTDCFPF 521 +GS +E EAA WL K + +V E+ +PE G + F+D P+ Sbjct: 123 NGSREEEEEEAASWLLLPNPKTTTTATAGIVAVTSAEEVPGDSPEMNTGQQYLFSDPDPY 182 Query: 522 LIASQGSLDALNELLKE 572 L G++D E L++ Sbjct: 183 LDLDYGNVDPKVESLEQ 199
>Y1517_MYCBO (P64856) UPF0353 protein Mb1517| Length = 335 Score = 30.0 bits (66), Expect = 5.3 Identities = 30/125 (24%), Positives = 49/125 (39%), Gaps = 10/125 (8%) Frame = +3 Query: 144 LVVNAKGRALTQRVEPKMALVEVELPPAAFDDDWQPAPDSYLVIRAPGMDTLKVPLAAEH 323 LV++ VEP +V + F D+ P + L+ A L P Sbjct: 101 LVIDVSQSMRATDVEPSR-MVAAQEAAKQFADELTPGINLGLIAYAGTATVLVSPTTNRE 159 Query: 324 ATLDDVSVWEWS-----GSAYDEGPEAAEWLSAYFG-----KPSRLVRFKEESEIRPTNP 473 AT + + +++ G A +A + A G P+R+V F + E PTNP Sbjct: 160 ATKNALDKLQFADRTATGEAIFTALQAIATVGAVIGGGDTPPPARIVLFSDGKETMPTNP 219 Query: 474 EYAQG 488 + +G Sbjct: 220 DNPKG 224
>Y1481_MYCTU (P64855) UPF0353 protein Rv1481/MT1528| Length = 335 Score = 30.0 bits (66), Expect = 5.3 Identities = 30/125 (24%), Positives = 49/125 (39%), Gaps = 10/125 (8%) Frame = +3 Query: 144 LVVNAKGRALTQRVEPKMALVEVELPPAAFDDDWQPAPDSYLVIRAPGMDTLKVPLAAEH 323 LV++ VEP +V + F D+ P + L+ A L P Sbjct: 101 LVIDVSQSMRATDVEPSR-MVAAQEAAKQFADELTPGINLGLIAYAGTATVLVSPTTNRE 159 Query: 324 ATLDDVSVWEWS-----GSAYDEGPEAAEWLSAYFG-----KPSRLVRFKEESEIRPTNP 473 AT + + +++ G A +A + A G P+R+V F + E PTNP Sbjct: 160 ATKNALDKLQFADRTATGEAIFTALQAIATVGAVIGGGDTPPPARIVLFSDGKETMPTNP 219 Query: 474 EYAQG 488 + +G Sbjct: 220 DNPKG 224
>HUTI_RALSO (Q8XW31) Imidazolonepropionase (EC 3.5.2.7)| (Imidazolone-5-propionate hydrolase) Length = 408 Score = 30.0 bits (66), Expect = 5.3 Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 1/87 (1%) Frame = -3 Query: 358 DHSQTETSSSVACSAARGTFSVSIPGALITR*ESGAGCQSSSKAAGGNSTSTSAILGSTR 179 DH + T + VA A GT +V +PGA E+ + + AG ++ T Sbjct: 266 DHLECLTDAGVAAMAEAGTVAVLLPGAFYCLRETRLPPLQALRQAGVPMAVSTDCNPGTS 325 Query: 178 CVSALPLAFTTNHCRSHLNPV-AVTGA 101 +S+L LA L P+ A+TGA Sbjct: 326 PLSSLLLAMNMACTLFRLTPLEALTGA 352
>HEMA_BRV2 (P0C0W0) Hemagglutinin-esterase homolog precursor (EC 3.1.1.53)| (HE) Length = 416 Score = 29.6 bits (65), Expect = 6.9 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%) Frame = +3 Query: 36 AATVASILIYPVKS-CKGVSVTQAPVTATGFRWDRQWLVVNAKGRA 170 A+TV L+YP KS C PV A W Q+ +A G+A Sbjct: 258 ASTVGKFLVYPTKSYCMDTMNITVPVQAVQSIWSEQYASDDAIGQA 303
>HEMA_BRV1 (P0C0V9) Hemagglutinin-esterase homolog precursor (EC 3.1.1.53)| (HE) Length = 416 Score = 29.6 bits (65), Expect = 6.9 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%) Frame = +3 Query: 36 AATVASILIYPVKS-CKGVSVTQAPVTATGFRWDRQWLVVNAKGRA 170 A+TV L+YP KS C PV A W Q+ +A G+A Sbjct: 258 ASTVGKFLVYPTKSYCMDTMNITVPVQAVQSIWSEQYASDDAIGQA 303
