ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd19f24 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_193124.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1221 Score = 563 bits (284), Expect = e-157 Identities = 460/519 (88%), Gaps = 6/519 (1%) Strand = Plus / Plus Query: 143 ggctccgagccgtgggcgaatgacacgcgggtctactccaccaatgccaactccggcagc 202 ||||| ||||||||| |||| | |||| |||||||||||||||||||||||| || ||| Sbjct: 61 ggctctgagccgtggctgaatcagacgcaggtctactccaccaatgccaactctggtagc 120 Query: 203 ggcagcaacggcgccttcgtcgccctcaccctcatccagtccgccgccgccaagggagcc 262 || |||| |||||||| | || ||||||||||| || ||||||||||||||| Sbjct: 121 ------aatggcgtcttcgtcgggattacgctcatccagtcggcggccgccaagggagcc 174 Query: 263 gtatgcttggatggaagcttaccaggttaccacctacaccgaggatctggatcagggtca 322 |||||||||||||| ||||||||||| || |||||||||||||| | |||||||||| || Sbjct: 175 gtatgcttggatgggagcttaccagggtatcacctacaccgagggtttggatcaggggca 234 Query: 323 aacaattggcttgtcaatctggagggtggaggctggtgcaatgatgttaaaagctgtgtg 382 |||| ||||||||||||| |||||||||||||||||||||| |||||||||||||| ||| Sbjct: 235 aacagttggcttgtcaatttggagggtggaggctggtgcaacgatgttaaaagctgcgtg 294 Query: 383 ttccgcaagggcagtcggcgtggttcatcaaaccacatggagaggcagctccagtttaca 442 || |||||| |||||||||||||||||||||| ||||||||||| || ||||||||||| Sbjct: 295 tttcgcaagagcagtcggcgtggttcatcaaatcacatggagagccaactccagtttact 354 Query: 443 ggcataatgagtaacagacctgaagaaaacccagatttctacaactggaacagagtgaag 502 || |||||||||||||| ||||||||||| || ||||||||||||||||||||||||||| Sbjct: 355 gggataatgagtaacaggcctgaagaaaatcctgatttctacaactggaacagagtgaag 414 Query: 503 gttcggtattgtgatggtggatccttcaccggtgatggggctgacgcggcttcaggcctt 562 ||||| ||||||||||| ||||||||||| |||||||||||||| ||| || |||||||| Sbjct: 415 gttcgatattgtgatggcggatccttcactggtgatggggctgatgcgtctgcaggcctt 474 Query: 563 tatttccgaggtcagcgtatttggcaggctgccatggatgacttgatggcccagggaatg 622 |||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||| Sbjct: 475 tatttccgaggtcagcgtatttggcaggctgctatggatgatctgatggcccaaggaatg 534 Query: 623 cgttctgctagtcaggcccttctttctggatgctctgct 661 | | ||||| ||||| ||||||||||||||||||||| Sbjct: 535 agatatgctaaccaggcacttctttctggatgctctgct 573
>ref|XM_506495.1| PREDICTED Oryza sativa (japonica cultivar-group), P0455H11.118-1 mRNA Length = 1744 Score = 563 bits (284), Expect = e-157 Identities = 460/519 (88%), Gaps = 6/519 (1%) Strand = Plus / Plus Query: 143 ggctccgagccgtgggcgaatgacacgcgggtctactccaccaatgccaactccggcagc 202 ||||| ||||||||| |||| | |||| |||||||||||||||||||||||| || ||| Sbjct: 184 ggctctgagccgtggctgaatcagacgcaggtctactccaccaatgccaactctggtagc 243 Query: 203 ggcagcaacggcgccttcgtcgccctcaccctcatccagtccgccgccgccaagggagcc 262 || |||| |||||||| | || ||||||||||| || ||||||||||||||| Sbjct: 244 ------aatggcgtcttcgtcgggattacgctcatccagtcggcggccgccaagggagcc 297 Query: 263 gtatgcttggatggaagcttaccaggttaccacctacaccgaggatctggatcagggtca 322 |||||||||||||| ||||||||||| || |||||||||||||| | |||||||||| || Sbjct: 298 gtatgcttggatgggagcttaccagggtatcacctacaccgagggtttggatcaggggca 357 Query: 323 aacaattggcttgtcaatctggagggtggaggctggtgcaatgatgttaaaagctgtgtg 382 |||| ||||||||||||| |||||||||||||||||||||| |||||||||||||| ||| Sbjct: 358 aacagttggcttgtcaatttggagggtggaggctggtgcaacgatgttaaaagctgcgtg 417 Query: 383 ttccgcaagggcagtcggcgtggttcatcaaaccacatggagaggcagctccagtttaca 442 || |||||| |||||||||||||||||||||| ||||||||||| || ||||||||||| Sbjct: 418 tttcgcaagagcagtcggcgtggttcatcaaatcacatggagagccaactccagtttact 477 Query: 443 ggcataatgagtaacagacctgaagaaaacccagatttctacaactggaacagagtgaag 502 || |||||||||||||| ||||||||||| || ||||||||||||||||||||||||||| Sbjct: 478 gggataatgagtaacaggcctgaagaaaatcctgatttctacaactggaacagagtgaag 537 Query: 503 gttcggtattgtgatggtggatccttcaccggtgatggggctgacgcggcttcaggcctt 562 ||||| ||||||||||| ||||||||||| |||||||||||||| ||| || |||||||| Sbjct: 538 gttcgatattgtgatggcggatccttcactggtgatggggctgatgcgtctgcaggcctt 597 Query: 563 tatttccgaggtcagcgtatttggcaggctgccatggatgacttgatggcccagggaatg 622 |||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||| Sbjct: 598 tatttccgaggtcagcgtatttggcaggctgctatggatgatctgatggcccaaggaatg 657 Query: 623 cgttctgctagtcaggcccttctttctggatgctctgct 661 | | ||||| ||||| ||||||||||||||||||||| Sbjct: 658 agatatgctaaccaggcacttctttctggatgctctgct 696
>dbj|AK065122.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001O22, full insert sequence Length = 1744 Score = 563 bits (284), Expect = e-157 Identities = 460/519 (88%), Gaps = 6/519 (1%) Strand = Plus / Plus Query: 143 ggctccgagccgtgggcgaatgacacgcgggtctactccaccaatgccaactccggcagc 202 ||||| ||||||||| |||| | |||| |||||||||||||||||||||||| || ||| Sbjct: 184 ggctctgagccgtggctgaatcagacgcaggtctactccaccaatgccaactctggtagc 243 Query: 203 ggcagcaacggcgccttcgtcgccctcaccctcatccagtccgccgccgccaagggagcc 262 || |||| |||||||| | || ||||||||||| || ||||||||||||||| Sbjct: 244 ------aatggcgtcttcgtcgggattacgctcatccagtcggcggccgccaagggagcc 297 Query: 263 gtatgcttggatggaagcttaccaggttaccacctacaccgaggatctggatcagggtca 322 |||||||||||||| ||||||||||| || |||||||||||||| | |||||||||| || Sbjct: 298 gtatgcttggatgggagcttaccagggtatcacctacaccgagggtttggatcaggggca 357 Query: 323 aacaattggcttgtcaatctggagggtggaggctggtgcaatgatgttaaaagctgtgtg 382 |||| ||||||||||||| |||||||||||||||||||||| |||||||||||||| ||| Sbjct: 358 aacagttggcttgtcaatttggagggtggaggctggtgcaacgatgttaaaagctgcgtg 417 Query: 383 ttccgcaagggcagtcggcgtggttcatcaaaccacatggagaggcagctccagtttaca 442 || |||||| |||||||||||||||||||||| ||||||||||| || ||||||||||| Sbjct: 418 tttcgcaagagcagtcggcgtggttcatcaaatcacatggagagccaactccagtttact 477 Query: 443 ggcataatgagtaacagacctgaagaaaacccagatttctacaactggaacagagtgaag 502 || |||||||||||||| ||||||||||| || ||||||||||||||||||||||||||| Sbjct: 478 gggataatgagtaacaggcctgaagaaaatcctgatttctacaactggaacagagtgaag 537 Query: 503 gttcggtattgtgatggtggatccttcaccggtgatggggctgacgcggcttcaggcctt 562 ||||| ||||||||||| ||||||||||| |||||||||||||| ||| || |||||||| Sbjct: 538 gttcgatattgtgatggcggatccttcactggtgatggggctgatgcgtctgcaggcctt 597 Query: 563 tatttccgaggtcagcgtatttggcaggctgccatggatgacttgatggcccagggaatg 622 |||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||| Sbjct: 598 tatttccgaggtcagcgtatttggcaggctgctatggatgatctgatggcccaaggaatg 657 Query: 623 cgttctgctagtcaggcccttctttctggatgctctgct 661 | | ||||| ||||| ||||||||||||||||||||| Sbjct: 658 agatatgctaaccaggcacttctttctggatgctctgct 696
