ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd19i05 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY228552.1| Hordeum vulgare agmatine coumaroyltransferase (ACT) mRNA, complete cds Length = 1508 Score = 1195 bits (603), Expect = 0.0 Identities = 613/615 (99%), Gaps = 1/615 (0%) Strand = Plus / Plus Query: 2 cgggagttcatctccaagnctcaaggcgcaggcgtcggctggcgcgcccagaccctgcag 61 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 707 cgggagttcatctccaag-ctcaaggcgcaggcgtcggctggcgcgcccagaccctgcag 765 Query: 62 caccctgcagtgcgtggtggcacacctgtggcggagcatgacgatggcgcgcgggctcga 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 766 caccctgcagtgcgtggtggcacacctgtggcggagcatgacgatggcgcgcgggctcga 825 Query: 122 cggcggggagaccaccagcgtcgccatcgccgtggacgggagagcgcggatgagcccgca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 826 cggcggggagaccaccagcgtcgccatcgccgtggacgggagagcgcggatgagcccgca 885 Query: 182 ggtgccggacggatacaccggcaacgtcatcctctgggcgcggccaaccaccacggcggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 886 ggtgccggacggatacaccggcaacgtcatcctctgggcgcggccaaccaccacggcggg 945 Query: 242 ggagctcgtgaccaggccggtgaagcacgccgtggagctcatcagcagggaggtggcccg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 946 ggagctcgtgaccaggccggtgaagcacgccgtggagctcatcagcagggaggtggcccg 1005 Query: 302 gatcaacgatggctacttcaagtccttcatcgacttcgccaactccggcgcggtggagaa 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1006 gatcaacgatggctacttcaagtccttcatcgacttcgccaactccggcgcggtggagaa 1065 Query: 362 ggagcggctggtggcgacggccgacgcggcggacatggtgctgagccccaacatcgaggt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1066 ggagcggctggtggcgacggccgacgcggcggacatggtgctgagccccaacatcgaggt 1125 Query: 422 ggacagctggctgcggatcccgttctacgacatggacttcggcggcgggcggccattctt 481 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1126 ggacagctggctgctgatcccgttctacgacatggacttcggcggcgggcggccattctt 1185 Query: 482 cttcatgcccagctacctgccggtggagggtctgctcatcctgctgccgtctttcttggg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1186 cttcatgcccagctacctgccggtggagggtctgctcatcctgctgccgtctttcttggg 1245 Query: 542 cgacggcagcgtggacgcctacgtgccactctttagccgcgacatgaacaccttcaagaa 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1246 cgacggcagcgtggacgcctacgtgccactctttagccgcgacatgaacaccttcaagaa 1305 Query: 602 ctgctgctacagcct 616 ||||||||||||||| Sbjct: 1306 ctgctgctacagcct 1320
>gb|AY234333.1| Triticum aestivum putative agmatine coumaroyltransferase mRNA, partial cds Length = 1220 Score = 952 bits (480), Expect = 0.0 Identities = 579/611 (94%), Gaps = 1/611 (0%) Strand = Plus / Plus Query: 2 cgggagttcatctccaagnctcaaggcgcaggcgtcggctggcgcgcccagaccctgcag 61 |||||||||||||||| | |||||||||||||||||||||||||||||||| || ||||| Sbjct: 442 cgggagttcatctcca-ggctcaaggcgcaggcgtcggctggcgcgcccaggccgtgcag 500 Query: 62 caccctgcagtgcgtggtggcacacctgtggcggagcatgacgatggcgcgcgggctcga 121 ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 501 caccctgcagtgcgtggtggcgcacctgtggcggagcatgacaatggcgcgcgggctcga 560 Query: 122 cggcggggagaccaccagcgtcgccatcgccgtggacgggagagcgcggatgagcccgca 181 ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 561 cggcggggagagcaccagcgtcgccatcgcggtggacgggagagcgcggatgagcccgca 620 Query: 182 ggtgccggacggatacaccggcaacgtcatcctctgggcgcggccaaccaccacggcggg 241 |||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| || Sbjct: 621 ggtgccggacggatacactggcaacgtcatcctctgggcgcggcccaccacgacggcagg 680 Query: 242 ggagctcgtgaccaggccggtgaagcacgccgtggagctcatcagcagggaggtggcccg 301 || |||||| |||||||| |||||||||| ||||||||||||| | |||||||| |||| Sbjct: 681 tgaactcgtggccaggccgttgaagcacgcggtggagctcatcatccgggaggtgtcccg 740 Query: 302 gatcaacgatggctacttcaagtccttcatcgacttcgccaactccggcgcggtggagaa 361 |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 741 tatcaacgacggctacttcaagtccttcatcgacttcgccaactccggcacggtggagaa 800 Query: 362 ggagcggctggtggcgacggccgacgcggcggacatggtgctgagccccaacatcgaggt 421 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 801 ggaacggctggtggcgacggccgacgcggcggacatggtgctgagccccaacatcgaggt 860 Query: 422 ggacagctggctgcggatcccgttctacgacatggacttcggcggcgggcggccattctt 481 ||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||| Sbjct: 861 ggacagctggctgcggatcccgttctacgacatggacctcggcggcggccggcccttctt 920 Query: 482 cttcatgcccagctacctgccggtggagggtctgctcatcctgctgccgtctttcttggg 541 |||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||| Sbjct: 921 cttcatgcccagctacctgccggtggagggcctgctcatcctgctaccgtccttcttggg 980 Query: 542 cgacggcagcgtggacgcctacgtgccactctttagccgcgacatgaacaccttcaagaa 601 |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 981 cgacggcagcgtgggcgcctacgtgccactctttagccgcgacatgaacactttcaagaa 1040 Query: 602 ctgctgctaca 612 ||||||||||| Sbjct: 1041 ctgctgctaca 1051
