ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd19h02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK102473.1| Oryza sativa (japonica cultivar-group) cDNA clon... 470 e-129
2ref|NM_193728.1| Oryza sativa (japonica cultivar-group), predic... 400 e-108
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 270 5e-69
4dbj|AP003217.3| Oryza sativa (japonica cultivar-group) genomic D... 270 5e-69
5gb|AF514859.1| Oryza sativa (indica cultivar-group) ATP-dependen... 262 1e-66
6gb|AY109053.1| Zea mays PCO106983 mRNA sequence 224 3e-55
7gb|AY107538.1| Zea mays PCO073954 mRNA sequence 105 2e-19
8gb|AF450251.1|AF450251 Oryza sativa blast-resistant mRNA, partia... 94 7e-16
9gb|AY496111.1| Capsicum annuum ClpP putative protein mRNA, parti... 54 6e-04
10gb|L41144.1|BNACLPPA Brassica oleracea ClpP (clpP) mRNA, partial... 52 0.002
11gb|DQ158856.1| Bigelowiella natans nucleomorph chromosome 1, par... 46 0.14
12gb|CP000238.1| Baumannia cicadellinicola str. Hc (Homalodisca co... 46 0.14
13gb|AY267691.1| Bigelowiella natans ClpP protease mRNA, partial c... 46 0.14
14gb|DQ071229.1| Bigelowiella natans clone 3 clpP2 mRNA, partial s... 46 0.14
15gb|DQ071224.1| Bigelowiella natans clone 2 clpP2 mRNA, partial s... 46 0.14
16gb|DQ071217.1| Bigelowiella natans clone 4 clpP2 mRNA, partial s... 46 0.14
17gb|DP000002.1| Sminthopsis macroura target 1 genomic scaffold 44 0.56
18gb|AC123967.3| Sminthopsis macroura clone 102C13, complete sequence 44 0.56
19gb|AE009001.1| Agrobacterium tumefaciens str. C58 circular chrom... 42 2.2
20ref|XM_969571.1| PREDICTED: Tribolium castaneum similar to Putat... 42 2.2
21gb|DQ071215.1| Bigelowiella natans clpP2 mRNA, partial sequence 42 2.2
22gb|AC093283.3| Homo sapiens chromosome 5 clone RP11-428C6, compl... 42 2.2
23gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome 42 2.2
24gb|AC160835.2| Sequence of Xenopus tropicalis BAC clone ISB1-8A8... 42 2.2
25gb|AC149149.3| Xenopus tropicalis clone ISB-175F5, complete sequ... 42 2.2
26ref|XM_392540.2| PREDICTED: Apis mellifera similar to novel prot... 42 2.2
27ref|NM_123547.1| Arabidopsis thaliana protein prenyltransferase ... 40 8.7
28ref|NM_105338.2| Arabidopsis thaliana CLPP3; endopeptidase Clp A... 40 8.7
29ref|XM_638955.1| Dictyostelium discoideum TFIID subunit (DDB0231... 40 8.7
30gb|AC160016.2| Mus musculus BAC clone RP24-421D3 from chromosome... 40 8.7
31ref|XM_480351.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.7
32emb|CT009708.6| Mouse DNA sequence from clone RP23-82F10 on chro... 40 8.7
33gb|AC004912.2| Homo sapiens PAC clone RP5-871B15 from 7, complet... 40 8.7
34emb|CR694080.2|CNS0FYI4 Tetraodon nigroviridis full-length cDNA 40 8.7
35emb|CR678681.2|CNS0FMMD Tetraodon nigroviridis full-length cDNA 40 8.7
36emb|CR678052.2|CNS0FM57 Tetraodon nigroviridis full-length cDNA 40 8.7
37emb|CR674696.2|CNS0FJKE Tetraodon nigroviridis full-length cDNA 40 8.7
38emb|CR671456.2|CNS0FH2E Tetraodon nigroviridis full-length cDNA 40 8.7
39emb|CR670920.2|CNS0FGNI Tetraodon nigroviridis full-length cDNA 40 8.7
40emb|CR669971.2|CNS0FFX5 Tetraodon nigroviridis full-length cDNA 40 8.7
41emb|CR668522.2|CNS0FESW Tetraodon nigroviridis full-length cDNA 40 8.7
42emb|CR665602.2|CNS0FCJS Tetraodon nigroviridis full-length cDNA 40 8.7
43emb|CR663706.2|CNS0FB34 Tetraodon nigroviridis full-length cDNA 40 8.7
44emb|CR662211.2|CNS0F9XL Tetraodon nigroviridis full-length cDNA 40 8.7
45emb|CR661865.2|CNS0F9NZ Tetraodon nigroviridis full-length cDNA 40 8.7
46gb|AC142209.3| Homo sapiens chromosome 5 clone XXyac-ICRF4X137E6... 40 8.7
47dbj|AB190353.1| Brassica rapa BrSLGf2b, BrSLGf2a genes, complete... 40 8.7
48gb|AC108120.3| Homo sapiens chromosome 5 clone RP11-524L6, compl... 40 8.7
49gb|AC117385.3| Homo sapiens 3 BAC RP11-13I22 (Roswell Park Cance... 40 8.7
50gb|AC092946.7| Homo sapiens 3 BAC RP11-785G3 (Roswell Park Cance... 40 8.7
51gb|AC010240.7| Homo sapiens chromosome 5 clone CTC-350I8, comple... 40 8.7
52gb|AY072526.1| Arabidopsis thaliana ATP-dependent Clp protease (... 40 8.7
53gb|AC159023.4| Pan troglodytes BAC clone CH251-506L16 from chrom... 40 8.7
54gb|AC160131.2| Mus musculus BAC clone RP23-226D9 from chromosome... 40 8.7
55gb|AF370528.1|AF370528 Arabidopsis thaliana ATP-dependent Clp pr... 40 8.7
56dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.7
57emb|BX817427.1|CNS0ACFS Arabidopsis thaliana Full-length cDNA Co... 40 8.7
58gb|AC117070.2| Dictyostelium discoideum chromosome 2 map 2097701... 40 8.7
59gb|AY087349.1| Arabidopsis thaliana clone 34480 mRNA, complete s... 40 8.7
60gb|AE013218.1| Buchnera aphidicola str. Sg (Schizaphis graminum)... 40 8.7
61gb|AC097004.3| Papio anubis clone RP41-290N16, complete sequence 40 8.7
62gb|AC159743.4| Pan troglodytes BAC clone CH251-267D14 from chrom... 40 8.7
63dbj|AP003878.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.7
64dbj|AB016871.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 8.7
65dbj|AB022328.1| Arabidopsis thaliana mRNA for nClpP3 (nuclear en... 40 8.7
66dbj|AP004619.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.7
67ref|XM_308493.2| Anopheles gambiae str. PEST ENSANGP00000022800 ... 40 8.7
68gb|AF032123.1|AF032123 Arabidopsis thaliana clp protease (CLP) m... 40 8.7
69emb|AL023580.1|HS372K1 Human DNA sequence from clone RP3-372K1 o... 40 8.7
70emb|AL928539.4| Mouse DNA sequence from clone RP23-152D24 on chr... 40 8.7 
>dbj|AK102473.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094H09, full
           insert sequence
          Length = 1257

