ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd19i08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY106150.1| Zea mays PCO099943 mRNA sequence 234 2e-58
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 212 8e-52
3dbj|AP006060.3| Oryza sativa (japonica cultivar-group) genomic D... 212 8e-52
4dbj|AP005885.3| Oryza sativa (japonica cultivar-group) genomic D... 212 8e-52
5dbj|AK065315.1| Oryza sativa (japonica cultivar-group) cDNA clon... 212 8e-52
6gb|AY111036.1| Zea mays CL1582_4 mRNA sequence 178 1e-41
7ref|XM_473556.1| Oryza sativa (japonica cultivar-group), predic... 149 1e-32
8emb|AL607001.4|OSJN00128 Oryza sativa genomic DNA, chromosome 4,... 149 1e-32
9dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 149 1e-32
10dbj|AK099906.1| Oryza sativa (japonica cultivar-group) cDNA clon... 149 1e-32
11dbj|AK069684.1| Oryza sativa (japonica cultivar-group) cDNA clon... 149 1e-32
12gb|AC109365.2| Oryza sativa (japonica cultivar-group) chromosome... 82 2e-12
13dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
14dbj|AK121243.1| Oryza sativa (japonica cultivar-group) cDNA clon... 82 2e-12
15gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 82 2e-12
16ref|NM_197301.1| Oryza sativa (japonica cultivar-group) unknown ... 72 2e-09
17gb|AC087192.14| Oryza sativa chromosome 10 BAC OSJNBa0005K07 gen... 72 2e-09
18dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
19gb|AY987028.1| Triticum aestivum dehydration-induced protein mRN... 72 2e-09
20dbj|AK100601.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-09
21dbj|AK073237.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-09
22gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 72 2e-09
23ref|NM_185478.1| Oryza sativa (japonica cultivar-group), predic... 56 1e-04
24ref|NM_197407.1| Oryza sativa (japonica cultivar-group) hypothet... 56 1e-04
25gb|AC079029.11| Oryza sativa chromosome 10 BAC OSJNBb0028C01 gen... 56 1e-04
26dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
27dbj|AP002838.2| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
28dbj|AP000391.2| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
29gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete g... 46 0.10
30emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 44 0.41
31emb|AL603925.20| Mouse DNA sequence from clone RP23-175K24 on ch... 42 1.6
32gb|AC116644.4| Homo sapiens BAC clone RP11-678J5 from 4, complet... 42 1.6
33gb|AC093607.3| Homo sapiens BAC clone RP11-654J13 from 4, comple... 42 1.6
34dbj|AP005463.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
35dbj|AP004329.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
36emb|BX678774.7| Mouse DNA sequence from clone RP23-193A4 on chro... 42 1.6
37emb|AL672229.12| Mouse DNA sequence from clone RP23-335A6 on chr... 42 1.6
38gb|AC154990.1| Homo sapiens chromosome 9 clone fa1066, complete ... 40 6.4
39gb|AC168217.2| Mus musculus BAC clone RP24-498P8 from chromosome... 40 6.4
40ref|XM_520366.1| PREDICTED: Pan troglodytes similar to small nuc... 40 6.4
41ref|XM_610350.2| PREDICTED: Bos taurus similar to X-linked neuro... 40 6.4
42gb|BC008877.2| Homo sapiens caspase recruitment domain family, m... 40 6.4
43ref|NM_052813.2| Homo sapiens caspase recruitment domain family,... 40 6.4
44emb|CT009492.5| M.truncatula DNA sequence from clone MTH2-93A21 ... 40 6.4
45gb|AC147158.3| Pan troglodytes BAC clone CH251-137M10 from Y, co... 40 6.4
46gb|AC142354.3| Pan troglodytes BAC clone RP43-21M11 from Y, comp... 40 6.4
47emb|AL592301.14| Human DNA sequence from clone RP11-413M3 on chr... 40 6.4
48gb|BC070091.1| Homo sapiens caspase recruitment domain family, m... 40 6.4
49dbj|BS000641.4| Pan troglodytes chromosome Y clone: PTB-094I22, ... 40 6.4
50gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 40 6.4
51dbj|AK127481.1| Homo sapiens cDNA FLJ45573 fis, clone BRTHA30111... 40 6.4
52emb|CR603312.1| full-length cDNA clone CS0DI039YL23 of Placenta ... 40 6.4
53dbj|AK024001.1| Homo sapiens cDNA FLJ13939 fis, clone Y79AA1000827 40 6.4
54gb|U40712.1|OCU40712 Oryctolagus cuniculus telokin gene, 5' region 40 6.4
55gb|AF311287.1|AF311287 Homo sapiens caspase recruitment domain p... 40 6.4
56dbj|BS000147.1| Pan troglodytes chromosome 22 clone:PTB-072G02, ... 40 6.4
57dbj|BS000073.1| Pan troglodytes chromosome 22 clone:RP43-040P11,... 40 6.4
58dbj|BS000072.1| Pan troglodytes chromosome 22 clone:RP43-156P08,... 40 6.4
59gb|AF241725.1|AF241725 Homo sapiens 21 map 21q21 clone B780G18, ... 40 6.4
60dbj|BS000573.1| Pan troglodytes chromosome Y clone:RP43-021M11, ... 40 6.4
61gb|AF236874.1|AF236874 Homo sapiens chromosome 21 map 21q21, BAC... 40 6.4
62emb|AL163227.2|HS21C027 Homo sapiens chromosome 21 segment HS21C027 40 6.4
63gb|AC137678.11| Mus musculus chromosome 9, clone RP24-484G16, co... 40 6.4
64dbj|AP000475.4| Homo sapiens genomic DNA, chromosome 21 clone:RP... 40 6.4
65dbj|AP006638.1| Lotus japonicus genomic DNA, chromosome 3, clone... 40 6.4
66emb|AL121578.1|HSXKSRPXR Homo sapiens chromosome X sequence from... 40 6.4
67gb|M76234.1|RABMYLCTEK Oryctolagus cuniculus telokin gene, exon 2 40 6.4 
>gb|AY106150.1| Zea mays PCO099943 mRNA sequence
          Length = 1572

