>ref|NM_183995.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2253

 Score =  133 bits (67), Expect = 6e-28
 Identities = 177/214 (82%)
 Strand = Plus / Plus

                                                                        
Query: 1    aggatgcagtctttgtgctcctcttatgcacggcnatcgcacgaacaatgacagagatca 60
            |||||||||| |||||||| ||| | |||| ||| ||||||||||| ||||||||||| |
Sbjct: 1949 aggatgcagtttttgtgcttctcctgtgcatggcaatcgcacgaaccatgacagagatta 2008

                                                                        
Query: 61   gaagggaagatgtgtccgggcttctggtgcggcgaagaatgcgcgaaccacaggtagggc 120
            | || |||||||| || |||||| |||| || ||||||||  | ||| |  |||| ||||
Sbjct: 2009 ggagagaagatgtatctgggcttttggtacgacgaagaatatgtgaagcgaaggttgggc 2068

                                                                        
Query: 121  agagagactggggctcggtgatgctgccggacgcgccttcccttgaccctcatttgcagc 180
            ||||||||||||| || |||||||| ||  || | ||||| ||||| ||||||||||| |
Sbjct: 2069 agagagactggggttcagtgatgctcccaaactcaccttctcttgatcctcatttgcaac 2128

                                              
Query: 181  cgtggtaccggaatgcggcgcgtgttttgagctc 214
            ||||||| |||||||| |||| ||| || |||||
Sbjct: 2129 cgtggtatcggaatgcagcgcatgtattaagctc 2162



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                  
Query: 267  gatggcaaggatgagctgtacaggcaagctcttatacc 304
            ||||||||||||||| |||||||| |||||||||||||
Sbjct: 2212 gatggcaaggatgagttgtacaggaaagctcttatacc 2249

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  133 bits (67), Expect = 6e-28
 Identities = 177/214 (82%)
 Strand = Plus / Minus

                                                                            
Query: 1        aggatgcagtctttgtgctcctcttatgcacggcnatcgcacgaacaatgacagagatca 60
                |||||||||| |||||||| ||| | |||| ||| ||||||||||| ||||||||||| |
Sbjct: 13783473 aggatgcagtttttgtgcttctcctgtgcatggcaatcgcacgaaccatgacagagatta 13783414

                                                                            
Query: 61       gaagggaagatgtgtccgggcttctggtgcggcgaagaatgcgcgaaccacaggtagggc 120
                | || |||||||| || |||||| |||| || ||||||||  | ||| |  |||| ||||
Sbjct: 13783413 ggagagaagatgtatctgggcttttggtacgacgaagaatatgtgaagcgaaggttgggc 13783354

                                                                            
Query: 121      agagagactggggctcggtgatgctgccggacgcgccttcccttgaccctcatttgcagc 180
                ||||||||||||| || |||||||| ||  || | ||||| ||||| ||||||||||| |
Sbjct: 13783353 agagagactggggttcagtgatgctcccaaactcaccttctcttgatcctcatttgcaac 13783294

                                                  
Query: 181      cgtggtaccggaatgcggcgcgtgttttgagctc 214
                ||||||| |||||||| |||| ||| || |||||
Sbjct: 13783293 cgtggtatcggaatgcagcgcatgtattaagctc 13783260



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                      
Query: 267      gatggcaaggatgagctgtacaggcaagctcttatacc 304
                ||||||||||||||| |||||||| |||||||||||||
Sbjct: 13783210 gatggcaaggatgagttgtacaggaaagctcttatacc 13783173

>dbj|AP003205.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1146B04
          Length = 145186

 Score =  133 bits (67), Expect = 6e-28
 Identities = 177/214 (82%)
 Strand = Plus / Minus

                                                                          
Query: 1      aggatgcagtctttgtgctcctcttatgcacggcnatcgcacgaacaatgacagagatca 60
              |||||||||| |||||||| ||| | |||| ||| ||||||||||| ||||||||||| |
Sbjct: 121801 aggatgcagtttttgtgcttctcctgtgcatggcaatcgcacgaaccatgacagagatta 121742