 Score =  470 bits (237), Expect = e-129
 Identities = 378/425 (88%)
 Strand = Plus / Plus

                                                                       
Query: 197 ctcgaggagttggacaccagcaacatgcttctccgccagcggatcatctttctcggctcc 256
           ||||||||| ||||||||| ||||||||| || |||||||| ||| |||| |||||||||
Sbjct: 294 ctcgaggagctggacaccaccaacatgctccttcgccagcgcatcgtcttcctcggctcc 353

                                                                       
Query: 257 ccggtggatgatttgaatgcggatcttatcaccagtcaactgttactattggatgcaaag 316
           |||||||||||| ||| ||| |||||||||| ||| ||||| || ||  |||||||  ||
Sbjct: 354 ccggtggatgatatgagtgctgatcttatcatcagccaactcttgctgctggatgctgag 413

                                                                       
Query: 317 gaccacacaaaggacatcaagttgtttattaattcacccggaggctccatcactgcagga 376
           ||  | || ||||||||||| ||||||||||| ||||| ||||||||||| || ||||||
Sbjct: 414 gataaaactaaggacatcaaattgtttattaactcacctggaggctccataacagcagga 473

                                                                       
Query: 377 atggggatttatgatgccatgaaattttgcaaggctgatatctcaaccgtttgctttgga 436
           |||||  |||||||||||||||||||||||||||||||||| ||||| || |||||||||
Sbjct: 474 atgggagtttatgatgccatgaaattttgcaaggctgatatatcaactgtctgctttgga 533

                                                                       
Query: 437 ttggcggcttccatgggtgcatttttgttagctgctgggacaaagggaaagagattttgc 496
            |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 534 ctggcggcttccatgggtgcatttttgctagctgctgggacaaaggggaagagattttgc 593

                                                                       
Query: 497 atgccaaatgcgagaattatgatccatcagccatcagggggagctggtgggaaggccaca 556
           ||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||
Sbjct: 594 atgcctaatgcgagaattatgatccatcaaccatcagggggtgctggtgggaaggtcaca 653

                                                                       
Query: 557 gagatgggattgcagataacagaaatgctctatgagaagataaagatcaacaagataatg 616
           ||||||||||| ||||||  ||| ||| | ||||||||||||||||||||||| ||| ||
Sbjct: 654 gagatgggattacagatacgagagatgatgtatgagaagataaagatcaacaaaatactg 713

                
Query: 617 tcaag 621
           |||||
Sbjct: 714 tcaag 718
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>ref|NM_193728.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 954

 Score =  400 bits (202), Expect = e-108
 Identities = 316/354 (89%)
 Strand = Plus / Plus

                                                                       
Query: 197 ctcgaggagttggacaccagcaacatgcttctccgccagcggatcatctttctcggctcc 256
           ||||||||| ||||||||| ||||||||| || |||||||| ||| |||| |||||||||
Sbjct: 199 ctcgaggagctggacaccaccaacatgctccttcgccagcgcatcgtcttcctcggctcc 258

                                                                       
Query: 257 ccggtggatgatttgaatgcggatcttatcaccagtcaactgttactattggatgcaaag 316
           |||||||||||| ||| ||| |||||||||| ||| ||||| || ||  |||||||  ||
Sbjct: 259 ccggtggatgatatgagtgctgatcttatcatcagccaactcttgctgctggatgctgag 318

                                                                       
Query: 317 gaccacacaaaggacatcaagttgtttattaattcacccggaggctccatcactgcagga 376
           ||  | || ||||||||||| ||||||||||| ||||| ||||||||||| || ||||||
Sbjct: 319 gataaaactaaggacatcaaattgtttattaactcacctggaggctccataacagcagga 378