 Score =  234 bits (118), Expect = 2e-58
 Identities = 166/182 (91%)
 Strand = Plus / Plus

                                                                        
Query: 18   ctgctggagatggacaggatcctgaggccggagggcacggtgatcatcagggacgatgtg 77
            ||||| || |||||||| || |||||||| ||||||||||| |||||||| || || |||
Sbjct: 1067 ctgctcgaaatggacagaattctgaggccagagggcacggtcatcatcagagatgacgtg 1126

                                                                        
Query: 78   gacctgctagtgaagataaagagcgtcgcggacgggatgagatggaatagccagatcgtg 137
            ||| || ||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 1127 gacatgttagtgaagataaagagcatcacggacgggatgagatggaatagccagatcgtg 1186

                                                                        
Query: 138  gaccacgaagacggtccgctcgtccgggagaagctcctccttgttgtgaagacatactgg 197
            || |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1187 gatcacgaagatggtccgctcgtccgggagaagctcctccttgctgtgaagacatactgg 1246

              
Query: 198  ac 199
            ||
Sbjct: 1247 ac 1248
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  212 bits (107), Expect = 8e-52
 Identities = 167/187 (89%)
 Strand = Plus / Minus

                                                                            
Query: 14       catcctgctggagatggacaggatcctgaggccggagggcacggtgatcatcagggacga 73
                ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 27549925 catcctgctggagatggacaggatcctgaggcccgagggcacggtgatcatcagagacga 27549866

                                                                            
Query: 74       tgtggacctgctagtgaagataaagagcgtcgcggacgggatgagatggaatagccagat 133
                 |||||| |||| |||||| | ||||||| ||||||||||||||| ||| | ||||||||
Sbjct: 27549865 cgtggacatgctggtgaaggtgaagagcgccgcggacgggatgaggtgggacagccagat 27549806

                                                                            
Query: 134      cgtggaccacgaagacggtccgctcgtccgggagaagctcctccttgttgtgaagacata 193
                ||| ||||| ||||| || |||||||||||||||||| ||||||| || || ||||| ||
Sbjct: 27549805 cgtcgaccatgaagatggcccgctcgtccgggagaagatcctcctggtcgtcaagacgta 27549746

                       
Query: 194      ctggaca 200
                |||||||
Sbjct: 27549745 ctggaca 27549739
to top
>dbj|AP006060.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0135D07
          Length = 170587

 Score =  212 bits (107), Expect = 8e-52
 Identities = 167/187 (89%)
 Strand = Plus / Minus

                                                                         
Query: 14    catcctgctggagatggacaggatcctgaggccggagggcacggtgatcatcagggacga 73
             ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 29594 catcctgctggagatggacaggatcctgaggcccgagggcacggtgatcatcagagacga 29535

                                                                         
Query: 74    tgtggacctgctagtgaagataaagagcgtcgcggacgggatgagatggaatagccagat 133
              |||||| |||| |||||| | ||||||| ||||||||||||||| ||| | ||||||||
Sbjct: 29534 cgtggacatgctggtgaaggtgaagagcgccgcggacgggatgaggtgggacagccagat 29475

                                                                         
Query: 134   cgtggaccacgaagacggtccgctcgtccgggagaagctcctccttgttgtgaagacata 193
             ||| ||||| ||||| || |||||||||||||||||| ||||||| || || ||||| ||
Sbjct: 29474 cgtcgaccatgaagatggcccgctcgtccgggagaagatcctcctggtcgtcaagacgta 29415

                    
Query: 194   ctggaca 200
             |||||||
Sbjct: 29414 ctggaca 29408
to top
>dbj|AP005885.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0657H12
          Length = 142688

 Score =  212 bits (107), Expect = 8e-52
 Identities = 167/187 (89%)
 Strand = Plus / Minus

                                                                          
Query: 14     catcctgctggagatggacaggatcctgaggccggagggcacggtgatcatcagggacga 73
              ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 141647 catcctgctggagatggacaggatcctgaggcccgagggcacggtgatcatcagagacga 141588

                                                                          
Query: 74     tgtggacctgctagtgaagataaagagcgtcgcggacgggatgagatggaatagccagat 133
               |||||| |||| |||||| | ||||||| ||||||||||||||| ||| | ||||||||
Sbjct: 141587 cgtggacatgctggtgaaggtgaagagcgccgcggacgggatgaggtgggacagccagat 141528

