ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd18p23 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DQ377062.1| Oryza sativa (japonica cultivar-group) U1 small nuclear ribonucleoprotein 70K mRNA, complete cds, alternatively spliced Length = 1815 Score = 531 bits (268), Expect = e-148 Identities = 475/544 (87%) Strand = Plus / Plus Query: 12 cgcgccaacgtccagcagctcaagctcatggggcagggccaccctacgggcctcacgccg 71 |||| |||||| |||||||||||||| ||||||||||| ||||| ||||||||||| || Sbjct: 161 cgcgtcaacgtgcagcagctcaagctgatggggcagggacacccgacgggcctcaccccc 220 Query: 72 aacctgctcaagctgttcgaggcgcggcctatgctcgagcacaagccgcccgtccagaag 131 |||||||||||||| |||||| | || || |||||| ||||||||||||| ||||| Sbjct: 221 aacctgctcaagctcttcgagccccgcccgccgctcgacttcaagccgcccgtcgagaag 280 Query: 132 cgcaagttgccggcctacacggggatggcgcagtttgtgtcgcggtttgccgagcctggc 191 |||||||||||||||||||| |||||||||||||| ||||||| |||||| ||||| || Sbjct: 281 cgcaagttgccggcctacactgggatggcgcagttcgtgtcgcagtttgcggagcccggt 340 Query: 192 gacccagagtatgcgccgcctgtcccaacgtgcgagactaaggccgaaaagaaggataga 251 ||||| ||||| ||||| || ||||| || |||||||| ||||| |||||||||||||| Sbjct: 341 gaccctgagtacgcgccacccgtccccacatgcgagaccaaggctgaaaagaaggatagg 400 Query: 252 atcaggaaacttaagcttgagcaaggtgcagataaggtggccaaagagcttcagaactat 311 ||| | ||| ||||||||| |||||||| | ||||||||| ||||||||||||| ||| Sbjct: 401 atccgcaaaagtaagcttgaccaaggtgcggctaaggtggctgaagagcttcagaaatat 460 Query: 312 aacccacaaagtgatcccaataccacttcagatccgtacaaaacactcttcgttgcaaga 371 ||||||| ||||| |||||| ||||| |||||| |||||||||||||| ||||||||| Sbjct: 461 gacccacagagtgaccccaatgccactggagatccatacaaaacactctttgttgcaaga 520 Query: 372 cttaattacgagacatctgagagtagggttaagcgggagtttgaagcctatgggcctatt 431 ||||| || ||||| |||||| |||||| ||||||||||||||||| |||||||||||| Sbjct: 521 cttaactatgagacgtctgagcatagggtcaagcgggagtttgaagcttatgggcctatt 580 Query: 432 aaaagggtacggctcgtaactgacaaggatacgaataaacctagaggatatgcattcata 491 |||||||||||||| || || |||||||| || |||||||||||||||||||||||||| Sbjct: 581 aaaagggtacggcttgtgaccgacaaggaaacaaataaacctagaggatatgcattcatc 640 Query: 492 gagtatatgcatactcgggatatgaaaaatgcttacaagcaagctgatgggagaaaagta 551 ||||||||||| || ||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 641 gagtatatgcacacccgggacatgaaaaatgcttacaagcaagcagatgggagaaaagtg 700 Query: 552 gaca 555 |||| Sbjct: 701 gaca 704
>dbj|AK121007.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023046L24, full insert sequence Length = 1798 Score = 531 bits (268), Expect = e-148 Identities = 475/544 (87%) Strand = Plus / Plus Query: 12 cgcgccaacgtccagcagctcaagctcatggggcagggccaccctacgggcctcacgccg 71 |||| |||||| |||||||||||||| ||||||||||| ||||| ||||||||||| || Sbjct: 161 cgcgtcaacgtgcagcagctcaagctgatggggcagggacacccgacgggcctcaccccc 220 Query: 72 aacctgctcaagctgttcgaggcgcggcctatgctcgagcacaagccgcccgtccagaag 131 |||||||||||||| |||||| | || || |||||| ||||||||||||| ||||| Sbjct: 221 aacctgctcaagctcttcgagccccgcccgccgctcgacttcaagccgcccgtcgagaag 280 Query: 132 cgcaagttgccggcctacacggggatggcgcagtttgtgtcgcggtttgccgagcctggc 191 |||||||||||||||||||| |||||||||||||| ||||||| |||||| ||||| || Sbjct: 281 cgcaagttgccggcctacactgggatggcgcagttcgtgtcgcagtttgcggagcccggt 340 Query: 192 gacccagagtatgcgccgcctgtcccaacgtgcgagactaaggccgaaaagaaggataga 251 ||||| ||||| ||||| || ||||| || |||||||| ||||| |||||||||||||| Sbjct: 341 gaccctgagtacgcgccacccgtccccacatgcgagaccaaggctgaaaagaaggatagg 400 Query: 252 atcaggaaacttaagcttgagcaaggtgcagataaggtggccaaagagcttcagaactat 311 ||| | ||| ||||||||| |||||||| | ||||||||| ||||||||||||| ||| Sbjct: 401 