>YEN1_SCHPO (O13695) Hypothetical serine-rich protein C11G7.01 in chromosome I| Length = 536 Score = 29.6 bits (65), Expect = 6.9 Identities = 24/93 (25%), Positives = 43/93 (46%) Frame = -3 Query: 346 TETSSSVACSAARGTFSVSIPGALITR*ESGAGCQSSSKAAGGNSTSTSAILGSTRCVSA 167 + SSS+ S++ S S+ + + S + SSS A +S+S+S+ L S+ S Sbjct: 16 SSASSSIPASSSSAAASTSLSSSSVIP-SSSSSMLSSSSATAISSSSSSSPLSSSSFTSP 74 Query: 166 LPLAFTTNHCRSHLNPVAVTGACVTETPLQDLT 68 +F T+ S + + A +T + LT Sbjct: 75 ASSSFITSLVSSSSQQSSSSSASLTSSSSATLT 107
>PYC_ASPNG (Q9HES8) Pyruvate carboxylase (EC 6.4.1.1) (Pyruvic carboxylase)| (PCB) Length = 1192 Score = 29.6 bits (65), Expect = 6.9 Identities = 14/47 (29%), Positives = 21/47 (44%) Frame = +3 Query: 234 DDDWQPAPDSYLVIRAPGMDTLKVPLAAEHATLDDVSVWEWSGSAYD 374 D W+ A S L R +D L + HA + S+ W G+ +D Sbjct: 582 DTTWRDAHQSLLATRVRTIDLLNIAHETSHALANAYSLECWGGATFD 628
>SPEN_DROME (Q8SX83) Protein split ends| Length = 5560 Score = 29.3 bits (64), Expect = 9.0 Identities = 22/106 (20%), Positives = 40/106 (37%), Gaps = 14/106 (13%) Frame = -3 Query: 415 PKXXXXXXXXXXXXXXAEPDHSQTETSSSVACSAARGTFSVSIPGALITR*ES------- 257 P + H+ + SS C+ A G S ++ +T S Sbjct: 452 PSSYSSSHSSSSSSHSSSHSHASSPVQSSGNCAMAEGRSSRTVNSVTVTSNSSNPSGTAV 511 Query: 256 -------GAGCQSSSKAAGGNSTSTSAILGSTRCVSALPLAFTTNH 140 G GC SSS ++ +S+S S+ C++A P+ + ++ Sbjct: 512 TVSSAGVGGGCGSSSSSSSSSSSSGSS------CLTANPVVHSEDN 551
>RBP23_HUMAN (O14715) Ran-binding protein 2-like 3 (RanBP2L3) (Fragment)| Length = 755 Score = 29.3 bits (64), Expect = 9.0 Identities = 13/36 (36%), Positives = 18/36 (50%) Frame = +3 Query: 348 WEWSGSAYDEGPEAAEWLSAYFGKPSRLVRFKEESE 455 W WS S + +G E L+A F P FK++ E Sbjct: 119 WMWSASDFSDGDAKLERLAAKFKTPELAEEFKQKFE 154
>PHBC_RALEU (P23608) Poly-beta-hydroxybutyrate polymerase (EC 2.3.1.-)| (Poly(3-hydroxybutyrate) polymerase) (PHB polymerase) (PHB synthase) (Poly(3-hydroxyalkanoate) polymerase) (PHA polymerase) (PHA synthase) (Polyhydroxyalkanoic acid synthase) Length = 589 Score = 29.3 bits (64), Expect = 9.0 Identities = 17/50 (34%), Positives = 20/50 (40%), Gaps = 1/50 (2%) Frame = +3 Query: 93 VTQAPVT-ATGFRWDRQWLVVNAKGRALTQRVEPKMALVEVELPPAAFDD 239 VT P AT W RQW G A + AL V++ PA D Sbjct: 21 VTPGPFDPATWLEWSRQWQGTEGNGHAAASGIPGLDALAGVKIAPAQLGD 70