                                                                          
Query: 61     gaagggaagatgtgtccgggcttctggtgcggcgaagaatgcgcgaaccacaggtagggc 120
              | || |||||||| || |||||| |||| || ||||||||  | ||| |  |||| ||||
Sbjct: 121741 ggagagaagatgtatctgggcttttggtacgacgaagaatatgtgaagcgaaggttgggc 121682

                                                                          
Query: 121    agagagactggggctcggtgatgctgccggacgcgccttcccttgaccctcatttgcagc 180
              ||||||||||||| || |||||||| ||  || | ||||| ||||| ||||||||||| |
Sbjct: 121681 agagagactggggttcagtgatgctcccaaactcaccttctcttgatcctcatttgcaac 121622

                                                
Query: 181    cgtggtaccggaatgcggcgcgtgttttgagctc 214
              ||||||| |||||||| |||| ||| || |||||
Sbjct: 121621 cgtggtatcggaatgcagcgcatgtattaagctc 121588



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                    
Query: 267    gatggcaaggatgagctgtacaggcaagctcttatacc 304
              ||||||||||||||| |||||||| |||||||||||||
Sbjct: 121538 gatggcaaggatgagttgtacaggaaagctcttatacc 121501

>dbj|AP003852.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0440D10
          Length = 144340

 Score =  133 bits (67), Expect = 6e-28
 Identities = 177/214 (82%)
 Strand = Plus / Minus

                                                                         
Query: 1     aggatgcagtctttgtgctcctcttatgcacggcnatcgcacgaacaatgacagagatca 60
             |||||||||| |||||||| ||| | |||| ||| ||||||||||| ||||||||||| |
Sbjct: 20876 aggatgcagtttttgtgcttctcctgtgcatggcaatcgcacgaaccatgacagagatta 20817

                                                                         
Query: 61    gaagggaagatgtgtccgggcttctggtgcggcgaagaatgcgcgaaccacaggtagggc 120
             | || |||||||| || |||||| |||| || ||||||||  | ||| |  |||| ||||
Sbjct: 20816 ggagagaagatgtatctgggcttttggtacgacgaagaatatgtgaagcgaaggttgggc 20757

                                                                         
Query: 121   agagagactggggctcggtgatgctgccggacgcgccttcccttgaccctcatttgcagc 180
             ||||||||||||| || |||||||| ||  || | ||||| ||||| ||||||||||| |
Sbjct: 20756 agagagactggggttcagtgatgctcccaaactcaccttctcttgatcctcatttgcaac 20697

                                               
Query: 181   cgtggtaccggaatgcggcgcgtgttttgagctc 214
             ||||||| |||||||| |||| ||| || |||||
Sbjct: 20696 cgtggtatcggaatgcagcgcatgtattaagctc 20663



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                   
Query: 267   gatggcaaggatgagctgtacaggcaagctcttatacc 304
             ||||||||||||||| |||||||| |||||||||||||
Sbjct: 20613 gatggcaaggatgagttgtacaggaaagctcttatacc 20576

>dbj|AK100716.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023115O05, full
            insert sequence
          Length = 2688

 Score =  133 bits (67), Expect = 6e-28
 Identities = 177/214 (82%)
 Strand = Plus / Plus

                                                                        
Query: 1    aggatgcagtctttgtgctcctcttatgcacggcnatcgcacgaacaatgacagagatca 60
            |||||||||| |||||||| ||| | |||| ||| ||||||||||| ||||||||||| |
Sbjct: 2048 aggatgcagtttttgtgcttctcctgtgcatggcaatcgcacgaaccatgacagagatta 2107