>gb|BT016667.1| Zea mays clone Contig500 mRNA sequence Length = 1741 Score = 521 bits (263), Expect = e-145 Identities = 460/525 (87%), Gaps = 3/525 (0%) Strand = Plus / Plus Query: 136 ggcgcgcggctccgagccgtgggcgaatgacacgcgggtctactccaccaatgccaactc 195 |||||| ||||||||||||||| ||| || |||| ||| ||| |||||| |||||||| Sbjct: 171 ggcgcggggctccgagccgtggtggaacgagacgcaggtgtacgccaccaccgccaactc 230 Query: 196 cggcagcggcagcaacggcgccttcgtcgccctcaccctcatccagtccgccgccgccaa 255 ||| |||||| |||||| |||||||| |||||| ||||||||||| || || ||||| Sbjct: 231 cggtggcggca---acggcgtcttcgtcggcctcacgctcatccagtcggcggcggccaa 287 Query: 256 gggagccgtatgcttggatggaagcttaccaggttaccacctacaccgaggatctggatc 315 |||||| || |||||||||||||||||||||||||||||||| ||| |||| | |||||| Sbjct: 288 gggagcggtgtgcttggatggaagcttaccaggttaccacctccacagagggtttggatc 347 Query: 316 agggtcaaacaattggcttgtcaatctggagggtggaggctggtgcaatgatgttaaaag 375 ||| |||||| |||||| |||||||| ||||| |||||||||||||||||| | || Sbjct: 348 aggagcaaacagttggctcgtcaatctcgagggcggaggctggtgcaatgatcgcagcag 407 Query: 376 ctgtgtgttccgcaagggcagtcggcgtggttcatcaaaccacatggagaggcagctcca 435 |||||||||||||||||||||||| ||||| |||||||| |||||||||||||| ||||| Sbjct: 408 ctgtgtgttccgcaagggcagtcgtcgtggatcatcaaatcacatggagaggcaactcca 467 Query: 436 gtttacaggcataatgagtaacagacctgaagaaaacccagatttctacaactggaacag 495 ||||||||| ||| ||||||||| ||||||||| || || ||||||||||||||||| || Sbjct: 468 gtttacagggatattgagtaacaaacctgaagagaatcccgatttctacaactggaatag 527 Query: 496 agtgaaggttcggtattgtgatggtggatccttcaccggtgatggggctgacgcggcttc 555 ||||||||| ||||| |||||||||||||| ||||| |||||||| |||| |||||| | Sbjct: 528 agtgaaggtccggtactgtgatggtggatctttcactggtgatggctctgatgcggctgc 587 Query: 556 aggcctttatttccgaggtcagcgtatttggcaggctgccatggatgacttgatggccca 615 |||||||||||||||||||||||| ||||||||||| || ||||||||| | |||||||| Sbjct: 588 aggcctttatttccgaggtcagcgcatttggcaggccgctatggatgacctaatggccca 647 Query: 616 gggaatgcgttctgctagtcaggcccttctttctggatgctctgc 660 |||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 648 aggaatgcgttatgctaatcaggcccttctttctggatgctctgc 692
>gb|AY107261.1| Zea mays PCO091441 mRNA sequence Length = 1409 Score = 440 bits (222), Expect = e-120 Identities = 345/386 (89%) Strand = Plus / Plus Query: 275 ggaagcttaccaggttaccacctacaccgaggatctggatcagggtcaaacaattggctt 334 ||||||||||||||||||||||| ||| |||| | ||||||||| |||||| |||||| Sbjct: 1 ggaagcttaccaggttaccacctccacagagggtttggatcaggagcaaacagttggctc 60 Query: 335 gtcaatctggagggtggaggctggtgcaatgatgttaaaagctgtgtgttccgcaagggc 394 |||||||| |||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 61 gtcaatctcgagggtggaggctggtgcaatgatcgcagcagctgtgtgttccgcaagggc 120 Query: 395 agtcggcgtggttcatcaaaccacatggagaggcagctccagtttacaggcataatgagt 454 ||||| ||||| |||||||| |||||||||||||| |||||||||||||| ||| ||||| Sbjct: 121 agtcgtcgtggatcatcaaatcacatggagaggcaactccagtttacagggatattgagt 180 Query: 455 aacagacctgaagaaaacccagatttctacaactggaacagagtgaaggttcggtattgt 514 |||| ||||||||| || || ||||||||||||||||| ||||||||||| ||||| ||| Sbjct: 181 aacaaacctgaagagaatcccgatttctacaactggaatagagtgaaggtccggtactgt 240 Query: 515 gatggtggatccttcaccggtgatggggctgacgcggcttcaggcctttatttccgaggt 574 ||||||||||| ||||| |||||||| |||| |||||| |||||||||||||||||||| Sbjct: 241 gatggtggatctttcactggtgatggctctgatgcggctgcaggcctttatttccgaggt 300 Query: 575 cagcgtatttggcaggctgccatggatgacttgatggcccagggaatgcgttctgctagt 634 ||||| ||||||||||| || ||||||||| | |||||||| |||||||||| ||||| | Sbjct: 301 cagcgcatttggcaggccgctatggatgacctaatggcccaaggaatgcgttatgctaat 360 Query: 635 caggcccttctttctggatgctctgc 660 |||||||||||||||||||||||||| Sbjct: 361 caggcccttctttctggatgctctgc 386
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 172 bits (87), Expect = 9e-40 Identities = 117/127 (92%) Strand = Plus / Plus Query: 345 agggtggaggctggtgcaatgatgttaaaagctgtgtgttccgcaagggcagtcggcgtg 404 ||||||||||||||||||| |||||||||||||| ||||| |||||| |||||||||||| Sbjct: 26288139 agggtggaggctggtgcaacgatgttaaaagctgcgtgtttcgcaagagcagtcggcgtg 26288198 Query: 405 gttcatcaaaccacatggagaggcagctccagtttacaggcataatgagtaacagacctg 464 |||||||||| ||||||||||| || ||||||||||| || |||||||||||||| |||| Sbjct: 26288199 gttcatcaaatcacatggagagccaactccagtttactgggataatgagtaacaggcctg 26288258 Query: 465 aagaaaa 471 ||||||| Sbjct: 26288259 aagaaaa 26288265 Score = 121 bits (61), Expect = 3e-24 Identities = 73/77 (94%) Strand = Plus / Plus Query: 475 agatttctacaactggaacagagtgaaggttcggtattgtgatggtggatccttcaccgg 534 ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| || Sbjct: 26288367 agatttctacaactggaacagagtgaaggttcgatattgtgatggcggatccttcactgg 26288426 Query: 535 tgatggggctgacgcgg 551 |||||||||||| |||| Sbjct: 26288427 tgatggggctgatgcgg 26288443 Score = 105 bits (53), Expect = 2e-19 Identities = 77/85 (90%) Strand = Plus / Plus Query: 263 gtatgcttggatggaagcttaccaggttaccacctacaccgaggatctggatcagggtca 322 |||||||||||||| ||||||||||| || |||||||||||||| | |||||||||| || Sbjct: 26287924 gtatgcttggatgggagcttaccagggtatcacctacaccgagggtttggatcaggggca 26287983 Query: 323 aacaattggcttgtcaatctggagg 347 |||| ||||||||||||| |||||| Sbjct: 26287984 aacagttggcttgtcaatttggagg 26288008 Score = 103 bits (52), Expect = 7e-19 Identities = 64/68 (94%) Strand = Plus / Plus Query: 555 caggcctttatttccgaggtcagcgtatttggcaggctgccatggatgacttgatggccc 614 |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 26288801 caggcctttatttccgaggtcagcgtatttggcaggctgctatggatgatctgatggccc 26288860 Query: 615 agggaatg 622 | |||||| Sbjct: 26288861 aaggaatg 26288868 Score = 60.0 bits (30), Expect = 1e-05 Identities = 98/121 (80%), Gaps = 6/121 (4%) Strand = Plus / Plus Query: 143 ggctccgagccgtgggcgaatgacacgcgggtctactccaccaatgccaactccggcagc 202 ||||| ||||||||| |||| | |||| |||||||||||||||||||||||| Sbjct: 26287184 ggctctgagccgtggctgaatcagacgcaggtctactccaccaatgccaactc------t 26287237 Query: 203 ggcagcaacggcgccttcgtcgccctcaccctcatccagtccgccgccgccaagggagcc 262 || ||||| |||| |||||||| | || ||||||||||| || ||||||||||||||| Sbjct: 26287238 ggtagcaatggcgtcttcgtcgggattacgctcatccagtcggcggccgccaagggagcc 26287297 Query: 263 g 263 | Sbjct: 26287298 g 26287298 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 635 caggcccttctttctggatgctctgct 661 ||||| ||||||||||||||||||||| Sbjct: 26288973 caggcacttctttctggatgctctgct 26288999
>dbj|AP004334.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0455H11 Length = 101607 Score = 172 bits (87), Expect = 9e-40 Identities = 117/127 (92%) Strand = Plus / Plus Query: 345 agggtggaggctggtgcaatgatgttaaaagctgtgtgttccgcaagggcagtcggcgtg 404 ||||||||||||||||||| |||||||||||||| ||||| |||||| |||||||||||| Sbjct: 62767 agggtggaggctggtgcaacgatgttaaaagctgcgtgtttcgcaagagcagtcggcgtg 62826 Query: 405 gttcatcaaaccacatggagaggcagctccagtttacaggcataatgagtaacagacctg 464 |||||||||| ||||||||||| || ||||||||||| || |||||||||||||| |||| Sbjct: 62827 gttcatcaaatcacatggagagccaactccagtttactgggataatgagtaacaggcctg 62886 Query: 465 aagaaaa 471 ||||||| Sbjct: 62887 aagaaaa 62893 Score = 121 bits (61), Expect = 3e-24 Identities = 73/77 (94%) Strand = Plus / Plus Query: 475 agatttctacaactggaacagagtgaaggttcggtattgtgatggtggatccttcaccgg 534 ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| || Sbjct: 62995 agatttctacaactggaacagagtgaaggttcgatattgtgatggcggatccttcactgg 63054 Query: 535 tgatggggctgacgcgg 551 |||||||||||| |||| Sbjct: 63055 tgatggggctgatgcgg 63071 Score = 105 bits (53), Expect = 2e-19 Identities = 77/85 (90%) Strand = Plus / Plus Query: 263 gtatgcttggatggaagcttaccaggttaccacctacaccgaggatctggatcagggtca 322 |||||||||||||| ||||||||||| || |||||||||||||| | |||||||||| || Sbjct: 62552 gtatgcttggatgggagcttaccagggtatcacctacaccgagggtttggatcaggggca 62611 Query: 323 aacaattggcttgtcaatctggagg 347 |||| ||||||||||||| |||||| Sbjct: 62612 aacagttggcttgtcaatttggagg 62636 Score = 103 bits (52), Expect = 7e-19 Identities = 64/68 (94%) Strand = Plus / Plus Query: 555 caggcctttatttccgaggtcagcgtatttggcaggctgccatggatgacttgatggccc 614 |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 63429 caggcctttatttccgaggtcagcgtatttggcaggctgctatggatgatctgatggccc 63488 Query: 615 agggaatg 622 | |||||| Sbjct: 63489 aaggaatg 63496 Score = 60.0 bits (30), Expect = 1e-05 Identities = 98/121 (80%), Gaps = 6/121 (4%) Strand = Plus / Plus Query: 143 ggctccgagccgtgggcgaatgacacgcgggtctactccaccaatgccaactccggcagc 202 ||||| ||||||||| |||| | |||| |||||||||||||||||||||||| Sbjct: 61812 ggctctgagccgtggctgaatcagacgcaggtctactccaccaatgccaactc------t 61865 Query: 203 ggcagcaacggcgccttcgtcgccctcaccctcatccagtccgccgccgccaagggagcc 262 || ||||| |||| |||||||| | || ||||||||||| || ||||||||||||||| Sbjct: 61866 ggtagcaatggcgtcttcgtcgggattacgctcatccagtcggcggccgccaagggagcc 61925 Query: 263 g 263 | Sbjct: 61926 g 61926 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 635 caggcccttctttctggatgctctgct 661 ||||| ||||||||||||||||||||| Sbjct: 63601 caggcacttctttctggatgctctgct 63627
>dbj|AP003752.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1332_C12 Length = 67349 Score = 172 bits (87), Expect = 9e-40 Identities = 117/127 (92%) Strand = Plus / Plus Query: 345 agggtggaggctggtgcaatgatgttaaaagctgtgtgttccgcaagggcagtcggcgtg 404 ||||||||||||||||||| |||||||||||||| ||||| |||||| |||||||||||| Sbjct: 7717 agggtggaggctggtgcaacgatgttaaaagctgcgtgtttcgcaagagcagtcggcgtg 7776 Query: 405 gttcatcaaaccacatggagaggcagctccagtttacaggcataatgagtaacagacctg 464 |||||||||| ||||||||||| || ||||||||||| || |||||||||||||| |||| Sbjct: 7777 gttcatcaaatcacatggagagccaactccagtttactgggataatgagtaacaggcctg 7836 Query: 465 aagaaaa 471 ||||||| Sbjct: 7837 aagaaaa 7843 Score = 121 bits (61), Expect = 3e-24 Identities = 73/77 (94%) Strand = Plus / Plus Query: 475 agatttctacaactggaacagagtgaaggttcggtattgtgatggtggatccttcaccgg 534 ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| || Sbjct: 7945 agatttctacaactggaacagagtgaaggttcgatattgtgatggcggatccttcactgg 8004 Query: 535 tgatggggctgacgcgg 551 |||||||||||| |||| Sbjct: 8005 tgatggggctgatgcgg 8021 Score = 105 bits (53), Expect = 2e-19 Identities = 77/85 (90%) Strand = Plus / Plus Query: 263 gtatgcttggatggaagcttaccaggttaccacctacaccgaggatctggatcagggtca 322 |||||||||||||| ||||||||||| || |||||||||||||| | |||||||||| || Sbjct: 7502 gtatgcttggatgggagcttaccagggtatcacctacaccgagggtttggatcaggggca 7561 Query: 323 aacaattggcttgtcaatctggagg 347 |||| ||||||||||||| |||||| Sbjct: 7562 aacagttggcttgtcaatttggagg 7586 Score = 103 bits (52), Expect = 7e-19 Identities = 64/68 (94%) Strand = Plus / Plus Query: 555 caggcctttatttccgaggtcagcgtatttggcaggctgccatggatgacttgatggccc 614 |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 8379 caggcctttatttccgaggtcagcgtatttggcaggctgctatggatgatctgatggccc 8438 Query: 615 agggaatg 622 | |||||| Sbjct: 8439 aaggaatg 8446 Score = 60.0 bits (30), Expect = 1e-05 Identities = 98/121 (80%), Gaps = 6/121 (4%) Strand = Plus / Plus Query: 143 ggctccgagccgtgggcgaatgacacgcgggtctactccaccaatgccaactccggcagc 202 ||||| ||||||||| |||| | |||| |||||||||||||||||||||||| Sbjct: 6762 ggctctgagccgtggctgaatcagacgcaggtctactccaccaatgccaactc------t 6815 Query: 203 ggcagcaacggcgccttcgtcgccctcaccctcatccagtccgccgccgccaagggagcc 262 || ||||| |||| |||||||| | || ||||||||||| || ||||||||||||||| Sbjct: 6816 ggtagcaatggcgtcttcgtcgggattacgctcatccagtcggcggccgccaagggagcc 6875 Query: 263 g 263 | Sbjct: 6876 g 6876 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 635 caggcccttctttctggatgctctgct 661 ||||| ||||||||||||||||||||| Sbjct: 8551 caggcacttctttctggatgctctgct 8577
>dbj|AK060807.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-G03, full insert sequence Length = 1466 Score = 65.9 bits (33), Expect = 2e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 589 ggctgccatggatgacttgatggcccagggaatgcgttctgctagtcaggcccttctttc 648 |||||| |||||||| |||||||||| |||||| | | ||||| ||||| |||||||| Sbjct: 1 ggctgctatggatgatctgatggcccaaggaatgagatatgctaaccaggcacttctttc 60 Query: 649 tggatgctctgct 661 ||||||||||||| Sbjct: 61 tggatgctctgct 73
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 473 ccagatttctacaactggaacagagtgaaggttcggtattgtgatgg 519 |||||||||||||| ||||||| || ||||||||||| |||||||| Sbjct: 28955140 ccagatttctacaattggaacaaggtcaaggttcggtactgtgatgg 28955186
>dbj|AP005825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0724B10 Length = 169143 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 473 ccagatttctacaactggaacagagtgaaggttcggtattgtgatgg 519 |||||||||||||| ||||||| || ||||||||||| |||||||| Sbjct: 1305 ccagatttctacaattggaacaaggtcaaggttcggtactgtgatgg 1351
>dbj|AP004052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1218_D07 Length = 114511 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 473 ccagatttctacaactggaacagagtgaaggttcggtattgtgatgg 519 |||||||||||||| ||||||| || ||||||||||| |||||||| Sbjct: 38198 ccagatttctacaattggaacaaggtcaaggttcggtactgtgatgg 38244
>emb|X99348.1|VRPECASE V.radiata mRNA for pectinacetylesterase Length = 1469 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 473 ccagatttctacaactggaacagagtgaaggttcggtattgtgatgg 519 |||||||||||| | ||||||||| | |||||| ||||||||||||| Sbjct: 430 ccagatttctacgattggaacagaatcaaggttaggtattgtgatgg 476
>ref|NM_100826.2| Arabidopsis thaliana carboxylic ester hydrolase AT1G09550 mRNA, complete cds Length = 1240 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 467 gaaaacccagatttctacaactggaacagagtgaaggttcggtattgtgatggtggatcc 526 ||||| ||||| || ||||| ||||||| ||| || || |||||||||||||||| |||| Sbjct: 443 gaaaatccagacttttacaattggaacaaagtaaaagtccggtattgtgatggtgcatcc 502 Query: 527 tt 528 || Sbjct: 503 tt 504
>ref|XM_467338.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1677 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 470 aacccagatttctacaactggaacagagtgaaggttcggtattgtgatgg 519 ||||| ||||||||||| ||||||| || ||||||||||| |||||||| Sbjct: 542 aacccggatttctacaattggaacaaggtcaaggttcggtactgtgatgg 591
>dbj|AK068668.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013158P10, full insert sequence Length = 1678 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 470 aacccagatttctacaactggaacagagtgaaggttcggtattgtgatgg 519 ||||| ||||||||||| ||||||| || ||||||||||| |||||||| Sbjct: 543 aacccggatttctacaattggaacaaggtcaaggttcggtactgtgatgg 592
>ref|NM_104556.3| Arabidopsis thaliana carboxylic ester hydrolase AT1G57590 mRNA, complete cds Length = 1488 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 485 aactggaacagagtgaaggttcggtattgtgatggtggatc 525 |||||||| ||||| || |||||||||||||| |||||||| Sbjct: 557 aactggaatagagtaaaagttcggtattgtgacggtggatc 597
>gb|AC079733.1| Arabidopsis thaliana chromosome 1 BAC T8L23 genomic sequence, complete sequence Length = 90448 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 485 aactggaacagagtgaaggttcggtattgtgatggtggatc 525 |||||||| ||||| || |||||||||||||| |||||||| Sbjct: 19605 aactggaatagagtaaaagttcggtattgtgacggtggatc 19565