>VIT2_CHICK (P02845) Vitellogenin-2 precursor (Vitellogenin II) (Major| vitellogenin) [Contains: Lipovitellin-1 (Lipovitellin I) (LVI); Phosvitin (PV); Lipovitellin-2 (Lipovitellin II) (LVII); YGP40] Length = 1850 Score = 29.3 bits (64), Expect = 9.0 Identities = 21/77 (27%), Positives = 39/77 (50%) Frame = -3 Query: 352 SQTETSSSVACSAARGTFSVSIPGALITR*ESGAGCQSSSKAAGGNSTSTSAILGSTRCV 173 S++ +SSS + S ++ + S S + +R S + SSS ++ +S+S S+ S+ Sbjct: 1204 SRSSSSSSSSSSNSKSSSSSSKSSSSSSRSRSSSKSSSSSSSSSSSSSSKSSSSRSSSSS 1263 Query: 172 SALPLAFTTNHCRSHLN 122 S + +H HLN Sbjct: 1264 SKSSSHHSHSHHSGHLN 1280
>SYI_BACSU (Q45477) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 921 Score = 29.3 bits (64), Expect = 9.0 Identities = 17/56 (30%), Positives = 32/56 (57%) Frame = +3 Query: 81 KGVSVTQAPVTATGFRWDRQWLVVNAKGRALTQRVEPKMALVEVELPPAAFDDDWQ 248 KGV ++AP GF + + + +A+TQ+++ K ALV++E ++ DW+ Sbjct: 351 KGVMTSEAP----GF----EGMFYDDANKAITQQLDEKGALVKLEFITHSYPHDWR 398
>PYC_ASPTE (O93918) Pyruvate carboxylase (EC 6.4.1.1) (Pyruvic carboxylase)| (PCB) Length = 1193 Score = 29.3 bits (64), Expect = 9.0 Identities = 14/47 (29%), Positives = 21/47 (44%) Frame = +3 Query: 234 DDDWQPAPDSYLVIRAPGMDTLKVPLAAEHATLDDVSVWEWSGSAYD 374 D W+ A S L R +D L + HA + S+ W G+ +D Sbjct: 583 DTTWRDAHQSLLATRVRTIDLLNIAHETSHALSNAYSLECWGGATFD 629
>VGLX_EHV1B (P28968) Glycoprotein X precursor| Length = 797 Score = 29.3 bits (64), Expect = 9.0 Identities = 31/103 (30%), Positives = 42/103 (40%), Gaps = 8/103 (7%) Frame = -3 Query: 352 SQTETSSSVACSAARGTFSVSIPGALITR*ESGAGCQSSSKA--------AGGNSTSTSA 197 S T TS+S + +A T S P + T ES +S+ A +TS + Sbjct: 285 SATPTSTSTSAAA---TTSTPTPTSAATSAESTTEAPTSTPTTDTTTPSEATTATTSPES 341 Query: 196 ILGSTRCVSALPLAFTTNHCRSHLNPVAVTGACVTETPLQDLT 68 S SA AFTT SH +P + TG+ T P T Sbjct: 342 TTVSASTTSATTTAFTTE---SHTSPDSSTGSTSTAEPSSTFT 381
>RGPD8_HUMAN (Q99666) RANBP2-like and GRIP domain-containing protein 8| (Ran-binding protein 2-like 1) (RanBP2L1) (Sperm membrane protein BS-63) Length = 1765 Score = 29.3 bits (64), Expect = 9.0 Identities = 13/36 (36%), Positives = 18/36 (50%) Frame = +3 Query: 348 WEWSGSAYDEGPEAAEWLSAYFGKPSRLVRFKEESE 455 W WS S + +G E L+A F P FK++ E Sbjct: 1129 WMWSASHFSDGDAKLERLAAKFKTPELAEEFKQKFE 1164
>RBP22_HUMAN (Q53T03) Ran-binding protein 2-like 2 (RanBP2L2)| Length = 1765 Score = 29.3 bits (64), Expect = 9.0 Identities = 13/36 (36%), Positives = 18/36 (50%) Frame = +3 Query: 348 WEWSGSAYDEGPEAAEWLSAYFGKPSRLVRFKEESE 455 W WS S + +G E L+A F P FK++ E Sbjct: 1129 WMWSASDFSDGDAKLERLAAKFKTPELAEEFKQKFE 1164
>YL61_SCHPO (Q8TFG9) Hypothetical serine/threonine-rich protein PB15E9.01c| precursor Length = 943 Score = 29.3 bits (64), Expect = 9.0 Identities = 26/103 (25%), Positives = 46/103 (44%) Frame = -3 Query: 352 SQTETSSSVACSAARGTFSVSIPGALITR*ESGAGCQSSSKAAGGNSTSTSAILGSTRCV 173 S + TSSS+A S+ T S + + ++ + SSS A+ +++TSA S+ Sbjct: 187 SNSATSSSLASSSLNSTTSATATSSSLSSTAASNSATSSSLASSSLNSTTSATATSSSIS 246 Query: 172 SALPLAFTTNHCRSHLNPVAVTGACVTETPLQDLTGYMRMDAT 44 S + ++ S + A T A T + Q T + +T Sbjct: 247 STVS---SSTPLTSSNSTTAATSASATSSSAQYNTSSLLPSST 286