                                                                       
Query: 377 atggggatttatgatgccatgaaattttgcaaggctgatatctcaaccgtttgctttgga 436
           |||||  |||||||||||||||||||||||||||||||||| ||||| || |||||||||
Sbjct: 379 atgggagtttatgatgccatgaaattttgcaaggctgatatatcaactgtctgctttgga 438

                                                                       
Query: 437 ttggcggcttccatgggtgcatttttgttagctgctgggacaaagggaaagagattttgc 496
            |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 439 ctggcggcttccatgggtgcatttttgctagctgctgggacaaaggggaagagattttgc 498

                                                                 
Query: 497 atgccaaatgcgagaattatgatccatcagccatcagggggagctggtgggaag 550
           ||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 499 atgcctaatgcgagaattatgatccatcaaccatcagggggtgctggtgggaag 552



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 61/69 (88%)
 Strand = Plus / Plus

                                                                       
Query: 553 cacagagatgggattgcagataacagaaatgctctatgagaagataaagatcaacaagat 612
           ||||||||||||||| ||||||  ||| ||| | ||||||||||||||||||||||| ||
Sbjct: 582 cacagagatgggattacagatacgagagatgatgtatgagaagataaagatcaacaaaat 641

                    
Query: 613 aatgtcaag 621
           | |||||||
Sbjct: 642 actgtcaag 650
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  270 bits (136), Expect = 5e-69
 Identities = 169/180 (93%)
 Strand = Plus / Plus

                                                                            
Query: 372      caggaatggggatttatgatgccatgaaattttgcaaggctgatatctcaaccgtttgct 431
                ||||||||||  |||||||||||||||||||||||||||||||||| ||||| || ||||
Sbjct: 17746815 caggaatgggagtttatgatgccatgaaattttgcaaggctgatatatcaactgtctgct 17746874

                                                                            
Query: 432      ttggattggcggcttccatgggtgcatttttgttagctgctgggacaaagggaaagagat 491
                ||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 17746875 ttggactggcggcttccatgggtgcatttttgctagctgctgggacaaaggggaagagat 17746934

                                                                            
Query: 492      tttgcatgccaaatgcgagaattatgatccatcagccatcagggggagctggtgggaagg 551
                |||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 17746935 tttgcatgcctaatgcgagaattatgatccatcaaccatcagggggtgctggtgggaagg 17746994



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 61/69 (88%)
 Strand = Plus / Plus

                                                                            
Query: 553      cacagagatgggattgcagataacagaaatgctctatgagaagataaagatcaacaagat 612
                ||||||||||||||| ||||||  ||| ||| | ||||||||||||||||||||||| ||
Sbjct: 17747325 cacagagatgggattacagatacgagagatgatgtatgagaagataaagatcaacaaaat 17747384

                         
Query: 613      aatgtcaag 621
                | |||||||
Sbjct: 17747385 actgtcaag 17747393



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 97/117 (82%)
 Strand = Plus / Plus

                                                                            
Query: 259      ggtggatgatttgaatgcggatcttatcaccagtcaactgttactattggatgcaaagga 318
                |||||||||| ||| ||| |||||||||| ||| ||||| || ||  |||||||  ||||
Sbjct: 17744131 ggtggatgatatgagtgctgatcttatcatcagccaactcttgctgctggatgctgagga 17744190

                                                                         
Query: 319      ccacacaaaggacatcaagttgtttattaattcacccggaggctccatcactgcagg 375
                  | || ||||||||||| ||||||||||| ||||| ||||||||||| || |||||
Sbjct: 17744191 taaaactaaggacatcaaattgtttattaactcacctggaggctccataacagcagg 17744247



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 58/65 (89%)
 Strand = Plus / Plus

                                                                            
Query: 197      ctcgaggagttggacaccagcaacatgcttctccgccagcggatcatctttctcggctcc 256
                ||||||||| ||||||||| ||||||||| || |||||||| ||| |||| |||||||||
Sbjct: 17742764 ctcgaggagctggacaccaccaacatgctccttcgccagcgcatcgtcttcctcggctcc 17742823

                     
Query: 257      ccggt 261
                |||||
Sbjct: 17742824 ccggt 17742828
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>dbj|AP003217.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0094H06
          Length = 147245

 Score =  270 bits (136), Expect = 5e-69
 Identities = 169/180 (93%)
 Strand = Plus / Plus

                                                                          
Query: 372    caggaatggggatttatgatgccatgaaattttgcaaggctgatatctcaaccgtttgct 431
              ||||||||||  |||||||||||||||||||||||||||||||||| ||||| || ||||
Sbjct: 128350 caggaatgggagtttatgatgccatgaaattttgcaaggctgatatatcaactgtctgct 128409

                                                                          
Query: 432    ttggattggcggcttccatgggtgcatttttgttagctgctgggacaaagggaaagagat 491
              ||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 128410 ttggactggcggcttccatgggtgcatttttgctagctgctgggacaaaggggaagagat 128469

                                                                          
Query: 492    tttgcatgccaaatgcgagaattatgatccatcagccatcagggggagctggtgggaagg 551
              |||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 128470 tttgcatgcctaatgcgagaattatgatccatcaaccatcagggggtgctggtgggaagg 128529



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 61/69 (88%)
 Strand = Plus / Plus

                                                                          
Query: 553    cacagagatgggattgcagataacagaaatgctctatgagaagataaagatcaacaagat 612
              ||||||||||||||| ||||||  ||| ||| | ||||||||||||||||||||||| ||
Sbjct: 128860 cacagagatgggattacagatacgagagatgatgtatgagaagataaagatcaacaaaat 128919