                                                                          
Query: 134    cgtggaccacgaagacggtccgctcgtccgggagaagctcctccttgttgtgaagacata 193
              ||| ||||| ||||| || |||||||||||||||||| ||||||| || || ||||| ||
Sbjct: 141527 cgtcgaccatgaagatggcccgctcgtccgggagaagatcctcctggtcgtcaagacgta 141468

                     
Query: 194    ctggaca 200
              |||||||
Sbjct: 141467 ctggaca 141461
to top
>dbj|AK065315.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002P05, full
            insert sequence
          Length = 2289

 Score =  212 bits (107), Expect = 8e-52
 Identities = 167/187 (89%)
 Strand = Plus / Plus

                                                                        
Query: 14   catcctgctggagatggacaggatcctgaggccggagggcacggtgatcatcagggacga 73
            ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 1873 catcctgctggagatggacaggatcctgaggcccgagggcacggtgatcatcagagacga 1932

                                                                        
Query: 74   tgtggacctgctagtgaagataaagagcgtcgcggacgggatgagatggaatagccagat 133
             |||||| |||| |||||| | ||||||| ||||||||||||||| ||| | ||||||||
Sbjct: 1933 cgtggacatgctggtgaaggtgaagagcgccgcggacgggatgaggtgggacagccagat 1992

                                                                        
Query: 134  cgtggaccacgaagacggtccgctcgtccgggagaagctcctccttgttgtgaagacata 193
            ||| ||||| ||||| || |||||||||||||||||| ||||||| || || ||||| ||
Sbjct: 1993 cgtcgaccatgaagatggcccgctcgtccgggagaagatcctcctggtcgtcaagacgta 2052

                   
Query: 194  ctggaca 200
            |||||||
Sbjct: 2053 ctggaca 2059
to top
>gb|AY111036.1| Zea mays CL1582_4 mRNA sequence
          Length = 781

 Score =  178 bits (90), Expect = 1e-41
 Identities = 162/186 (87%)
 Strand = Plus / Minus

                                                                       
Query: 14  catcctgctggagatggacaggatcctgaggccggagggcacggtgatcatcagggacga 73
           |||||| ||||||||||||||||||||||||||   ||||||||||||| ||||||| ||
Sbjct: 593 catcctcctggagatggacaggatcctgaggcccaggggcacggtgatcgtcagggaaga 534

                                                                       
Query: 74  tgtggacctgctagtgaagataaagagcgtcgcggacgggatgagatggaatagccagat 133
            |||||| |||| |||||| | |||||| | |||||||||||||| ||| | ||||||||
Sbjct: 533 cgtggacatgctggtgaaggtcaagagcctggcggacgggatgaggtgggagagccagat 474

                                                                       
Query: 134 cgtggaccacgaagacggtccgctcgtccgggagaagctcctccttgttgtgaagacata 193
           ||| |||||||||||||| ||||||||| |||||||| ||||||| || || ||||| ||
Sbjct: 473 cgtcgaccacgaagacggcccgctcgtcagggagaagatcctcctggtcgtcaagacgta 414

                 
Query: 194 ctggac 199
           ||||||
Sbjct: 413 ctggac 408
to top
>ref|XM_473556.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1941

 Score =  149 bits (75), Expect = 1e-32
 Identities = 162/191 (84%)
 Strand = Plus / Plus

                                                                        
Query: 18   ctgctggagatggacaggatcctgaggccggagggcacggtgatcatcagggacgatgtg 77
            |||||||| |||||||| || |||||||| ||||| || ||||| || || || ||||| 
Sbjct: 1738 ctgctggaaatggacagaatactgaggcctgagggtacagtgattataagagatgatgtt 1797

                                                                        
Query: 78   gacctgctagtgaagataaagagcgtcgcggacgggatgagatggaatagccagatcgtg 137
            ||  || | ||||| ||||||||| |  | ||||| ||||||||||| ||||| ||||| 
Sbjct: 1798 gatatgttggtgaaaataaagagcattaccgacggtatgagatggaacagccaaatcgtt 1857

                                                                        
Query: 138  gaccacgaagacggtccgctcgtccgggagaagctcctccttgttgtgaagacatactgg 197
            || |||||||| || |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1858 gatcacgaagatggcccgctcgtccgggagaagctcctccttgttgtaaagacatactgg 1917

                       
Query: 198  acacttgggga 208
            ||||| |||||
Sbjct: 1918 acactcgggga 1928
to top
>emb|AL607001.4|OSJN00128 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088I22,
             complete sequence
          Length = 164572

 Score =  149 bits (75), Expect = 1e-32
 Identities = 162/191 (84%)
 Strand = Plus / Plus

                                                                         
Query: 18    ctgctggagatggacaggatcctgaggccggagggcacggtgatcatcagggacgatgtg 77
             |||||||| |||||||| || |||||||| ||||| || ||||| || || || ||||| 
Sbjct: 93293 ctgctggaaatggacagaatactgaggcctgagggtacagtgattataagagatgatgtt 93352

                                                                         
Query: 78    gacctgctagtgaagataaagagcgtcgcggacgggatgagatggaatagccagatcgtg 137
             ||  || | ||||| ||||||||| |  | ||||| ||||||||||| ||||| ||||| 
Sbjct: 93353 gatatgttggtgaaaataaagagcattaccgacggtatgagatggaacagccaaatcgtt 93412

