| Clone Name | basd19f11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY103610.1| Zea mays PCO085932 mRNA sequence Length = 994 Score = 426 bits (215), Expect = e-116 Identities = 354/400 (88%), Gaps = 9/400 (2%) Strand = Plus / Plus Query: 21 gcggccatggaggacgaggagcacgaggtgtacggccaggagatccccgtcgacgccgag 80 ||||||||||| ||||||||||||||||||||||| ||||||||||| || |||| |||| Sbjct: 116 gcggccatggatgacgaggagcacgaggtgtacggacaggagatccctgttgacggcgag 175 Query: 81 gacgtcgagatgggcgccgggggcgacgacgccgccaagctgcacgagctcgacgagatg 140 |||||||| ||| |||||| ||||||||| ||||||| || |||||||| |||||| Sbjct: 176 gacgtcgacatgtccgccgg---cgacgacgcgaccaagcttcaggagctcgatgagatg 232 Query: 141 aagcgccgtctcaaggagatggaggaggaggccgccgccctccgcgagatgcaggccaag 200 |||||||| |||||||||||||||||||| |||||||| ||||||||||||||||| ||| Sbjct: 233 aagcgccggctcaaggagatggaggaggaagccgccgcgctccgcgagatgcaggctaag 292 Query: 201 gtcgccaaggagatgcaaggcggagatcctaatgcgaccacatctgaagcaaaagaagag 260 ||||||||||| ||||||| |||| ||||| |||||||||||| ||||| ||| Sbjct: 293 gtcgccaaggatatgcaag------atcccaatgcaaccacatctgaaaacaaagaggag 346 Query: 261 atggattctcgttctgtttttgttggaaatgttgactatgcatgcactccagaagaagtg 320 ||||||||||| || || || ||||||||||||||||||||||||||||||||||||||| Sbjct: 347 atggattctcggtcggtattcgttggaaatgttgactatgcatgcactccagaagaagtg 406 Query: 321 cagcagcattttaattcttgcggaaccgtcaaccgagtgactatcctgactgacaagttt 380 ||||||||||| |||||||| ||||| || ||| ||||||| |||||||||||||||||| Sbjct: 407 cagcagcatttcaattcttgtggaactgttaacagagtgacaatcctgactgacaagttt 466 Query: 381 gggcagcctaaaggttttgcttatgttgaatttgttgaag 420 ||||| || ||||||||||||||||| ||||||||||||| Sbjct: 467 gggcaaccaaaaggttttgcttatgtggaatttgttgaag 506
>dbj|AK099019.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118A14, full insert sequence Length = 938 Score = 406 bits (205), Expect = e-110 Identities = 358/409 (87%) Strand = Plus / Plus Query: 20 ggcggccatggaggacgaggagcacgaggtgtacggccaggagatccccgtcgacgccga 79 ||||||||||| |||||||||||||||||||||||| |||||||||||| |||||| || Sbjct: 94 ggcggccatggcggacgaggagcacgaggtgtacggacaggagatccccctcgacgggga 153 Query: 80 ggacgtcgagatgggcgccgggggcgacgacgccgccaagctgcacgagctcgacgagat 139 ||||||||| ||||||||| |||||||| ||||||||| |||| |||||||||||||| Sbjct: 154 ggacgtcgacatgggcgcccccggcgacgaggccgccaagatgcaggagctcgacgagat 213 Query: 140 gaagcgccgtctcaaggagatggaggaggaggccgccgccctccgcgagatgcaggccaa 199 |||||| | |||||||||||||||||||||||| ||| ||||||||||||||| |||| Sbjct: 214 gaagcggaggctcaaggagatggaggaggaggccaacgcgctccgcgagatgcagaccaa 273 Query: 200 ggtcgccaaggagatgcaaggcggagatcctaatgcgaccacatctgaagcaaaagaaga 259 ||||||||||||||||||||| |||||||||||| || |||||||| ||||||| || Sbjct: 274 ggtcgccaaggagatgcaaggtctggatcctaatgcgtcctcatctgaatcaaaagagga 333 Query: 260 gatggattctcgttctgtttttgttggaaatgttgactatgcatgcactccagaagaagt 319 ||||| |||| || || | ||||||||| ||||||||||||||||| ||||| ||||| Sbjct: 334 aatggacgctcggtcggtatatgttggaaacgttgactatgcatgcaccccagaggaagt 393 Query: 320 gcagcagcattttaattcttgcggaaccgtcaaccgagtgactatcctgactgacaagtt 379 ||||||||||||||||| || ||||| |||||| | ||||| |||||||| |||||||| Sbjct: 394 ccagcagcattttaattcctgtggaacggtcaacagggtgacaatcctgacagacaagtt 453 Query: 380 tgggcagcctaaaggttttgcttatgttgaatttgttgaagcagaagct 428 |||||| || |||||||| |||||||||||||| |||||| ||||||| Sbjct: 454 tgggcaaccaaaaggtttcgcttatgttgaattccttgaagtagaagct 502
>dbj|AK060429.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-A07, full insert sequence Length = 944 Score = 406 bits (205), Expect = e-110 Identities = 358/409 (87%) Strand = Plus / Plus Query: 20 ggcggccatggaggacgaggagcacgaggtgtacggccaggagatccccgtcgacgccga 79 ||||||||||| |||||||||||||||||||||||| |||||||||||| |||||| || Sbjct: 98 ggcggccatggcggacgaggagcacgaggtgtacggacaggagatccccctcgacgggga 157 Query: 80 ggacgtcgagatgggcgccgggggcgacgacgccgccaagctgcacgagctcgacgagat 139 ||||||||| ||||||||| |||||||| ||||||||| |||| |||||||||||||| Sbjct: 158 ggacgtcgacatgggcgcccccggcgacgaggccgccaagatgcaggagctcgacgagat 217 Query: 140 gaagcgccgtctcaaggagatggaggaggaggccgccgccctccgcgagatgcaggccaa 199 |||||| | |||||||||||||||||||||||| ||| ||||||||||||||| |||| Sbjct: 218 gaagcggaggctcaaggagatggaggaggaggccaacgcgctccgcgagatgcagaccaa 277 Query: 200 ggtcgccaaggagatgcaaggcggagatcctaatgcgaccacatctgaagcaaaagaaga 259 ||||||||||||||||||||| |||||||||||| || |||||||| ||||||| || Sbjct: 278 ggtcgccaaggagatgcaaggtctggatcctaatgcgtcctcatctgaatcaaaagagga 337 Query: 260 gatggattctcgttctgtttttgttggaaatgttgactatgcatgcactccagaagaagt 319 ||||| |||| || || | ||||||||| ||||||||||||||||| ||||| ||||| Sbjct: 338 aatggacgctcggtcggtatatgttggaaacgttgactatgcatgcaccccagaggaagt 397 Query: 320 gcagcagcattttaattcttgcggaaccgtcaaccgagtgactatcctgactgacaagtt 379 ||||||||||||||||| || ||||| |||||| | ||||| |||||||| |||||||| Sbjct: 398 ccagcagcattttaattcctgtggaacggtcaacagggtgacaatcctgacagacaagtt 457 Query: 380 tgggcagcctaaaggttttgcttatgttgaatttgttgaagcagaagct 428 |||||| || |||||||| |||||||||||||| |||||| ||||||| Sbjct: 458 tgggcaaccaaaaggtttcgcttatgttgaattccttgaagtagaagct 506
>ref|XM_467888.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1075 Score = 281 bits (142), Expect = 9e-73 Identities = 286/334 (85%) Strand = Plus / Plus Query: 80 ggacgtcgagatgggcgccgggggcgacgacgccgccaagctgcacgagctcgacgagat 139 ||||||||| |||| | |||| || ||||||||||| |||||||| ||||||||| |||| Sbjct: 145 ggacgtcgacatggcctccggcggggacgacgccgcgaagctgcaggagctcgaccagat 204 Query: 140 gaagcgccgtctcaaggagatggaggaggaggccgccgccctccgcgagatgcaggccaa 199 |||||| | || |||||||||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 205 gaagcgaaggctgaaggagatggaggaagaggccgcggccctccgcgacatgcaggccaa 264 Query: 200 ggtcgccaaggagatgcaaggcggagatcctaatgcgaccacatctgaagcaaaagaaga 259 ||||||||||||||||||||| |||||||||| ||| | ||| |||| ||||| || | Sbjct: 265 ggtcgccaaggagatgcaaggaggagatcctagcgcgtctacagctgaggcaaaggagca 324 Query: 260 gatggattctcgttctgtttttgttggaaatgttgactatgcatgcactccagaagaagt 319 | ||||| |||| ||||| | ||||||||||||||| |||||||| || ||||||||||| Sbjct: 325 ggtggatgctcgatctgtgtatgttggaaatgttgattatgcatgtaccccagaagaagt 384 Query: 320 gcagcagcattttaattcttgcggaaccgtcaaccgagtgactatcctgactgacaagtt 379 ||||||||||||| | | || || || ||||| ||||||| ||| | ||||||||||| Sbjct: 385 gcagcagcattttcaagcgtgtggcacagtcaatagagtgacgatcttaactgacaagtt 444 Query: 380 tgggcagcctaaaggttttgcttatgttgaattt 413 ||| ||||| ||||||||||||||||| |||||| Sbjct: 445 tggacagccaaaaggttttgcttatgtggaattt 478 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 24 gccatggaggacgaggagcacgaggtgtacggccaggagatccc 67 |||||||| || |||||||||||||||||||| || |||||||| Sbjct: 77 gccatggacgaggaggagcacgaggtgtacgggcaagagatccc 120
>dbj|AK061269.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D06, full insert sequence Length = 1075 Score = 281 bits (142), Expect = 9e-73 Identities = 286/334 (85%) Strand = Plus / Plus Query: 80 ggacgtcgagatgggcgccgggggcgacgacgccgccaagctgcacgagctcgacgagat 139 ||||||||| |||| | |||| || ||||||||||| |||||||| ||||||||| |||| Sbjct: 145 ggacgtcgacatggcctccggcggggacgacgccgcgaagctgcaggagctcgaccagat 204 Query: 140 gaagcgccgtctcaaggagatggaggaggaggccgccgccctccgcgagatgcaggccaa 199 |||||| | || |||||||||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 205 gaagcgaaggctgaaggagatggaggaagaggccgcggccctccgcgacatgcaggccaa 264 Query: 200 ggtcgccaaggagatgcaaggcggagatcctaatgcgaccacatctgaagcaaaagaaga 259 ||||||||||||||||||||| |||||||||| ||| | ||| |||| ||||| || | Sbjct: 265 ggtcgccaaggagatgcaaggaggagatcctagcgcgtctacagctgaggcaaaggagca 324 Query: 260 gatggattctcgttctgtttttgttggaaatgttgactatgcatgcactccagaagaagt 319 | ||||| |||| ||||| | ||||||||||||||| |||||||| || ||||||||||| Sbjct: 325 ggtggatgctcgatctgtgtatgttggaaatgttgattatgcatgtaccccagaagaagt 384 Query: 320 gcagcagcattttaattcttgcggaaccgtcaaccgagtgactatcctgactgacaagtt 379 ||||||||||||| | | || || || ||||| ||||||| ||| | ||||||||||| Sbjct: 385 gcagcagcattttcaagcgtgtggcacagtcaatagagtgacgatcttaactgacaagtt 444 Query: 380 tgggcagcctaaaggttttgcttatgttgaattt 413 ||| ||||| ||||||||||||||||| |||||| Sbjct: 445 tggacagccaaaaggttttgcttatgtggaattt 478 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 24 gccatggaggacgaggagcacgaggtgtacggccaggagatccc 67 |||||||| || |||||||||||||||||||| || |||||||| Sbjct: 77 gccatggacgaggaggagcacgaggtgtacgggcaagagatccc 120