                       
Query: 613    aatgtcaag 621
              | |||||||
Sbjct: 128920 actgtcaag 128928



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 97/117 (82%)
 Strand = Plus / Plus

                                                                          
Query: 259    ggtggatgatttgaatgcggatcttatcaccagtcaactgttactattggatgcaaagga 318
              |||||||||| ||| ||| |||||||||| ||| ||||| || ||  |||||||  ||||
Sbjct: 125666 ggtggatgatatgagtgctgatcttatcatcagccaactcttgctgctggatgctgagga 125725

                                                                       
Query: 319    ccacacaaaggacatcaagttgtttattaattcacccggaggctccatcactgcagg 375
                | || ||||||||||| ||||||||||| ||||| ||||||||||| || |||||
Sbjct: 125726 taaaactaaggacatcaaattgtttattaactcacctggaggctccataacagcagg 125782



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 58/65 (89%)
 Strand = Plus / Plus

                                                                          
Query: 197    ctcgaggagttggacaccagcaacatgcttctccgccagcggatcatctttctcggctcc 256
              ||||||||| ||||||||| ||||||||| || |||||||| ||| |||| |||||||||
Sbjct: 124299 ctcgaggagctggacaccaccaacatgctccttcgccagcgcatcgtcttcctcggctcc 124358

                   
Query: 257    ccggt 261
              |||||
Sbjct: 124359 ccggt 124363
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>gb|AF514859.1| Oryza sativa (indica cultivar-group) ATP-dependent Clp protease
            (Pi-HIT-1) gene, complete cds
          Length = 2750

 Score =  262 bits (132), Expect = 1e-66
 Identities = 168/180 (93%)
 Strand = Plus / Plus

                                                                        
Query: 372  caggaatggggatttatgatgccatgaaattttgcaaggctgatatctcaaccgtttgct 431
            ||||||||||  |||||||||||||||||||||||||||||||||| ||||| || ||||
Sbjct: 1249 caggaatgggagtttatgatgccatgaaattttgcaaggctgatatatcaactgtctgct 1308

                                                                        
Query: 432  ttggattggcggcttccatgggtgcatttttgttagctgctgggacaaagggaaagagat 491
            ||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 1309 ttggactggcggcttccatgggtgcatttttgctagctgctgggacaaaggggaagagat 1368

                                                                        
Query: 492  tttgcatgccaaatgcgagaattatgatccatcagccatcagggggagctggtgggaagg 551
            |||||||||| ||||| ||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 1369 tttgcatgcctaatgcaagaattatgatccatcaaccatcagggggtgctggtgggaagg 1428



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 61/69 (88%)
 Strand = Plus / Plus

                                                                        
Query: 553  cacagagatgggattgcagataacagaaatgctctatgagaagataaagatcaacaagat 612
            ||||||||||||||| ||||||  ||| ||| | ||||||||||||||||||||||| ||
Sbjct: 1760 cacagagatgggattacagatacgagagatgatgtatgagaagataaagatcaacaaaat 1819

                     
Query: 613  aatgtcaag 621
            | |||||||
Sbjct: 1820 actgtcaag 1828
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>gb|AY109053.1| Zea mays PCO106983 mRNA sequence
          Length = 704

 Score =  224 bits (113), Expect = 3e-55
 Identities = 203/233 (87%)
 Strand = Plus / Minus

                                                                       
Query: 386 tatgatgccatgaaattttgcaaggctgatatctcaaccgtttgctttggattggcggct 445
           |||||||| |||||||||||||| |||||| | ||||| |||||||||||||||||||||
Sbjct: 702 tatgatgctatgaaattttgcaaagctgatgtgtcaactgtttgctttggattggcggct 643

                                                                       
Query: 446 tccatgggtgcatttttgttagctgctgggacaaagggaaagagattttgcatgccaaat 505
           || ||||||||||||||  | ||||||||||||||||| ||||| |  ||||||||||||
Sbjct: 642 tcaatgggtgcatttttacttgctgctgggacaaagggtaagaggtactgcatgccaaat 583

                                                                       
Query: 506 gcgagaattatgatccatcagccatcagggggagctggtgggaaggccacagagatggga 565
           ||||| ||||||||||||||||||||||| || ||||| ||||| | |||||||||||||
Sbjct: 582 gcgaggattatgatccatcagccatcaggtggcgctggcgggaaagtcacagagatggga 523

                                                                
Query: 566 ttgcagataacagaaatgctctatgagaagataaagatcaacaagataatgtc 618
            | ||||||| ||| ||| | || || ||||| |||||||| || ||||||||
Sbjct: 522 ctacagataagagagatgatgtacgaaaagattaagatcaataaaataatgtc 470
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>gb|AY107538.1| Zea mays PCO073954 mRNA sequence
          Length = 607

 Score =  105 bits (53), Expect = 2e-19
 Identities = 199/244 (81%), Gaps = 3/244 (1%)
 Strand = Plus / Plus

                                                                       
Query: 217 caacatgcttctccgccagcggatcatctttctcggctccccggtggatgatttgaatgc 276
           ||||||||| || |||||||| ||| |||| || || |||||||||||||||   | |||
Sbjct: 355 caacatgctccttcgccagcgcatcgtcttcctgggttccccggtggatgatacaagtgc 414

                                                                       
Query: 277 ggatcttatcaccagtcaactgttactattggatgcaaaggaccacacaaaggacatcaa 336
            ||||| || | ||| |||||  |||||||||||||| ||||||| || || || || ||
Sbjct: 415 tgatctcattatcagccaactcctactattggatgcagaggaccagactaaagatattaa 474

