>gb|AY033628.1| Hordeum vulgare subsp. vulgare horcolin mRNA, complete cds
          Length = 665

 Score = 1005 bits (507), Expect = 0.0
 Identities = 507/507 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atacataggttgctgccttgggtggatttggtaaagcaggagccaaaatgagcaagcctg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29  atacataggttgctgccttgggtggatttggtaaagcaggagccaaaatgagcaagcctg 88

                                                                       
Query: 61  tgaagattgggccatggggtgggaatggtggcagcgagcgtgatgtccagccaaagccca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89  tgaagattgggccatggggtgggaatggtggcagcgagcgtgatgtccagccaaagccca 148

                                                                       
Query: 121 tccgtatggttagtatgaccgtcagtagcggagctatcgttgacgctattgcattcacct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 tccgtatggttagtatgaccgtcagtagcggagctatcgttgacgctattgcattcacct 208

                                                                       
Query: 181 atgtgggcaccgataacgttcaacactcttccggcatcaagtggggtggcactggcggca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 atgtgggcaccgataacgttcaacactcttccggcatcaagtggggtggcactggcggca 268

                                                                       
Query: 241 cagaagatacgattaatctagacgctacgaactacgtgaccgaaatctccgggacagtgg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 cagaagatacgattaatctagacgctacgaactacgtgaccgaaatctccgggacagtgg 328

                                                                       
Query: 301 gtaaatttgggaccgacgacatcgtcacgtctcttaaaattatcacctccaagggggtta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 gtaaatttgggaccgacgacatcgtcacgtctcttaaaattatcacctccaagggggtta 388

                                                                       
Query: 361 ccaggacatacggctcaggtaccggaattccattccgcgtcccggtgcttgacgggggta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 ccaggacatacggctcaggtaccggaattccattccgcgtcccggtgcttgacgggggta 448

                                                                       
Query: 421 agatcgccggcttctttggacgggctggtgctttcctggacgcgattgggttctacatta 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 agatcgccggcttctttggacgggctggtgctttcctggacgcgattgggttctacatta 508

                                      
Query: 481 ctccatgaatggttggttgatatcggc 507
           |||||||||||||||||||||||||||
Sbjct: 509 ctccatgaatggttggttgatatcggc 535

>gb|AY770690.1| Hordeum vulgare horcolin gene, complete cds
          Length = 1338

 Score =  509 bits (257), Expect = e-141
 Identities = 257/257 (100%)
 Strand = Plus / Plus

                                                                        
Query: 251  gattaatctagacgctacgaactacgtgaccgaaatctccgggacagtgggtaaatttgg 310
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 952  gattaatctagacgctacgaactacgtgaccgaaatctccgggacagtgggtaaatttgg 1011

                                                                        
Query: 311  gaccgacgacatcgtcacgtctcttaaaattatcacctccaagggggttaccaggacata 370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 gaccgacgacatcgtcacgtctcttaaaattatcacctccaagggggttaccaggacata 1071

                                                                        
Query: 371  cggctcaggtaccggaattccattccgcgtcccggtgcttgacgggggtaagatcgccgg 430
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1072 cggctcaggtaccggaattccattccgcgtcccggtgcttgacgggggtaagatcgccgg 1131

                                                                        
Query: 431  cttctttggacgggctggtgctttcctggacgcgattgggttctacattactccatgaat 490
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 cttctttggacgggctggtgctttcctggacgcgattgggttctacattactccatgaat 1191

                             
Query: 491  ggttggttgatatcggc 507
            |||||||||||||||||
Sbjct: 1192 ggttggttgatatcggc 1208



 Score =  400 bits (202), Expect = e-108
 Identities = 202/202 (100%)
 Strand = Plus / Plus

                                                                       
Query: 50  gagcaagcctgtgaagattgggccatggggtgggaatggtggcagcgagcgtgatgtcca 109
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 gagcaagcctgtgaagattgggccatggggtgggaatggtggcagcgagcgtgatgtcca 642

                                                                       
Query: 110 gccaaagcccatccgtatggttagtatgaccgtcagtagcggagctatcgttgacgctat 169
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 gccaaagcccatccgtatggttagtatgaccgtcagtagcggagctatcgttgacgctat 702

                                                                       
Query: 170 tgcattcacctatgtgggcaccgataacgttcaacactcttccggcatcaagtggggtgg 229
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 tgcattcacctatgtgggcaccgataacgttcaacactcttccggcatcaagtggggtgg 762

                                 
Query: 230 cactggcggcacagaagatacg 251
           ||||||||||||||||||||||
Sbjct: 763 cactggcggcacagaagatacg 784



 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 50/50 (100%)
 Strand = Plus / Plus

                                                             
Query: 1   atacataggttgctgccttgggtggatttggtaaagcaggagccaaaatg 50
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 atacataggttgctgccttgggtggatttggtaaagcaggagccaaaatg 429

>gb|DQ016627.1| Agrostis stolonifera Crs-1 mRNA, complete cds
          Length = 1283

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 67  ttgggccatggggtgggaatgg 88
           ||||||||||||||||||||||
Sbjct: 578 ttgggccatggggtgggaatgg 599

>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome
          Length = 3730232

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 437     tggacgggctggtgctttcc 456
               ||||||||||||||||||||
Sbjct: 2644122 tggacgggctggtgctttcc 2644141

>ref|XM_472139.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1434

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 62  gaagattgggccatggggtgggaa 85
           ||||||||||||||||||| ||||
Sbjct: 501 gaagattgggccatggggttggaa 524