                                                                         
Query: 138   gaccacgaagacggtccgctcgtccgggagaagctcctccttgttgtgaagacatactgg 197
             || |||||||| || |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 93413 gatcacgaagatggcccgctcgtccgggagaagctcctccttgttgtaaagacatactgg 93472

                        
Query: 198   acacttgggga 208
             ||||| |||||
Sbjct: 93473 acactcgggga 93483
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  149 bits (75), Expect = 1e-32
 Identities = 162/191 (84%)
 Strand = Plus / Minus

                                                                            
Query: 18       ctgctggagatggacaggatcctgaggccggagggcacggtgatcatcagggacgatgtg 77
                |||||||| |||||||| || |||||||| ||||| || ||||| || || || ||||| 
Sbjct: 28697665 ctgctggaaatggacagaatactgaggcctgagggtacagtgattataagagatgatgtt 28697606

                                                                            
Query: 78       gacctgctagtgaagataaagagcgtcgcggacgggatgagatggaatagccagatcgtg 137
                ||  || | ||||| ||||||||| |  | ||||| ||||||||||| ||||| ||||| 
Sbjct: 28697605 gatatgttggtgaaaataaagagcattaccgacggtatgagatggaacagccaaatcgtt 28697546

                                                                            
Query: 138      gaccacgaagacggtccgctcgtccgggagaagctcctccttgttgtgaagacatactgg 197
                || |||||||| || |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 28697545 gatcacgaagatggcccgctcgtccgggagaagctcctccttgttgtaaagacatactgg 28697486

                           
Query: 198      acacttgggga 208
                ||||| |||||
Sbjct: 28697485 acactcgggga 28697475
to top
>dbj|AK099906.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116A04, full
            insert sequence
          Length = 2060

 Score =  149 bits (75), Expect = 1e-32
 Identities = 162/191 (84%)
 Strand = Plus / Plus

                                                                        
Query: 18   ctgctggagatggacaggatcctgaggccggagggcacggtgatcatcagggacgatgtg 77
            |||||||| |||||||| || |||||||| ||||| || ||||| || || || ||||| 
Sbjct: 1824 ctgctggaaatggacagaatactgaggcctgagggtacagtgattataagagatgatgtt 1883

                                                                        
Query: 78   gacctgctagtgaagataaagagcgtcgcggacgggatgagatggaatagccagatcgtg 137
            ||  || | ||||| ||||||||| |  | ||||| ||||||||||| ||||| ||||| 
Sbjct: 1884 gatatgatggtgaaaataaagagcattaccgacggtatgagatggaacagccaaatcgtt 1943

                                                                        
Query: 138  gaccacgaagacggtccgctcgtccgggagaagctcctccttgttgtgaagacatactgg 197
            || |||||||| || |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1944 gatcacgaagatggcccgctcgtccgggagaagctcctccttgttgtaaagacatactgg 2003

                       
Query: 198  acacttgggga 208
            ||||| |||||
Sbjct: 2004 acactcgggga 2014
to top
>dbj|AK069684.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031N01, full
            insert sequence
          Length = 3063

 Score =  149 bits (75), Expect = 1e-32
 Identities = 162/191 (84%)
 Strand = Plus / Plus

                                                                        
Query: 18   ctgctggagatggacaggatcctgaggccggagggcacggtgatcatcagggacgatgtg 77
            |||||||| |||||||| || |||||||| ||||| || ||||| || || || ||||| 
Sbjct: 1824 ctgctggaaatggacagaatactgaggcctgagggtacagtgattataagagatgatgtt 1883

                                                                        
Query: 78   gacctgctagtgaagataaagagcgtcgcggacgggatgagatggaatagccagatcgtg 137
            ||  || | ||||| ||||||||| |  | ||||| ||||||||||| ||||| ||||| 
Sbjct: 1884 gatatgttggtgaaaataaagagcattaccgacggtatgagatggaacagccaaatcgtt 1943

                                                                        
Query: 138  gaccacgaagacggtccgctcgtccgggagaagctcctccttgttgtgaagacatactgg 197
            || |||||||| || |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1944 gatcacgaagatggcccgctcgtccgggagaagctcctccttgttgtaaagacatactgg 2003

                       
Query: 198  acacttgggga 208
            ||||| |||||
Sbjct: 2004 acactcgggga 2014
to top
>gb|AC109365.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0034P08, complete sequence
          Length = 173088

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 59/65 (90%)
 Strand = Plus / Minus

                                                                         
Query: 9     gaggccatcctgctggagatggacaggatcctgaggccggagggcacggtgatcatcagg 68
             |||| ||||||||||||||||||  |||||||| |||||||||||||||||||| || ||
Sbjct: 63057 gaggacatcctgctggagatggatcggatcctgcggccggagggcacggtgatcctccgg 62998

                  
Query: 69    gacga 73
             |||||
Sbjct: 62997 gacga 62993
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 59/65 (90%)
 Strand = Plus / Plus

                                                                            
Query: 9        gaggccatcctgctggagatggacaggatcctgaggccggagggcacggtgatcatcagg 68
                |||| ||||||||||||||||||  |||||||| |||||||||||||||||||| || ||
Sbjct: 22278241 gaggacatcctgctggagatggatcggatcctgcggccggagggcacggtgatcctccgg 22278300