>gb|AY123981.1| Arabidopsis thaliana At1g57590/T8L23_6 mRNA, complete cds Length = 1375 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 485 aactggaacagagtgaaggttcggtattgtgatggtggatc 525 |||||||| ||||| || |||||||||||||| |||||||| Sbjct: 443 aactggaatagagtaaaagttcggtattgtgacggtggatc 483
>dbj|AK064109.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-G02, full insert sequence Length = 1483 Score = 48.1 bits (24), Expect = 0.037 Identities = 45/52 (86%) Strand = Plus / Plus Query: 470 aacccagatttctacaactggaacagagtgaaggttcggtattgtgatggtg 521 ||||||||||| ||||||||||||| || ||| | ||||||||||||||| Sbjct: 459 aacccagatttttacaactggaacaaggtcaagatcaggtattgtgatggtg 510
>ref|NM_118061.3| Arabidopsis thaliana carboxylic ester hydrolase AT4G19410 mRNA, complete cds Length = 1475 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 470 aacccagatttctacaactggaacaga 496 ||||||||||||||||| ||||||||| Sbjct: 451 aacccagatttctacaattggaacaga 477
>ref|NM_202538.1| Arabidopsis thaliana carboxylic ester hydrolase AT3G09410 transcript variant AT3G09410.3 mRNA, complete cds Length = 1699 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 329 tggcttgtcaatctggagggtggaggctggtgcaa 363 |||||||| || |||||||||||||||||||||| Sbjct: 289 tggcttgttcatttggagggtggaggctggtgcaa 323
>ref|NM_111775.3| Arabidopsis thaliana carboxylic ester hydrolase AT3G09410 transcript variant AT3G09410.1 mRNA, complete cds Length = 1721 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 329 tggcttgtcaatctggagggtggaggctggtgcaa 363 |||||||| || |||||||||||||||||||||| Sbjct: 305 tggcttgttcatttggagggtggaggctggtgcaa 339
>ref|XM_365358.1| Magnaporthe grisea 70-15 hypothetical protein (MG02060.4) partial mRNA Length = 1143 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 275 ggaagcttaccaggttaccacct 297 ||||||||||||||||||||||| Sbjct: 1116 ggaagcttaccaggttaccacct 1138
>gb|AC003970.1| Arabidopsis thaliana chromosome I BAC F14J9 genomic sequence contains phyA marker, complete sequence Length = 95865 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Minus Query: 482 tacaactggaacagagtgaaggttcggtattgtgatggtggatcctt 528 ||||| ||||||| ||| || || |||||||||||||||| |||||| Sbjct: 73072 tacaattggaacaaagtaaaagtccggtattgtgatggtgcatcctt 73026
>gb|AY064626.1| Arabidopsis thaliana putative pectinacetylesterase protein (At4g19410; T5K18.190) mRNA, complete cds Length = 1248 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 470 aacccagatttctacaactggaacaga 496 ||||||||||||||||| ||||||||| Sbjct: 319 aacccagatttctacaattggaacaga 345
>gb|AC157894.3| Medicago truncatula chromosome 7 BAC clone mth2-85d15, complete sequence Length = 127331 Score = 46.1 bits (23), Expect = 0.15 Identities = 59/71 (83%) Strand = Plus / Plus Query: 266 tgcttggatggaagcttaccaggttaccacctacaccgaggatctggatcagggtcaaac 325 ||||||||||||| ||||| |||||||| | ||||| |||| ||||||||| || || Sbjct: 17385 tgcttggatggaacattacctggttaccatttgcaccgtggatatggatcaggagcagac 17444 Query: 326 aattggcttgt 336 | ||||||||| Sbjct: 17445 agttggcttgt 17455 Score = 42.1 bits (21), Expect = 2.3 Identities = 42/49 (85%) Strand = Plus / Plus Query: 474 cagatttctacaactggaacagagtgaaggttcggtattgtgatggtgg 522 ||||||| | ||||||||| |||| ||| |||| |||||||||||||| Sbjct: 17959 cagattttttcaactggaatagagcaaagcttcgttattgtgatggtgg 18007
>dbj|AK222036.1| Arabidopsis thaliana mRNA for putative pectinacetylesterase protein, complete cds, clone: RAFL22-74-B18 Length = 1454 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 470 aacccagatttctacaactggaacaga 496 ||||||||||||||||| ||||||||| Sbjct: 459 aacccagatttctacaattggaacaga 485
>gb|AY054531.1| Arabidopsis thaliana putative pectinacetylesterase protein (At4g19410; T5K18.190) mRNA, complete cds Length = 1361 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 470 aacccagatttctacaactggaacaga 496 ||||||||||||||||| ||||||||| Sbjct: 382 aacccagatttctacaattggaacaga 408
>emb|BX822283.1|CNS0A4X2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB26ZC08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1640 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 329 tggcttgtcaatctggagggtggaggctggtgcaa 363 |||||||| || |||||||||||||||||||||| Sbjct: 306 tggcttgttcatttggagggtggaggctggtgcaa 340
>emb|BX826525.1|CNS0A44F Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB35ZD02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1369 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 470 aacccagatttctacaactggaacaga 496 ||||||||||||||||| ||||||||| Sbjct: 439 aacccagatttctacaattggaacaga 465
>emb|BX826511.1|CNS0A44U Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB33ZA10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1296 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 470 aacccagatttctacaactggaacaga 496 ||||||||||||||||| ||||||||| Sbjct: 373 aacccagatttctacaattggaacaga 399
>gb|AY087371.1| Arabidopsis thaliana clone 34674 mRNA, complete sequence Length = 1389 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 470 aacccagatttctacaactggaacaga 496 ||||||||||||||||| ||||||||| Sbjct: 428 aacccagatttctacaattggaacaga 454
>dbj|AP004520.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT05P01, TM0048, complete sequence Length = 110811 Score = 46.1 bits (23), Expect = 0.15 Identities = 53/63 (84%) Strand = Plus / Plus Query: 570 gaggtcagcgtatttggcaggctgccatggatgacttgatggcccagggaatgcgttctg 629 |||| |||||||||||| ||| || |||||||| |||||| | |||||||||||| || Sbjct: 101397 gaggacagcgtatttggtgggcggcaatggatgaattgatgtcaaagggaatgcgttttg 101456 Query: 630 cta 632 ||| Sbjct: 101457 cta 101459 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 634 tcaggcccttctttctggatgctc 657 |||||| ||||||||||||||||| Sbjct: 101557 tcaggctcttctttctggatgctc 101580
>ref|NM_123896.2| Arabidopsis thaliana carboxylic ester hydrolase AT5G45280 transcript variant AT5G45280.2 mRNA, complete cds Length = 1493 Score = 44.1 bits (22), Expect = 0.58 Identities = 55/66 (83%) Strand = Plus / Plus Query: 473 ccagatttctacaactggaacagagtgaaggttcggtattgtgatggtggatccttcacc 532 ||||| || ||||| ||||| ||| | || ||||||||||| |||||| ||| |||||| Sbjct: 435 ccagacttttacaattggaatagaatcaaagttcggtattgcgatggttcatctttcacc 494 Query: 533 ggtgat 538 |||||| Sbjct: 495 ggtgat 500
>ref|NM_180804.1| Arabidopsis thaliana carboxylic ester hydrolase AT5G45280 transcript variant AT5G45280.1 mRNA, complete cds Length = 1489 Score = 44.1 bits (22), Expect = 0.58 Identities = 55/66 (83%) Strand = Plus / Plus Query: 473 ccagatttctacaactggaacagagtgaaggttcggtattgtgatggtggatccttcacc 532 ||||| || ||||| ||||| ||| | || ||||||||||| |||||| ||| |||||| Sbjct: 435 ccagacttttacaattggaatagaatcaaagttcggtattgcgatggttcatctttcacc 494 Query: 533 ggtgat 538 |||||| Sbjct: 495 ggtgat 500
>gb|AC122803.4| Mus musculus BAC clone RP23-292K9 from 17, complete sequence Length = 149990 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 473 ccagatttctacaactggaaca 494 |||||||||||||||||||||| Sbjct: 98935 ccagatttctacaactggaaca 98956