>ref|XM_474243.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1293 Score = 726 bits (366), Expect = 0.0 Identities = 550/610 (90%), Gaps = 1/610 (0%) Strand = Plus / Plus Query: 2 cgggagttcatctccaagnctcaaggcgcaggcgtcggctggcgcgcccagaccctgcag 61 ||||| |||||||| ||| |||||| ||||||||||||||||||||| | | || | ||| Sbjct: 649 cgggaattcatctcgaag-ctcaagtcgcaggcgtcggctggcgcgcaccggccgtacag 707 Query: 62 caccctgcagtgcgtggtggcacacctgtggcggagcatgacgatggcgcgcgggctcga 121 ||| ||||||||||||||||| ||||||||||| ||||||||| ||| ||||||||||| Sbjct: 708 cacgctgcagtgcgtggtggcgcacctgtggcgatgcatgacgaaggcacgcgggctcga 767 Query: 122 cggcggggagaccaccagcgtcgccatcgccgtggacgggagagcgcggatgagcccgca 181 ||| | ||| |||||||||| ||||||||| |||||| | |||||||||||||||| Sbjct: 768 cgggcgcgagtccaccagcgtgtgcatcgccgtcgacgggcgcgcgcggatgagcccgcc 827 Query: 182 ggtgccggacggatacaccggcaacgtcatcctctgggcgcggccaaccaccacggcggg 241 |||||||||||| ||||| ||||| ||| | |||||||||||||||||| | ||||| || Sbjct: 828 ggtgccggacggctacacgggcaatgtcgtgctctgggcgcggccaaccgcgacggccgg 887 Query: 242 ggagctcgtgaccaggccggtgaagcacgccgtggagctcatcagcagggaggtggcccg 301 ||||| |||||||||||| |||||||||||||||||||||||| | |||||||| ||| Sbjct: 888 tgagctggtgaccaggccgctgaagcacgccgtggagctcatcaaccgggaggtgatccg 947 Query: 302 gatcaacgatggctacttcaagtccttcatcgacttcgccaactccggcgcggtggagaa 361 ||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||| | Sbjct: 948 gatcaacgacggctacttcaagtcgttcatcgacttcgccaactccggtgcggtggagga 1007 Query: 362 ggagcggctggtggcgacggccgacgcggcggacatggtgctgagccccaacatcgaggt 421 |||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 1008 ggagcggctggtggcgtcggccgacgcggcggagatggtgctgagcccgaacatcgaggt 1067 Query: 422 ggacagctggctgcggatcccgttctacgacatggacttcggcggcgggcggccattctt 481 ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 1068 ggacagctggctgcggatcccgttctacgacctcgacttcggcggcgggcggccattctt 1127 Query: 482 cttcatgcccagctacctgccggtggagggtctgctcatcctgctgccgtctttcttggg 541 ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| || Sbjct: 1128 cttcatgcccagctacctgccggtggaaggtttgctcatcctgctgccgtctttcttcgg 1187 Query: 542 cgacggcagcgtggacgcctacgtgccactctttagccgcgacatgaacaccttcaagaa 601 |||||| ||||| ||||| |||||||||||||| |||||||||||| || ||||||||| Sbjct: 1188 cgacgggagcgttgacgcgtacgtgccactcttcagccgcgacatggacgtcttcaagaa 1247 Query: 602 ctgctgctac 611 |||||||||| Sbjct: 1248 ctgctgctac 1257
>emb|AL606646.3|OSJN00091 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0087O24, complete sequence Length = 146168 Score = 726 bits (366), Expect = 0.0 Identities = 550/610 (90%), Gaps = 1/610 (0%) Strand = Plus / Plus Query: 2 cgggagttcatctccaagnctcaaggcgcaggcgtcggctggcgcgcccagaccctgcag 61 ||||| |||||||| ||| |||||| ||||||||||||||||||||| | | || | ||| Sbjct: 10989 cgggaattcatctcgaag-ctcaagtcgcaggcgtcggctggcgcgcaccggccgtacag 11047 Query: 62 caccctgcagtgcgtggtggcacacctgtggcggagcatgacgatggcgcgcgggctcga 121 ||| ||||||||||||||||| ||||||||||| ||||||||| ||| ||||||||||| Sbjct: 11048 cacgctgcagtgcgtggtggcgcacctgtggcgatgcatgacgaaggcacgcgggctcga 11107 Query: 122 cggcggggagaccaccagcgtcgccatcgccgtggacgggagagcgcggatgagcccgca 181 ||| | ||| |||||||||| ||||||||| |||||| | |||||||||||||||| Sbjct: 11108 cgggcgcgagtccaccagcgtgtgcatcgccgtcgacgggcgcgcgcggatgagcccgcc 11167 Query: 182 ggtgccggacggatacaccggcaacgtcatcctctgggcgcggccaaccaccacggcggg 241 |||||||||||| ||||| ||||| ||| | |||||||||||||||||| | ||||| || Sbjct: 11168 ggtgccggacggctacacgggcaatgtcgtgctctgggcgcggccaaccgcgacggccgg 11227 Query: 242 ggagctcgtgaccaggccggtgaagcacgccgtggagctcatcagcagggaggtggcccg 301 ||||| |||||||||||| |||||||||||||||||||||||| | |||||||| ||| Sbjct: 11228 tgagctggtgaccaggccgctgaagcacgccgtggagctcatcaaccgggaggtgatccg 11287 Query: 302 gatcaacgatggctacttcaagtccttcatcgacttcgccaactccggcgcggtggagaa 361 ||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||| | Sbjct: 11288 gatcaacgacggctacttcaagtcgttcatcgacttcgccaactccggtgcggtggagga 11347 Query: 362 ggagcggctggtggcgacggccgacgcggcggacatggtgctgagccccaacatcgaggt 421 |||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 