>gb|AY109465.1| Zea mays CL6587_1 mRNA sequence Length = 1192 Score = 256 bits (129), Expect = 5e-65 Identities = 261/306 (85%) Strand = Plus / Plus Query: 108 gacgccgccaagctgcacgagctcgacgagatgaagcgccgtctcaaggagatggaggag 167 ||||| || |||||||| ||||||||||||||||||||| | || ||||||||||||||| Sbjct: 155 gacgcggcgaagctgcaggagctcgacgagatgaagcgcaggctgaaggagatggaggag 214 Query: 168 gaggccgccgccctccgcgagatgcaggccaaggtcgccaaggagatgcaaggcggagat 227 || |||||||||||||| |||||||||||||||||||||||||||||||| || || Sbjct: 215 gaannngccgccctccgcgatatgcaggccaaggtcgccaaggagatgcaaggaggtgac 274 Query: 228 cctaatgcgaccacatctgaagcaaaagaagagatggattctcgttctgtttttgttgga 287 |||| | | | ||| |||| || || || || ||||| | |||||||| | ||||||| Sbjct: 275 cctagtacatctacagctgaggcgaaggagcaggtggatgcccgttctgtgtatgttgga 334 Query: 288 aatgttgactatgcatgcactccagaagaagtgcagcagcattttaattcttgcggaacc 347 |||||||| ||||| ||||| |||||||||||||| |||||||| | |||| ||||| Sbjct: 335 aatgttgattatgcttgcaccccagaagaagtgcaacagcatttccaagcttgtggaact 394 Query: 348 gtcaaccgagtgactatcctgactgacaagtttgggcagcctaaaggttttgcttatgtt 407 |||||| | ||||| ||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 395 gtcaacagggtgacaatcttgactgacaagtttgggcagccaaaaggttttgcttatgtt 454 Query: 408 gaattt 413 |||||| Sbjct: 455 gaattt 460 Score = 58.0 bits (29), Expect = 2e-05 Identities = 48/53 (90%), Gaps = 1/53 (1%) Strand = Plus / Plus Query: 15 cacgcggcggccatggaggacgaggagcacgaggtgtacggccaggagatccc 67 ||||||||| ||||||| || |||||||||||||| ||||||||||| ||||| Sbjct: 51 cacgcggcg-ccatggacgaggaggagcacgaggtttacggccaggaaatccc 102
>ref|XM_467889.1| Oryza sativa (japonica cultivar-group), mRNA Length = 963 Score = 161 bits (81), Expect = 2e-36 Identities = 126/141 (89%) Strand = Plus / Plus Query: 80 ggacgtcgagatgggcgccgggggcgacgacgccgccaagctgcacgagctcgacgagat 139 ||||||||| |||| | |||| || ||||||||||| |||||||| ||||||||| |||| Sbjct: 111 ggacgtcgacatggcctccggcggggacgacgccgcgaagctgcaggagctcgaccagat 170 Query: 140 gaagcgccgtctcaaggagatggaggaggaggccgccgccctccgcgagatgcaggccaa 199 |||||| | || |||||||||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 171 gaagcgaaggctgaaggagatggaggaagaggccgcggccctccgcgacatgcaggccaa 230 Query: 200 ggtcgccaaggagatgcaagg 220 ||||||||||||||||||||| Sbjct: 231 ggtcgccaaggagatgcaagg 251 Score = 127 bits (64), Expect = 3e-26 Identities = 130/152 (85%) Strand = Plus / Plus Query: 262 tggattctcgttctgtttttgttggaaatgttgactatgcatgcactccagaagaagtgc 321 ||||| |||| ||||| | ||||||||||||||| |||||||| || ||||||||||||| Sbjct: 305 tggatgctcgatctgtgtatgttggaaatgttgattatgcatgtaccccagaagaagtgc 364 Query: 322 agcagcattttaattcttgcggaaccgtcaaccgagtgactatcctgactgacaagtttg 381 ||||||||||| | | || || || ||||| ||||||| ||| | ||||||||||||| Sbjct: 365 agcagcattttcaagcgtgtggcacagtcaatagagtgacgatcttaactgacaagtttg 424 Query: 382 ggcagcctaaaggttttgcttatgttgaattt 413 | ||||| ||||||||||||||||| |||||| Sbjct: 425 gacagccaaaaggttttgcttatgtggaattt 456 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 24 gccatggaggacgaggagcacgaggtgtacggccaggagatccc 67 |||||||| || |||||||||||||||||||| || |||||||| Sbjct: 43 gccatggacgaggaggagcacgaggtgtacgggcaagagatccc 86
>dbj|AK071146.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081D16, full insert sequence Length = 963 Score = 161 bits (81), Expect = 2e-36 Identities = 126/141 (89%) Strand = Plus / Plus Query: 80 ggacgtcgagatgggcgccgggggcgacgacgccgccaagctgcacgagctcgacgagat 139 ||||||||| |||| | |||| || ||||||||||| |||||||| ||||||||| |||| Sbjct: 111 ggacgtcgacatggcctccggcggggacgacgccgcgaagctgcaggagctcgaccagat 170 Query: 140 gaagcgccgtctcaaggagatggaggaggaggccgccgccctccgcgagatgcaggccaa 199 |||||| | || |||||||||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 171 gaagcgaaggctgaaggagatggaggaagaggccgcggccctccgcgacatgcaggccaa 230 Query: 200 ggtcgccaaggagatgcaagg 220 ||||||||||||||||||||| Sbjct: 231 ggtcgccaaggagatgcaagg 251 Score = 127 bits (64), Expect = 3e-26 Identities = 130/152 (85%) Strand = Plus / Plus Query: 262 tggattctcgttctgtttttgttggaaatgttgactatgcatgcactccagaagaagtgc 321 ||||| |||| ||||| | ||||||||||||||| |||||||| || ||||||||||||| Sbjct: 305 tggatgctcgatctgtgtatgttggaaatgttgattatgcatgtaccccagaagaagtgc 364 Query: 322 agcagcattttaattcttgcggaaccgtcaaccgagtgactatcctgactgacaagtttg 381 ||||||||||| | | || || || ||||| ||||||| ||| | ||||||||||||| Sbjct: 365 agcagcattttcaagcgtgtggcacagtcaatagagtgacgatcttaactgacaagtttg 424 Query: 382 ggcagcctaaaggttttgcttatgttgaattt 413 | ||||| ||||||||||||||||| |||||| Sbjct: 425 gacagccaaaaggttttgcttatgtggaattt 456 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 24 gccatggaggacgaggagcacgaggtgtacggccaggagatccc 67 |||||||| || |||||||||||||||||||| || |||||||| Sbjct: 43 gccatggacgaggaggagcacgaggtgtacgggcaagagatccc 86
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 147 bits (74), Expect = 3e-32 Identities = 122/138 (88%) Strand = Plus / Plus Query: 291 gttgactatgcatgcactccagaagaagtgcagcagcattttaattcttgcggaaccgtc 350 ||||||||||||||||| ||||| ||||| ||||||||||||||||| || ||||| ||| Sbjct: 6169873 gttgactatgcatgcaccccagaggaagtccagcagcattttaattcctgtggaacggtc 6169932 Query: 351 aaccgagtgactatcctgactgacaagtttgggcagcctaaaggttttgcttatgttgaa 410 ||| | ||||| |||||||| |||||||||||||| || |||||||| |||||||||||| Sbjct: 6169933 aacagggtgacaatcctgacagacaagtttgggcaaccaaaaggtttcgcttatgttgaa 6169992 Query: 411 tttgttgaagcagaagct 428 || |||||| ||||||| Sbjct: 6169993 ttccttgaagtagaagct 6170010 Score = 135 bits (68), Expect = 1e-28 Identities = 92/100 (92%) Strand = Plus / Plus Query: 121 tgcacgagctcgacgagatgaagcgccgtctcaaggagatggaggaggaggccgccgccc 180 |||| |||||||||||||||||||| | |||||||||||||||||||||||| ||| | Sbjct: 6167075 tgcaggagctcgacgagatgaagcggaggctcaaggagatggaggaggaggccaacgcgc 6167134 Query: 181 tccgcgagatgcaggccaaggtcgccaaggagatgcaagg 220 |||||||||||||| ||||||||||||||||||||||||| Sbjct: 6167135 tccgcgagatgcagaccaaggtcgccaaggagatgcaagg 6167174 Score = 119 bits (60), Expect = 8e-24 Identities = 90/100 (90%) Strand = Plus / Plus Query: 20 ggcggccatggaggacgaggagcacgaggtgtacggccaggagatccccgtcgacgccga 79 ||||||||||| |||||||||||||||||||||||| |||||||||||| |||||| || Sbjct: 6166854 ggcggccatggcggacgaggagcacgaggtgtacggacaggagatccccctcgacgggga 6166913 Query: 80 ggacgtcgagatgggcgccgggggcgacgacgccgccaag 119 ||||||||| ||||||||| |||||||| ||||||||| Sbjct: 6166914 ggacgtcgacatgggcgcccccggcgacgaggccgccaag 6166953 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 225 gatcctaatgcgaccacatctgaagcaaaagaagagatgga 265 |||||||||||| || |||||||| ||||||| || ||||| Sbjct: 6168574 gatcctaatgcgtcctcatctgaatcaaaagaggaaatgga 6168614 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 ggaggaggaggccgccgccc 180 |||||||||||||||||||| Sbjct: 19144641 ggaggaggaggccgccgccc 19144622
>dbj|AP003488.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0436F11 Length = 165550 Score = 147 bits (74), Expect = 3e-32 Identities = 122/138 (88%) Strand = Plus / Plus Query: 291 gttgactatgcatgcactccagaagaagtgcagcagcattttaattcttgcggaaccgtc 350 ||||||||||||||||| ||||| ||||| ||||||||||||||||| || ||||| ||| Sbjct: 83692 gttgactatgcatgcaccccagaggaagtccagcagcattttaattcctgtggaacggtc 83751 Query: 351 aaccgagtgactatcctgactgacaagtttgggcagcctaaaggttttgcttatgttgaa 410 ||| | ||||| |||||||| |||||||||||||| || |||||||| |||||||||||| Sbjct: 83752 aacagggtgacaatcctgacagacaagtttgggcaaccaaaaggtttcgcttatgttgaa 83811 Query: 411 tttgttgaagcagaagct 428 || |||||| ||||||| Sbjct: 83812 ttccttgaagtagaagct 83829 Score = 135 bits (68), Expect = 1e-28 Identities = 92/100 (92%) Strand = Plus / Plus Query: 121 tgcacgagctcgacgagatgaagcgccgtctcaaggagatggaggaggaggccgccgccc 180 |||| |||||||||||||||||||| | |||||||||||||||||||||||| ||| | Sbjct: 80894 tgcaggagctcgacgagatgaagcggaggctcaaggagatggaggaggaggccaacgcgc 80953 Query: 181 tccgcgagatgcaggccaaggtcgccaaggagatgcaagg 220 |||||||||||||| ||||||||||||||||||||||||| Sbjct: 80954 tccgcgagatgcagaccaaggtcgccaaggagatgcaagg 80993 Score = 119 bits (60), Expect = 8e-24 Identities = 90/100 (90%) Strand = Plus / Plus Query: 20 ggcggccatggaggacgaggagcacgaggtgtacggccaggagatccccgtcgacgccga 79 ||||||||||| |||||||||||||||||||||||| |||||||||||| |||||| || Sbjct: 80673 ggcggccatggcggacgaggagcacgaggtgtacggacaggagatccccctcgacgggga 80732 Query: 80 ggacgtcgagatgggcgccgggggcgacgacgccgccaag 119 ||||||||| ||||||||| |||||||| ||||||||| Sbjct: 80733 ggacgtcgacatgggcgcccccggcgacgaggccgccaag 80772 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 225 gatcctaatgcgaccacatctgaagcaaaagaagagatgga 265 |||||||||||| || |||||||| ||||||| || ||||| Sbjct: 82393 gatcctaatgcgtcctcatctgaatcaaaagaggaaatgga 82433