                                                                       
Query: 337 gttgtttattaattcacccggaggctccatcactgcaggaatggggatttatgatgccat 396
            |||||||| || ||||| |||||||| || || ||||| |||||  | |||||||| ||
Sbjct: 475 attgtttatcaactcacctggaggctctataacagcagggatgggagtatatgatgctat 534

                                                                       
Query: 397 gaaattttgcaaggctgatatctcaaccgtttgctttggattggcggcttccatgggtgc 456
           |||||||||||| |||||| | ||||  |||| |||| ||||||||||||  ||||||||
Sbjct: 535 gaaattttgcaaagctgatgtgtcaa-tgttt-cttt-gattggcggcttnaatgggtgc 591

               
Query: 457 attt 460
           ||||
Sbjct: 592 attt 595
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>gb|AF450251.1|AF450251 Oryza sativa blast-resistant mRNA, partial sequence
          Length = 613

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 74/83 (89%)
 Strand = Plus / Plus

                                                                       
Query: 539 gctggtgggaaggccacagagatgggattgcagataacagaaatgctctatgagaagata 598
           ||||||||||||| ||||||||||||||| ||||||  ||| ||| | ||||||||||||
Sbjct: 18  gctggtgggaaggtcacagagatgggattacagatacgagagatgatgtatgagaagata 77

                                  
Query: 599 aagatcaacaagataatgtcaag 621
           ||||||||||| ||| |||||||
Sbjct: 78  aagatcaacaaaatactgtcaag 100
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>gb|AY496111.1| Capsicum annuum ClpP putative protein mRNA, partial sequence
          Length = 624

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 75/91 (82%)
 Strand = Plus / Plus

                                                                       
Query: 325 aaaggacatcaagttgtttattaattcacccggaggctccatcactgcaggaatggggat 384
           |||||||||||  ||| | ||||||||||| || || ||  | ||||| || ||||| ||
Sbjct: 392 aaaggacatcacattgatcattaattcacctggtggttcagtaactgctgggatgggaat 451

                                          
Query: 385 ttatgatgccatgaaattttgcaaggctgat 415
            ||||||||||||||| | ||||||||||||
Sbjct: 452 ctatgatgccatgaaaatgtgcaaggctgat 482
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>gb|L41144.1|BNACLPPA Brassica oleracea ClpP (clpP) mRNA, partial cds
          Length = 971

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                       
Query: 339 tgtttattaattcacccggaggctccatcactgcaggaatggggatttatgatgccatga 398
           ||||||| ||||||||||| || || |||||||| || ||||| || |||||||| ||||
Sbjct: 295 tgtttatcaattcacccggtggttctatcactgctgggatgggaatatatgatgcaatga 354

             
Query: 399 aa 400
           ||
Sbjct: 355 aa 356
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>gb|DQ158856.1| Bigelowiella natans nucleomorph chromosome 1, partial sequence
          Length = 140590

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 443   gcttccatgggtgcatttttgttagct 469
             ||||| |||||||||||||||||||||
Sbjct: 83017 gcttcaatgggtgcatttttgttagct 82991
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>gb|CP000238.1| Baumannia cicadellinicola str. Hc (Homalodisca coagulata), complete
              genome
          Length = 686194

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                 
Query: 443    gcttccatgggtgcatttttgttagctgctgggac 477
              ||||||||||||||||| ||| | |||||||||||
Sbjct: 281007 gcttccatgggtgcattcttgcttgctgctgggac 280973
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>gb|AY267691.1| Bigelowiella natans ClpP protease mRNA, partial cds; nuclear gene
           for plastid product
          Length = 867

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 443 gcttccatgggtgcatttttgttagct 469
           ||||| |||||||||||||||||||||
Sbjct: 394 gcttcaatgggtgcatttttgttagct 420
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>gb|DQ071229.1| Bigelowiella natans clone 3 clpP2 mRNA, partial sequence;
           nucleomorph
          Length = 832

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 443 gcttccatgggtgcatttttgttagct 469
           ||||| |||||||||||||||||||||
Sbjct: 395 gcttcaatgggtgcatttttgttagct 421
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>gb|DQ071224.1| Bigelowiella natans clone 2 clpP2 mRNA, partial sequence;
           nucleomorph
          Length = 857

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 443 gcttccatgggtgcatttttgttagct 469
           ||||| |||||||||||||||||||||
Sbjct: 396 gcttcaatgggtgcatttttgttagct 422
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>gb|DQ071217.1| Bigelowiella natans clone 4 clpP2 mRNA, partial sequence;
           nucleomorph
          Length = 813

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 443 gcttccatgggtgcatttttgttagct 469
           ||||| |||||||||||||||||||||
Sbjct: 388 gcttcaatgggtgcatttttgttagct 414
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>gb|DP000002.1| Sminthopsis macroura target 1 genomic scaffold
          Length = 305394

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 469   tgctgggacaaagggaaagaga 490
             ||||||||||||||||||||||
Sbjct: 53011 tgctgggacaaagggaaagaga 53032
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>gb|AC123967.3| Sminthopsis macroura clone 102C13, complete sequence
          Length = 59818

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 469   tgctgggacaaagggaaagaga 490
             ||||||||||||||||||||||
Sbjct: 53011 tgctgggacaaagggaaagaga 53032
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>gb|AE009001.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 27
           of 256 of the complete sequence
          Length = 11563