11348 ggagcggctggtggcgtcggccgacgcggcggagatggtgctgagcccgaacatcgaggt 11407 Query: 422 ggacagctggctgcggatcccgttctacgacatggacttcggcggcgggcggccattctt 481 ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 11408 ggacagctggctgcggatcccgttctacgacctcgacttcggcggcgggcggccattctt 11467 Query: 482 cttcatgcccagctacctgccggtggagggtctgctcatcctgctgccgtctttcttggg 541 ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| || Sbjct: 11468 cttcatgcccagctacctgccggtggaaggtttgctcatcctgctgccgtctttcttcgg 11527 Query: 542 cgacggcagcgtggacgcctacgtgccactctttagccgcgacatgaacaccttcaagaa 601 |||||| ||||| ||||| |||||||||||||| |||||||||||| || ||||||||| Sbjct: 11528 cgacgggagcgttgacgcgtacgtgccactcttcagccgcgacatggacgtcttcaagaa 11587 Query: 602 ctgctgctac 611 |||||||||| Sbjct: 11588 ctgctgctac 11597 Score = 579 bits (292), Expect = e-162 Identities = 487/552 (88%) Strand = Plus / Minus Query: 59 cagcaccctgcagtgcgtggtggcacacctgtggcggagcatgacgatggcgcgcgggct 118 |||||||||||||||||||||||| ||||||||||| |||| |||||||| |||||||| Sbjct: 14460 cagcaccctgcagtgcgtggtggcgcacctgtggcgctgcataacgatggctcgcgggct 14401 Query: 119 cgacggcggggagaccaccagcgtcgccatcgccgtggacgggagagcgcggatgagccc 178 ||| || | | | |||| ||||| ||||||||||||||||| | |||||||||||||| Sbjct: 14400 cgaggggagcgtggccacgagcgtgtccatcgccgtggacgggcgcgcgcggatgagccc 14341 Query: 179 gcaggtgccggacggatacaccggcaacgtcatcctctgggcgcggccaaccaccacggc 238 || ||||| ||| || ||||| ||||||||| | |||||||| ||||| ||| |||| || Sbjct: 14340 gccggtgctggatggctacacgggcaacgtcgtgctctgggcacggccgaccgccaccgc 14281 Query: 239 gggggagctcgtgaccaggccggtgaagcacgccgtggagctcatcagcagggaggtggc 298 | ||||||||||||||| |||| || ||||||| ||| ||||||| | ||| |||||| Sbjct: 14280 gcgggagctcgtgaccatgccgctgcagcacgcgatgggtctcatcaaccgggcggtggc 14221 Query: 299 ccggatcaacgatggctacttcaagtccttcatcgacttcgccaactccggcgcggtgga 358 ||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 14220 acggatcaacgacggctacttcaagtcgttcgtcgacttcgccaactccggcgcggtgga 14161 Query: 359 gaaggagcggctggtggcgacggccgacgcggcggacatggtgctgagccccaacatcga 418 | ||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||| Sbjct: 14160 ggaggagcggctggtggcgtcggccgacgcggcggagatggtgctgagcccgaacatcga 14101 Query: 419 ggtggacagctggctgcggatcccgttctacgacatggacttcggcggcgggcggccatt 478 ||||||||||||||||||||||||||||||||| | ||||||||| |||| | |||||| Sbjct: 14100 ggtggacagctggctgcggatcccgttctacgagcttgacttcggcagcggccagccatt 14041 Query: 479 cttcttcatgcccagctacctgccggtggagggtctgctcatcctgctgccgtctttctt 538 | | |||| ||| ||||||||||||||||||||||| |||||||| ||||| ||||||| Sbjct: 14040 cctgttcacgcctagctacctgccggtggagggtcttctcatcctcctgccatctttctc 13981 Query: 539 gggcgacggcagcgtggacgcctacgtgccactctttagccgcgacatgaacaccttcaa 598 |||||||||||||| |||||||||||||||||||| |||| ||||||| |||||||||| Sbjct: 13980 cggcgacggcagcgtcgacgcctacgtgccactcttcagccacgacatggacaccttcaa 13921 Query: 599 gaactgctgcta 610 |||||||||||| Sbjct: 13920 gaactgctgcta 13909 Score = 44.1 bits (22), Expect = 0.54 Identities = 35/38 (92%), Gaps = 1/38 (2%) Strand = Plus / Minus Query: 3 gggagttcatctccaagnctcaaggcgcaggcgtcggc 40 ||||||||||||||||| |||||||||| |||||||| Sbjct: 14518 gggagttcatctccaag-ctcaaggcgctcgcgtcggc 14482
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 726 bits (366), Expect = 0.0 Identities = 550/610 (90%), Gaps = 1/610 (0%) Strand = Plus / Plus Query: 2 cgggagttcatctccaagnctcaaggcgcaggcgtcggctggcgcgcccagaccctgcag 61 ||||| |||||||| ||| |||||| ||||||||||||||||||||| | | || | ||| Sbjct: 33960092 cgggaattcatctcgaag-ctcaagtcgcaggcgtcggctggcgcgcaccggccgtacag 33960150 Query: 62 caccctgcagtgcgtggtggcacacctgtggcggagcatgacgatggcgcgcgggctcga 121 ||| ||||||||||||||||| ||||||||||| ||||||||| ||| ||||||||||| Sbjct: 33960151 cacgctgcagtgcgtggtggcgcacctgtggcgatgcatgacgaaggcacgcgggctcga 33960210 Query: 122 cggcggggagaccaccagcgtcgccatcgccgtggacgggagagcgcggatgagcccgca 181 ||| | ||| |||||||||| ||||||||| |||||| | |||||||||||||||| Sbjct: 33960211 cgggcgcgagtccaccagcgtgtgcatcgccgtcgacgggcgcgcgcggatgagcccgcc 33960270 Query: 182 ggtgccggacggatacaccggcaacgtcatcctctgggcgcggccaaccaccacggcggg 241 |||||||||||| ||||| ||||| ||| | |||||||||||||||||| | ||||| || Sbjct: 33960271 ggtgccggacggctacacgggcaatgtcgtgctctgggcgcggccaaccgcgacggccgg 33960330 Query: 242 ggagctcgtgaccaggccggtgaagcacgccgtggagctcatcagcagggaggtggcccg 301 ||||| |||||||||||| |||||||||||||||||||||||| | |||||||| ||| Sbjct: 33960331 tgagctggtgaccaggccgctgaagcacgccgtggagctcatcaaccgggaggtgatccg 