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 133 bits (67), Expect = 5e-28 Identities = 94/103 (91%) Strand = Plus / Minus Query: 118 agctgcacgagctcgacgagatgaagcgccgtctcaaggagatggaggaggaggccgccg 177 ||||||| ||||||||| |||||||||| | || |||||||||||||| |||||||| | Sbjct: 31938821 agctgcaggagctcgaccagatgaagcgaaggctgaaggagatggaggaagaggccgcgg 31938762 Query: 178 ccctccgcgagatgcaggccaaggtcgccaaggagatgcaagg 220 |||||||||| |||||||||||||||||||||||||||||||| Sbjct: 31938761 ccctccgcgacatgcaggccaaggtcgccaaggagatgcaagg 31938719 Score = 101 bits (51), Expect = 2e-18 Identities = 105/123 (85%) Strand = Plus / Minus Query: 291 gttgactatgcatgcactccagaagaagtgcagcagcattttaattcttgcggaaccgtc 350 ||||| |||||||| || |||||||||||||||||||||||| | | || || || ||| Sbjct: 31935519 gttgattatgcatgtaccccagaagaagtgcagcagcattttcaagcgtgtggcacagtc 31935460 Query: 351 aaccgagtgactatcctgactgacaagtttgggcagcctaaaggttttgcttatgttgaa 410 || ||||||| ||| | |||||||||||||| ||||| ||||||||||||||||| ||| Sbjct: 31935459 aatagagtgacgatcttaactgacaagtttggacagccaaaaggttttgcttatgtggaa 31935400 Query: 411 ttt 413 ||| Sbjct: 31935399 ttt 31935397 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 24 gccatggaggacgaggagcacgaggtgtacggccaggagatccc 67 |||||||| || |||||||||||||||||||| || |||||||| Sbjct: 31939018 gccatggacgaggaggagcacgaggtgtacgggcaagagatccc 31938975
>dbj|AP004814.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0471A11 Length = 157740 Score = 133 bits (67), Expect = 5e-28 Identities = 94/103 (91%) Strand = Plus / Minus Query: 118 agctgcacgagctcgacgagatgaagcgccgtctcaaggagatggaggaggaggccgccg 177 ||||||| ||||||||| |||||||||| | || |||||||||||||| |||||||| | Sbjct: 99822 agctgcaggagctcgaccagatgaagcgaaggctgaaggagatggaggaagaggccgcgg 99763 Query: 178 ccctccgcgagatgcaggccaaggtcgccaaggagatgcaagg 220 |||||||||| |||||||||||||||||||||||||||||||| Sbjct: 99762 ccctccgcgacatgcaggccaaggtcgccaaggagatgcaagg 99720 Score = 101 bits (51), Expect = 2e-18 Identities = 105/123 (85%) Strand = Plus / Minus Query: 291 gttgactatgcatgcactccagaagaagtgcagcagcattttaattcttgcggaaccgtc 350 ||||| |||||||| || |||||||||||||||||||||||| | | || || || ||| Sbjct: 96520 gttgattatgcatgtaccccagaagaagtgcagcagcattttcaagcgtgtggcacagtc 96461 Query: 351 aaccgagtgactatcctgactgacaagtttgggcagcctaaaggttttgcttatgttgaa 410 || ||||||| ||| | |||||||||||||| ||||| ||||||||||||||||| ||| Sbjct: 96460 aatagagtgacgatcttaactgacaagtttggacagccaaaaggttttgcttatgtggaa 96401 Query: 411 ttt 413 ||| Sbjct: 96400 ttt 96398 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 24 gccatggaggacgaggagcacgaggtgtacggccaggagatccc 67 |||||||| || |||||||||||||||||||| || |||||||| Sbjct: 100019 gccatggacgaggaggagcacgaggtgtacgggcaagagatccc 99976
>ref|NM_124491.2| Arabidopsis thaliana RNA binding / nucleic acid binding AT5G51120 mRNA, complete cds Length = 1053 Score = 87.7 bits (44), Expect = 3e-14 Identities = 122/148 (82%) Strand = Plus / Plus Query: 281 tgttggaaatgttgactatgcatgcactccagaagaagtgcagcagcattttaattcttg 340 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||| | || || Sbjct: 398 tgttggcaatgtggactatgcatgtactccagaggaagtccagcagcattttcaatcatg 457 Query: 341 cggaaccgtcaaccgagtgactatcctgactgacaagtttgggcagcctaaaggttttgc 400 || || || || | || || || ||||| || |||||||| || |||||||||||||| Sbjct: 458 tgggacagtgaatagggttacaattctgacagataagtttggtcaacctaaaggttttgc 517 Query: 401 ttatgttgaatttgttgaagcagaagct 428 ||||| |||||||| |||| ||||||| Sbjct: 518 gtatgtcgaatttgtggaagtagaagct 545
>gb|AY116673.1| Arabidopsis thaliana unknown protein (At5g51120) mRNA, complete cds Length = 941 Score = 87.7 bits (44), Expect = 3e-14 Identities = 122/148 (82%) Strand = Plus / Plus Query: 281 tgttggaaatgttgactatgcatgcactccagaagaagtgcagcagcattttaattcttg 340 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||| | || || Sbjct: 361 tgttggcaatgtggactatgcatgtactccagaggaagtccagcagcattttcaatcatg 420 Query: 341 cggaaccgtcaaccgagtgactatcctgactgacaagtttgggcagcctaaaggttttgc 400 || || || || | || || || ||||| || |||||||| || |||||||||||||| Sbjct: 421 tgggacagtgaatagggttacaattctgacagataagtttggtcaacctaaaggttttgc 480 Query: 401 ttatgttgaatttgttgaagcagaagct 428 ||||| |||||||| |||| ||||||| Sbjct: 481 gtatgtcgaatttgtggaagtagaagct 508
>gb|AY079392.1| Arabidopsis thaliana unknown protein (At5g51120) mRNA, complete cds Length = 715 Score = 87.7 bits (44), Expect = 3e-14 Identities = 122/148 (82%) Strand = Plus / Plus Query: 281 tgttggaaatgttgactatgcatgcactccagaagaagtgcagcagcattttaattcttg 340 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||| | || || Sbjct: 318 tgttggcaatgtggactatgcatgtactccagaggaagtccagcagcattttcaatcatg 377 Query: 341 cggaaccgtcaaccgagtgactatcctgactgacaagtttgggcagcctaaaggttttgc 400 || || || || | || || || ||||| || |||||||| || |||||||||||||| Sbjct: 378 tgggacagtgaatagggttacaattctgacagataagtttggtcaacctaaaggttttgc 437 Query: 401 ttatgttgaatttgttgaagcagaagct 428 ||||| |||||||| |||| ||||||| Sbjct: 438 gtatgtcgaatttgtggaagtagaagct 465
>gb|AY057580.1| Arabidopsis thaliana unknown protein (At5g51120) mRNA, complete cds Length = 992 Score = 87.7 bits (44), Expect = 3e-14 Identities = 122/148 (82%) Strand = Plus / Plus Query: 281 tgttggaaatgttgactatgcatgcactccagaagaagtgcagcagcattttaattcttg 340 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||| | || || Sbjct: 364 tgttggcaatgtggactatgcatgtactccagaggaagtccagcagcattttcaatcatg 423 Query: 341 cggaaccgtcaaccgagtgactatcctgactgacaagtttgggcagcctaaaggttttgc 400 || || || || | || || || ||||| || |||||||| || |||||||||||||| Sbjct: 424 tgggacagtgaatagggttacaattctgacagataagtttggtcaacctaaaggttttgc 483 Query: 401 ttatgttgaatttgttgaagcagaagct 428 ||||| |||||||| |||| ||||||| Sbjct: 484 gtatgtcgaatttgtggaagtagaagct 511
>gb|AY054186.1| Arabidopsis thaliana AT5g51120/MWD22_6 mRNA, complete cds Length = 994 Score = 87.7 bits (44), Expect = 3e-14 Identities = 122/148 (82%) Strand = Plus / Plus Query: 281 tgttggaaatgttgactatgcatgcactccagaagaagtgcagcagcattttaattcttg 340 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||| | || || Sbjct: 377 tgttggcaatgtggactatgcatgtactccagaggaagtccagcagcattttcaatcatg 436 Query: 341 cggaaccgtcaaccgagtgactatcctgactgacaagtttgggcagcctaaaggttttgc 400 || || || || | || || || ||||| || |||||||| || |||||||||||||| Sbjct: 437 tgggacagtgaatagggttacaattctgacagataagtttggtcaacctaaaggttttgc 496 Query: 401 ttatgttgaatttgttgaagcagaagct 428 ||||| |||||||| |||| ||||||| Sbjct: 497 gtatgtcgaatttgtggaagtagaagct 524
>gb|AY084464.1| Arabidopsis thaliana clone 10876 mRNA, complete sequence Length = 1078 Score = 87.7 bits (44), Expect = 3e-14 Identities = 122/148 (82%) Strand = Plus / Plus Query: 281 tgttggaaatgttgactatgcatgcactccagaagaagtgcagcagcattttaattcttg 340 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||| | || || Sbjct: 398 tgttggcaatgtggactatgcatgtactccagaggaagtccagcagcattttcaatcatg 457 Query: 341 cggaaccgtcaaccgagtgactatcctgactgacaagtttgggcagcctaaaggttttgc 400 || || || || | || || || ||||| || |||||||| || |||||||||||||| Sbjct: 458 tgggacagtgaatagggttacaattctgacagataagtttggtcaacctaaaggttttgc 517 Query: 401 ttatgttgaatttgttgaagcagaagct 428 ||||| |||||||| |||| ||||||| Sbjct: 518 gtatgtcgaatttgtggaagtagaagct 545
>dbj|AB023044.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MWD22 Length = 87180 Score = 77.8 bits (39), Expect = 3e-11 Identities = 111/135 (82%) Strand = Plus / Plus Query: 294 gactatgcatgcactccagaagaagtgcagcagcattttaattcttgcggaaccgtcaac 353 ||||||||||| |||||||| ||||| |||||||||||| | || || || || || || Sbjct: 14465 gactatgcatgtactccagaggaagtccagcagcattttcaatcatgtgggacagtgaat 14524 Query: 354 cgagtgactatcctgactgacaagtttgggcagcctaaaggttttgcttatgttgaattt 413 | || || || ||||| || |||||||| || |||||||||||||| ||||| |||||| Sbjct: 14525 agggttacaattctgacagataagtttggtcaacctaaaggttttgcgtatgtcgaattt 14584 Query: 414 gttgaagcagaagct 428 || |||| ||||||| Sbjct: 14585 gtggaagtagaagct 14599
>gb|BT014077.1| Lycopersicon esculentum clone 133177F, mRNA sequence Length = 1196 Score = 73.8 bits (37), Expect = 4e-10 Identities = 109/133 (81%) Strand = Plus / Plus Query: 288 aatgttgactatgcatgcactccagaagaagtgcagcagcattttaattcttgcggaacc 347 ||||| || ||||| ||||| || |||||||| ||||||||||| | || || || || Sbjct: 460 aatgtagattatgcctgcacacctgaagaagttcagcagcatttccagtcctgtggcact 519 Query: 348 gtcaaccgagtgactatcctgactgacaagtttgggcagcctaaaggttttgcttatgtt 407 || ||| | || ||||||||||| ||||||||||| ||||| ||||||| ||| ||||| Sbjct: 520 gttaacagggtaactatcctgacagacaagtttggccagcccaaaggttatgcctatgtc 579 Query: 408 gaatttgttgaag 420 ||||| ||||||| Sbjct: 580 gaattcgttgaag 592
>gb|AC121245.17| Medicago truncatula clone mth2-33g3, complete sequence Length = 125763 Score = 69.9 bits (35), Expect = 6e-09 Identities = 110/135 (81%) Strand = Plus / Plus Query: 294 gactatgcatgcactccagaagaagtgcagcagcattttaattcttgcggaaccgtcaac 353 ||||||||||| ||||| ||||| |||||||||||||| | || || || || || ||| Sbjct: 91902 gactatgcatgtactcctgaagacgtgcagcagcatttccaatcgtgtggtactgtaaac 91961 Query: 354 cgagtgactatcctgactgacaagtttgggcagcctaaaggttttgcttatgttgaattt 413 || || ||||| | ||||| |||||||| || || || |||| ||||||||| |||||| Sbjct: 91962 cgtgttactattcgcactgataagtttggccaacccaagggttatgcttatgtagaattt 92021 Query: 414 gttgaagcagaagct 428 || |||| ||||||| Sbjct: 92022 gtcgaagtagaagct 92036