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 8   atggcgaccatcacggcgcct 28
           |||||||||||||||||||||
Sbjct: 794 atggcgaccatcacggcgcct 774
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>ref|XM_969571.1| PREDICTED: Tribolium castaneum similar to Putative ATP-dependent
           Clp protease proteolytic subunit, mitochondrial
           precursor (Endopeptidase Clp) (LOC663531), mRNA
          Length = 777

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 510 gaattatgatccatcagccatcagg 534
           ||||||||||||||||||| |||||
Sbjct: 461 gaattatgatccatcagccttcagg 485
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>gb|DQ071215.1| Bigelowiella natans clpP2 mRNA, partial sequence
          Length = 874

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 443 gcttccatgggtgcatttttgttagct 469
           ||||| ||||| |||||||||||||||
Sbjct: 393 gcttcnatgggngcatttttgttagct 419
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>gb|AC093283.3| Homo sapiens chromosome 5 clone RP11-428C6, complete sequence
          Length = 206254

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 445   ttccatgggtgcatttttgtt 465
             |||||||||||||||||||||
Sbjct: 78699 ttccatgggtgcatttttgtt 78719
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>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome
          Length = 2841581

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 8      atggcgaccatcacggcgcct 28
              |||||||||||||||||||||
Sbjct: 286130 atggcgaccatcacggcgcct 286110
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>gb|AC160835.2| Sequence of Xenopus tropicalis BAC clone ISB1-8A8 containing the
           3'end of FRZ3, complete sequence
          Length = 42373

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 569 cagataacagaaatgctctat 589
           |||||||||||||||||||||
Sbjct: 391 cagataacagaaatgctctat 371
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>gb|AC149149.3| Xenopus tropicalis clone ISB-175F5, complete sequence
          Length = 116498

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 450   tgggtgcatttttgttagctg 470
             |||||||||||||||||||||
Sbjct: 85910 tgggtgcatttttgttagctg 85930
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>ref|XM_392540.2| PREDICTED: Apis mellifera similar to novel protein similar to human
           and mouse ClpP caseinolytic protease, ATP-dependent,
           proteolytic subunit homolog (E. coli) (CLPP)
           (LOC409011), mRNA
          Length = 1081

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 498 tgccaaatgcgagaattatgatccatcagccatcagg 534
           |||| ||||| ||||||||||  ||||||||||||||
Sbjct: 777 tgcctaatgcaagaattatgacacatcagccatcagg 813
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>ref|NM_123547.1| Arabidopsis thaliana protein prenyltransferase AT5G41820 mRNA,
           complete cds
          Length = 2064

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 291 gtcaactgttactattggat 310
           ||||||||||||||||||||
Sbjct: 921 gtcaactgttactattggat 940
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>ref|NM_105338.2| Arabidopsis thaliana CLPP3; endopeptidase Clp AT1G66670 (CLPP3)
           mRNA, complete cds
          Length = 1194

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                       
Query: 341 tttattaattcacccggaggctccatcactgcaggaatggggatttatgatgccatgaaa 400
           ||||| ||||||||||| || || || ||||| || ||||| || |||||||| ||||||
Sbjct: 439 tttatcaattcacccggtggatctattactgctgggatgggaatatatgatgcaatgaaa 498
to top
>ref|XM_638955.1| Dictyostelium discoideum TFIID subunit (DDB0231001), partial mRNA
          Length = 2046

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 591  agaagataaagatcaacaagataa 614
            |||| |||||||||||||||||||
Sbjct: 1335 agaaaataaagatcaacaagataa 1358
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>gb|AC160016.2| Mus musculus BAC clone RP24-421D3 from chromosome 9, complete
            sequence
          Length = 186944

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 528  catcagggggagctggtggg 547
            ||||||||||||||||||||
Sbjct: 7567 catcagggggagctggtggg 7548
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>ref|XM_480351.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1248

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 165 cgggagcgcgaccggcagct 184
           ||||||||||||||||||||
Sbjct: 124 cgggagcgcgaccggcagct 143
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>emb|CT009708.6| Mouse DNA sequence from clone RP23-82F10 on chromosome 9, complete
             sequence
          Length = 247670

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 528   catcagggggagctggtggg 547
             ||||||||||||||||||||
Sbjct: 50785 catcagggggagctggtggg 50804
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>gb|AC004912.2| Homo sapiens PAC clone RP5-871B15 from 7, complete sequence
          Length = 157321

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 545    gggaaggccacagagatggg 564
              ||||||||||||||||||||
Sbjct: 139414 gggaaggccacagagatggg 139395
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>emb|CR694080.2|CNS0FYI4 Tetraodon nigroviridis full-length cDNA
          Length = 764

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 452 ggtgcatttttgttagctgc 471
           ||||||||||||||||||||
Sbjct: 587 ggtgcatttttgttagctgc 606
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>emb|CR678681.2|CNS0FMMD Tetraodon nigroviridis full-length cDNA
          Length = 679

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 452 ggtgcatttttgttagctgc 471
           ||||||||||||||||||||
Sbjct: 534 ggtgcatttttgttagctgc 553
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>emb|CR678052.2|CNS0FM57 Tetraodon nigroviridis full-length cDNA
          Length = 745

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 452 ggtgcatttttgttagctgc 471
           ||||||||||||||||||||
Sbjct: 567 ggtgcatttttgttagctgc 586
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>emb|CR674696.2|CNS0FJKE Tetraodon nigroviridis full-length cDNA
          Length = 769