33960390 Query: 302 gatcaacgatggctacttcaagtccttcatcgacttcgccaactccggcgcggtggagaa 361 ||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||| | Sbjct: 33960391 gatcaacgacggctacttcaagtcgttcatcgacttcgccaactccggtgcggtggagga 33960450 Query: 362 ggagcggctggtggcgacggccgacgcggcggacatggtgctgagccccaacatcgaggt 421 |||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 33960451 ggagcggctggtggcgtcggccgacgcggcggagatggtgctgagcccgaacatcgaggt 33960510 Query: 422 ggacagctggctgcggatcccgttctacgacatggacttcggcggcgggcggccattctt 481 ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 33960511 ggacagctggctgcggatcccgttctacgacctcgacttcggcggcgggcggccattctt 33960570 Query: 482 cttcatgcccagctacctgccggtggagggtctgctcatcctgctgccgtctttcttggg 541 ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| || Sbjct: 33960571 cttcatgcccagctacctgccggtggaaggtttgctcatcctgctgccgtctttcttcgg 33960630 Query: 542 cgacggcagcgtggacgcctacgtgccactctttagccgcgacatgaacaccttcaagaa 601 |||||| ||||| ||||| |||||||||||||| |||||||||||| || ||||||||| Sbjct: 33960631 cgacgggagcgttgacgcgtacgtgccactcttcagccgcgacatggacgtcttcaagaa 33960690 Query: 602 ctgctgctac 611 |||||||||| Sbjct: 33960691 ctgctgctac 33960700 Score = 579 bits (292), Expect = e-162 Identities = 487/552 (88%) Strand = Plus / Minus Query: 59 cagcaccctgcagtgcgtggtggcacacctgtggcggagcatgacgatggcgcgcgggct 118 |||||||||||||||||||||||| ||||||||||| |||| |||||||| |||||||| Sbjct: 33963563 cagcaccctgcagtgcgtggtggcgcacctgtggcgctgcataacgatggctcgcgggct 33963504 Query: 119 cgacggcggggagaccaccagcgtcgccatcgccgtggacgggagagcgcggatgagccc 178 ||| || | | | |||| ||||| ||||||||||||||||| | |||||||||||||| Sbjct: 33963503 cgaggggagcgtggccacgagcgtgtccatcgccgtggacgggcgcgcgcggatgagccc 33963444 Query: 179 gcaggtgccggacggatacaccggcaacgtcatcctctgggcgcggccaaccaccacggc 238 || ||||| ||| || ||||| ||||||||| | |||||||| ||||| ||| |||| || Sbjct: 33963443 gccggtgctggatggctacacgggcaacgtcgtgctctgggcacggccgaccgccaccgc 33963384 Query: 239 gggggagctcgtgaccaggccggtgaagcacgccgtggagctcatcagcagggaggtggc 298 | ||||||||||||||| |||| || ||||||| ||| ||||||| | ||| |||||| Sbjct: 33963383 gcgggagctcgtgaccatgccgctgcagcacgcgatgggtctcatcaaccgggcggtggc 33963324 Query: 299 ccggatcaacgatggctacttcaagtccttcatcgacttcgccaactccggcgcggtgga 358 ||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 33963323 acggatcaacgacggctacttcaagtcgttcgtcgacttcgccaactccggcgcggtgga 33963264 Query: 359 gaaggagcggctggtggcgacggccgacgcggcggacatggtgctgagccccaacatcga 418 | ||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||| Sbjct: 33963263 ggaggagcggctggtggcgtcggccgacgcggcggagatggtgctgagcccgaacatcga 33963204 Query: 419 ggtggacagctggctgcggatcccgttctacgacatggacttcggcggcgggcggccatt 478 ||||||||||||||||||||||||||||||||| | ||||||||| |||| | |||||| Sbjct: 33963203 ggtggacagctggctgcggatcccgttctacgagcttgacttcggcagcggccagccatt 33963144 Query: 479 cttcttcatgcccagctacctgccggtggagggtctgctcatcctgctgccgtctttctt 538 | | |||| ||| ||||||||||||||||||||||| |||||||| ||||| ||||||| Sbjct: 33963143 cctgttcacgcctagctacctgccggtggagggtcttctcatcctcctgccatctttctc 33963084 Query: 539 gggcgacggcagcgtggacgcctacgtgccactctttagccgcgacatgaacaccttcaa 598 |||||||||||||| |||||||||||||||||||| |||| ||||||| |||||||||| Sbjct: 33963083 cggcgacggcagcgtcgacgcctacgtgccactcttcagccacgacatggacaccttcaa 33963024 Query: 599 gaactgctgcta 610 |||||||||||| Sbjct: 33963023 gaactgctgcta 33963012 Score = 44.1 bits (22), Expect = 0.54 Identities = 35/38 (92%), Gaps = 1/38 (2%) Strand = Plus / Minus Query: 3 gggagttcatctccaagnctcaaggcgcaggcgtcggc 40 ||||||||||||||||| |||||||||| |||||||| Sbjct: 33963621 gggagttcatctccaag-ctcaaggcgctcgcgtcggc 33963585
>dbj|AK109743.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-E07, full insert sequence Length = 1640 Score = 726 bits (366), Expect = 0.0 Identities = 550/610 (90%), Gaps = 1/610 (0%) Strand = Plus / Plus Query: 2 cgggagttcatctccaagnctcaaggcgcaggcgtcggctggcgcgcccagaccctgcag 61 ||||| |||||||| ||| |||||| ||||||||||||||||||||| | | || | ||| Sbjct: 803 cgggaattcatctcgaag-ctcaagtcgcaggcgtcggctggcgcgcaccggccgtacag 861 Query: 62 caccctgcagtgcgtggtggcacacctgtggcggagcatgacgatggcgcgcgggctcga 121 ||| ||||||||||||||||| ||||||||||| ||||||||| ||| ||||||||||| Sbjct: 862 cacgctgcagtgcgtggtggcgcacctgtggcgatgcatgacgaaggcacgcgggctcga 921 Query: 122 cggcggggagaccaccagcgtcgccatcgccgtggacgggagagcgcggatgagcccgca 181 ||| | ||| |||||||||| ||||||||| |||||| | |||||||||||||||| Sbjct: 922 cgggcgcgagtccaccagcgtgtgcatcgccgtcgacgggcgcgcgcggatgagcccgcc 981 Query: 182 ggtgccggacggatacaccggcaacgtcatcctctgggcgcggccaaccaccacggcggg 241 |||||||||||| ||||| ||||| ||| | |||||||||||||||||| | ||||| || Sbjct: 982 ggtgccggacggctacacgggcaatgtcgtgctctgggcgcggccaaccgcgacggccgg 1041 Query: 242 ggagctcgtgaccaggccggtgaagcacgccgtggagctcatcagcagggaggtggcccg 301 ||||| |||||||||||| |||||||||||||||||||||||| | |||||||| ||| Sbjct: 1042 tgagctggtgaccaggccgctgaagcacgccgtggagctcatcaaccgggaggtgatccg 1101 Query: 302 gatcaacgatggctacttcaagtccttcatcgacttcgccaactccggcgcggtggagaa 361 ||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||| | Sbjct: 1102 gatcaacgacggctacttcaagtcgttcatcgacttcgccaactccggtgcggtggagga 1161 Query: 362 ggagcggctggtggcgacggccgacgcggcggacatggtgctgagccccaacatcgaggt 421 |||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 1162 ggagcggctggtggcgtcggccgacgcggcggagatggtgctgagcccgaacatcgaggt 1221 Query: 422 ggacagctggctgcggatcccgttctacgacatggacttcggcggcgggcggccattctt 481 ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 1222 ggacagctggctgcggatcccgttctacgacctcgacttcggcggcgggcggccattctt 1281 Query: 482 cttcatgcccagctacctgccggtggagggtctgctcatcctgctgccgtctttcttggg 541 ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| || Sbjct: 1282 cttcatgcccagctacctgccggtggaaggtttgctcatcctgctgccgtctttcttcgg 1341 Query: 542 cgacggcagcgtggacgcctacgtgccactctttagccgcgacatgaacaccttcaagaa 601 |||||| ||||| ||||| |||||||||||||| |||||||||||| || ||||||||| Sbjct: 1342 cgacgggagcgttgacgcgtacgtgccactcttcagccgcgacatggacgtcttcaagaa 1401 Query: 602 ctgctgctac 611 |||||||||| Sbjct: 1402 ctgctgctac 1411
>ref|XM_474244.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1350 Score = 579 bits (292), Expect = e-162 Identities = 487/552 (88%) Strand = Plus / Plus Query: 59 cagcaccctgcagtgcgtggtggcacacctgtggcggagcatgacgatggcgcgcgggct 118 |||||||||||||||||||||||| ||||||||||| |||| |||||||| |||||||| Sbjct: 777 cagcaccctgcagtgcgtggtggcgcacctgtggcgctgcataacgatggctcgcgggct 836 Query: 119 cgacggcggggagaccaccagcgtcgccatcgccgtggacgggagagcgcggatgagccc 178 ||| || | | | |||| ||||| ||||||||||||||||| | |||||||||||||| Sbjct: 837 cgaggggagcgtggccacgagcgtgtccatcgccgtggacgggcgcgcgcggatgagccc 896 Query: 179 gcaggtgccggacggatacaccggcaacgtcatcctctgggcgcggccaaccaccacggc 238 || ||||| ||| || ||||| ||||||||| | |||||||| ||||| ||| |||| || Sbjct: 897 gccggtgctggatggctacacgggcaacgtcgtgctctgggcacggccgaccgccaccgc 956 Query: 239 gggggagctcgtgaccaggccggtgaagcacgccgtggagctcatcagcagggaggtggc 298 | ||||||||||||||| |||| || ||||||| ||| ||||||| | ||| |||||| Sbjct: 957 gcgggagctcgtgaccatgccgctgcagcacgcgatgggtctcatcaaccgggcggtggc 1016 Query: 299 ccggatcaacgatggctacttcaagtccttcatcgacttcgccaactccggcgcggtgga 358 ||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 1017 acggatcaacgacggctacttcaagtcgttcgtcgacttcgccaactccggcgcggtgga 1076 Query: 359 gaaggagcggctggtggcgacggccgacgcggcggacatggtgctgagccccaacatcga 418 | ||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||| Sbjct: 1077 ggaggagcggctggtggcgtcggccgacgcggcggagatggtgctgagcccgaacatcga 1136 Query: 419 ggtggacagctggctgcggatcccgttctacgacatggacttcggcggcgggcggccatt 478 ||||||||||||||||||||||||||||||||| | ||||||||| |||| | |||||| Sbjct: 1137 ggtggacagctggctgcggatcccgttctacgagcttgacttcggcagcggccagccatt 1196 Query: 479 cttcttcatgcccagctacctgccggtggagggtctgctcatcctgctgccgtctttctt 538 | | |||| ||| ||||||||||||||||||||||| |||||||| ||||| ||||||| Sbjct: 1197 cctgttcacgcctagctacctgccggtggagggtcttctcatcctcctgccatctttctc 1256 Query: 539 gggcgacggcagcgtggacgcctacgtgccactctttagccgcgacatgaacaccttcaa 598 |||||||||||||| |||||||||||||||||||| |||| ||||||| |||||||||| Sbjct: 1257 cggcgacggcagcgtcgacgcctacgtgccactcttcagccacgacatggacaccttcaa 1316 Query: 599 gaactgctgcta 610 |||||||||||| Sbjct: 1317 gaactgctgcta 1328 Score = 44.1 bits (22), Expect = 0.54 Identities = 35/38 (92%), Gaps = 1/38 (2%) Strand = Plus / Plus Query: 3 gggagttcatctccaagnctcaaggcgcaggcgtcggc 40 ||||||||||||||||| |||||||||| |||||||| Sbjct: 719 gggagttcatctccaag-ctcaaggcgctcgcgtcggc 755
>gb|AC078977.6| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0496H07, complete sequence Length = 164477 Score = 48.1 bits (24), Expect = 0.034 Identities = 60/72 (83%) Strand = Plus / Minus Query: 398 ggtgctgagccccaacatcgaggtggacagctggctgcggatcccgttctacgacatgga 457 ||||||| |||| || |||||||||||||||||||| | ||| |||||||| | || Sbjct: 76785 ggtgctgtgcccggacgtcgaggtggacagctggctgggcatcgacttctacgagctcga 76726 Query: 458 cttcggcggcgg 469 |||||||||||| Sbjct: 76725 cttcggcggcgg 76714