                     
Query: 69       gacga 73
                |||||
Sbjct: 22278301 gacga 22278305
to top
>dbj|AK121243.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099B06, full
            insert sequence
          Length = 2310

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 59/65 (90%)
 Strand = Plus / Plus

                                                                        
Query: 9    gaggccatcctgctggagatggacaggatcctgaggccggagggcacggtgatcatcagg 68
            |||| ||||||||||||||||||  |||||||| |||||||||||||||||||| || ||
Sbjct: 1805 gaggacatcctgctggagatggatcggatcctgcggccggagggcacggtgatcctccgg 1864

                 
Query: 69   gacga 73
            |||||
Sbjct: 1865 gacga 1869
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 59/65 (90%)
 Strand = Plus / Plus

                                                                            
Query: 9        gaggccatcctgctggagatggacaggatcctgaggccggagggcacggtgatcatcagg 68
                |||| ||||||||||||||||||  |||||||| |||||||||||||||||||| || ||
Sbjct: 22588152 gaggacatcctgctggagatggatcggatcctgcggccggagggcacggtgatcctccgg 22588211

                     
Query: 69       gacga 73
                |||||
Sbjct: 22588212 gacga 22588216
to top
>ref|NM_197301.1| Oryza sativa (japonica cultivar-group) unknown protein
            (OSJNBa0005K07.2), mRNA
          Length = 2259

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 42/44 (95%)
 Strand = Plus / Plus

                                                        
Query: 22   tggagatggacaggatcctgaggccggagggcacggtgatcatc 65
            ||||||||||||||||||||||||| |||||||||| |||||||
Sbjct: 1858 tggagatggacaggatcctgaggcccgagggcacggcgatcatc 1901
to top
>gb|AC087192.14| Oryza sativa chromosome 10 BAC OSJNBa0005K07 genomic sequence, complete
             sequence
          Length = 113606

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 42/44 (95%)
 Strand = Plus / Plus

                                                         
Query: 22    tggagatggacaggatcctgaggccggagggcacggtgatcatc 65
             ||||||||||||||||||||||||| |||||||||| |||||||
Sbjct: 58908 tggagatggacaggatcctgaggcccgagggcacggcgatcatc 58951
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 42/44 (95%)
 Strand = Plus / Plus

                                                            
Query: 22       tggagatggacaggatcctgaggccggagggcacggtgatcatc 65
                ||||||||||||||||||||||||| |||||||||| |||||||
Sbjct: 19106337 tggagatggacaggatcctgaggcccgagggcacggcgatcatc 19106380



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                                
Query: 15       atcctgctggagatggacaggatcctgaggcc 46
                ||||||||||||||||||||||||||| ||||
Sbjct: 19692200 atcctgctggagatggacaggatcctgcggcc 19692169
to top
>gb|AY987028.1| Triticum aestivum dehydration-induced protein mRNA, complete cds
          Length = 1075

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 48/52 (92%)
 Strand = Plus / Plus

                                                               
Query: 14  catcctgctggagatggacaggatcctgaggccggagggcacggtgatcatc 65
           |||||| ||||||||||||||||| |||||||| |||||||||| |||||||
Sbjct: 529 catcctcctggagatggacaggatactgaggcccgagggcacggcgatcatc 580
to top
>dbj|AK100601.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107D05, full
            insert sequence
          Length = 2722

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 42/44 (95%)
 Strand = Plus / Plus

                                                        
Query: 22   tggagatggacaggatcctgaggccggagggcacggtgatcatc 65
            ||||||||||||||||||||||||| |||||||||| |||||||
Sbjct: 2039 tggagatggacaggatcctgaggcccgagggcacggcgatcatc 2082
to top
>dbj|AK073237.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033005B11, full
            insert sequence
          Length = 2538

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 42/44 (95%)
 Strand = Plus / Plus

                                                        
Query: 22   tggagatggacaggatcctgaggccggagggcacggtgatcatc 65
            ||||||||||||||||||||||||| |||||||||| |||||||
Sbjct: 1942 tggagatggacaggatcctgaggcccgagggcacggcgatcatc 1985
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 42/44 (95%)
 Strand = Plus / Plus

                                                            
Query: 22       tggagatggacaggatcctgaggccggagggcacggtgatcatc 65
                ||||||||||||||||||||||||| |||||||||| |||||||
Sbjct: 19117613 tggagatggacaggatcctgaggcccgagggcacggcgatcatc 19117656



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                                
Query: 15       atcctgctggagatggacaggatcctgaggcc 46
                ||||||||||||||||||||||||||| ||||
Sbjct: 19703476 atcctgctggagatggacaggatcctgcggcc 19703445
to top
>ref|NM_185478.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1857

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 85/104 (81%)
 Strand = Plus / Plus

                                                                        
Query: 19   tgctggagatggacaggatcctgaggccggagggcacggtgatcatcagggacgatgtgg 78
            |||||||||||||| |  | |||||||| || |||||||| ||  |||| |||||||| |
Sbjct: 1670 tgctggagatggaccgtgtgctgaggccagaaggcacggtaatattcagagacgatgttg 1729

                                                        
Query: 79   acctgctagtgaagataaagagcgtcgcggacgggatgagatgg 122
            |  | || |||||||| |||| | |||| |||||||||||||||
Sbjct: 1730 atgtcctggtgaagatcaagaacatcgcagacgggatgagatgg 1773
to top
>ref|NM_197407.1| Oryza sativa (japonica cultivar-group) hypothetical protein
            (OSJNBb0028C01.40), mRNA
          Length = 1701