>ref|NM_125924.2| Arabidopsis thaliana RNA binding / nucleic acid binding AT5G65260 mRNA, complete cds Length = 966 Score = 58.0 bits (29), Expect = 2e-05 Identities = 110/137 (80%) Strand = Plus / Plus Query: 276 gtttttgttggaaatgttgactatgcatgcactccagaagaagtgcagcagcattttaat 335 ||||||||||| |||||||| || || ||||| || |||||||| ||||||||||| | Sbjct: 313 gtttttgttggcaatgttgattacgcttgcacacctgaagaagttcagcagcatttccaa 372 Query: 336 tcttgcggaaccgtcaaccgagtgactatcctgactgacaagtttgggcagcctaaaggt 395 | ||||| || ||| | || ||||| || ||||| ||||| || |||||||| || || Sbjct: 373 acatgcggcactgtccatcgggtgaccattctgacagacaaattcgggcagccaaaggga 432 Query: 396 tttgcttatgttgaatt 412 ||||| ||||| ||||| Sbjct: 433 tttgcatatgtagaatt 449 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 27 atggaggacgaggagcacgaggtgtacgg 55 |||||||| |||||||||||||| ||||| Sbjct: 34 atggaggaagaggagcacgaggtttacgg 62
>gb|BT000018.1| Arabidopsis thaliana poly(A)-binding protein II-like (At5g65260) mRNA, complete cds Length = 744 Score = 58.0 bits (29), Expect = 2e-05 Identities = 110/137 (80%) Strand = Plus / Plus Query: 276 gtttttgttggaaatgttgactatgcatgcactccagaagaagtgcagcagcattttaat 335 ||||||||||| |||||||| || || ||||| || |||||||| ||||||||||| | Sbjct: 280 gtttttgttggcaatgttgattacgcttgcacacctgaagaagttcagcagcatttccaa 339 Query: 336 tcttgcggaaccgtcaaccgagtgactatcctgactgacaagtttgggcagcctaaaggt 395 | ||||| || ||| | || ||||| || ||||| ||||| || |||||||| || || Sbjct: 340 acatgcggcactgtccatcgggtgaccattctgacagacaaattcgggcagccaaaggga 399 Query: 396 tttgcttatgttgaatt 412 ||||| ||||| ||||| Sbjct: 400 tttgcatatgtagaatt 416 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 27 atggaggacgaggagcacgaggtgtacgg 55 |||||||| |||||||||||||| ||||| Sbjct: 1 atggaggaagaggagcacgaggtttacgg 29
>gb|AF386984.1|AF386984 Arabidopsis thaliana poly(A)-binding protein II-like (MQN23.20) mRNA, complete cds Length = 929 Score = 58.0 bits (29), Expect = 2e-05 Identities = 110/137 (80%) Strand = Plus / Plus Query: 276 gtttttgttggaaatgttgactatgcatgcactccagaagaagtgcagcagcattttaat 335 ||||||||||| |||||||| || || ||||| || |||||||| ||||||||||| | Sbjct: 313 gtttttgttggcaatgttgattacgcttgcacacctgaagaagttcagcagcatttccaa 372 Query: 336 tcttgcggaaccgtcaaccgagtgactatcctgactgacaagtttgggcagcctaaaggt 395 | ||||| || ||| | || ||||| || ||||| ||||| || |||||||| || || Sbjct: 373 acatgcggcactgtccatcgggtgaccattctgacagacaaattcgggcagccaaaggga 432 Query: 396 tttgcttatgttgaatt 412 ||||| ||||| ||||| Sbjct: 433 tttgcatatgtagaatt 449 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 27 atggaggacgaggagcacgaggtgtacgg 55 |||||||| |||||||||||||| ||||| Sbjct: 34 atggaggaagaggagcacgaggtttacgg 62
>emb|BX830904.1|CNS09YS7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS38ZF12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 805 Score = 58.0 bits (29), Expect = 2e-05 Identities = 110/137 (80%) Strand = Plus / Plus Query: 276 gtttttgttggaaatgttgactatgcatgcactccagaagaagtgcagcagcattttaat 335 ||||||||||| |||||||| || || ||||| || |||||||| ||||||||||| | Sbjct: 159 gtttttgttggcaatgttgattacgcttgcacacctgaagaagttcagcagcatttccaa 218 Query: 336 tcttgcggaaccgtcaaccgagtgactatcctgactgacaagtttgggcagcctaaaggt 395 | ||||| || ||| | || ||||| || ||||| ||||| || |||||||| || || Sbjct: 219 acatgcggcactgtccatcgggtgaccattctgacagacaaattcgggcagccaaaggga 278 Query: 396 tttgcttatgttgaatt 412 ||||| ||||| ||||| Sbjct: 279 tttgcatatgtagaatt 295
>ref|NM_121073.2| Arabidopsis thaliana RNA binding / nucleic acid binding AT5G10350 transcript variant AT5G10350.1 mRNA, complete cds Length = 881 Score = 54.0 bits (27), Expect = 4e-04 Identities = 126/159 (79%) Strand = Plus / Plus Query: 262 tggattctcgttctgtttttgttggaaatgttgactatgcatgcactccagaagaagtgc 321 ||||| |||| || |||| |||||| ||||| |||||||| || || || |||||||||| Sbjct: 284 tggatgctcgatcagtttatgttggcaatgtcgactatgcctgtacacctgaagaagtgc 343 Query: 322 agcagcattttaattcttgcggaaccgtcaaccgagtgactatcctgactgacaagtttg 381 | | ||||| | | |||||||| |||||||| || || || || | |||||||||| Sbjct: 344 aactacatttccaaacatgcggaacagtcaaccgggtaaccattctaatggacaagtttg 403 Query: 382 ggcagcctaaaggttttgcttatgttgaatttgttgaag 420 | ||||| || || ||||||||||| || ||||| |||| Sbjct: 404 gacagccaaagggatttgcttatgtggagtttgtagaag 442
>ref|NM_180472.1| Arabidopsis thaliana RNA binding / nucleic acid binding AT5G10350 transcript variant AT5G10350.2 mRNA, complete cds Length = 1006 Score = 54.0 bits (27), Expect = 4e-04 Identities = 126/159 (79%) Strand = Plus / Plus Query: 262 tggattctcgttctgtttttgttggaaatgttgactatgcatgcactccagaagaagtgc 321 ||||| |||| || |||| |||||| ||||| |||||||| || || || |||||||||| Sbjct: 284 tggatgctcgatcagtttatgttggcaatgtcgactatgcctgtacacctgaagaagtgc 343 Query: 322 agcagcattttaattcttgcggaaccgtcaaccgagtgactatcctgactgacaagtttg 381 | | ||||| | | |||||||| |||||||| || || || || | |||||||||| Sbjct: 344 aactacatttccaaacatgcggaacagtcaaccgggtaaccattctaatggacaagtttg 403 Query: 382 ggcagcctaaaggttttgcttatgttgaatttgttgaag 420 | ||||| || || ||||||||||| || ||||| |||| Sbjct: 404 gacagccaaagggatttgcttatgtggagtttgtagaag 442
>gb|BT005003.1| Arabidopsis thaliana clone U20623 putative polyadenylate-binding protein II (PAB2) (At5g10350) mRNA, complete cds Length = 685 Score = 54.0 bits (27), Expect = 4e-04 Identities = 126/159 (79%) Strand = Plus / Plus Query: 262 tggattctcgttctgtttttgttggaaatgttgactatgcatgcactccagaagaagtgc 321 ||||| |||| || |||| |||||| ||||| |||||||| || || || |||||||||| Sbjct: 257 tggatgctcgatcagtttatgttggcaatgtcgactatgcctgtacacctgaagaagtgc 316 Query: 322 agcagcattttaattcttgcggaaccgtcaaccgagtgactatcctgactgacaagtttg 381 | | ||||| | | |||||||| |||||||| || || || || | |||||||||| Sbjct: 317 aactacatttccaaacatgcggaacagtcaaccgggtaaccattctaatggacaagtttg 376 Query: 382 ggcagcctaaaggttttgcttatgttgaatttgttgaag 420 | ||||| || || ||||||||||| || ||||| |||| Sbjct: 377 gacagccaaagggatttgcttatgtggagtttgtagaag 415
>gb|BT003893.1| Arabidopsis thaliana clone RAFL15-13-K12 (R20623) putative polyadenylate-binding protein II (PAB2) (At5g10350) mRNA, complete cds Length = 889 Score = 54.0 bits (27), Expect = 4e-04 Identities = 126/159 (79%) Strand = Plus / Plus Query: 262 tggattctcgttctgtttttgttggaaatgttgactatgcatgcactccagaagaagtgc 321 ||||| |||| || |||| |||||| ||||| |||||||| || || || |||||||||| Sbjct: 284 tggatgctcgatcagtttatgttggcaatgtcgactatgcctgtacacctgaagaagtgc 343 Query: 322 agcagcattttaattcttgcggaaccgtcaaccgagtgactatcctgactgacaagtttg 381 | | ||||| | | |||||||| |||||||| || || || || | |||||||||| Sbjct: 344 aactacatttccaaacatgcggaacagtcaaccgggtaaccattctaatggacaagtttg 403 Query: 382 ggcagcctaaaggttttgcttatgttgaatttgttgaag 420 | ||||| || || ||||||||||| || ||||| |||| Sbjct: 404 gacagccaaagggatttgcttatgtggagtttgtagaag 442
>gb|AY231972.1| Drosophila yakuba clone yak-em_Pabp2 mRNA sequence Length = 231 Score = 48.1 bits (24), Expect = 0.024 Identities = 24/24 (100%) Strand = Plus / Plus Query: 151 tcaaggagatggaggaggaggccg 174 |||||||||||||||||||||||| Sbjct: 152 tcaaggagatggaggaggaggccg 175
>gb|AC008194.9| Drosophila melanogaster clone BACR49A05, complete sequence Length = 181437 Score = 46.1 bits (23), Expect = 0.093 Identities = 23/23 (100%) Strand = Plus / Minus Query: 73 acgccgaggacgtcgagatgggc 95 ||||||||||||||||||||||| Sbjct: 82627 acgccgaggacgtcgagatgggc 82605
>emb|AL939105.1|SCO939105 Streptomyces coelicolor A3(2) complete genome; segment 2/29 Length = 291000 Score = 46.1 bits (23), Expect = 0.093 Identities = 23/23 (100%) Strand = Plus / Plus Query: 23 ggccatggaggacgaggagcacg 45 ||||||||||||||||||||||| Sbjct: 68756 ggccatggaggacgaggagcacg 68778
>ref|NM_133121.3| Drosophila melanogaster twiggy CG7440-RA, transcript variant A (tgy), mRNA Length = 1329 Score = 46.1 bits (23), Expect = 0.093 Identities = 23/23 (100%) Strand = Plus / Plus Query: 73 acgccgaggacgtcgagatgggc 95 ||||||||||||||||||||||| Sbjct: 779 acgccgaggacgtcgagatgggc 801
>ref|NM_001038765.1| Drosophila melanogaster twiggy CG7440-RB, transcript variant B (tgy), mRNA Length = 1625 Score = 46.1 bits (23), Expect = 0.093 Identities = 23/23 (100%) Strand = Plus / Plus Query: 73 acgccgaggacgtcgagatgggc 95 ||||||||||||||||||||||| Sbjct: 1075 acgccgaggacgtcgagatgggc 1097
>gb|AY069768.1| Drosophila melanogaster RE01689 full length cDNA Length = 1627 Score = 46.1 bits (23), Expect = 0.093 Identities = 23/23 (100%) Strand = Plus / Plus Query: 73 acgccgaggacgtcgagatgggc 95 ||||||||||||||||||||||| Sbjct: 1062 acgccgaggacgtcgagatgggc 1084
>gb|AE003511.4| Drosophila melanogaster chromosome X, section 63 of 74 of the complete sequence Length = 297969 Score = 46.1 bits (23), Expect = 0.093 Identities = 23/23 (100%) Strand = Plus / Minus Query: 73 acgccgaggacgtcgagatgggc 95 ||||||||||||||||||||||| Sbjct: 71009 acgccgaggacgtcgagatgggc 70987