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 48.1 bits (24), Expect = 0.034 Identities = 60/72 (83%) Strand = Plus / Minus Query: 398 ggtgctgagccccaacatcgaggtggacagctggctgcggatcccgttctacgacatgga 457 ||||||| |||| || |||||||||||||||||||| | ||| |||||||| | || Sbjct: 872361 ggtgctgtgcccggacgtcgaggtggacagctggctgggcatcgacttctacgagctcga 872302 Query: 458 cttcggcggcgg 469 |||||||||||| Sbjct: 872301 cttcggcggcgg 872290
>ref|XM_450191.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1359 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Plus Query: 399 gtgctgagccccaacatcgaggtggacagctggctgcggatcccgttctacgacatggac 458 |||||| ||||| || | ||||||||||||||||| ||||||||||||| | ||| Sbjct: 1135 gtgctgtgccccgacctggaggtggacagctggctcaccttcccgttctacgagctcgac 1194 Query: 459 ttcggcggcgg 469 ||||||||||| Sbjct: 1195 ttcggcggcgg 1205
>ref|XM_469315.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1389 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 540 ggcgacggcagcgtggacgcctacgtgccactctt 574 |||||||||||| | |||| ||||||||||||||| Sbjct: 1306 ggcgacggcagcatcgacgtctacgtgccactctt 1340 Score = 44.1 bits (22), Expect = 0.54 Identities = 49/58 (84%) Strand = Plus / Plus Query: 412 acatcgaggtggacagctggctgcggatcccgttctacgacatggacttcggcggcgg 469 |||| |||||||||||||||||| | || ||||||||| | |||||||||||||| Sbjct: 1178 acatggaggtggacagctggctgggcatgagcttctacgacctcgacttcggcggcgg 1235
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 540 ggcgacggcagcgtggacgcctacgtgccactctt 574 |||||||||||| | |||| ||||||||||||||| Sbjct: 26918657 ggcgacggcagcatcgacgtctacgtgccactctt 26918691 Score = 44.1 bits (22), Expect = 0.54 Identities = 49/58 (84%) Strand = Plus / Plus Query: 412 acatcgaggtggacagctggctgcggatcccgttctacgacatggacttcggcggcgg 469 |||| |||||||||||||||||| | || ||||||||| | |||||||||||||| Sbjct: 26918529 acatggaggtggacagctggctgggcatgagcttctacgacctcgacttcggcggcgg 26918586
>gb|AC087412.14| Oryza sativa chromosome 3 BAC OSJNBb0070O09 genomic sequence, complete sequence Length = 149303 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 540 ggcgacggcagcgtggacgcctacgtgccactctt 574 |||||||||||| | |||| ||||||||||||||| Sbjct: 97657 ggcgacggcagcatcgacgtctacgtgccactctt 97691 Score = 44.1 bits (22), Expect = 0.54 Identities = 49/58 (84%) Strand = Plus / Plus Query: 412 acatcgaggtggacagctggctgcggatcccgttctacgacatggacttcggcggcgg 469 |||| |||||||||||||||||| | || ||||||||| | |||||||||||||| Sbjct: 97529 acatggaggtggacagctggctgggcatgagcttctacgacctcgacttcggcggcgg 97586
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Plus Query: 399 gtgctgagccccaacatcgaggtggacagctggctgcggatcccgttctacgacatggac 458 |||||| ||||| || | ||||||||||||||||| ||||||||||||| | ||| Sbjct: 21163442 gtgctgtgccccgacctggaggtggacagctggctcaccttcccgttctacgagctcgac 21163501 Query: 459 ttcggcggcgg 469 ||||||||||| Sbjct: 21163502 ttcggcggcgg 21163512
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 540 ggcgacggcagcgtggacgcctacgtgccactctt 574 |||||||||||| | |||| ||||||||||||||| Sbjct: 27009980 ggcgacggcagcatcgacgtctacgtgccactctt 27010014 Score = 44.1 bits (22), Expect = 0.54 Identities = 49/58 (84%) Strand = Plus / Plus Query: 412 acatcgaggtggacagctggctgcggatcccgttctacgacatggacttcggcggcgg 469 |||| |||||||||||||||||| | || ||||||||| | |||||||||||||| Sbjct: 27009852 acatggaggtggacagctggctgggcatgagcttctacgacctcgacttcggcggcgg 27009909
>dbj|AP006548.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone: P0705E11 Length = 140729 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Plus Query: 399 gtgctgagccccaacatcgaggtggacagctggctgcggatcccgttctacgacatggac 458 |||||| ||||| || | ||||||||||||||||| ||||||||||||| | ||| Sbjct: 34199 gtgctgtgccccgacctggaggtggacagctggctcaccttcccgttctacgagctcgac 34258 Query: 459 ttcggcggcgg 469 ||||||||||| Sbjct: 34259 ttcggcggcgg 34269
>gb|AC073308.4| Homo sapiens BAC clone RP11-13M3 from 7, complete sequence Length = 154344 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 gcgtggtggcacacctgtggc 93 ||||||||||||||||||||| Sbjct: 90359 gcgtggtggcacacctgtggc 90379
>gb|AC126676.3| Mus musculus BAC clone RP23-445H7 from chromosome 7, complete sequence Length = 190059 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 91 ggcggagcatgacgatggcgc 111 ||||||||||||||||||||| Sbjct: 88130 ggcggagcatgacgatggcgc 88150