atccgcaaaagtaagcttgaccaaggtgcggctaaggtggctgaagagcttcagaaatat 460 Query: 312 aacccacaaagtgatcccaataccacttcagatccgtacaaaacactcttcgttgcaaga 371 ||||||| ||||| |||||| ||||| |||||| |||||||||||||| ||||||||| Sbjct: 461 gacccacagagtgaccccaatgccactggagatccatacaaaacactctttgttgcaaga 520 Query: 372 cttaattacgagacatctgagagtagggttaagcgggagtttgaagcctatgggcctatt 431 ||||| || ||||| |||||| |||||| ||||||||||||||||| |||||||||||| Sbjct: 521 cttaactatgagacgtctgagcatagggtcaagcgggagtttgaagcttatgggcctatt 580 Query: 432 aaaagggtacggctcgtaactgacaaggatacgaataaacctagaggatatgcattcata 491 |||||||||||||| || || |||||||| || |||||||||||||||||||||||||| Sbjct: 581 aaaagggtacggcttgtgaccgacaaggaaacaaataaacctagaggatatgcattcatc 640 Query: 492 gagtatatgcatactcgggatatgaaaaatgcttacaagcaagctgatgggagaaaagta 551 ||||||||||| || ||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 641 gagtatatgcacacccgggacatgaaaaatgcttacaagcaagcagatgggagaaaagtg 700 Query: 552 gaca 555 |||| Sbjct: 701 gaca 704
>dbj|AK059504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-A09, full insert sequence Length = 1796 Score = 531 bits (268), Expect = e-148 Identities = 475/544 (87%) Strand = Plus / Plus Query: 12 cgcgccaacgtccagcagctcaagctcatggggcagggccaccctacgggcctcacgccg 71 |||| |||||| |||||||||||||| ||||||||||| ||||| ||||||||||| || Sbjct: 160 cgcgtcaacgtgcagcagctcaagctgatggggcagggacacccgacgggcctcaccccc 219 Query: 72 aacctgctcaagctgttcgaggcgcggcctatgctcgagcacaagccgcccgtccagaag 131 |||||||||||||| |||||| | || || |||||| ||||||||||||| ||||| Sbjct: 220 aacctgctcaagctcttcgagccccgcccgccgctcgacttcaagccgcccgtcgagaag 279 Query: 132 cgcaagttgccggcctacacggggatggcgcagtttgtgtcgcggtttgccgagcctggc 191 |||||||||||||||||||| |||||||||||||| ||||||| |||||| ||||| || Sbjct: 280 cgcaagttgccggcctacactgggatggcgcagttcgtgtcgcagtttgcggagcccggt 339 Query: 192 gacccagagtatgcgccgcctgtcccaacgtgcgagactaaggccgaaaagaaggataga 251 ||||| ||||| ||||| || ||||| || |||||||| ||||| |||||||||||||| Sbjct: 340 gaccctgagtacgcgccacccgtccccacatgcgagaccaaggctgaaaagaaggatagg 399 Query: 252 atcaggaaacttaagcttgagcaaggtgcagataaggtggccaaagagcttcagaactat 311 ||| | ||| ||||||||| |||||||| | ||||||||| ||||||||||||| ||| Sbjct: 400 atccgcaaaagtaagcttgaccaaggtgcggctaaggtggctgaagagcttcagaaatat 459 Query: 312 aacccacaaagtgatcccaataccacttcagatccgtacaaaacactcttcgttgcaaga 371 ||||||| ||||| |||||| ||||| |||||| |||||||||||||| ||||||||| Sbjct: 460 gacccacagagtgaccccaatgccactggagatccatacaaaacactctttgttgcaaga 519 Query: 372 cttaattacgagacatctgagagtagggttaagcgggagtttgaagcctatgggcctatt 431 ||||| || ||||| |||||| |||||| ||||||||||||||||| |||||||||||| Sbjct: 520 cttaactatgagacgtctgagcatagggtcaagcgggagtttgaagcttatgggcctatt 579 Query: 432 aaaagggtacggctcgtaactgacaaggatacgaataaacctagaggatatgcattcata 491 |||||||||||||| || || |||||||| || |||||||||||||||||||||||||| Sbjct: 580 aaaagggtacggcttgtgaccgacaaggaaacaaataaacctagaggatatgcattcatc 639 Query: 492 gagtatatgcatactcgggatatgaaaaatgcttacaagcaagctgatgggagaaaagta 551 ||||||||||| || ||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 640 gagtatatgcacacccgggacatgaaaaatgcttacaagcaagcagatgggagaaaagtg 699 Query: 552 gaca 555 |||| Sbjct: 700 gaca 703