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 452 ggtgcatttttgttagctgc 471
           ||||||||||||||||||||
Sbjct: 591 ggtgcatttttgttagctgc 610
to top
>emb|CR671456.2|CNS0FH2E Tetraodon nigroviridis full-length cDNA
          Length = 757

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 452 ggtgcatttttgttagctgc 471
           ||||||||||||||||||||
Sbjct: 586 ggtgcatttttgttagctgc 605
to top
>emb|CR670920.2|CNS0FGNI Tetraodon nigroviridis full-length cDNA
          Length = 716

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 452 ggtgcatttttgttagctgc 471
           ||||||||||||||||||||
Sbjct: 538 ggtgcatttttgttagctgc 557
to top
>emb|CR669971.2|CNS0FFX5 Tetraodon nigroviridis full-length cDNA
          Length = 757

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 452 ggtgcatttttgttagctgc 471
           ||||||||||||||||||||
Sbjct: 586 ggtgcatttttgttagctgc 605
to top
>emb|CR668522.2|CNS0FESW Tetraodon nigroviridis full-length cDNA
          Length = 753

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 452 ggtgcatttttgttagctgc 471
           ||||||||||||||||||||
Sbjct: 579 ggtgcatttttgttagctgc 598
to top
>emb|CR665602.2|CNS0FCJS Tetraodon nigroviridis full-length cDNA
          Length = 765

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 452 ggtgcatttttgttagctgc 471
           ||||||||||||||||||||
Sbjct: 596 ggtgcatttttgttagctgc 615
to top
>emb|CR663706.2|CNS0FB34 Tetraodon nigroviridis full-length cDNA
          Length = 766

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 452 ggtgcatttttgttagctgc 471
           ||||||||||||||||||||
Sbjct: 586 ggtgcatttttgttagctgc 605
to top
>emb|CR662211.2|CNS0F9XL Tetraodon nigroviridis full-length cDNA
          Length = 769

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 452 ggtgcatttttgttagctgc 471
           ||||||||||||||||||||
Sbjct: 591 ggtgcatttttgttagctgc 610
to top
>emb|CR661865.2|CNS0F9NZ Tetraodon nigroviridis full-length cDNA
          Length = 526

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 452 ggtgcatttttgttagctgc 471
           ||||||||||||||||||||
Sbjct: 346 ggtgcatttttgttagctgc 365
to top
>gb|AC142209.3| Homo sapiens chromosome 5 clone XXyac-ICRF4X137E6, complete sequence
          Length = 38959

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 398   aaattttgcaaggctgatat 417
             ||||||||||||||||||||
Sbjct: 29077 aaattttgcaaggctgatat 29058
to top
>dbj|AB190353.1| Brassica rapa BrSLGf2b, BrSLGf2a genes, complete cds
          Length = 39220

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 341  tttattaattcacccggaggctccatcactgc 372
            ||||| ||||||||||| || |||||||||||
Sbjct: 7477 tttatcaattcacccggtggttccatcactgc 7446
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>gb|AC108120.3| Homo sapiens chromosome 5 clone RP11-524L6, complete sequence
          Length = 212755

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 403    ttgcaaggctgatatctcaa 422
              ||||||||||||||||||||
Sbjct: 119802 ttgcaaggctgatatctcaa 119783
to top
>gb|AC117385.3| Homo sapiens 3 BAC RP11-13I22 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 168186

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 562   gggattgcagataacagaaatgct 585
             |||||||||||||||| |||||||
Sbjct: 19762 gggattgcagataacataaatgct 19785
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>gb|AC092946.7| Homo sapiens 3 BAC RP11-785G3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 115500

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 590   gagaagataaagatcaacaagataatgt 617
             ||||||| |||||||||||||| |||||
Sbjct: 10438 gagaagaaaaagatcaacaagagaatgt 10411
to top
>gb|AC010240.7| Homo sapiens chromosome 5 clone CTC-350I8, complete sequence
          Length = 112646

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 198   tcgaggagttggacaccagc 217
             ||||||||||||||||||||
Sbjct: 92860 tcgaggagttggacaccagc 92841
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>gb|AY072526.1| Arabidopsis thaliana ATP-dependent Clp protease (nClpP3)
           (At1g66670; T12I7.12) mRNA, complete cds
          Length = 986

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                       
Query: 341 tttattaattcacccggaggctccatcactgcaggaatggggatttatgatgccatgaaa 400
           ||||| ||||||||||| || || || ||||| || ||||| || |||||||| ||||||
Sbjct: 385 tttatcaattcacccggtggatctattactgctgggatgggaatatatgatgcaatgaaa 444
to top
>gb|AC159023.4| Pan troglodytes BAC clone CH251-506L16 from chromosome unknown, complete
              sequence
          Length = 180977

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 198    tcgaggagttggacaccagc 217
              ||||||||||||||||||||
Sbjct: 107093 tcgaggagttggacaccagc 107112
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>gb|AC160131.2| Mus musculus BAC clone RP23-226D9 from chromosome 12, complete sequence
          Length = 202807

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 473    gggacaaagggaaagagatt 492
              ||||||||||||||||||||
Sbjct: 147511 gggacaaagggaaagagatt 147492
to top
>gb|AF370528.1|AF370528 Arabidopsis thaliana ATP-dependent Clp protease; nClpP3 (T12I7.12)
           mRNA, complete cds
          Length = 1108