>emb|AL365215.23| Human DNA sequence from clone RP11-416D8 on chromosome 10 Contains the 5' end of the RSU1 gene for Ras suppressor protein 1, the 3' end of the CUBN gene for cubilin (intrinsic factor-cobalamin receptor) and a CpG island, complete sequence Length = 184703 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 399 gtgctgagccccaacatcgag 419 ||||||||||||||||||||| Sbjct: 51810 gtgctgagccccaacatcgag 51790
>emb|BX027057.1|CNS08T1H Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA40CC11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 279 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 368 gctggtggcgacggccgacgc 388 ||||||||||||||||||||| Sbjct: 111 gctggtggcgacggccgacgc 131
>emb|AL939116.1|SCO939116 Streptomyces coelicolor A3(2) complete genome; segment 13/29 Length = 293050 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 116 gctcgacggcggggagaccaccagc 140 ||||||||||| ||||||||||||| Sbjct: 128084 gctcgacggcgtggagaccaccagc 128060
>emb|BX546502.7| Zebrafish DNA sequence from clone RP71-62P22 in linkage group 25, complete sequence Length = 169168 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 362 ggagcggctggtggcgacggc 382 ||||||||||||||||||||| Sbjct: 100074 ggagcggctggtggcgacggc 100054
>dbj|AK153693.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630048N10 product:unclassifiable, full insert sequence Length = 4685 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 91 ggcggagcatgacgatggcgc 111 ||||||||||||||||||||| Sbjct: 3436 ggcggagcatgacgatggcgc 3456
>ref|XM_315590.2| Anopheles gambiae str. PEST ENSANGP00000017720 (ENSANGG00000015231), partial mRNA Length = 966 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 368 gctggtggcgacggccgacgc 388 ||||||||||||||||||||| Sbjct: 840 gctggtggcgacggccgacgc 820
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 cgatggcgcgcgggctcgac 122 |||||||||||||||||||| Sbjct: 165981 cgatggcgcgcgggctcgac 166000
>gb|AF025467.1| Caenorhabditis elegans cosmid R148, complete sequence Length = 37154 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 520 tcctgctgccgtctttcttg 539 |||||||||||||||||||| Sbjct: 2418 tcctgctgccgtctttcttg 2399
>gb|AE007288.1| Sinorhizobium meliloti 1021 plasmid pSymA section 94 of 121 of the complete plasmid sequence Length = 10943 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 366 cggctggtggcgacggccga 385 |||||||||||||||||||| Sbjct: 2742 cggctggtggcgacggccga 2761
>gb|AY577002.1| Danio rerio clone RZ150A4A11 C22orf4-like protein mRNA, complete cds Length = 2068 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 520 tcctgctgccgtctttcttg 539 |||||||||||||||||||| Sbjct: 391 tcctgctgccgtctttcttg 372
>emb|AJ231133.1|SOF231133 Saccharum officinarum mRNA for caffeic acid 3-O-methyltransferase Length = 1486 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 ccgacgcggcggacatggtg 401 |||||||||||||||||||| Sbjct: 316 ccgacgcggcggacatggtg 335
>gb|AY365419.1| Saccharum hybrid cultivar caffeic acid 3-O-methyltransferase (COMT) gene, complete cds Length = 2012 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 ccgacgcggcggacatggtg 401 |||||||||||||||||||| Sbjct: 212 ccgacgcggcggacatggtg 231
>emb|AL390879.20| Human DNA sequence from clone RP11-308D16 on chromosome Xq25-27.1 Contains the 3' end of a novel gene, a serine/arginine repetitive matrix 1 (SRRM1) pseudogene (LOC347480), the GPR101 gene for G protein-coupled receptor 101 and four CpG islands, complete sequence Length = 172280 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 gcgtggtggcacacctgtgg 92 |||||||||||||||||||| Sbjct: 33865 gcgtggtggcacacctgtgg 33884
>emb|AL157945.21| Human DNA sequence from clone RP4-628J24 on chromosome 1p36.31-36.33 Contains the 3' end of a novel gene and a novel gene, complete sequence Length = 39094 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 gcgtggtggcacacctgtgg 92 |||||||||||||||||||| Sbjct: 1908 gcgtggtggcacacctgtgg 1889
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 104 gatggcgcgcgggctcgacggcgg 127 ||||||||| |||||||||||||| Sbjct: 2589498 gatggcgcgtgggctcgacggcgg 2589475
>emb|AJ862840.1| Streptomyces griseus subsp. griseus streptomycin gene cluster, strain DSM 40236 Length = 90600 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 cttcgccaactccggcgcgg 354 |||||||||||||||||||| Sbjct: 67443 cttcgccaactccggcgcgg 67462