                                                                        
Query: 61   gaagggaagatgtgtccgggcttctggtgcggcgaagaatgcgcgaaccacaggtagggc 120
            | || |||||||| || |||||| |||| || ||||||||  | ||| |  |||| ||||
Sbjct: 2108 ggagagaagatgtatctgggcttttggtacgacgaagaatatgtgaagcgaaggttgggc 2167

                                                                        
Query: 121  agagagactggggctcggtgatgctgccggacgcgccttcccttgaccctcatttgcagc 180
            ||||||||||||| || |||||||| ||  || | ||||| ||||| ||||||||||| |
Sbjct: 2168 agagagactggggttcagtgatgctcccaaactcaccttctcttgatcctcatttgcaac 2227

                                              
Query: 181  cgtggtaccggaatgcggcgcgtgttttgagctc 214
            ||||||| |||||||| |||| ||| || |||||
Sbjct: 2228 cgtggtatcggaatgcagcgcatgtattaagctc 2261



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                  
Query: 267  gatggcaaggatgagctgtacaggcaagctcttatacc 304
            ||||||||||||||| |||||||| |||||||||||||
Sbjct: 2311 gatggcaaggatgagttgtacaggaaagctcttatacc 2348

>gb|AC125097.3| Mus musculus BAC clone RP24-188J11 from chromosome 3, complete sequence
          Length = 178057

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 400    atttgttgttgtgtatggtttgttt 424
              |||||||||||||| ||||||||||
Sbjct: 130112 atttgttgttgtgtttggtttgttt 130136

>emb|Z83118.1|CEM04D5 Caenorhabditis elegans Cosmid M04D5, complete sequence
          Length = 18617

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 43    gaacaatgacagagatcagaaggg 66
             ||||||||||||||||||| ||||
Sbjct: 17498 gaacaatgacagagatcagcaggg 17521

>gb|AC102426.6| Mus musculus chromosome 1, clone RP24-88A10, complete sequence
          Length = 192016

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 403    tgttgttgtgtatggtttgtttgt 426
              ||||||||||||| ||||||||||
Sbjct: 181061 tgttgttgtgtattgtttgtttgt 181084

>emb|AL355504.17| Human DNA sequence from clone RP11-218A18 on chromosome 13 Contains a
             mitochondrial import receptor Tom22 pseudogene, complete
             sequence
          Length = 60159

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 218   ggagactgtgctgcctaaca 237
             ||||||||||||||||||||
Sbjct: 40019 ggagactgtgctgcctaaca 40000

>emb|AL139395.7| Human DNA sequence from clone RP11-130N24 on chromosome Xq13.3-21.2
              Contains the 3' end of gene KIAA2022, complete sequence
          Length = 146610

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 407    gttgtgtatggtttgtttgt 426
              ||||||||||||||||||||
Sbjct: 109370 gttgtgtatggtttgtttgt 109351

>emb|Z92540.1|HS179I15A Human DNA sequence from clone RP1-179I15 on chromosome 13. Contains a
             novel gene, a mitochondrial import receptor TOM22
             pseudogene, the 5' end of the KL gene for klotho, ESTs,
             STSs and a CpG island, complete sequence
          Length = 146810

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 218   ggagactgtgctgcctaaca 237
             ||||||||||||||||||||
Sbjct: 71786 ggagactgtgctgcctaaca 71767

>emb|BX901976.22| Zebrafish DNA sequence from clone DKEY-101P20 in linkage group 22,
              complete sequence
          Length = 201928

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 401    tttgttgttgtgtatggtttgttt 424
              ||||||||||||||| ||||||||
Sbjct: 115516 tttgttgttgtgtattgtttgttt 115539

>emb|AL662803.11| Mouse DNA sequence from clone RP23-215N10 on chromosome 11 Contains a
              novel gene, complete sequence
          Length = 155034

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 382    tcatctgaaaatggcttgat 401
              ||||||||||||||||||||
Sbjct: 129859 tcatctgaaaatggcttgat 129878