>gb|AC019028.13| Mus musculus chromosome 5, clone RP23-88A22, complete sequence Length = 264425 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 cttctccctctccctcttccag 22 |||||||||||||||||||||| Sbjct: 12538 cttctccctctccctcttccag 12517
>gb|AC138101.8| Mus musculus chromosome 5, clone RP23-149H20, complete sequence Length = 211521 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 cttctccctctccctcttccag 22 |||||||||||||||||||||| Sbjct: 91997 cttctccctctccctcttccag 91976
>gb|AC137831.27| Medicago truncatula clone mth2-34o21, complete sequence Length = 117693 Score = 44.1 bits (22), Expect = 0.58 Identities = 40/46 (86%) Strand = Plus / Plus Query: 474 cagatttctacaactggaacagagtgaaggttcggtattgtgatgg 519 ||||||||| |||||||||||||| || || ||||| |||||||| Sbjct: 53423 cagatttctttaactggaacagagtcaaagtgcggtactgtgatgg 53468
>gb|AY150453.1| Arabidopsis thaliana putative pectin acetylesterase (At5g45280) mRNA, complete cds Length = 1144 Score = 44.1 bits (22), Expect = 0.58 Identities = 55/66 (83%) Strand = Plus / Plus Query: 473 ccagatttctacaactggaacagagtgaaggttcggtattgtgatggtggatccttcacc 532 ||||| || ||||| ||||| ||| | || ||||||||||| |||||| ||| |||||| Sbjct: 322 ccagacttttacaattggaatagaatcaaagttcggtattgcgatggttcatctttcacc 381 Query: 533 ggtgat 538 |||||| Sbjct: 382 ggtgat 387
>gb|AY056198.1| Arabidopsis thaliana putative pectin acetylesterase (At5g45280) mRNA, complete cds Length = 1508 Score = 44.1 bits (22), Expect = 0.58 Identities = 55/66 (83%) Strand = Plus / Plus Query: 473 ccagatttctacaactggaacagagtgaaggttcggtattgtgatggtggatccttcacc 532 ||||| || ||||| ||||| ||| | || ||||||||||| |||||| ||| |||||| Sbjct: 435 ccagacttttacaattggaatagaatcaaagttcggtattgcgatggttcatctttcacc 494 Query: 533 ggtgat 538 |||||| Sbjct: 495 ggtgat 500
>gb|AY057665.1| Arabidopsis thaliana AT5g45280/K9E15_6 mRNA, complete cds Length = 1405 Score = 44.1 bits (22), Expect = 0.58 Identities = 55/66 (83%) Strand = Plus / Plus Query: 473 ccagatttctacaactggaacagagtgaaggttcggtattgtgatggtggatccttcacc 532 ||||| || ||||| ||||| ||| | || ||||||||||| |||||| ||| |||||| Sbjct: 435 ccagacttttacaattggaatagaatcaaagttcggtattgcgatggttcatctttcacc 494 Query: 533 ggtgat 538 |||||| Sbjct: 495 ggtgat 500
>emb|BX831894.1|CNS09ZRV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH37ZH11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1299 Score = 44.1 bits (22), Expect = 0.58 Identities = 55/66 (83%) Strand = Plus / Plus Query: 473 ccagatttctacaactggaacagagtgaaggttcggtattgtgatggtggatccttcacc 532 ||||| || ||||| ||||| ||| | || ||||||||||| |||||| ||| |||||| Sbjct: 398 ccagacttttacaattggaatagaatcaaagttcggtattgcgatggttcatctttcacc 457 Query: 533 ggtgat 538 |||||| Sbjct: 458 ggtgat 463
>gb|AY087860.1| Arabidopsis thaliana clone 39005 mRNA, complete sequence Length = 1403 Score = 44.1 bits (22), Expect = 0.58 Identities = 55/66 (83%) Strand = Plus / Plus Query: 473 ccagatttctacaactggaacagagtgaaggttcggtattgtgatggtggatccttcacc 532 ||||| || ||||| ||||| ||| | || ||||||||||| |||||| ||| |||||| Sbjct: 428 ccagacttttacaattggaatagaatcaaagttcggtattgcgatggttcatctttcacc 487 Query: 533 ggtgat 538 |||||| Sbjct: 488 ggtgat 493
>gb|AC013622.12| Mus musculus chromosome 5, clone RP23-232H18, complete sequence Length = 240821 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 cttctccctctccctcttccag 22 |||||||||||||||||||||| Sbjct: 36151 cttctccctctccctcttccag 36172
>ref|NM_111465.2| Arabidopsis thaliana carboxylic ester hydrolase AT3G05910 mRNA, complete cds Length = 1797 Score = 42.1 bits (21), Expect = 2.3 Identities = 72/89 (80%) Strand = Plus / Plus Query: 419 atggagaggcagctccagtttacaggcataatgagtaacagacctgaagaaaacccagat 478 ||||||| ||||| ||||||||||| ||| ||||| ||| | || ||||||| || || Sbjct: 687 atggagaaacagcttcagtttacaggaatactgagtgacaaagctcaagaaaatcctgac 746 Query: 479 ttctacaactggaacagagtgaaggttcg 507 || | ||||||||| ||||| ||| |||| Sbjct: 747 tttttcaactggaatagagttaagcttcg 775
>gb|AC137621.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0111O13, complete sequence Length = 126332 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 189 ccaactccggcagcggcagcaacggcgcc 217 |||||||||||||| |||||| ||||||| Sbjct: 98589 ccaactccggcagctgcagcagcggcgcc 98617
>ref|XM_878265.1| PREDICTED: Bos taurus similar to adrenocortical dysplasia homolog, transcript variant 4 (LOC510353), mRNA Length = 1861 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 gttcttggccccttcttgccc 110 ||||||||||||||||||||| Sbjct: 140 gttcttggccccttcttgccc 160
>ref|XM_878226.1| PREDICTED: Bos taurus similar to adrenocortical dysplasia homolog, transcript variant 3 (LOC510353), mRNA Length = 1846 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 gttcttggccccttcttgccc 110 ||||||||||||||||||||| Sbjct: 140 gttcttggccccttcttgccc 160
>ref|XM_878188.1| PREDICTED: Bos taurus similar to adrenocortical dysplasia homolog, transcript variant 2 (LOC510353), mRNA Length = 1871 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 gttcttggccccttcttgccc 110 ||||||||||||||||||||| Sbjct: 140 gttcttggccccttcttgccc 160
>ref|XM_587483.2| PREDICTED: Bos taurus similar to adrenocortical dysplasia homolog, transcript variant 1 (LOC510353), mRNA Length = 1891 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 gttcttggccccttcttgccc 110 ||||||||||||||||||||| Sbjct: 140 gttcttggccccttcttgccc 160
>gb|AC147348.2| Xenopus tropicalis clone CH216-122H9, complete sequence Length = 161088 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 362 aatgatgttaaaagctgtgtg 382 ||||||||||||||||||||| Sbjct: 87043 aatgatgttaaaagctgtgtg 87023
>gb|AC148406.12| Medicago truncatula clone mth2-46e9, complete sequence Length = 110272 Score = 42.1 bits (21), Expect = 2.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 485 aactggaacagagtgaaggttcggtattgtgatggtg 521 ||||||||||||||||| |||| || |||||||||| Sbjct: 82692 aactggaacagagtgaaaattcgttactgtgatggtg 82728 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 634 tcaggcccttctttctggatgctc 657 |||||| ||||||||||||||||| Sbjct: 83207 tcaggctcttctttctggatgctc 83230
>gb|AY096751.1| Arabidopsis thaliana putative pectinacetylesterase (At3g05910) mRNA, complete cds Length = 1279 Score = 42.1 bits (21), Expect = 2.3 Identities = 72/89 (80%) Strand = Plus / Plus Query: 419 atggagaggcagctccagtttacaggcataatgagtaacagacctgaagaaaacccagat 478 ||||||| ||||| ||||||||||| ||| ||||| ||| | || ||||||| || || Sbjct: 352 atggagaaacagcttcagtttacaggaatactgagtgacaaagctcaagaaaatcctgac 411 Query: 479 ttctacaactggaacagagtgaaggttcg 507 || | ||||||||| ||||| ||| |||| Sbjct: 412 tttttcaactggaatagagttaagcttcg 440
>gb|AY050847.1| Arabidopsis thaliana putative pectinacetylesterase (At3g05910) mRNA, complete cds Length = 1707 Score = 42.1 bits (21), Expect = 2.3 Identities = 72/89 (80%) Strand = Plus / Plus Query: 419 atggagaggcagctccagtttacaggcataatgagtaacagacctgaagaaaacccagat 478 ||||||| ||||| ||||||||||| ||| ||||| ||| | || ||||||| || || Sbjct: 608 atggagaaacagcttcagtttacaggaatactgagtgacaaagctcaagaaaatcctgac 667 Query: 479 ttctacaactggaacagagtgaaggttcg 507 || | ||||||||| ||||| ||| |||| Sbjct: 668 tttttcaactggaatagagttaagcttcg 696