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                       
Query: 341 tttattaattcacccggaggctccatcactgcaggaatggggatttatgatgccatgaaa 400
           ||||| ||||||||||| || || || ||||| || ||||| || |||||||| ||||||
Sbjct: 422 tttatcaattcacccggtggatctattactgctgggatgggaatatatgatgcaatgaaa 481
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 165     cgggagcgcgaccggcagct 184
               ||||||||||||||||||||
Sbjct: 4540750 cgggagcgcgaccggcagct 4540769
to top
>emb|BX817427.1|CNS0ACFS Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL21ZH02 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1046

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                       
Query: 341 tttattaattcacccggaggctccatcactgcaggaatggggatttatgatgccatgaaa 400
           ||||| ||||||||||| || || || ||||| || ||||| || |||||||| ||||||
Sbjct: 381 tttatcaattcacccggtggatctattactgctgggatgggaatatatgatgcaatgaaa 440
to top
>gb|AC117070.2| Dictyostelium discoideum chromosome 2 map 2097701-2233941 strain AX4,
             complete sequence
          Length = 136240

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 591   agaagataaagatcaacaagataa 614
             |||| |||||||||||||||||||
Sbjct: 37412 agaaaataaagatcaacaagataa 37389
to top
>gb|AY087349.1| Arabidopsis thaliana clone 34480 mRNA, complete sequence
          Length = 1190

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                       
Query: 341 tttattaattcacccggaggctccatcactgcaggaatggggatttatgatgccatgaaa 400
           ||||| ||||||||||| || || || ||||| || ||||| || |||||||| ||||||
Sbjct: 439 tttatcaattcacccggtggatctattactgctgggatgggaatatatgatgcaatgaaa 498
to top
>gb|AE013218.1| Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome
          Length = 641454

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                          
Query: 471    ctgggacaaagggaaagagattttgcatgccaaatgcgagaattatgatccatcagccat 530
              |||| |||||||| || |||| |||  | |||||||| ||||||||||| ||||| ||||
Sbjct: 521481 ctggtacaaagggtaaaagatcttgtttaccaaatgcaagaattatgattcatcaaccat 521540
to top
>gb|AC097004.3| Papio anubis clone RP41-290N16, complete sequence
          Length = 166987

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 545    gggaaggccacagagatggg 564
              ||||||||||||||||||||
Sbjct: 102171 gggaaggccacagagatggg 102152
to top
>gb|AC159743.4| Pan troglodytes BAC clone CH251-267D14 from chromosome unknown, complete
              sequence
          Length = 178837

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 198    tcgaggagttggacaccagc 217
              ||||||||||||||||||||
Sbjct: 166487 tcgaggagttggacaccagc 166468
to top
>dbj|AP003878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1120_C08
          Length = 150300

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 165   cgggagcgcgaccggcagct 184
             ||||||||||||||||||||
Sbjct: 64598 cgggagcgcgaccggcagct 64617
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>dbj|AB016871.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K16L22
          Length = 79109

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 291   gtcaactgttactattggat 310
             ||||||||||||||||||||
Sbjct: 43371 gtcaactgttactattggat 43390
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>dbj|AB022328.1| Arabidopsis thaliana mRNA for nClpP3 (nuclear encoded ClpP3),
           complete cds
          Length = 1124

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                       
Query: 341 tttattaattcacccggaggctccatcactgcaggaatggggatttatgatgccatgaaa 400
           ||||| ||||||||||| || || || ||||| || ||||| || |||||||| ||||||
Sbjct: 386 tttatcaattcacccggtggatctattactgctgggatgggaatatatgatgcaatgaaa 445
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>dbj|AP004619.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0583B06
          Length = 134442

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 165    cgggagcgcgaccggcagct 184
              ||||||||||||||||||||
Sbjct: 106640 cgggagcgcgaccggcagct 106659
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>ref|XM_308493.2| Anopheles gambiae str. PEST ENSANGP00000022800
           (ENSANGG00000007128), partial mRNA
          Length = 2943

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 96  cggccatccgctcatcggcggcggcagc 123
           |||| ||||||||| |||||||||||||
Sbjct: 798 cggcgatccgctcagcggcggcggcagc 825
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>gb|AF032123.1|AF032123 Arabidopsis thaliana clp protease (CLP) mRNA, partial cds
          Length = 1147

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                       
Query: 341 tttattaattcacccggaggctccatcactgcaggaatggggatttatgatgccatgaaa 400
           ||||| ||||||||||| || || || ||||| || ||||| || |||||||| ||||||
Sbjct: 388 tttatcaattcacccggtggatctattactgctgggatgggaatatatgatgcaatgaaa 447
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>emb|AL023580.1|HS372K1 Human DNA sequence from clone RP3-372K1 on chromosome 6q24 Contains a
              basic transcription factor (BTF3) pseudogene, the gene for
              a possible ortholog of murine oligodendrocyte transcription
              factor 3 (Olig3) and four CpG islands, complete sequence
          Length = 147055

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 361    ctccatcactgcaggaatgg 380
              ||||||||||||||||||||
Sbjct: 116019 ctccatcactgcaggaatgg 116038
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>emb|AL928539.4| Mouse DNA sequence from clone RP23-152D24 on chromosome X, complete
            sequence
          Length = 165789

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 578  gaaatgctctatgagaagat 597
            ||||||||||||||||||||
Sbjct: 5530 gaaatgctctatgagaagat 5511


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,761,311
Number of Sequences: 3902068
Number of extensions: 5761311
Number of successful extensions: 110192
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 109947
Number of HSP's gapped (non-prelim): 242
length of query: 637
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 614
effective length of database: 17,143,297,704
effective search space: 10525984790256
effective search space used: 10525984790256
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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