>gb|AC117994.12| Mus musculus chromosome 6, clone RP23-25K2, complete sequence
          Length = 237945

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 80     tgggaatggtggcagcgagc 99
              ||||||||||||||||||||
Sbjct: 235116 tgggaatggtggcagcgagc 235135

>gb|AF241728.2| Homo sapiens chromosome X clone RP4-646N3 map p11.4, complete sequence
          Length = 133506

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 38    aggagccaaaatgagcaagc 57
             ||||||||||||||||||||
Sbjct: 98724 aggagccaaaatgagcaagc 98743

>gb|AC120984.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBb0026G02, complete sequence
          Length = 123472

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 53    caagcctgtgaagattgggccatggggtgggaatgg 88
             ||||| ||| ||||||||||| |||||||| |||||
Sbjct: 16430 caagcttgtcaagattgggccctggggtggaaatgg 16395

>gb|AC153865.3| Mus musculus  BAC RP23-373P9 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 180703

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 26    atttggtaaagcaggagcca 45
             ||||||||||||||||||||
Sbjct: 22117 atttggtaaagcaggagcca 22136

>gb|AC120884.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0017D19, complete sequence
          Length = 142015

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 53    caagcctgtgaagattgggccatggggtgggaatgg 88
             ||||| ||| ||||||||||| |||||||| |||||
Sbjct: 86416 caagcttgtcaagattgggccctggggtggaaatgg 86381

>emb|AL731632.2|OSJN00275 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0042I07,
             complete sequence
          Length = 129198

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 62    gaagattgggccatggggtgggaa 85
             ||||||||||||||||||| ||||
Sbjct: 37771 gaagattgggccatggggttggaa 37794

>dbj|AK145336.1| Mus musculus 1 cell embryo 1 cell cDNA, RIKEN full-length enriched
            library, clone:I0C0011J12 product:unclassifiable, full
            insert sequence
          Length = 3247

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 33   aaagcaggagccaaaatgag 52
            ||||||||||||||||||||
Sbjct: 1873 aaagcaggagccaaaatgag 1854

>gb|AC181984.1| Pan troglodytes chromosome X clone CH251-244H4 map human ortholog p11.4,
              complete sequence
          Length = 184116

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 38     aggagccaaaatgagcaagc 57
              ||||||||||||||||||||
Sbjct: 146698 aggagccaaaatgagcaagc 146717

>gb|AC153880.6| Mus musculus 6 BAC RP23-384J7 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 189970

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 26     atttggtaaagcaggagcca 45
              ||||||||||||||||||||
Sbjct: 170972 atttggtaaagcaggagcca 170991

>gb|AC022212.4|AC022212 Homo sapiens BAC clone RP11-708E9 from Xq23, complete sequence
          Length = 187313

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 38    aggagccaaaatgagcaagc 57
             ||||||||||||||||||||
Sbjct: 64712 aggagccaaaatgagcaagc 64731

>emb|BX547992.4| Zebrafish DNA sequence from clone DKEY-225I9 in linkage group 3, complete
              sequence
          Length = 181320

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 293    gacagtgggtaaatttggga 312
              ||||||||||||||||||||
Sbjct: 143579 gacagtgggtaaatttggga 143598

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 62       gaagattgggccatggggtgggaa 85
                ||||||||||||||||||| ||||
Sbjct: 17947492 gaagattgggccatggggttggaa 17947515

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                    
Query: 53       caagcctgtgaagattgggccatggggtgggaatgg 88
                ||||| ||| ||||||||||| |||||||| |||||
Sbjct: 22655630 caagcttgtcaagattgggccctggggtggaaatgg 22655595

>gb|AC156397.5| Mus musculus 6 BAC RP24-279P24 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 166910

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 80    tgggaatggtggcagcgagc 99
             ||||||||||||||||||||
Sbjct: 51513 tgggaatggtggcagcgagc 51532

>emb|CR936503.1| Lactobacillus sakei strain 23K complete genome
          Length = 1884661

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 174    ttcacctatgtgggcaccgataac 197
              |||||||| |||||||||||||||
Sbjct: 951414 ttcacctaagtgggcaccgataac 951391

>emb|AL845274.17| Mouse DNA sequence from clone RP23-146F24 on chromosome 2, complete
              sequence
          Length = 230151

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 33     aaagcaggagccaaaatgag 52
              ||||||||||||||||||||
Sbjct: 122743 aaagcaggagccaaaatgag 122724

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                    
Query: 53       caagcctgtgaagattgggccatggggtgggaatgg 88
                ||||| ||| ||||||||||| |||||||| |||||
Sbjct: 22965541 caagcttgtcaagattgggccctggggtggaaatgg 22965506

>emb|AL731587.2|OSJN00230 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0016N04,
              complete sequence
          Length = 164645

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 62     gaagattgggccatggggtgggaa 85
              ||||||||||||||||||| ||||
Sbjct: 144247 gaagattgggccatggggttggaa 144270

>gb|AE017262.2| Listeria monocytogenes str. 4b F2365, complete genome
          Length = 2905187

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 109    agccaaagcccatccgtatggtta 132
              |||||||||| |||||||||||||
Sbjct: 473494 agccaaagccaatccgtatggtta 473517


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,881,391
Number of Sequences: 3902068
Number of extensions: 2881391
Number of successful extensions: 55738
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 55607
Number of HSP's gapped (non-prelim): 131
length of query: 507
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 485
effective length of database: 17,147,199,772
effective search space: 8316391889420
effective search space used: 8316391889420
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)