>VGLX_EHV1V (Q6S6W0) Glycoprotein X precursor| Length = 866 Score = 29.3 bits (64), Expect = 9.0 Identities = 31/103 (30%), Positives = 42/103 (40%), Gaps = 8/103 (7%) Frame = -3 Query: 352 SQTETSSSVACSAARGTFSVSIPGALITR*ESGAGCQSSSKA--------AGGNSTSTSA 197 S T TS+S + +A T S P + T ES +S+ A +TS + Sbjct: 354 SATPTSTSTSAAA---TTSTPTPTSAATSAESTTEAPTSTPTTDTTTPSEATTATTSPES 410 Query: 196 ILGSTRCVSALPLAFTTNHCRSHLNPVAVTGACVTETPLQDLT 68 S SA AFTT SH +P + TG+ T P T Sbjct: 411 TTVSASTTSATTTAFTTE---SHTSPDSSTGSTSTAEPSSTFT 450
>NU214_DROME (Q9W1X4) Nuclear pore complex protein Nup214 (Nucleoporin Nup214)| (214 kDa nucleoporin) (DNup214) Length = 1711 Score = 29.3 bits (64), Expect = 9.0 Identities = 14/57 (24%), Positives = 29/57 (50%) Frame = -3 Query: 256 GAGCQSSSKAAGGNSTSTSAILGSTRCVSALPLAFTTNHCRSHLNPVAVTGACVTET 86 G G + S + GG ++ + GST+ V+ P + T + +P++ T + ++ T Sbjct: 1219 GGGLSAGSFSFGGTIDASKGLFGSTKPVATAPTSVT--EANNKTDPISTTPSAISTT 1273
>MID2_YEAST (P36027) Mating process protein MID2 (Serine-rich protein SMS1)| (Protein kinase A interference protein) Length = 376 Score = 29.3 bits (64), Expect = 9.0 Identities = 24/91 (26%), Positives = 34/91 (37%) Frame = -3 Query: 454 SDSSLNRTSRLGFPKXXXXXXXXXXXXXXAEPDHSQTETSSSVACSAARGTFSVSIPGAL 275 SDSS + +S +E S T+TS+S + S + S S P + Sbjct: 102 SDSSTSSSSSASSDSSSSSSFSISSTSATSESSTSSTQTSTSSSSSLSSTPSSSSSPSTI 161 Query: 274 ITR*ESGAGCQSSSKAAGGNSTSTSAILGST 182 + S+ A ST TS I G T Sbjct: 162 TS--APSTSSTPSTTAYNQGSTITSIINGKT 190
>G156_PARPR (P13837) G surface protein, allelic form 156 precursor| Length = 2715 Score = 29.3 bits (64), Expect = 9.0 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 7/62 (11%) Frame = -3 Query: 256 GAGCQSSSKA----AGGNSTSTSAILGSTRCVSALPLAFTTNHCRSHLNPVAV---TGAC 98 GAG SS+ AG + T+A + T C +A + F +C S+LN V AC Sbjct: 1657 GAGNYSSANCNEMKAGCTNNGTTACVAKT-CANAAGITFNHTNCNSYLNTCTVNSGNSAC 1715 Query: 97 VT 92 T Sbjct: 1716 QT 1717 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 69,080,680 Number of Sequences: 219361 Number of extensions: 1369165 Number of successful extensions: 5357 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 5036 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5298 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5216272880 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