>gb|DQ019633.1| Triticum aestivum U1 snRNP-interacting 70 kDa protein (U1-70K) mRNA, complete cds Length = 1729 Score = 436 bits (220), Expect = e-119 Identities = 448/524 (85%) Strand = Plus / Plus Query: 27 cagctcaagctcatggggcagggccaccctacgggcctcacgccgaacctgctcaagctg 86 |||||||||||||| |||||| |||| || ||||| || ||| |||||||||| |||||| Sbjct: 117 cagctcaagctcatcgggcagagccatccgacggggctgacgacgaacctgctgaagctg 176 Query: 87 ttcgaggcgcggcctatgctcgagcacaagccgcccgtccagaagcgcaagttgccggcc 146 |||||| | ||||| |||||||||||||||||| || ||||||||||||||||||| Sbjct: 177 ttcgagccacggccaccgctcgagcacaagccgccgctcgagaagcgcaagttgccggct 236 Query: 147 tacacggggatggcgcagtttgtgtcgcggtttgccgagcctggcgacccagagtatgcg 206 ||| | || ||| |||||||||| ||| |||| || |||||||| ||||| |||||||| Sbjct: 237 tactctggaatgtcgcagtttgtatcgaggttcgcagagcctggtgaccccgagtatgct 296 Query: 207 ccgcctgtcccaacgtgcgagactaaggccgaaaagaaggatagaatcaggaaacttaag 266 ||||||||||| || |||||||||| ||| |||||||||||||||||| | |||||||| Sbjct: 297 ccgcctgtccccacatgcgagactagggctgaaaagaaggatagaatccgtcaacttaag 356 Query: 267 cttgagcaaggtgcagataaggtggccaaagagcttcagaactataacccacaaagtgat 326 |||||| ||||||||| |||||| || ||||||| ||||| ||| ||||||||| ||| Sbjct: 357 cttgaggaaggtgcagctaaggttgctgaagagctccagaagtatgacccacaaaatgac 416 Query: 327 cccaataccacttcagatccgtacaaaacactcttcgttgcaagacttaattacgagaca 386 |||||| |||| |||||| |||||||||||||| |||||| ||||| ||||||||| Sbjct: 417 cccaatgtcactggagatccatacaaaacactctttgttgcacgacttggctacgagaca 476 Query: 387 tctgagagtagggttaagcgggagtttgaagcctatgggcctattaaaagggtacggctc 446 || ||| | |||||| |||| |||||||| ||||||||||||||||||||||||||| Sbjct: 477 tccgagcagaaggttaaaagggactttgaagcttatgggcctattaaaagggtacggctc 536 Query: 447 gtaactgacaaggatacgaataaacctagaggatatgcattcatagagtatatgcatact 506 ||||| ||||||| || |||||||||||||||||||||||| |||||||| || ||| Sbjct: 537 gtaaccgacaaggtaacaaataaacctagaggatatgcattcgtagagtatgcacacact 596 Query: 507 cgggatatgaaaaatgcttacaagcaagctgatgggagaaaagt 550 ||||| ||||||| |||||| ||||||||||||||||||||||| Sbjct: 597 cgggacatgaaaagtgcttataagcaagctgatgggagaaaagt 640
>gb|DQ377064.1| Oryza sativa (japonica cultivar-group) U1 small nuclear ribonucleoprotein 70K splice variant 2 mRNA, complete cds, alternatively spliced Length = 3284 Score = 391 bits (197), Expect = e-105 Identities = 371/429 (86%) Strand = Plus / Plus Query: 12 cgcgccaacgtccagcagctcaagctcatggggcagggccaccctacgggcctcacgccg 71 |||| |||||| |||||||||||||| ||||||||||| ||||| ||||||||||| || Sbjct: 161 cgcgtcaacgtgcagcagctcaagctgatggggcagggacacccgacgggcctcaccccc 220 Query: 72 aacctgctcaagctgttcgaggcgcggcctatgctcgagcacaagccgcccgtccagaag 131 |||||||||||||| |||||| | || || |||||| ||||||||||||| ||||| Sbjct: 221 aacctgctcaagctcttcgagccccgcccgccgctcgacttcaagccgcccgtcgagaag 280 Query: 132 cgcaagttgccggcctacacggggatggcgcagtttgtgtcgcggtttgccgagcctggc 191 |||||||||||||||||||| |||||||||||||| ||||||| |||||| ||||| || Sbjct: 281 cgcaagttgccggcctacactgggatggcgcagttcgtgtcgcagtttgcggagcccggt 340 Query: 192 gacccagagtatgcgccgcctgtcccaacgtgcgagactaaggccgaaaagaaggataga 251 ||||| ||||| ||||| || ||||| || |||||||| ||||| |||||||||||||| Sbjct: 341 gaccctgagtacgcgccacccgtccccacatgcgagaccaaggctgaaaagaaggatagg 400 Query: 252 atcaggaaacttaagcttgagcaaggtgcagataaggtggccaaagagcttcagaactat 311 ||| | ||| ||||||||| |||||||| | ||||||||| ||||||||||||| ||| Sbjct: 401 atccgcaaaagtaagcttgaccaaggtgcggctaaggtggctgaagagcttcagaaatat 460 Query: 312 aacccacaaagtgatcccaataccacttcagatccgtacaaaacactcttcgttgcaaga 371 ||||||| ||||| |||||| ||||| |||||| |||||||||||||| ||||||||| Sbjct: 461 gacccacagagtgaccccaatgccactggagatccatacaaaacactctttgttgcaaga 520 Query: 372 cttaattacgagacatctgagagtagggttaagcgggagtttgaagcctatgggcctatt 431 ||||| || ||||| |||||| |||||| ||||||||||||||||| |||||||||||| Sbjct: 521 cttaactatgagacgtctgagcatagggtcaagcgggagtttgaagcttatgggcctatt 580 Query: 432 aaaagggta 440 ||||||||| Sbjct: 581 aaaagggta 589 Score = 149 bits (75), Expect = 1e-32 Identities = 108/119 (90%) Strand = Plus / Plus Query: 437 ggtacggctcgtaactgacaaggatacgaataaacctagaggatatgcattcatagagta 496 ||||||||| || || |||||||| || |||||||||||||||||||||||||| ||||| Sbjct: 2055 ggtacggcttgtgaccgacaaggaaacaaataaacctagaggatatgcattcatcgagta 2114 Query: 497 tatgcatactcgggatatgaaaaatgcttacaagcaagctgatgggagaaaagtagaca 555 |||||| || ||||| ||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 2115 tatgcacacccgggacatgaaaaatgcttacaagcaagcagatgggagaaaagtggaca 2173