>emb|BX294147.1| Pirellula sp. strain 1 complete genome; segment 15/24 Length = 314450 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 atcaacgatggctacttcaa 322 |||||||||||||||||||| Sbjct: 74886 atcaacgatggctacttcaa 74867
>gb|AE012420.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 328 of 460 of the complete genome Length = 13708 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 cgcgcccagaccctgcagca 63 |||||||||||||||||||| Sbjct: 7837 cgcgcccagaccctgcagca 7818
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 cgcccagaccctgcagcacc 65 |||||||||||||||||||| Sbjct: 4462729 cgcccagaccctgcagcacc 4462748
>gb|AC034111.6| Homo sapiens, clone RP11-1E4, complete sequence Length = 177756 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 gcgtggtggcacacctgtgg 92 |||||||||||||||||||| Sbjct: 60888 gcgtggtggcacacctgtgg 60869
>gb|AC021220.7| Homo sapiens BAC clone RP11-530I17 from 4, complete sequence Length = 173794 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 gcgtggtggcacacctgtgg 92 |||||||||||||||||||| Sbjct: 9285 gcgtggtggcacacctgtgg 9266
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 cgcgcccagaccctgcagca 63 |||||||||||||||||||| Sbjct: 1329195 cgcgcccagaccctgcagca 1329214
>ref|NM_181961.1| Caenorhabditis elegans R148.5b (R148.5) mRNA, complete cds Length = 1518 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 520 tcctgctgccgtctttcttg 539 |||||||||||||||||||| Sbjct: 656 tcctgctgccgtctttcttg 637
>ref|NM_065264.3| Caenorhabditis elegans R148.5a (R148.5) mRNA, complete cds Length = 1848 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 520 tcctgctgccgtctttcttg 539 |||||||||||||||||||| Sbjct: 656 tcctgctgccgtctttcttg 637
>ref|NM_214799.1| Danio rerio zgc:101677 (zgc:101677), mRNA Length = 2068 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 520 tcctgctgccgtctttcttg 539 |||||||||||||||||||| Sbjct: 391 tcctgctgccgtctttcttg 372
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 370 tggtggcgacggccgacgcggcgg 393 |||||||||||| ||||||||||| Sbjct: 29600726 tggtggcgacgggcgacgcggcgg 29600703
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 338 cgccaactccggcgcggtggagaa 361 ||||| |||||||||||||||||| Sbjct: 3905713 cgccacctccggcgcggtggagaa 3905736
>dbj|AP004329.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1663_H12 Length = 125422 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 370 tggtggcgacggccgacgcggcgg 393 |||||||||||| ||||||||||| Sbjct: 44311 tggtggcgacgggcgacgcggcgg 44288
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 gcggggagaccaccagcgtc 143 |||||||||||||||||||| Sbjct: 2494430 gcggggagaccaccagcgtc 2494449
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 cttcgccaactccggcgcgg 354 |||||||||||||||||||| Sbjct: 5074037 cttcgccaactccggcgcgg 5074056 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 caccagcgtcgccatcgccg 153 |||||||||||||||||||| Sbjct: 971985 caccagcgtcgccatcgccg 971966
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 196 acaccggcaacgtcatcctctggg 219 ||||||||||||||||| |||||| Sbjct: 1691821 acaccggcaacgtcatcgtctggg 1691798
>dbj|AP003634.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0655A07 Length = 172473 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 370 tggtggcgacggccgacgcggcgg 393 |||||||||||| ||||||||||| Sbjct: 165232 tggtggcgacgggcgacgcggcgg 165209
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 agcccgcaggtgccggacgg 193 |||||||||||||||||||| Sbjct: 914615 agcccgcaggtgccggacgg 914634
>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome Length = 5411809 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 316 acttcaagtccttcatcgacttcg 339 ||||||||||||||||| |||||| Sbjct: 1462654 acttcaagtccttcatctacttcg 1462631 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,333,006 Number of Sequences: 3902068 Number of extensions: 4333006 Number of successful extensions: 108389 Number of sequences better than 10.0: 52 Number of HSP's better than 10.0 without gapping: 50 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 106337 Number of HSP's gapped (non-prelim): 2044 length of query: 616 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 593 effective length of database: 17,143,297,704 effective search space: 10165975538472 effective search space used: 10165975538472 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