>gb|BC080300.1| Mus musculus DnaJ (Hsp40) homolog, subfamily C, member 1, mRNA (cDNA clone MGC:90686 IMAGE:30536910), complete cds Length = 5087 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 23 ggccatggaggacgaggagcacgagg 48 |||||||||||| ||||||||||||| Sbjct: 1562 ggccatggaggatgaggagcacgagg 1587
>gb|BC037771.1| Mus musculus, clone IMAGE:1511612, mRNA Length = 1175 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 23 ggccatggaggacgaggagcacgagg 48 |||||||||||| ||||||||||||| Sbjct: 511 ggccatggaggatgaggagcacgagg 486
>gb|AC166741.1| Brassica rapa subsp. pekinensis clone KBrH080C09, complete sequence Length = 132099 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 27 atggaggacgaggagcacgaggtgtacggc 56 |||||||| |||||||||||||| |||||| Sbjct: 9773 atggaggaagaggagcacgaggtatacggc 9802 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 cgcgagatgcaggccaaggt 202 |||||||||||||||||||| Sbjct: 9998 cgcgagatgcaggccaaggt 10017
>emb|AL353995.1|ATF12B17 Arabidopsis thaliana DNA chromosome 5, BAC clone F12B17 (ESSA project) Length = 113053 Score = 44.1 bits (22), Expect = 0.37 Identities = 67/82 (81%) Strand = Plus / Plus Query: 339 tgcggaaccgtcaaccgagtgactatcctgactgacaagtttgggcagcctaaaggtttt 398 |||||||| |||||||| || || || || | ||||||||||| ||||| || || ||| Sbjct: 108696 tgcggaacagtcaaccgggtaaccattctaatggacaagtttggacagccaaagggattt 108755 Query: 399 gcttatgttgaatttgttgaag 420 |||||||| || ||||| |||| Sbjct: 108756 gcttatgtggagtttgtagaag 108777
>gb|BC052544.1| Mus musculus cDNA clone IMAGE:1327591 Length = 1500 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 23 ggccatggaggacgaggagcacgagg 48 |||||||||||| ||||||||||||| Sbjct: 541 ggccatggaggatgaggagcacgagg 516
>dbj|AK133582.1| Mus musculus adult male pituitary gland cDNA, RIKEN full-length enriched library, clone:5330409F17 product:DnaJ (Hsp40) homolog, subfamily C, member 1, full insert sequence Length = 2131 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 23 ggccatggaggacgaggagcacgagg 48 |||||||||||| ||||||||||||| Sbjct: 1563 ggccatggaggatgaggagcacgagg 1588
>dbj|AK144228.1| Mus musculus bladder RCB-0544 MBT-2 cDNA, RIKEN full-length enriched library, clone:G430134N18 product:DnaJ (Hsp40) homolog, subfamily C, member 1, full insert sequence Length = 2493 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 23 ggccatggaggacgaggagcacgagg 48 |||||||||||| ||||||||||||| Sbjct: 1538 ggccatggaggatgaggagcacgagg 1563
>emb|BX829525.1|CNS0A1G5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB19ZA11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1847 Score = 44.1 bits (22), Expect = 0.37 Identities = 67/82 (81%) Strand = Plus / Plus Query: 339 tgcggaaccgtcaaccgagtgactatcctgactgacaagtttgggcagcctaaaggtttt 398 |||||||| |||||||| || || || || | ||||||||||| ||||| || || ||| Sbjct: 1378 tgcggaacagtcaaccgggtaaccattctaatggacaagtttggacagccaaagggattt 1437 Query: 399 gcttatgttgaatttgttgaag 420 |||||||| || ||||| |||| Sbjct: 1438 gcttatgtggagtttgtagaag 1459
>ref|NM_007869.1| Mus musculus DnaJ (Hsp40) homolog, subfamily C, member 1 (Dnajc1), mRNA Length = 1792 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 23 ggccatggaggacgaggagcacgagg 48 |||||||||||| ||||||||||||| Sbjct: 1258 ggccatggaggatgaggagcacgagg 1283
>emb|AL928557.6| Mouse DNA sequence from clone RP23-349H7 on chromosome 2, complete sequence Length = 159128 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 23 ggccatggaggacgaggagcacgagg 48 |||||||||||| ||||||||||||| Sbjct: 138011 ggccatggaggatgaggagcacgagg 137986
>gb|L16953.1|MUSMTJ1 Mouse tumor cell dnaJ-like protein 1 mRNA, complete cds Length = 1792 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 23 ggccatggaggacgaggagcacgagg 48 |||||||||||| ||||||||||||| Sbjct: 1258 ggccatggaggatgaggagcacgagg 1283
>gb|AY534123.1|SEG_AY534122S2 Aegilops tauschii transposons Caspar, XJ, Angela, and XJ, complete sequence; LRR protein WM1.7 (WM1.7) and LRR protein WM1.12 (WM1.12) genes, complete cds; transposons Ophelia2, Angela3s, and XJ3, complete sequence; LRR protein WM1.3 (WM1.3) gene, complete cds; Stowaway MITE, transposons XJ1, Jody, Angela, and XJ and Stowaway MITE, complete sequence; LRR protein WM1.2 (WM1.2) and LLR protein WM1.1 (WM1.1) genes, complete cds; transposons XJ, XA, Angela, and Fred and WM1.11 gene, complete sequence; RPM1-like sequence and LRR protein WM1.10 (WM1.10) genes, complete cds; and transposon XJ, complete sequence Length = 198649 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 104 cgacgacgccgccaagctgcacgagctcg 132 |||||||||||||| ||||| |||||||| Sbjct: 13174 cgacgacgccgccaggctgcccgagctcg 13202
>gb|AF488415.1| Triticum monococcum chromosome 7Am BAC 5K14 complete sequence Length = 168746 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 104 cgacgacgccgccaagctgcacgagctcg 132 |||||||||||||| ||||| |||||||| Sbjct: 55087 cgacgacgccgccaggctgcccgagctcg 55115
>gb|AF488416.1| Zea mays chromosome 9 BAC 9C20 complete sequence Length = 143300 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 180 ctccgcgagatgcaggccaag 200 ||||||||||||||||||||| Sbjct: 137758 ctccgcgagatgcaggccaag 137738
>gb|AC078891.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0092N12, complete sequence Length = 109198 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 162 gaggaggaggccgccgccctccgcg 186 ||||||||||||||||||| ||||| Sbjct: 92250 gaggaggaggccgccgcccaccgcg 92226
>gb|AC101777.8| Mus musculus chromosome 1, clone RP24-123J3, complete sequence Length = 177788 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 247 aagcaaaagaagagatggatt 267 ||||||||||||||||||||| Sbjct: 169233 aagcaaaagaagagatggatt 169253
>gb|AC004851.2| Homo sapiens PAC clone RP4-665P5 from 7, complete sequence Length = 71627 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 258 gagatggattctcgttctgtt 278 ||||||||||||||||||||| Sbjct: 61163 gagatggattctcgttctgtt 61143
>ref|XM_542111.2| PREDICTED: Canis familiaris similar to neuropathy target esterase (LOC484993), mRNA Length = 4425 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 114 gccaagctgcacgagctcgacgaga 138 |||||||||||||||||| |||||| Sbjct: 3133 gccaagctgcacgagctctacgaga 3157
>gb|AC091296.3| Pan troglodytes clone RP43-109G19, complete sequence Length = 185979 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 258 gagatggattctcgttctgtt 278 ||||||||||||||||||||| Sbjct: 66084 gagatggattctcgttctgtt 66104
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 162 gaggaggaggccgccgccctccgcg 186 ||||||||||||||||||| ||||| Sbjct: 910304 gaggaggaggccgccgcccaccgcg 910328
>gb|AC011478.3| Homo sapiens chromosome 19 clone CTC-565M22, complete sequence Length = 100147 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 258 gagatggattctcgttctgtt 278 ||||||||||||||||||||| Sbjct: 51379 gagatggattctcgttctgtt 51399
>gb|AC011477.5| Homo sapiens chromosome 19 clone CTC-559E9, complete sequence Length = 178710 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 258 gagatggattctcgttctgtt 278 ||||||||||||||||||||| Sbjct: 105778 gagatggattctcgttctgtt 105798
>gb|BC112748.1| Bos taurus cDNA clone MGC:137670 IMAGE:8168402, complete cds Length = 2994 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 114 gccaagctgcacgagctcgacgaga 138 |||||||||||||||||| |||||| Sbjct: 1283 gccaagctgcacgagctctacgaga 1307
>gb|AC098694.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJ1014H12, complete sequence Length = 129420 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 162 gaggaggaggccgccgccctccgcg 186 ||||||||||||||||||| ||||| Sbjct: 25878 gaggaggaggccgccgcccaccgcg 25854
>gb|AC011199.22| Homo sapiens chromosome 3 clone RP11-61K12, complete sequence Length = 152135 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 156 gagatggaggaggaggccgcc 176 ||||||||||||||||||||| Sbjct: 100450 gagatggaggaggaggccgcc 100470
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 162 gaggaggaggccgccgccctccgcg 186 ||||||||||||||||||| ||||| Sbjct: 910304 gaggaggaggccgccgcccaccgcg 910328
>emb|BX829898.1|CNS0A187 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB44ZG03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 501 Score = 42.1 bits (21), Expect = 1.5 Identities = 42/49 (85%) Strand = Plus / Plus Query: 372 gacaagtttgggcagcctaaaggttttgcttatgttgaatttgttgaag 420 ||||||||||| ||||| || || ||||||||||| || ||||| |||| Sbjct: 40 gacaagtttggacagccaaagggatttgcttatgtggagtttgtagaag 88
>gb|AC131072.13| Mus musculus chromosome 1, clone RP23-396F21, complete sequence Length = 192542 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 247 aagcaaaagaagagatggatt 267 ||||||||||||||||||||| Sbjct: 161489 aagcaaaagaagagatggatt 161469
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 78 gaggacgtcgagatgggcgccgggg 102 ||||||| ||||||||||||||||| Sbjct: 2664828 gaggacgacgagatgggcgccgggg 2664804