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                            
Query: 15   atcctgctggagatggacaggatcctgaggcc 46
            ||||||||||||||||||||||||||| ||||
Sbjct: 1486 atcctgctggagatggacaggatcctgcggcc 1517
to top
>gb|AC079029.11| Oryza sativa chromosome 10 BAC OSJNBb0028C01 genomic sequence, complete
             sequence
          Length = 137366

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                             
Query: 15    atcctgctggagatggacaggatcctgaggcc 46
             ||||||||||||||||||||||||||| ||||
Sbjct: 85312 atcctgctggagatggacaggatcctgcggcc 85343
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 85/104 (81%)
 Strand = Plus / Plus

                                                                           
Query: 19      tgctggagatggacaggatcctgaggccggagggcacggtgatcatcagggacgatgtgg 78
               |||||||||||||| |  | |||||||| || |||||||| ||  |||| |||||||| |
Sbjct: 1484186 tgctggagatggaccgtgtgctgaggccagaaggcacggtaatattcagagacgatgttg 1484245

                                                           
Query: 79      acctgctagtgaagataaagagcgtcgcggacgggatgagatgg 122
               |  | || |||||||| |||| | |||| |||||||||||||||
Sbjct: 1484246 atgtcctggtgaagatcaagaacatcgcagacgggatgagatgg 1484289



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                 
Query: 22       tggagatggacaggatcctgaggccggagggca 54
                ||||| ||||||||||| ||||||||| |||||
Sbjct: 29670483 tggaggtggacaggatcgtgaggccggggggca 29670515
to top
>dbj|AP002838.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0038F22
          Length = 101666

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 85/104 (81%)
 Strand = Plus / Plus

                                                                         
Query: 19    tgctggagatggacaggatcctgaggccggagggcacggtgatcatcagggacgatgtgg 78
             |||||||||||||| |  | |||||||| || |||||||| ||  |||| |||||||| |
Sbjct: 91472 tgctggagatggaccgtgtgctgaggccagaaggcacggtaatattcagagacgatgttg 91531

                                                         
Query: 79    acctgctagtgaagataaagagcgtcgcggacgggatgagatgg 122
             |  | || |||||||| |||| | |||| |||||||||||||||
Sbjct: 91532 atgtcctggtgaagatcaagaacatcgcagacgggatgagatgg 91575
to top
>dbj|AP000391.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0538C01
          Length = 155643

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 85/104 (81%)
 Strand = Plus / Plus

                                                                         
Query: 19    tgctggagatggacaggatcctgaggccggagggcacggtgatcatcagggacgatgtgg 78
             |||||||||||||| |  | |||||||| || |||||||| ||  |||| |||||||| |
Sbjct: 12910 tgctggagatggaccgtgtgctgaggccagaaggcacggtaatattcagagacgatgttg 12969

                                                         
Query: 79    acctgctagtgaagataaagagcgtcgcggacgggatgagatgg 122
             |  | || |||||||| |||| | |||| |||||||||||||||
Sbjct: 12970 atgtcctggtgaagatcaagaacatcgcagacgggatgagatgg 13013
to top
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome
          Length = 6260361

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 441     cagagatttcattatgtttcttgctgt 467
               ||||||||||||||||||| |||||||
Sbjct: 2983139 cagagatttcattatgttttttgctgt 2983165
to top
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 7       acgaggccatcctgctggagat 28
               ||||||||||||||||||||||
Sbjct: 1472998 acgaggccatcctgctggagat 1473019
to top
>emb|AL603925.20| Mouse DNA sequence from clone RP23-175K24 on chromosome 11 Contains the
              gene for nuclear DNA binding protein C1d and a aldo-keto
              reductase family 1 member B3 (aldose reductase) (Akr1b3)
              pseudogene, complete sequence
          Length = 232869

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 46     cggagggcacggtgatcatca 66
              |||||||||||||||||||||
Sbjct: 118904 cggagggcacggtgatcatca 118884
to top
>gb|AC116644.4| Homo sapiens BAC clone RP11-678J5 from 4, complete sequence
          Length = 75455

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 443   gagatttcattatgtttcttg 463
             |||||||||||||||||||||
Sbjct: 34132 gagatttcattatgtttcttg 34152
to top
>gb|AC093607.3| Homo sapiens BAC clone RP11-654J13 from 4, complete sequence
          Length = 143993

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 384   caagtatatgacagattttga 404
             |||||||||||||||||||||
Sbjct: 43599 caagtatatgacagattttga 43619
to top
>dbj|AP005463.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0712G01
          Length = 87056

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 22    tggagatggacaggatcctgaggccggagggca 54
             ||||| ||||||||||| ||||||||| |||||
Sbjct: 43597 tggaggtggacaggatcgtgaggccggggggca 43629
to top
>dbj|AP004329.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OJ1663_H12
          Length = 125422

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                               
Query: 22     tggagatggacaggatcctgaggccggagggca 54
              ||||| ||||||||||| ||||||||| |||||
Sbjct: 114068 tggaggtggacaggatcgtgaggccggggggca 114100
to top
>emb|BX678774.7| Mouse DNA sequence from clone RP23-193A4 on chromosome 2, complete
             sequence
          Length = 123748