>emb|Z35321.1|EV18SRN1 E.verticillata (EvF) gene for 18S ribosomal RNA Length = 1620 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 400 gcgtggttcatcaaaccacat 420 ||||||||||||||||||||| Sbjct: 1509 gcgtggttcatcaaaccacat 1529
>gb|AC094021.2| Homo sapiens chromosome 3 clone RP11-801L18, complete sequence Length = 214160 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 97 gccccttcttgccctgctcctcggg 121 |||||| |||||||||||||||||| Sbjct: 112937 gcccctgcttgccctgctcctcggg 112961
>gb|AC092045.2| Homo sapiens chromosome 3 clone RP11-168J18, complete sequence Length = 171343 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 97 gccccttcttgccctgctcctcggg 121 |||||| |||||||||||||||||| Sbjct: 64073 gcccctgcttgccctgctcctcggg 64049
>gb|AF428303.1|AF428303 Arabidopsis thaliana AT3g05910/F2O10_3 mRNA, complete cds Length = 1784 Score = 42.1 bits (21), Expect = 2.3 Identities = 72/89 (80%) Strand = Plus / Plus Query: 419 atggagaggcagctccagtttacaggcataatgagtaacagacctgaagaaaacccagat 478 ||||||| ||||| ||||||||||| ||| ||||| ||| | || ||||||| || || Sbjct: 683 atggagaaacagcttcagtttacaggaatactgagtgacaaagctcaagaaaatcctgac 742 Query: 479 ttctacaactggaacagagtgaaggttcg 507 || | ||||||||| ||||| ||| |||| Sbjct: 743 tttttcaactggaatagagttaagcttcg 771
>gb|AY626481.1| Cercaria batillariae lineage HL3 haplotype 5 cytochrome oxidase subunit I gene, partial cds; mitochondrial Length = 792 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 452 agtaacagacctgaagaaaac 472 ||||||||||||||||||||| Sbjct: 165 agtaacagacctgaagaaaac 145
>gb|AC022209.4|AC022209 Homo sapiens BAC clone RP11-588M21 from 11, complete sequence Length = 177314 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 451 gagtaacagacctgaagaaaa 471 ||||||||||||||||||||| Sbjct: 47139 gagtaacagacctgaagaaaa 47159
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 189 ccaactccggcagcggcagcaacggcgcc 217 |||||||||||||| |||||| ||||||| Sbjct: 2266158 ccaactccggcagctgcagcagcggcgcc 2266186 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 ccggcagcggcagcaacggc 214 |||||||||||||||||||| Sbjct: 18885426 ccggcagcggcagcaacggc 18885407
>dbj|AB020744.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K9E15 Length = 62052 Score = 42.1 bits (21), Expect = 2.3 Identities = 48/57 (84%) Strand = Plus / Plus Query: 482 tacaactggaacagagtgaaggttcggtattgtgatggtggatccttcaccggtgat 538 ||||| ||||| ||| | || ||||||||||| |||||| ||| |||||||||||| Sbjct: 29229 tacaattggaatagaatcaaagttcggtattgcgatggttcatctttcaccggtgat 29285
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 234 tcatccagtccgccgccgccaagg 257 |||||||||||| ||||||||||| Sbjct: 1529169 tcatccagtccgtcgccgccaagg 1529146
>gb|AC123692.25| Mus musculus chromosome 15, clone RP23-326B14, complete sequence Length = 202833 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 cttctccctctccctcttcc 20 |||||||||||||||||||| Sbjct: 75454 cttctccctctccctcttcc 75435
>gb|AC107085.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1764_D01, complete sequence Length = 164709 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 ccggcagcggcagcaacggc 214 |||||||||||||||||||| Sbjct: 52804 ccggcagcggcagcaacggc 52785
>ref|NM_176933.3| Mus musculus dual specificity phosphatase 4 (Dusp4), mRNA Length = 2428 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 196 cggcagcggcagcaacggcgcctt 219 ||||||||||||| |||||||||| Sbjct: 218 cggcagcggcagccacggcgcctt 241
>gb|AC092173.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0095J15, complete sequence Length = 156023 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 cttctccctctccctcttcc 20 |||||||||||||||||||| Sbjct: 112169 cttctccctctccctcttcc 112150
>gb|AC091238.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0022I16, complete sequence Length = 127068 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 cttctccctctccctcttcc 20 |||||||||||||||||||| Sbjct: 3596 cttctccctctccctcttcc 3577
>gb|AC144519.4| Mus musculus BAC clone RP24-325A1 from chromosome 6, complete sequence Length = 195499 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 cttctccctctccctcttcc 20 |||||||||||||||||||| Sbjct: 54651 cttctccctctccctcttcc 54632
>gb|AC134414.12| Mus musculus chromosome 15, clone RP24-70H12, complete sequence Length = 195834 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 cttctccctctccctcttcc 20 |||||||||||||||||||| Sbjct: 31205 cttctccctctccctcttcc 31186
>gb|AC135598.4| Oryza sativa chromosome 3 BAC OSJNBb0021K20 genomic sequence, complete sequence Length = 137220 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 cttctccctctccctcttcc 20 |||||||||||||||||||| Sbjct: 109800 cttctccctctccctcttcc 109819
>gb|AC102229.7| Mus musculus chromosome 15, clone RP24-70F9, complete sequence Length = 202156 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 cttctccctctccctcttcc 20 |||||||||||||||||||| Sbjct: 89588 cttctccctctccctcttcc 89607
>gb|AC110569.8| Mus musculus chromosome 15, clone RP23-309J17, complete sequence Length = 213398 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 cttctccctctccctcttcc 20 |||||||||||||||||||| Sbjct: 13482 cttctccctctccctcttcc 13501
>gb|AC107764.11| Mus musculus chromosome 15, clone RP23-179A6, complete sequence Length = 196178 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 cttctccctctccctcttcc 20 |||||||||||||||||||| Sbjct: 111087 cttctccctctccctcttcc 111068
>gb|AC120845.11| Mus musculus chromosome 3, clone RP23-468E4, complete sequence Length = 174129 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 cttctccctctccctcttcc 20 |||||||||||||||||||| Sbjct: 170556 cttctccctctccctcttcc 170537
>gb|AC122458.3| Mus musculus BAC clone RP24-270D10 from chromosome 8, complete sequence Length = 185268 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 196 cggcagcggcagcaacggcgcctt 219 ||||||||||||| |||||||||| Sbjct: 80197 cggcagcggcagccacggcgcctt 80220
>gb|BT013860.1| Lycopersicon esculentum clone 132840F, mRNA sequence Length = 1670 Score = 40.1 bits (20), Expect = 9.0 Identities = 35/40 (87%) Strand = Plus / Plus Query: 342 tggagggtggaggctggtgcaatgatgttaaaagctgtgt 381 ||||||||||||| |||||||| ||||| ||||||||| Sbjct: 383 tggagggtggaggatggtgcaacagtgttagaagctgtgt 422
>gb|AC161228.7| Mus musculus chromosome 3, clone RP24-77I5, complete sequence Length = 222551 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 cttctccctctccctcttcc 20 |||||||||||||||||||| Sbjct: 172103 cttctccctctccctcttcc 172122
>gb|AC113033.13| Mus musculus chromosome 7, clone RP23-220I5, complete sequence Length = 177962 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 cttctccctctccctcttcc 20 |||||||||||||||||||| Sbjct: 99406 cttctccctctccctcttcc 99425
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 cttctccctctccctcttcc 20 |||||||||||||||||||| Sbjct: 17387423 cttctccctctccctcttcc 17387442