>gb|AC027229.17| Homo sapiens chromosome 18, clone RP11-737G21, complete sequence Length = 61501 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 258 gagatggattctcgttctgtt 278 ||||||||||||||||||||| Sbjct: 23837 gagatggattctcgttctgtt 23857
>gb|AC021302.11| Homo sapiens chromosome 18, clone RP11-203G13, complete sequence Length = 168535 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 258 gagatggattctcgttctgtt 278 ||||||||||||||||||||| Sbjct: 147390 gagatggattctcgttctgtt 147370
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 ccgtcgacgccgaggacgtcg 87 ||||||||||||||||||||| Sbjct: 5248405 ccgtcgacgccgaggacgtcg 5248425
>dbj|AB013395.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQN23 Length = 86064 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 27 atggaggacgaggagcacgaggtgtacgg 55 |||||||| |||||||||||||| ||||| Sbjct: 80947 atggaggaagaggagcacgaggtttacgg 80919
>gb|AY530950.1| Zea mays putative zinc finger protein (Z438D03.1), unknown (Z438D03.5), epsilon-COP (Z438D03.6), putative kinase (Z438D03.7), unknown (Z438D03.25), and C1-B73 (Z438D03.27) genes, complete cds Length = 185988 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 180 ctccgcgagatgcaggccaag 200 ||||||||||||||||||||| Sbjct: 110272 ctccgcgagatgcaggccaag 110252
>dbj|AK061346.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-E12, full insert sequence Length = 1165 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 197 caaggtcgccaaggagatgca 217 ||||||||||||||||||||| Sbjct: 647 caaggtcgccaaggagatgca 667
>gb|AC117450.7| Homo sapiens 3 BAC RP11-322C21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 65237 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 156 gagatggaggaggaggccgcc 176 ||||||||||||||||||||| Sbjct: 53684 gagatggaggaggaggccgcc 53664
>gb|AC004168.2|AC004168 Homo sapiens chromosome 4 clone B159L21 map 4q25, complete sequence Length = 185566 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 cagcagcattttaattcttgc 341 ||||||||||||||||||||| Sbjct: 93077 cagcagcattttaattcttgc 93057
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 162 gaggaggaggccgccgccctccgcg 186 ||||||||||||||||||| ||||| Sbjct: 910301 gaggaggaggccgccgcccaccgcg 910325
>gb|BC042060.1| Homo sapiens olfactory receptor, family 7, subfamily E, member 47 pseudogene, mRNA (cDNA clone IMAGE:5590288) Length = 1422 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 ggaggaggaggccgccgccc 180 |||||||||||||||||||| Sbjct: 265 ggaggaggaggccgccgccc 246
>ref|XM_511672.1| PREDICTED: Pan troglodytes similar to pericentrin 1; frount; nucleoporin Nup75 (LOC454876), mRNA Length = 2098 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 tcaaggagatggaggaggag 170 |||||||||||||||||||| Sbjct: 762 tcaaggagatggaggaggag 743
>gb|AC093104.2| Drosophila melanogaster clone BACR38O04, complete sequence Length = 167107 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 151 tcaaggagatggaggaggaggccg 174 ||||||||||||| |||||||||| Sbjct: 155301 tcaaggagatggaagaggaggccg 155324
>ref|XM_420948.1| PREDICTED: Gallus gallus similar to DEAF-1 related transcriptional regulator (NUDR); suppressin (LOC423017), mRNA Length = 2646 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 72 gacgccgaggacgtcgagatgggcgccg 99 ||||||||| || ||||||||||||||| Sbjct: 10 gacgccgagcacatcgagatgggcgccg 37
>ref|XM_323264.1| Neurospora crassa OR74A hypothetical protein (NCU03946.1) partial mRNA Length = 1260 Score = 40.1 bits (20), Expect = 5.7 Identities = 47/56 (83%) Strand = Plus / Plus Query: 138 atgaagcgccgtctcaaggagatggaggaggaggccgccgccctccgcgagatgca 193 |||||||||||| || |||||||| |||||||| ||| |||||||||||||| Sbjct: 754 atgaagcgccgtgtcgccgagatggaagaggaggctgccaaactccgcgagatgca 809
>ref|XM_952492.1| Neurospora crassa OR74A hypothetical protein (NCU03946.1) partial mRNA Length = 1260 Score = 40.1 bits (20), Expect = 5.7 Identities = 47/56 (83%) Strand = Plus / Plus Query: 138 atgaagcgccgtctcaaggagatggaggaggaggccgccgccctccgcgagatgca 193 |||||||||||| || |||||||| |||||||| ||| |||||||||||||| Sbjct: 754 atgaagcgccgtgtcgccgagatggaagaggaggctgccaaactccgcgagatgca 809
>gb|AC147140.4| Pan troglodytes BAC clone CH251-329N7 from Y, complete sequence Length = 149061 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 atggaggaggaggccgccgccctc 182 |||||||||||||| ||||||||| Sbjct: 115400 atggaggaggaggctgccgccctc 115423
>ref|NM_023868.1| Mus musculus ryanodine receptor 2, cardiac (Ryr2), mRNA Length = 14904 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ctcaaggagatggaggagga 169 |||||||||||||||||||| Sbjct: 7467 ctcaaggagatggaggagga 7448
>gb|AC131329.13| Mus musculus chromosome 13, clone RP23-474B11, complete sequence Length = 172830 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ctcaaggagatggaggagga 169 |||||||||||||||||||| Sbjct: 147990 ctcaaggagatggaggagga 147971
>gb|AC147154.4| Pan troglodytes BAC clone CH251-175E24 from Y, complete sequence Length = 157260 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 atggaggaggaggccgccgccctc 182 |||||||||||||| ||||||||| Sbjct: 26887 atggaggaggaggctgccgccctc 26910
>gb|AC147119.2| Pan troglodytes BAC clone CH251-518N19 from Y, complete sequence Length = 241976 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 atggaggaggaggccgccgccctc 182 |||||||||||||| ||||||||| Sbjct: 109842 atggaggaggaggctgccgccctc 109865
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 181 tccgcgagatgcaggccaaggtcg 204 |||||||||||| ||||||||||| Sbjct: 466979 tccgcgagatgctggccaaggtcg 466956
>gb|AY574035.1| Zea mays rust resistance protein rp3-1 (rp3-1) gene, complete cds; and truncated rust resistance protein rp3-2t (rp3-2) gene, complete sequence Length = 276326 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tccgcgagatgcaggccaag 200 |||||||||||||||||||| Sbjct: 248118 tccgcgagatgcaggccaag 248099
>gb|AY316747.1| Rhizobium sp. NGR234 megaplasmid 2 contig 1, complete sequence Length = 357655 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 gccaaggtcgccaaggagat 214 |||||||||||||||||||| Sbjct: 305652 gccaaggtcgccaaggagat 305671
>ref|XM_533910.2| PREDICTED: Canis familiaris similar to tartrate resistant acid phosphatase 5 precursor (LOC476705), mRNA Length = 1774 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 ggaggaggccgccgccctcc 183 |||||||||||||||||||| Sbjct: 533 ggaggaggccgccgccctcc 514
>emb|CR954256.1| Anopheles gambiae Pen-1 region; BAC clones 30N20, 10K02, 13E09, 31J16 and 01G10 from library NotreDame1 of Anopheles gambiae (African malaria mosquito) strain PEST Length = 447895 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 211 agatgcaaggcggagatcctaatg 234 |||||||||||||||| ||||||| Sbjct: 337838 agatgcaaggcggagaacctaatg 337815
>ref|XM_846583.1| PREDICTED: Canis familiaris similar to leiomodin 3 (fetal) (LOC609334), mRNA Length = 1512 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 ggaggacgaggagcacgagg 48 |||||||||||||||||||| Sbjct: 468 ggaggacgaggagcacgagg 487
>ref|XM_445723.1| Candida glabrata CBS138, CAGL0E00803g partial mRNA Length = 1140 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 cgaggacgtcgagatgggcg 96 |||||||||||||||||||| Sbjct: 285 cgaggacgtcgagatgggcg 304
>gb|AC087728.3| Papio anubis clone RP41-340H23, complete sequence Length = 198888 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 gagatggattctcgttctgt 277 |||||||||||||||||||| Sbjct: 141317 gagatggattctcgttctgt 141336
>emb|CR956410.6| Pig DNA sequence from clone PigE-123H20 on chromosome 7, complete sequence Length = 175487 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 caaggagatggaggaggagg 171 |||||||||||||||||||| Sbjct: 130372 caaggagatggaggaggagg 130391
>emb|CR734025.2|CNS0GT5K Tetraodon nigroviridis full-length cDNA Length = 887 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 154 aggagatggaggaggaggccgccgccct 181 |||||||| || |||||||||||||||| Sbjct: 432 aggagatgaagaaggaggccgccgccct 459
>emb|CR733341.2|CNS0GSNN Tetraodon nigroviridis full-length cDNA Length = 889 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 154 aggagatggaggaggaggccgccgccct 181 |||||||| || |||||||||||||||| Sbjct: 434 aggagatgaagaaggaggccgccgccct 461
>gb|AC009508.3| Homo sapiens BAC clone RP11-564N1 from 7, complete sequence Length = 119414 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 316 aagtgcagcagcattttaattctt 339 |||| ||||||||||||||||||| Sbjct: 5212 aagttcagcagcattttaattctt 5189
>emb|CR651620.2|CNS0F1RE Tetraodon nigroviridis full-length cDNA Length = 887 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 154 aggagatggaggaggaggccgccgccct 181 |||||||| || |||||||||||||||| Sbjct: 433 aggagatgaagaaggaggccgccgccct 460