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 263   agatactgggcagatgtcaca 283
             |||||||||||||||||||||
Sbjct: 26291 agatactgggcagatgtcaca 26271
to top
>emb|AL672229.12| Mouse DNA sequence from clone RP23-335A6 on chromosome 17, complete
             sequence
          Length = 187977

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 406   atgggaaggacagccagccagccaa 430
             |||| ||||||||||||||||||||
Sbjct: 48089 atggaaaggacagccagccagccaa 48113
to top
>gb|AC154990.1| Homo sapiens chromosome 9 clone fa1066, complete sequence
          Length = 35350

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 8     cgaggccatcctgctggagatgga 31
             |||||||||||||||| |||||||
Sbjct: 26110 cgaggccatcctgctgcagatgga 26087
to top
>gb|AC168217.2| Mus musculus BAC clone RP24-498P8 from chromosome 9, complete sequence
          Length = 171426

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 411    aaggacagccagccagccaa 430
              ||||||||||||||||||||
Sbjct: 154632 aaggacagccagccagccaa 154651
to top
>ref|XM_520366.1| PREDICTED: Pan troglodytes similar to small nuclear RNA activating
            complex, polypeptide 4, 190kDa (LOC464858), mRNA
          Length = 5310

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 8    cgaggccatcctgctggagatgga 31
            |||||||||||||||| |||||||
Sbjct: 5193 cgaggccatcctgctgcagatgga 5216
to top
>ref|XM_610350.2| PREDICTED: Bos taurus similar to X-linked neuroligin 4 (LOC531847),
            mRNA
          Length = 3038

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 132  atcgtggaccacgaagacgg 151
            ||||||||||||||||||||
Sbjct: 1003 atcgtggaccacgaagacgg 1022
to top
>gb|BC008877.2| Homo sapiens caspase recruitment domain family, member 9, mRNA (cDNA
            clone MGC:14973 IMAGE:4139529), complete cds
          Length = 1827

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 8    cgaggccatcctgctggagatgga 31
            |||||||||||||||| |||||||
Sbjct: 1170 cgaggccatcctgctgcagatgga 1193
to top
>ref|NM_052813.2| Homo sapiens caspase recruitment domain family, member 9 (CARD9),
            mRNA
          Length = 2136

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 8    cgaggccatcctgctggagatgga 31
            |||||||||||||||| |||||||
Sbjct: 1170 cgaggccatcctgctgcagatgga 1193
to top
>emb|CT009492.5| M.truncatula DNA sequence from clone MTH2-93A21 on chromosome 3,
             complete sequence
          Length = 122557

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 317   ttttgaagttttatcttgct 336
             ||||||||||||||||||||
Sbjct: 66020 ttttgaagttttatcttgct 66039
to top
>gb|AC147158.3| Pan troglodytes BAC clone CH251-137M10 from Y, complete sequence
          Length = 167138

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 439   gacagagatttcattatgtt 458
             ||||||||||||||||||||
Sbjct: 47813 gacagagatttcattatgtt 47832
to top
>gb|AC142354.3| Pan troglodytes BAC clone RP43-21M11 from Y, complete sequence
          Length = 163480

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 439    gacagagatttcattatgtt 458
              ||||||||||||||||||||
Sbjct: 155833 gacagagatttcattatgtt 155852
to top
>emb|AL592301.14| Human DNA sequence from clone RP11-413M3 on chromosome 9 Contains the
             3' end of the gene for activator of G-protein signalling 3
             (AGS3), two novel genes, the CARD9 gene for caspase
             recruitment domain family member 9, the SNAPC4 gene for a
             190kDa small nuclear RNA activating complex polypeptide 4,
              the SDCCAG3 gene for serologically defined colon cancer
             antigen 3, the INPP5E gene for a 72kDa inositol
             polyphosphate-5-phosphatase, the gene for
             phosphatidylinositol polyphosphate 5-phosphatase type IV
             (PPI5PIV), a novel gene (KIAA0310), the 3' end of the
             NOTCH1 gene for Notch homolog 1 translocation-associated
             (Drosophila) and twenty CpG islands, complete sequence
          Length = 188462

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 8     cgaggccatcctgctggagatgga 31
             |||||||||||||||| |||||||
Sbjct: 13422 cgaggccatcctgctgcagatgga 13399
to top
>gb|BC070091.1| Homo sapiens caspase recruitment domain family, member 9, mRNA (cDNA
            clone MGC:87491 IMAGE:30343821), complete cds
          Length = 4078

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 8    cgaggccatcctgctggagatgga 31
            |||||||||||||||| |||||||
Sbjct: 1158 cgaggccatcctgctgcagatgga 1181
to top
>dbj|BS000641.4| Pan troglodytes chromosome Y clone: PTB-094I22, complete sequence
          Length = 190308

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 439   gacagagatttcattatgtt 458
             ||||||||||||||||||||
Sbjct: 98353 gacagagatttcattatgtt 98334
to top
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 439      gacagagatttcattatgtt 458
                ||||||||||||||||||||
Sbjct: 17308105 gacagagatttcattatgtt 17308124
to top
>dbj|AK127481.1| Homo sapiens cDNA FLJ45573 fis, clone BRTHA3011149, highly  similar
           to Homo sapiens caspase recruitment domain protein 9
          Length = 4577