>gb|DQ377063.1| Oryza sativa (japonica cultivar-group) U1 small nuclear ribonucleoprotein 70K splice variant 1 mRNA, complete cds, alternatively spliced Length = 3443 Score = 391 bits (197), Expect = e-105 Identities = 371/429 (86%) Strand = Plus / Plus Query: 12 cgcgccaacgtccagcagctcaagctcatggggcagggccaccctacgggcctcacgccg 71 |||| |||||| |||||||||||||| ||||||||||| ||||| ||||||||||| || Sbjct: 161 cgcgtcaacgtgcagcagctcaagctgatggggcagggacacccgacgggcctcaccccc 220 Query: 72 aacctgctcaagctgttcgaggcgcggcctatgctcgagcacaagccgcccgtccagaag 131 |||||||||||||| |||||| | || || |||||| ||||||||||||| ||||| Sbjct: 221 aacctgctcaagctcttcgagccccgcccgccgctcgacttcaagccgcccgtcgagaag 280 Query: 132 cgcaagttgccggcctacacggggatggcgcagtttgtgtcgcggtttgccgagcctggc 191 |||||||||||||||||||| |||||||||||||| ||||||| |||||| ||||| || Sbjct: 281 cgcaagttgccggcctacactgggatggcgcagttcgtgtcgcagtttgcggagcccggt 340 Query: 192 gacccagagtatgcgccgcctgtcccaacgtgcgagactaaggccgaaaagaaggataga 251 ||||| ||||| ||||| || ||||| || |||||||| ||||| |||||||||||||| Sbjct: 341 gaccctgagtacgcgccacccgtccccacatgcgagaccaaggctgaaaagaaggatagg 400 Query: 252 atcaggaaacttaagcttgagcaaggtgcagataaggtggccaaagagcttcagaactat 311 ||| | ||| ||||||||| |||||||| | ||||||||| ||||||||||||| ||| Sbjct: 401 atccgcaaaagtaagcttgaccaaggtgcggctaaggtggctgaagagcttcagaaatat 460 Query: 312 aacccacaaagtgatcccaataccacttcagatccgtacaaaacactcttcgttgcaaga 371 ||||||| ||||| |||||| ||||| |||||| |||||||||||||| ||||||||| Sbjct: 461 gacccacagagtgaccccaatgccactggagatccatacaaaacactctttgttgcaaga 520 Query: 372 cttaattacgagacatctgagagtagggttaagcgggagtttgaagcctatgggcctatt 431 ||||| || ||||| |||||| |||||| ||||||||||||||||| |||||||||||| Sbjct: 521 cttaactatgagacgtctgagcatagggtcaagcgggagtttgaagcttatgggcctatt 580 Query: 432 aaaagggta 440 ||||||||| Sbjct: 581 aaaagggta 589 Score = 149 bits (75), Expect = 1e-32 Identities = 108/119 (90%) Strand = Plus / Plus Query: 437 ggtacggctcgtaactgacaaggatacgaataaacctagaggatatgcattcatagagta 496 ||||||||| || || |||||||| || |||||||||||||||||||||||||| ||||| Sbjct: 2214 ggtacggcttgtgaccgacaaggaaacaaataaacctagaggatatgcattcatcgagta 2273 Query: 497 tatgcatactcgggatatgaaaaatgcttacaagcaagctgatgggagaaaagtagaca 555 |||||| || ||||| ||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 2274 tatgcacacccgggacatgaaaaatgcttacaagcaagcagatgggagaaaagtggaca 2332
>dbj|AK100686.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023113P16, full insert sequence Length = 3436 Score = 391 bits (197), Expect = e-105 Identities = 371/429 (86%) Strand = Plus / Plus Query: 12 cgcgccaacgtccagcagctcaagctcatggggcagggccaccctacgggcctcacgccg 71 |||| |||||| |||||||||||||| ||||||||||| ||||| ||||||||||| || Sbjct: 172 cgcgtcaacgtgcagcagctcaagctgatggggcagggacacccgacgggcctcaccccc 231 Query: 72 aacctgctcaagctgttcgaggcgcggcctatgctcgagcacaagccgcccgtccagaag 131 |||||||||||||| |||||| | || || |||||| ||||||||||||| ||||| Sbjct: 232 aacctgctcaagctcttcgagccccgcccgccgctcgacttcaagccgcccgtcgagaag 291 Query: 132 cgcaagttgccggcctacacggggatggcgcagtttgtgtcgcggtttgccgagcctggc 191 |||||||||||||||||||| |||||||||||||| ||||||| |||||| ||||| || Sbjct: 292 cgcaagttgccggcctacactgggatggcgcagttcgtgtcgcagtttgcggagcccggt 351 Query: 192 gacccagagtatgcgccgcctgtcccaacgtgcgagactaaggccgaaaagaaggataga 251 ||||| ||||| ||||| || ||||| || |||||||| ||||| |||||||||||||| Sbjct: 352 gaccctgagtacgcgccacccgtccccacatgcgagaccaaggctgaaaagaaggatagg 411 Query: 252 atcaggaaacttaagcttgagcaaggtgcagataaggtggccaaagagcttcagaactat 311 ||| | ||| ||||||||| |||||||| | ||||||||| ||||||||||||| ||| Sbjct: 412 atccgcaaaagtaagcttgaccaaggtgcggctaaggtggctgaagagcttcagaaatat 471 Query: 312 aacccacaaagtgatcccaataccacttcagatccgtacaaaacactcttcgttgcaaga 371 ||||||| ||||| |||||| ||||| |||||| |||||||||||||| ||||||||| Sbjct: 472 gacccacagagtgaccccaatgccactggagatccatacaaaacactctttgttgcaaga 531 Query: 372 cttaattacgagacatctgagagtagggttaagcgggagtttgaagcctatgggcctatt 431 ||||| || ||||| |||||| |||||| ||||||||||||||||| |||||||||||| Sbjct: 532 cttaactatgagacgtctgagcatagggtcaagcgggagtttgaagcttatgggcctatt 591 Query: 432 aaaagggta 440 ||||||||| Sbjct: 592 aaaagggta 600 Score = 149 bits (75), Expect = 1e-32 Identities = 108/119 (90%) Strand = Plus / Plus Query: 437 ggtacggctcgtaactgacaaggatacgaataaacctagaggatatgcattcatagagta 496 ||||||||| || || |||||||| || |||||||||||||||||||||||||| ||||| Sbjct: 2225 ggtacggcttgtgaccgacaaggaaacaaataaacctagaggatatgcattcatcgagta 2284 Query: 497 tatgcatactcgggatatgaaaaatgcttacaagcaagctgatgggagaaaagtagaca 555 |||||| || ||||| ||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 2285 tatgcacacccgggacatgaaaaatgcttacaagcaagcagatgggagaaaagtggaca 2343
>ref|NM_194601.1| Oryza sativa (japonica cultivar-group) putative U1 small nuclear ribonucleoprotein (OSJNBa0092N12.2), mRNA Length = 1476 Score = 385 bits (194), Expect = e-103 Identities = 368/426 (86%) Strand = Plus / Plus Query: 12 cgcgccaacgtccagcagctcaagctcatggggcagggccaccctacgggcctcacgccg 71 |||| |||||| |||||||||||||| ||||||||||| ||||| ||||||||||| || Sbjct: 76 cgcgtcaacgtgcagcagctcaagctgatggggcagggacacccgacgggcctcaccccc 135 Query: 72 aacctgctcaagctgttcgaggcgcggcctatgctcgagcacaagccgcccgtccagaag 131 |||||||||||||| |||||| | || || |||||| ||||||||||||| ||||| Sbjct: 136 aacctgctcaagctcttcgagccccgcccgccgctcgacttcaagccgcccgtcgagaag 195 Query: 132 cgcaagttgccggcctacacggggatggcgcagtttgtgtcgcggtttgccgagcctggc 191 |||||||||||||||||||| |||||||||||||| ||||||| |||||| ||||| || Sbjct: 196 cgcaagttgccggcctacactgggatggcgcagttcgtgtcgcagtttgcggagcccggt 255 Query: 192 gacccagagtatgcgccgcctgtcccaacgtgcgagactaaggccgaaaagaaggataga 251 ||||| ||||| ||||| || ||||| || |||||||| ||||| |||||||||||||| Sbjct: 256 gaccctgagtacgcgccacccgtccccacatgcgagaccaaggctgaaaagaaggatagg 315 Query: 252 atcaggaaacttaagcttgagcaaggtgcagataaggtggccaaagagcttcagaactat 311 ||| | ||| ||||||||| |||||||| | ||||||||| ||||||||||||| ||| Sbjct: 316 atccgcaaaagtaagcttgaccaaggtgcggctaaggtggctgaagagcttcagaaatat 375 Query: 312 aacccacaaagtgatcccaataccacttcagatccgtacaaaacactcttcgttgcaaga 371 ||||||| ||||| |||||| ||||| |||||| |||||||||||||| ||||||||| Sbjct: 376 gacccacagagtgaccccaatgccactggagatccatacaaaacactctttgttgcaaga 435 Query: 372 cttaattacgagacatctgagagtagggttaagcgggagtttgaagcctatgggcctatt 431 ||||| || ||||| |||||| |||||| ||||||||||||||||| |||||||||||| Sbjct: 436 cttaactatgagacgtctgagcatagggtcaagcgggagtttgaagcttatgggcctatt 495 Query: 432 aaaagg 437 |||||| Sbjct: 496 aaaagg 501 Score = 149 bits (75), Expect = 1e-32 Identities = 108/119 (90%) Strand = Plus / Plus Query: 437 ggtacggctcgtaactgacaaggatacgaataaacctagaggatatgcattcatagagta 496 ||||||||| || || |||||||| || |||||||||||||||||||||||||| ||||| Sbjct: 585 ggtacggcttgtgaccgacaaggaaacaaataaacctagaggatatgcattcatcgagta 644 Query: 497 tatgcatactcgggatatgaaaaatgcttacaagcaagctgatgggagaaaagtagaca 555 |||||| || ||||| ||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 645 tatgcacacccgggacatgaaaaatgcttacaagcaagcagatgggagaaaagtggaca 703