>gb|AC166164.2| Mus musculus BAC clone RP23-394K2 from chromosome 17, complete sequence Length = 197143 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 cttctccctctccctcttcc 20 |||||||||||||||||||| Sbjct: 128267 cttctccctctccctcttcc 128286
>gb|AC137154.2| Mus musculus BAC clone RP24-572L22 from chromosome 5, complete sequence Length = 173460 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 cttctccctctccctcttcc 20 |||||||||||||||||||| Sbjct: 47882 cttctccctctccctcttcc 47863
>emb|AJ012166.1|CFA012166 Canis familiaris TCTA gene, AMT gene, NICN1 gene, DAG1 gene and BSN gene (partial) Length = 162073 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 cttctccctctccctcttcc 20 |||||||||||||||||||| Sbjct: 112628 cttctccctctccctcttcc 112647 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 cttctccctctccctcttcc 20 |||||||||||||||||||| Sbjct: 45429 cttctccctctccctcttcc 45448
>gb|AC123985.10| Mus musculus chromosome 14, clone RP23-154G18, complete sequence Length = 229313 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 cttctccctctccctcttcc 20 |||||||||||||||||||| Sbjct: 78783 cttctccctctccctcttcc 78764
>gb|AC132464.3| Mus musculus BAC clone RP23-53K19 from chromosome 18, complete sequence Length = 175801 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 cttctccctctccctcttcc 20 |||||||||||||||||||| Sbjct: 118414 cttctccctctccctcttcc 118395
>ref|XM_810785.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053507521.60) partial mRNA Length = 480 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 486 actggaacagagtgaaggtt 505 |||||||||||||||||||| Sbjct: 239 actggaacagagtgaaggtt 258
>gb|AC124687.4| Mus musculus BAC clone RP24-447D15 from chromosome 13, complete sequence Length = 176871 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 cttctccctctccctcttcc 20 |||||||||||||||||||| Sbjct: 48200 cttctccctctccctcttcc 48181
>gb|AC122859.4| Mus musculus BAC clone RP23-133M12 from 6, complete sequence Length = 187791 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 cttctccctctccctcttcc 20 |||||||||||||||||||| Sbjct: 32991 cttctccctctccctcttcc 33010
>gb|AC098745.4| Mus musculus BAC clone RP23-122P16 from 18, complete sequence Length = 213331 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 cttctccctctccctcttcc 20 |||||||||||||||||||| Sbjct: 16909 cttctccctctccctcttcc 16890
>emb|Z95889.1|HS211A9 Human DNA sequence from clone CTA-211A9 on chromosome 22q12.1, complete sequence Length = 117939 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 cttctccctctccctcttcc 20 |||||||||||||||||||| Sbjct: 31442 cttctccctctccctcttcc 31461
>emb|AL669983.2| Human DNA sequence from clone RP11-220D10 on chromosome 9 Contains a ribosomal protein L35 (RPL35) pseudogene, complete sequence Length = 60725 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 636 aggcccttctttctggatgc 655 |||||||||||||||||||| Sbjct: 22684 aggcccttctttctggatgc 22703
>emb|AL590080.25| Human DNA sequence from clone RP11-469M1 on chromosome 10 Contains the HHEX gene for hematopoietically expressed homeobox, the 5' end of the gene for SEC15 (S. cerevisiae)-like (SEC15L), a eukaryotic translation initiation factor 2 subunit 2 (eIF-2-beta) pseudogene and four CpG islands, complete sequence Length = 190144 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 cttctccctctccctcttcc 20 |||||||||||||||||||| Sbjct: 66112 cttctccctctccctcttcc 66131
>gb|AC164578.5| Mus musculus BAC RP23-15E20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 225564 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 cttctccctctccctcttcc 20 |||||||||||||||||||| Sbjct: 99256 cttctccctctccctcttcc 99275
>gb|DQ445142.1| Beta vulgaris chromosome 9 clone BAC123 genomic sequence Length = 31403 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 tctccctctccctcttccag 22 |||||||||||||||||||| Sbjct: 6223 tctccctctccctcttccag 6242
>gb|AC010307.7| Homo sapiens chromosome 5 clone CTB-49A3, complete sequence Length = 198410 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 ggaagggcggatggccatgggttc 93 ||||||||||||| |||||||||| Sbjct: 91739 ggaagggcggatgcccatgggttc 91762
>gb|AC113348.2| Homo sapiens chromosome 5 clone CTD-2537M22, complete sequence Length = 80723 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 407 tcatcaaaccacatggagag 426 |||||||||||||||||||| Sbjct: 10543 tcatcaaaccacatggagag 10524
>gb|AC026741.6| Homo sapiens chromosome 5 clone CTD-2653M23, complete sequence Length = 195849 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 cataatgagtaacagacctg 464 |||||||||||||||||||| Sbjct: 15573 cataatgagtaacagacctg 15592
>dbj|AK165991.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched library, clone:G730027H02 product:dual specificity phosphatase 4, full insert sequence Length = 2744 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 196 cggcagcggcagcaacggcgcctt 219 ||||||||||||| |||||||||| Sbjct: 532 cggcagcggcagccacggcgcctt 555
>gb|AC008902.5| Homo sapiens chromosome 5 clone CTD-2249G23, complete sequence Length = 101352 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 445 cataatgagtaacagacctg 464 |||||||||||||||||||| Sbjct: 8757 cataatgagtaacagacctg 8738
>gb|AC154542.2| Mus musculus BAC clone RP23-458O22 from chromosome 17, complete sequence Length = 191836 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 cttctccctctccctcttcc 20 |||||||||||||||||||| Sbjct: 162020 cttctccctctccctcttcc 162001
>gb|AC153651.4| Mus musculus BAC clone RP24-74B24 from chromosome 7, complete sequence Length = 256298 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 cttctccctctccctcttcc 20 |||||||||||||||||||| Sbjct: 15031 cttctccctctccctcttcc 15050
>gb|AC132949.4| Mus musculus BAC clone RP24-547H18 from chromosome 7, complete sequence Length = 206116 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 cttctccctctccctcttcc 20 |||||||||||||||||||| Sbjct: 104300 cttctccctctccctcttcc 104281
>dbj|AK080964.1| Mus musculus 4 days neonate male adipose cDNA, RIKEN full-length enriched library, clone:B430220P13 product:dual specificity phosphatase 4, full insert sequence Length = 2428 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 196 cggcagcggcagcaacggcgcctt 219 ||||||||||||| |||||||||| Sbjct: 218 cggcagcggcagccacggcgcctt 241
>dbj|AK053746.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130306H24 product:dual specificity phosphatase 4, full insert sequence Length = 1699 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 196 cggcagcggcagcaacggcgcctt 219 ||||||||||||| |||||||||| Sbjct: 215 cggcagcggcagccacggcgcctt 238
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 cttctccctctccctcttcc 20 |||||||||||||||||||| Sbjct: 8282410 cttctccctctccctcttcc 8282429
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 cttctccctctccctcttcc 20 |||||||||||||||||||| Sbjct: 5240398 cttctccctctccctcttcc 5240379
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 cttctccctctccctcttcc 20 |||||||||||||||||||| Sbjct: 17041826 cttctccctctccctcttcc 17041845