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 8   cgaggccatcctgctggagatgga 31
           |||||||||||||||| |||||||
Sbjct: 957 cgaggccatcctgctgcagatgga 980
to top
>emb|CR603312.1| full-length cDNA clone CS0DI039YL23 of Placenta Cot 25-normalized of
            Homo sapiens (human)
          Length = 2072

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 8    cgaggccatcctgctggagatgga 31
            |||||||||||||||| |||||||
Sbjct: 1176 cgaggccatcctgctgcagatgga 1199
to top
>dbj|AK024001.1| Homo sapiens cDNA FLJ13939 fis, clone Y79AA1000827
          Length = 2176

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 8    cgaggccatcctgctggagatgga 31
            |||||||||||||||| |||||||
Sbjct: 1175 cgaggccatcctgctgcagatgga 1198
to top
>gb|U40712.1|OCU40712 Oryctolagus cuniculus telokin gene, 5' region
          Length = 3607

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 33   aggatcctgaggccggaggg 52
            ||||||||||||||||||||
Sbjct: 3204 aggatcctgaggccggaggg 3223
to top
>gb|AF311287.1|AF311287 Homo sapiens caspase recruitment domain protein 9 mRNA, complete cds
          Length = 2132

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 8    cgaggccatcctgctggagatgga 31
            |||||||||||||||| |||||||
Sbjct: 1156 cgaggccatcctgctgcagatgga 1179
to top
>dbj|BS000147.1| Pan troglodytes chromosome 22 clone:PTB-072G02, map 22, complete
              sequences
          Length = 179346

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 242    tgagaaactgagaaaattga 261
              ||||||||||||||||||||
Sbjct: 128782 tgagaaactgagaaaattga 128801
to top
>dbj|BS000073.1| Pan troglodytes chromosome 22 clone:RP43-040P11, map 22, complete
             sequences
          Length = 148593

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 242   tgagaaactgagaaaattga 261
             ||||||||||||||||||||
Sbjct: 21612 tgagaaactgagaaaattga 21631
to top
>dbj|BS000072.1| Pan troglodytes chromosome 22 clone:RP43-156P08, map 22, complete
              sequences
          Length = 155118

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 242    tgagaaactgagaaaattga 261
              ||||||||||||||||||||
Sbjct: 112846 tgagaaactgagaaaattga 112865
to top
>gb|AF241725.1|AF241725 Homo sapiens 21 map 21q21 clone B780G18, complete sequence
          Length = 172663

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 242    tgagaaactgagaaaattga 261
              ||||||||||||||||||||
Sbjct: 124063 tgagaaactgagaaaattga 124082
to top
>dbj|BS000573.1| Pan troglodytes chromosome Y clone:RP43-021M11, complete sequences
          Length = 163477

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 439  gacagagatttcattatgtt 458
            ||||||||||||||||||||
Sbjct: 7648 gacagagatttcattatgtt 7629
to top
>gb|AF236874.1|AF236874 Homo sapiens chromosome 21 map 21q21, BAC B242B02, complete sequence
          Length = 157270

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 242   tgagaaactgagaaaattga 261
             ||||||||||||||||||||
Sbjct: 45866 tgagaaactgagaaaattga 45885
to top
>emb|AL163227.2|HS21C027 Homo sapiens chromosome 21 segment HS21C027
          Length = 340000

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 242    tgagaaactgagaaaattga 261
              ||||||||||||||||||||
Sbjct: 191967 tgagaaactgagaaaattga 191986
to top
>gb|AC137678.11| Mus musculus chromosome 9, clone RP24-484G16, complete sequence
          Length = 172337

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 411    aaggacagccagccagccaa 430
              ||||||||||||||||||||
Sbjct: 133079 aaggacagccagccagccaa 133060
to top
>dbj|AP000475.4| Homo sapiens genomic DNA, chromosome 21 clone:RP11-44J6, complete
            sequence
          Length = 160762

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 242  tgagaaactgagaaaattga 261
            ||||||||||||||||||||
Sbjct: 6642 tgagaaactgagaaaattga 6661
to top
>dbj|AP006638.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT47I16, TM0208c,
             complete sequence
          Length = 48081

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 248   actgagaaaattgacagata 267
             ||||||||||||||||||||
Sbjct: 12016 actgagaaaattgacagata 11997
to top
>emb|AL121578.1|HSXKSRPXR Homo sapiens chromosome X sequence from 12 cosmids, map Xp21.1 region
             DXS709-SRPX, complete sequence
          Length = 337101

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 431   atggggcagacagagatttc 450
             ||||||||||||||||||||
Sbjct: 85789 atggggcagacagagatttc 85770
to top
>gb|M76234.1|RABMYLCTEK Oryctolagus cuniculus telokin gene, exon 2
          Length = 961

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 33  aggatcctgaggccggaggg 52
           ||||||||||||||||||||
Sbjct: 196 aggatcctgaggccggaggg 215


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,943,756
Number of Sequences: 3902068
Number of extensions: 4943756
Number of successful extensions: 108068
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 107668
Number of HSP's gapped (non-prelim): 400
length of query: 472
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 450
effective length of database: 17,147,199,772
effective search space: 7716239897400
effective search space used: 7716239897400
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top