>emb|CR647680.2|CNS0EYPY Tetraodon nigroviridis full-length cDNA Length = 888 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 154 aggagatggaggaggaggccgccgccct 181 |||||||| || |||||||||||||||| Sbjct: 434 aggagatgaagaaggaggccgccgccct 461
>emb|CR646182.2|CNS0EXKC Tetraodon nigroviridis full-length cDNA Length = 962 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 154 aggagatggaggaggaggccgccgccct 181 |||||||| || |||||||||||||||| Sbjct: 507 aggagatgaagaaggaggccgccgccct 534
>gb|AC146050.3| Pan troglodytes BAC clone RP43-72L14 from 7, complete sequence Length = 154653 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 316 aagtgcagcagcattttaattctt 339 |||| ||||||||||||||||||| Sbjct: 149541 aagttcagcagcattttaattctt 149518
>emb|CR635081.2|CNS0EOZZ Tetraodon nigroviridis full-length cDNA Length = 882 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 154 aggagatggaggaggaggccgccgccct 181 |||||||| || |||||||||||||||| Sbjct: 428 aggagatgaagaaggaggccgccgccct 455
>gb|AY883559.2| Zea mays cultivar inbred line B73 teosinte glume architecture 1 (tga1) gene, complete cds Length = 169976 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tccgcgagatgcaggccaag 200 |||||||||||||||||||| Sbjct: 68195 tccgcgagatgcaggccaag 68214
>gb|AC165173.2| Zea mays clone ZMMBBb-125O19, complete sequence Length = 157660 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tccgcgagatgcaggccaag 200 |||||||||||||||||||| Sbjct: 129586 tccgcgagatgcaggccaag 129567 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tccgcgagatgcaggccaag 200 |||||||||||||||||||| Sbjct: 49085 tccgcgagatgcaggccaag 49104
>emb|AL157694.7| Human DNA sequence from clone RP11-157B21 on chromosome 13q12.2-13.3 Contains part of the DCAMKL1 gene for doublecortin and CaM kinase-like 1 (DCLK KIAA0369), complete sequence Length = 76339 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 395 ttttgcttatgttgaatttg 414 |||||||||||||||||||| Sbjct: 17165 ttttgcttatgttgaatttg 17184
>ref|XM_784523.1| PREDICTED: Strongylocentrotus purpuratus similar to adaptor-related protein complex 1, mu 1 subunit (LOC584669), mRNA Length = 1179 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 tcaaggagatggaggaggag 170 |||||||||||||||||||| Sbjct: 194 tcaaggagatggaggaggag 213
>gb|AF514995.1| Homo sapiens nucleoporin Nup75 mRNA, complete cds Length = 2147 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 tcaaggagatggaggaggag 170 |||||||||||||||||||| Sbjct: 583 tcaaggagatggaggaggag 564
>emb|CR380951.1| Candida glabrata strain CBS138 chromosome E complete sequence Length = 687501 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 cgaggacgtcgagatgggcg 96 |||||||||||||||||||| Sbjct: 72846 cgaggacgtcgagatgggcg 72827
>gb|AC159208.2| Mus musculus BAC clone RP23-152K15 from chromosome 13, complete sequence Length = 195714 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 ctcaaggagatggaggagga 169 |||||||||||||||||||| Sbjct: 186763 ctcaaggagatggaggagga 186782
>emb|BX908812.1| Neurospora crassa DNA linkage group VI Cosmid contig G17A4 Length = 134053 Score = 40.1 bits (20), Expect = 5.7 Identities = 47/56 (83%) Strand = Plus / Minus Query: 138 atgaagcgccgtctcaaggagatggaggaggaggccgccgccctccgcgagatgca 193 |||||||||||| || |||||||| |||||||| ||| |||||||||||||| Sbjct: 83685 atgaagcgccgtgtcgccgagatggaagaggaggctgccaaactccgcgagatgca 83630
>emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete genome; segment 5/29 Length = 339650 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 cgcggcggccatggaggacg 36 |||||||||||||||||||| Sbjct: 239998 cgcggcggccatggaggacg 239979
>emb|AL596169.1| Listeria innocua Clip11262 complete genome, segment 7/12 Length = 239050 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 268 ctcgttctgtttttgttggaaatg 291 |||||||||||||||||| ||||| Sbjct: 84275 ctcgttctgtttttgttgtaaatg 84252
>gb|AF498261.1| Homo sapiens frount protein mRNA, complete cds Length = 1971 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 tcaaggagatggaggaggag 170 |||||||||||||||||||| Sbjct: 503 tcaaggagatggaggaggag 484
>emb|CR860977.1| Pongo pygmaeus mRNA; cDNA DKFZp459G0627 (from clone DKFZp459G0627) Length = 1312 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 18 gcggcggccatggaggacgaggag 41 |||||||||||||| ||||||||| Sbjct: 38 gcggcggccatggacgacgaggag 61
>emb|AL833893.1|HSM805194 Homo sapiens mRNA; cDNA DKFZp434I1130 (from clone DKFZp434I1130) Length = 2111 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 tcaaggagatggaggaggag 170 |||||||||||||||||||| Sbjct: 508 tcaaggagatggaggaggag 489
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 atggaggaggaggccgccgccctc 182 |||||||||||||| ||||||||| Sbjct: 10337787 atggaggaggaggctgccgccctc 10337810 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 atggaggaggaggccgccgccctc 182 |||||||||||||| ||||||||| Sbjct: 5334884 atggaggaggaggctgccgccctc 5334861 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 atggaggaggaggccgccgccctc 182 |||||||||||||| ||||||||| Sbjct: 3921661 atggaggaggaggctgccgccctc 3921638 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 atggaggaggaggccgccgccctc 182 |||||||||||||| ||||||||| Sbjct: 3861138 atggaggaggaggctgccgccctc 3861115
>emb|CR614721.1| full-length cDNA clone CS0DL012YF01 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1890 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 tcaaggagatggaggaggag 170 |||||||||||||||||||| Sbjct: 545 tcaaggagatggaggaggag 526
>dbj|AK022611.1| Homo sapiens cDNA FLJ12549 fis, clone NT2RM4000689 Length = 2118 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 tcaaggagatggaggaggag 170 |||||||||||||||||||| Sbjct: 545 tcaaggagatggaggaggag 526
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 tccagaagaagtgcagcagc 327 |||||||||||||||||||| Sbjct: 3225437 tccagaagaagtgcagcagc 3225418
>ref|NM_165589.1| Drosophila melanogaster Pabp2 CG2163-RB, transcript variant B (Pabp2), mRNA Length = 1399 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 151 tcaaggagatggaggaggaggccg 174 ||||||||||||| |||||||||| Sbjct: 576 tcaaggagatggaagaggaggccg 599
>gb|AC025647.9| Homo sapiens, clone RP11-316J7, complete sequence Length = 155663 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 gagatggattctcgttctgt 277 |||||||||||||||||||| Sbjct: 83162 gagatggattctcgttctgt 83143
>ref|NM_057554.2| Drosophila melanogaster Pabp2 CG2163-RA, transcript variant A (Pabp2), mRNA Length = 1887 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 151 tcaaggagatggaggaggaggccg 174 ||||||||||||| |||||||||| Sbjct: 576 tcaaggagatggaagaggaggccg 599
>gb|AC090403.8| Homo sapiens chromosome 18, clone RP11-739N10, complete sequence Length = 181250 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 gaagcaaaagaagagatgga 265 |||||||||||||||||||| Sbjct: 87923 gaagcaaaagaagagatgga 87904
>gb|AC174482.4| Pan troglodytes BAC clone CH251-527O19 from chromosome y, complete sequence Length = 189332 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 atggaggaggaggccgccgccctc 182 |||||||||||||| ||||||||| Sbjct: 57155 atggaggaggaggctgccgccctc 57178
>gb|AF159890.1|AF159890 Lapemis hardwickii low density lipoprotein receptor-related protein 7 mRNA, partial cds Length = 584 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 caaggagatggaggaggagg 171 |||||||||||||||||||| Sbjct: 228 caaggagatggaggaggagg 209
>gb|AC022176.6| Homo sapiens chromosome , clone RP11-149C3, complete sequence Length = 184026 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 gaagcaaaagaagagatgga 265 |||||||||||||||||||| Sbjct: 179287 gaagcaaaagaagagatgga 179268
>gb|AC022211.5|AC022211 Homo sapiens BAC clone RP11-649A18 from 17, complete sequence Length = 191155 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 tcaaggagatggaggaggag 170 |||||||||||||||||||| Sbjct: 107873 tcaaggagatggaggaggag 107854
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 gcggcggccatggaggacga 37 |||||||||||||||||||| Sbjct: 24392756 gcggcggccatggaggacga 24392775
>gb|AC079148.9| Homo sapiens BAC clone RP11-111J6 from 2, complete sequence Length = 176690 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 gatggaggaggaggccgccg 177 |||||||||||||||||||| Sbjct: 22594 gatggaggaggaggccgccg 22575
>emb|BX649612.6| Zebrafish DNA sequence from clone CH211-220L16 in linkage group 18, complete sequence Length = 223348 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 aggagatggaggaggaggcc 173 |||||||||||||||||||| Sbjct: 144467 aggagatggaggaggaggcc 144486
>gb|AC025259.49| Homo sapiens 12 BAC RP11-1100L3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 212622 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 ggaggaggaggccgccgccc 180 |||||||||||||||||||| Sbjct: 3761 ggaggaggaggccgccgccc 3780