>emb|AL672013.9| Mouse DNA sequence from clone RP23-32G8 on chromosome 11 Contains the 3'
              end of the Ebf1 gene for early B-cell factor 1 and a novel
              gene, complete sequence
          Length = 207905

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 453    tgagtatattgtatgtaatt 472
              ||||||||||||||||||||
Sbjct: 139064 tgagtatattgtatgtaatt 139045

>emb|BX510999.11| Zebrafish DNA sequence from clone CH211-157P22 in linkage group 5,
             complete sequence
          Length = 160405

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 401   tttgttgttgtgtatggtttgttt 424
             |||| |||||||||||||||||||
Sbjct: 79211 tttgctgttgtgtatggtttgttt 79234

>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 131     gggctcggtgatgctgccgg 150
               ||||||||||||||||||||
Sbjct: 3571458 gggctcggtgatgctgccgg 3571439

>gb|AC111220.6| Rattus norvegicus Chr BAC CH230-122K11 (Children's Hospital Oakland
              Research Institute Rat (BN/SsNHsd/MCW) BAC library)
              complete sequence
          Length = 237466

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 1      aggatgcagtctttgtgctc 20
              ||||||||||||||||||||
Sbjct: 235571 aggatgcagtctttgtgctc 235590

>gb|AC109037.6| Rattus norvegicus 18 BAC CH230-178G23 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 208650

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      aggatgcagtctttgtgctc 20
              ||||||||||||||||||||
Sbjct: 110451 aggatgcagtctttgtgctc 110432

>ref|NM_060507.1| Caenorhabditis elegans F56G4.1 (F56G4.1) mRNA, complete cds
          Length = 2928

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 43  gaacaatgacagagatcagaaggg 66
           ||||||||||||||||||| ||||
Sbjct: 940 gaacaatgacagagatcagcaggg 917

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 458     atattgtatgtaattcagaa 477
               ||||||||||||||||||||
Sbjct: 2335344 atattgtatgtaattcagaa 2335325

>gb|AF167359.1|AF167359 Rumex acetosa expansin (EXP4) gene, partial cds
          Length = 901

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 194 tgcggcgcgtgttttgagctccgc 217
           |||||||||||||||||| |||||
Sbjct: 176 tgcggcgcgtgttttgagatccgc 199

>dbj|AP005473.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0077B15
          Length = 139345

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 458   atattgtatgtaattcagaa 477
             ||||||||||||||||||||
Sbjct: 38352 atattgtatgtaattcagaa 38333

>emb|BX248081.12| Zebrafish DNA sequence from clone CH211-106H11 in linkage group 16,
              complete sequence
          Length = 174325

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 462    tgtatgtaattcagaataat 481
              ||||||||||||||||||||
Sbjct: 148013 tgtatgtaattcagaataat 147994

>emb|AL953841.5| Zebrafish DNA sequence from clone DKEY-44G23 in linkage group 22,
              complete sequence
          Length = 219929

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 401    tttgttgttgtgtatggtttgttt 424
              ||||||||||||||| ||||||||
Sbjct: 153979 tttgttgttgtgtattgtttgttt 154002

>dbj|AP003824.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1343_B12
          Length = 121362

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 458    atattgtatgtaattcagaa 477
              ||||||||||||||||||||
Sbjct: 109043 atattgtatgtaattcagaa 109024

>gb|AC139316.4| Mus musculus BAC clone RP24-500I24 from 3, complete sequence
          Length = 187000

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 401   tttgttgttgtgtatggttt 420
             ||||||||||||||||||||
Sbjct: 18174 tttgttgttgtgtatggttt 18155


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,690,016
Number of Sequences: 3902068
Number of extensions: 3690016
Number of successful extensions: 71772
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71671
Number of HSP's gapped (non-prelim): 96
length of query: 511
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 488
effective length of database: 17,143,297,704
effective search space: 8365929279552
effective search space used: 8365929279552
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)