>gb|AY627766.1| Zea mays U1 snRNP mRNA, complete cds; alternatively spliced Length = 1647 Score = 307 bits (155), Expect = 2e-80 Identities = 445/539 (82%), Gaps = 2/539 (0%) Strand = Plus / Plus Query: 18 aacgtccagcagctcaagctcatggggcagggccaccctacgggcctcacgccgaacctg 77 |||||||||||||||||||||||||||||| |||||| ||||| |||||||| |||||| Sbjct: 128 aacgtccagcagctcaagctcatggggcagatccacccgacggggctcacgcccaacctg 187 Query: 78 ctcaagctgttcgaggcgcggcctatgctcgagcacaagccgcccgtccagaagcgcaag 137 || ||||| ||||| |||| || ||||||| ||||||| || | |||||||||| Sbjct: 188 cttaagctcttcgaaccgcgtccaccgctcgagtacaagcccccgctggagaagcgcaaa 247 Query: 138 ttgccggcctacacggggatggcgcagtttgtgtcgcggtttgccgagcctggcgaccca 197 |||||||||||||| ||||||||||| |||||||| | ||||| ||||| | || ||| Sbjct: 248 ttgccggcctacaccgggatggcgcaatttgtgtctcactttgctgagcccgaggatcca 307 Query: 198 gagtatgcgccgcctgtcccaacgtgcgagactaaggccgaaaagaaggatagaatcagg 257 |||||||| ||||| || || | ||| ||||| | ||| || ||||||| |||||| | Sbjct: 308 gagtatgctccgccagtacccaagtgtgagaccagggcagagaagaaggctagaattcgc 367 Query: 258 aaacttaagcttgagcaaggtgcagataaggtggccaaagagcttcagaactataaccca 317 || |||||| |||||||| |||| |||||| || ||||||||||||| ||| ||||| Sbjct: 368 aataataagctcgagcaaggcgcagctaaggttgctgaagagcttcagaagtatgaccca 427 Query: 318 caaagtgatcccaataccacttcagatccgtacaaaacactcttcgttgcaagacttaat 377 |||||||| |||||| | ||| |||||| |||||||||||||| ||||| |||||||| Sbjct: 428 caaagtgaccccaatgctactggagatccatacaaaacactctttgttgctagacttaac 487 Query: 378 tacgagacatctgagagtagggttaagcgggagtttgaagcctatgggcctattaaaagg 437 || |||||||||||| ||| | || || |||||||||| ||||| |||||||||||| Sbjct: 488 tatgagacatctgagcagaggatcaaacgcgagtttgaaggttatggtcctattaaaagg 547 Query: 438 gtacggctcgtaactgacaaggatacgaataaacctagaggatatgcattcatagagtat 497 || || || |||||||| || ||||| | |||||||||||||||||||||||| |||||| Sbjct: 548 gttcgtcttgtaactgagaaagataccagtaaacctagaggatatgcattcattgagtat 607 Query: 498 atgcatactcgggatatgaaaaatgctta-caagcaagctgatgggagaaaagtagaca 555 |||| || || || ||||||||||| || | ||| ||| |||||||||||||| |||| Sbjct: 608 gtgcacacacgagacatgaaaaatgcctacccagc-agcagatgggagaaaagtggaca 665
>gb|AY627768.1| Zea mays U1 snRNP mRNA, complete cds; alternatively spliced Length = 3299 Score = 244 bits (123), Expect = 3e-61 Identities = 348/423 (82%) Strand = Plus / Plus Query: 18 aacgtccagcagctcaagctcatggggcagggccaccctacgggcctcacgccgaacctg 77 |||||||||||||||||||||||||||||| |||||| ||||| |||||||| |||||| Sbjct: 128 aacgtccagcagctcaagctcatggggcagatccacccgacggggctcacgcccaacctg 187 Query: 78 ctcaagctgttcgaggcgcggcctatgctcgagcacaagccgcccgtccagaagcgcaag 137 || ||||| ||||| |||| || ||||||| ||||||| || | |||||||||| Sbjct: 188 cttaagctcttcgaaccgcgtccaccgctcgagtacaagcccccgctggagaagcgcaaa 247 Query: 138 ttgccggcctacacggggatggcgcagtttgtgtcgcggtttgccgagcctggcgaccca 197 |||||||||||||| ||||||||||| |||||||| | ||||| ||||| | || ||| Sbjct: 248 ttgccggcctacaccgggatggcgcaatttgtgtctcactttgctgagcccgaggatcca 307 Query: 198 gagtatgcgccgcctgtcccaacgtgcgagactaaggccgaaaagaaggatagaatcagg 257 |||||||| ||||| || || | ||| ||||| | ||| || ||||||| |||||| | Sbjct: 308 gagtatgctccgccagtacccaagtgtgagaccagggcagagaagaaggctagaattcgc 367 Query: 258 aaacttaagcttgagcaaggtgcagataaggtggccaaagagcttcagaactataaccca 