>gb|AF295105.1|AF295105 Mus musculus cardiac Ca2+ release channel mRNA, complete cds Length = 14904 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ctcaaggagatggaggagga 169 |||||||||||||||||||| Sbjct: 7467 ctcaaggagatggaggagga 7448
>gb|AC068704.4|AC068704 Homo sapiens BAC clone RP11-434F12 from Y, complete sequence Length = 15002 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 atggaggaggaggccgccgccctc 182 |||||||||||||| ||||||||| Sbjct: 11444 atggaggaggaggctgccgccctc 11421
>gb|AC007241.3|AC007241 Homo sapiens BAC clone RP11-157F24 from Y, complete sequence Length = 161868 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 atggaggaggaggccgccgccctc 182 |||||||||||||| ||||||||| Sbjct: 44989 atggaggaggaggctgccgccctc 45012
>ref|XM_225491.3| PREDICTED: Rattus norvegicus similar to cardiac Ca2+ release channel (LOC498783), mRNA Length = 8321 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ctcaaggagatggaggagga 169 |||||||||||||||||||| Sbjct: 6962 ctcaaggagatggaggagga 6943
>gb|AC156450.2| Volvox carteri clone JGIAOBO-41M18, complete sequence Length = 36468 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 gcacgcggcggccatggagg 33 |||||||||||||||||||| Sbjct: 26348 gcacgcggcggccatggagg 26367
>gb|AF546189.1| Contiguous genomic DNA sequence comprising the 19-kDa-zein gene family from Zea mays, complete sequence Length = 116115 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tccgcgagatgcaggccaag 200 |||||||||||||||||||| Sbjct: 90268 tccgcgagatgcaggccaag 90249
>gb|AC146246.4| Pan troglodytes BAC clone clone CH251-154C4 from y, complete sequence Length = 149616 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 atggaggaggaggccgccgccctc 182 |||||||||||||| ||||||||| Sbjct: 122755 atggaggaggaggctgccgccctc 122732
>dbj|AP005470.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0043B22 Length = 158857 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 ggaggaggaggccgccgccc 180 |||||||||||||||||||| Sbjct: 48126 ggaggaggaggccgccgccc 48107
>dbj|AP003840.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1634_B10 Length = 100294 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 gcggcggccatggaggacga 37 |||||||||||||||||||| Sbjct: 18623 gcggcggccatggaggacga 18642
>dbj|AK106521.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-C11, full insert sequence Length = 2715 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 gcggcggccatggaggacga 37 |||||||||||||||||||| Sbjct: 48 gcggcggccatggaggacga 67
>dbj|AK102627.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033099K03, full insert sequence Length = 1537 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 gcggcggccatggaggacga 37 |||||||||||||||||||| Sbjct: 49 gcggcggccatggaggacga 68
>ref|NG_004636.1| Homo sapiens chromosome Y palindromes P4 and P5 (P4-P5@) on chromosome Y Length = 1351786 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 atggaggaggaggccgccgccctc 182 |||||||||||||| ||||||||| Sbjct: 769611 atggaggaggaggctgccgccctc 769634 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 atggaggaggaggccgccgccctc 182 |||||||||||||| ||||||||| Sbjct: 104207 atggaggaggaggctgccgccctc 104184
>gb|AY555143.1| Zea may BAC clone c573L14, complete sequence Length = 144792 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tccgcgagatgcaggccaag 200 |||||||||||||||||||| Sbjct: 95227 tccgcgagatgcaggccaag 95246
>gb|AF116341.1|AF116341 Drosophila melanogaster poly(A)-binding protein II (Pabp2) gene, complete cds Length = 3709 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 151 tcaaggagatggaggaggaggccg 174 ||||||||||||| |||||||||| Sbjct: 1280 tcaaggagatggaagaggaggccg 1303
>emb|AL590148.8| Zebrafish DNA sequence from clone RP71-30I22 in linkage group 8 Contains part of a novel gene for a protein similar to human FLJ12550, the pim1 gene for pim-1 oncogene (proviral integration site 1), part of a novel gene for a protein similar to vertebrate UDP-galactose transporters, a novel gene for a protein similar to vertebrate caldesmon 1 (CALD1) and a CpG island, complete sequence Length = 140984 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 tgtttttgttggaaatgttg 294 |||||||||||||||||||| Sbjct: 140677 tgtttttgttggaaatgttg 140696
>gb|AC008370.1|AC008370 Drosophila melanogaster, chromosome 2R, region 44B-44C, BAC clones BACR09N11 and BACR40A15, complete sequence Length = 132171 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 151 tcaaggagatggaggaggaggccg 174 ||||||||||||| |||||||||| Sbjct: 15117 tcaaggagatggaagaggaggccg 15140
>gb|AE003838.3| Drosophila melanogaster chromosome 2R, section 12 of 73 of the complete sequence Length = 226833 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 151 tcaaggagatggaggaggaggccg 174 ||||||||||||| |||||||||| Sbjct: 89876 tcaaggagatggaagaggaggccg 89899
>dbj|AB088224.1| Streptomyces rochei plasmid pSLA2-L DNA, complete sequence Length = 210614 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 cgccgggggcgacgacgccg 114 |||||||||||||||||||| Sbjct: 127426 cgccgggggcgacgacgccg 127445
>dbj|AP001359.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-820L6, complete sequences Length = 221535 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 gagatggattctcgttctgt 277 |||||||||||||||||||| Sbjct: 47403 gagatggattctcgttctgt 47384
>dbj|AP001924.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-166D19, complete sequence Length = 190360 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 gagatggattctcgttctgt 277 |||||||||||||||||||| Sbjct: 129042 gagatggattctcgttctgt 129023
>dbj|AP003474.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1942A3, complete sequence Length = 165901 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 gagatggattctcgttctgt 277 |||||||||||||||||||| Sbjct: 135043 gagatggattctcgttctgt 135024
>gb|AC174767.1| Gasterosteus aculeatus chromosome VMRC28-49C03, complete sequence Length = 136807 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 aagaagtgcagcagcattttaatt 336 |||||||| ||||||||||||||| Sbjct: 136697 aagaagtggagcagcattttaatt 136674
>gb|AC141473.4| Mus musculus BAC clone RP24-187J17 from 3, complete sequence Length = 178156 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 396 tttgcttatgttgaatttgttgaa 419 ||||||| |||||||||||||||| Sbjct: 177473 tttgcttctgttgaatttgttgaa 177450
>gb|AC133160.4| Mus musculus BAC clone RP24-531K24 from chromosome 3, complete sequence Length = 163562 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 396 tttgcttatgttgaatttgttgaa 419 ||||||| |||||||||||||||| Sbjct: 71541 tttgcttctgttgaatttgttgaa 71518
>gb|BC000697.2| Homo sapiens nucleoporin 85kDa, mRNA (cDNA clone MGC:3092 IMAGE:3349383), complete cds Length = 2138 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 tcaaggagatggaggaggag 170 |||||||||||||||||||| Sbjct: 574 tcaaggagatggaggaggag 555
>ref|NM_024844.3| Homo sapiens nucleoporin 85kDa (NUP85), mRNA Length = 2311 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 tcaaggagatggaggaggag 170 |||||||||||||||||||| Sbjct: 763 tcaaggagatggaggaggag 744
>gb|L34934.1|DROROX2Y Drosophila melanogaster RRM-type RNA binding protein (rox2) mRNA, complete cds Length = 1739 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 151 tcaaggagatggaggaggaggccg 174 ||||||||||||| |||||||||| Sbjct: 578 tcaaggagatggaagaggaggccg 601
>emb|AL603829.5| Mouse DNA sequence from clone RP23-416G21 on chromosome 11, complete sequence Length = 226220 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 aaggagatggaggaggaggc 172 |||||||||||||||||||| Sbjct: 57001 aaggagatggaggaggaggc 56982
>emb|AL138498.5|CNS01DWT Human chromosome 14 DNA sequence BAC R-168D12 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 158885 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 gagatggattctcgttctgt 277 |||||||||||||||||||| Sbjct: 78473 gagatggattctcgttctgt 78454
>dbj|AB021222.1| Streptomyces rochei type-II polyketide synthase genes, partial and complete cds Length = 4767 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 cgccgggggcgacgacgccg 114 |||||||||||||||||||| Sbjct: 1934 cgccgggggcgacgacgccg 1915 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,737,041 Number of Sequences: 3902068 Number of extensions: 4737041 Number of successful extensions: 121939 Number of sequences better than 10.0: 161 Number of HSP's better than 10.0 without gapping: 164 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 120781 Number of HSP's gapped (non-prelim): 1148 length of query: 428 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 406 effective length of database: 17,147,199,772 effective search space: 6961763107432 effective search space used: 6961763107432 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)