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 cttctccctctccctcttcc 20 |||||||||||||||||||| Sbjct: 17380964 cttctccctctccctcttcc 17380983
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 9.0 Identities = 41/48 (85%) Strand = Plus / Minus Query: 474 cagatttctacaactggaacagagtgaaggttcggtattgtgatggtg 521 ||||||| ||||||||||||| || ||| | ||||||||||||||| Sbjct: 43061968 cagatttttacaactggaacaaggtcaagatcaggtattgtgatggtg 43061921 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 475 agatttctacaactggaacagagt 498 |||||| ||||||||||||||||| Sbjct: 38807716 agatttttacaactggaacagagt 38807693
>emb|AL928891.20| Mouse DNA sequence from clone RP23-17O9 on chromosome 2, complete sequence Length = 163057 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 tctccctctccctcttccag 22 |||||||||||||||||||| Sbjct: 17680 tctccctctccctcttccag 17699
>dbj|AP003627.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0459B04 Length = 142475 Score = 40.1 bits (20), Expect = 9.0 Identities = 41/48 (85%) Strand = Plus / Minus Query: 474 cagatttctacaactggaacagagtgaaggttcggtattgtgatggtg 521 ||||||| ||||||||||||| || ||| | ||||||||||||||| Sbjct: 58997 cagatttttacaactggaacaaggtcaagatcaggtattgtgatggtg 58950
>dbj|AP003407.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1078G07 Length = 199457 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 475 agatttctacaactggaacagagt 498 |||||| ||||||||||||||||| Sbjct: 80598 agatttttacaactggaacagagt 80575
>gb|AC126915.2| Homo sapiens chromosome 5 clone RP11-21I4, complete sequence Length = 144199 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 407 tcatcaaaccacatggagag 426 |||||||||||||||||||| Sbjct: 142997 tcatcaaaccacatggagag 142978
>gb|AC141876.4| Mus musculus BAC clone RP24-289M9 from chromosome 6, complete sequence Length = 151702 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 cttctccctctccctcttcc 20 |||||||||||||||||||| Sbjct: 140458 cttctccctctccctcttcc 140439
>dbj|AP005655.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0025H07 Length = 145605 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 cttctccctctccctcttcc 20 |||||||||||||||||||| Sbjct: 35485 cttctccctctccctcttcc 35504
>emb|AL929153.11| Mouse DNA sequence from clone RP23-55C8 on chromosome 2, complete sequence Length = 116887 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 cttctccctctccctcttcc 20 |||||||||||||||||||| Sbjct: 108481 cttctccctctccctcttcc 108462
>dbj|AK110377.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-165-C08, full insert sequence Length = 2609 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 ccggcagcggcagcaacggc 214 |||||||||||||||||||| Sbjct: 942 ccggcagcggcagcaacggc 961
>dbj|AK068437.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156H21, full insert sequence Length = 2120 Score = 40.1 bits (20), Expect = 9.0 Identities = 44/52 (84%) Strand = Plus / Plus Query: 468 aaaacccagatttctacaactggaacagagtgaaggttcggtattgtgatgg 519 ||||||||||||| ||||| ||||| | ||| ||| | ||||||||||||| Sbjct: 412 aaaacccagatttttacaattggaataaagttaagataaggtattgtgatgg 463
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 193 ctccggcagcggcagcaacggcgccttcgtcg 224 |||||||| |||| ||||||||||| |||||| Sbjct: 3357067 ctccggcatcggccgcaacggcgccatcgtcg 3357036
>gb|AC108828.17| Mus musculus chromosome 5, clone RP23-153H17, complete sequence Length = 218103 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 cttctccctctccctcttcc 20 |||||||||||||||||||| Sbjct: 180318 cttctccctctccctcttcc 180299
>dbj|AP003732.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-682D22, complete sequence Length = 193132 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 cttctccctctccctcttcc 20 |||||||||||||||||||| Sbjct: 54121 cttctccctctccctcttcc 54102
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 ccttcgtcgccctcaccctc 235 |||||||||||||||||||| Sbjct: 3867826 ccttcgtcgccctcaccctc 3867845
>emb|AL732365.17| Mouse DNA sequence from clone RP23-357O2 on chromosome X, complete sequence Length = 192659 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 cttctccctctccctcttcc 20 |||||||||||||||||||| Sbjct: 113142 cttctccctctccctcttcc 113161
>emb|AL928812.11| Mouse DNA sequence from clone RP23-321B23 on chromosome 2, complete sequence Length = 199019 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 cttctccctctccctcttcc 20 |||||||||||||||||||| Sbjct: 46706 cttctccctctccctcttcc 46687
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 cttctccctctccctcttcc 20 |||||||||||||||||||| Sbjct: 5241185 cttctccctctccctcttcc 5241166
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 cttctccctctccctcttcc 20 |||||||||||||||||||| Sbjct: 8282291 cttctccctctccctcttcc 8282310
>emb|AL772416.6|CNS08C9U Oryza sativa chromosome 12, . BAC OSJNBa0095H15 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 142670 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 cttctccctctccctcttcc 20 |||||||||||||||||||| Sbjct: 60485 cttctccctctccctcttcc 60466
>dbj|AP006657.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT05H03, TM0342b, complete sequence Length = 58173 Score = 40.1 bits (20), Expect = 9.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 474 cagatttctacaactggaacagagtgaaggttcggtattgtgatggtg 521 ||||||||| |||||||||| |||| | | |||||||||||||||| Sbjct: 27232 cagatttctttaactggaacaaggtgatgatacggtattgtgatggtg 27279
>gb|AC099701.4| Mus musculus chromosome 7, clone RP23-184F6, complete sequence Length = 226167 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 cttctccctctccctcttcc 20 |||||||||||||||||||| Sbjct: 105932 cttctccctctccctcttcc 105913
>emb|AL670720.7| Mouse DNA sequence from clone RP23-321M9 on chromosome 4, complete sequence Length = 200628 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 gggtggaggctggtgcaatg 365 |||||||||||||||||||| Sbjct: 81506 gggtggaggctggtgcaatg 81525
>emb|AL669975.9| Mouse DNA sequence from clone RP23-218H24 on chromosome X, complete sequence Length = 230634 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 ccacatggagaggcagctcc 434 |||||||||||||||||||| Sbjct: 111796 ccacatggagaggcagctcc 111777
>gb|AC170864.2| Mus musculus BAC clone RP24-576D1 from chromosome 7, complete sequence Length = 208952 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 cttctccctctccctcttcc 20 |||||||||||||||||||| Sbjct: 167070 cttctccctctccctcttcc 167089 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,886,287 Number of Sequences: 3902068 Number of extensions: 5886287 Number of successful extensions: 211623 Number of sequences better than 10.0: 134 Number of HSP's better than 10.0 without gapping: 134 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 210095 Number of HSP's gapped (non-prelim): 1524 length of query: 661 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 638 effective length of database: 17,143,297,704 effective search space: 10937423935152 effective search space used: 10937423935152 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