317 || |||||| |||||||| |||| |||||| || ||||||||||||| ||| ||||| Sbjct: 368 aataataagctcgagcaaggcgcagctaaggttgctgaagagcttcagaagtatgaccca 427 Query: 318 caaagtgatcccaataccacttcagatccgtacaaaacactcttcgttgcaagacttaat 377 |||||||| |||||| | ||| |||||| |||||||||||||| ||||| |||||||| Sbjct: 428 caaagtgaccccaatgctactggagatccatacaaaacactctttgttgctagacttaac 487 Query: 378 tacgagacatctgagagtagggttaagcgggagtttgaagcctatgggcctattaaaagg 437 || |||||||||||| ||| | || || |||||||||| ||||| |||||||||||| Sbjct: 488 tatgagacatctgagcagaggatcaaacgcgagtttgaaggttatggtcctattaaaagg 547 Query: 438 gta 440 ||| Sbjct: 548 gta 550 Score = 75.8 bits (38), Expect = 1e-10 Identities = 94/110 (85%), Gaps = 2/110 (1%) Strand = Plus / Plus Query: 447 gtaactgacaaggatacgaataaacctagaggatatgcattcatagagtatatgcatact 506 |||||||| || ||||| | |||||||||||||||||||||||| |||||| |||| || Sbjct: 2209 gtaactgagaaagataccagtaaacctagaggatatgcattcattgagtatgtgcacaca 2268 Query: 507 cgggatatgaaaaatgctta-caagcaagctgatgggagaaaagtagaca 555 || || ||||||||||| || | ||| ||| |||||||||||||| |||| Sbjct: 2269 cgagacatgaaaaatgcctacccagc-agcagatgggagaaaagtggaca 2317
>gb|AY627767.1| Zea mays U1 snRNP mRNA, complete cds; alternatively spliced Length = 3463 Score = 244 bits (123), Expect = 3e-61 Identities = 348/423 (82%) Strand = Plus / Plus Query: 18 aacgtccagcagctcaagctcatggggcagggccaccctacgggcctcacgccgaacctg 77 |||||||||||||||||||||||||||||| |||||| ||||| |||||||| |||||| Sbjct: 128 aacgtccagcagctcaagctcatggggcagatccacccgacggggctcacgcccaacctg 187 Query: 78 ctcaagctgttcgaggcgcggcctatgctcgagcacaagccgcccgtccagaagcgcaag 137 || ||||| ||||| |||| || ||||||| ||||||| || | |||||||||| Sbjct: 188 cttaagctcttcgaaccgcgtccaccgctcgagtacaagcccccgctggagaagcgcaaa 247 Query: 138 ttgccggcctacacggggatggcgcagtttgtgtcgcggtttgccgagcctggcgaccca 197 |||||||||||||| ||||||||||| |||||||| | ||||| ||||| | || ||| Sbjct: 248 ttgccggcctacaccgggatggcgcaatttgtgtctcactttgctgagcccgaggatcca 307 Query: 198 gagtatgcgccgcctgtcccaacgtgcgagactaaggccgaaaagaaggatagaatcagg 257 |||||||| ||||| || || | ||| ||||| | ||| || ||||||| |||||| | Sbjct: 308 gagtatgctccgccagtacccaagtgtgagaccagggcagagaagaaggctagaattcgc 367 Query: 258 aaacttaagcttgagcaaggtgcagataaggtggccaaagagcttcagaactataaccca 317 || |||||| |||||||| |||| |||||| || ||||||||||||| ||| ||||| Sbjct: 368 aataataagctcgagcaaggcgcagctaaggttgctgaagagcttcagaagtatgaccca 427 Query: 318 caaagtgatcccaataccacttcagatccgtacaaaacactcttcgttgcaagacttaat 377 |||||||| |||||| | ||| |||||| |||||||||||||| ||||| |||||||| Sbjct: 428 caaagtgaccccaatgctactggagatccatacaaaacactctttgttgctagacttaac 487 Query: 378 tacgagacatctgagagtagggttaagcgggagtttgaagcctatgggcctattaaaagg 437 || |||||||||||| ||| | || || |||||||||| ||||| |||||||||||| Sbjct: 488 tatgagacatctgagcagaggatcaaacgcgagtttgaaggttatggtcctattaaaagg 547 Query: 438 gta 440 ||| Sbjct: 548 gta 550 Score = 75.8 bits (38), Expect = 1e-10 Identities = 94/110 (85%), Gaps = 2/110 (1%) Strand = Plus / Plus Query: 447 gtaactgacaaggatacgaataaacctagaggatatgcattcatagagtatatgcatact 506 |||||||| || ||||| | |||||||||||||||||||||||| |||||| |||| || Sbjct: 2373 gtaactgagaaagataccagtaaacctagaggatatgcattcattgagtatgtgcacaca 2432 Query: 507 cgggatatgaaaaatgctta-caagcaagctgatgggagaaaagtagaca 555 || || ||||||||||| || | ||| ||| |||||||||||||| |||| Sbjct: 2433 cgagacatgaaaaatgcctacccagc-agcagatgggagaaaagtggaca 2481
>gb|AY108570.1| Zea mays PCO063456 mRNA sequence Length = 1603 Score = 113 bits (57), Expect = 6e-22 Identities = 96/109 (88%) Strand = Plus / Plus Query: 447 gtaactgacaaggatacgaataaacctagaggatatgcattcatagagtatatgcatact 506 |||||||| || ||||| | |||||||||||||||||||||||| |||||| |||| || Sbjct: 275 gtaactgagaaagatacaagtaaacctagaggatatgcattcattgagtatgtgcacaca 334 Query: 507 cgggatatgaaaaatgcttacaagcaagctgatgggagaaaagtagaca 555 || || ||||||||||| ||||||||||| |||||||||||||| |||| Sbjct: 335 cgagacatgaaaaatgcctacaagcaagcagatgggagaaaagtggaca 383
>gb|AC078891.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0092N12, complete sequence Length = 109198 Score = 105 bits (53), Expect = 2e-19 Identities = 98/113 (86%) Strand = Plus / Plus Query: 39 atggggcagggccaccctacgggcctcacgccgaacctgctcaagctgttcgaggcgcgg 98 ||||||||||| ||||| ||||||||||| || |||||||||||||| |||||| | || Sbjct: 10926 atggggcagggacacccgacgggcctcacccccaacctgctcaagctcttcgagccccgc 10985 Query: 99 cctatgctcgagcacaagccgcccgtccagaagcgcaagttgccggcctacac 151 || |||||| ||||||||||||| ||||||||||||||||||||||||| Sbjct: 10986 ccgccgctcgacttcaagccgcccgtcgagaagcgcaagttgccggcctacac 11038 Score = 93.7 bits (47), Expect = 6e-16 Identities = 74/83 (89%) Strand = Plus / Plus Query: 437 ggtacggctcgtaactgacaaggatacgaataaacctagaggatatgcattcatagagta 496 ||||||||| || || |||||||| || |||||||||||||||||||||||||| ||||| Sbjct: 14005 ggtacggcttgtgaccgacaaggaaacaaataaacctagaggatatgcattcatcgagta 14064 Query: 497 tatgcatactcgggatatgaaaa 519 |||||| || ||||| ||||||| Sbjct: 14065 tatgcacacccgggacatgaaaa 14087 Score = 79.8 bits (40), Expect = 9e-12 Identities = 55/60 (91%) Strand = Plus / Plus Query: 381 gagacatctgagagtagggttaagcgggagtttgaagcctatgggcctattaaaagggta 440 ||||| |||||| |||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 12321 gagacgtctgagcatagggtcaagcgggagtttgaagcttatgggcctattaaaagggta 12380 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 313 acccacaaagtgatcccaataccacttcagatccgtacaaaacactcttcgttgcaagac 372 ||||||| ||||| |||||| ||||| |||||| |||||||||||||| |||||||||| Sbjct: 12154 acccacagagtgaccccaatgccactggagatccatacaaaacactctttgttgcaagac 12213 Query: 373 tt 374 || Sbjct: 12214 tt 12215 Score = 67.9 bits (34), Expect = 3e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 153 gggatggcgcagtttgtgtcgcggtttgccgagcctggcgacccagagtatgcgccgcct 212 |||||||||||||| ||||||| |||||| ||||| || ||||| ||||| ||||| || Sbjct: 11200 gggatggcgcagttcgtgtcgcagtttgcggagcccggtgaccctgagtacgcgccaccc 11259 Query: 213 gtcccaacgtgcgagactaagg 234 ||||| || |||||||| |||| Sbjct: 11260 gtccccacatgcgagaccaagg 11281 Score = 63.9 bits (32), Expect = 5e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 232 aggccgaaaagaaggatagaatcaggaaacttaagcttgagcaaggtgcagataaggtgg 291 |||| |||||||||||||| ||| | ||| ||||||||| |||||||| | |||||||| Sbjct: 11992 aggctgaaaagaaggataggatccgcaaaagtaagcttgaccaaggtgcggctaaggtgg 12051 Query: 292 ccaaagagcttcagaa 307 | ||||||||||||| Sbjct: 12052 ctgaagagcttcagaa 12067 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 520 atgcttacaagcaagctgatgggagaaaagtagaca 555 |||||||||||||||| |||||||||||||| |||| Sbjct: 14191 atgcttacaagcaagcagatgggagaaaagtggaca 14226
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 105 bits (53), Expect = 2e-19 Identities = 98/113 (86%) Strand = Plus / Minus Query: 39 atggggcagggccaccctacgggcctcacgccgaacctgctcaagctgttcgaggcgcgg 98 ||||||||||| ||||| ||||||||||| || |||||||||||||| |||||| | || Sbjct: 991628 atggggcagggacacccgacgggcctcacccccaacctgctcaagctcttcgagccccgc 991569 Query: 99 cctatgctcgagcacaagccgcccgtccagaagcgcaagttgccggcctacac 151 || |||||| ||||||||||||| ||||||||||||||||||||||||| Sbjct: 991568 ccgccgctcgacttcaagccgcccgtcgagaagcgcaagttgccggcctacac 991516 Score = 93.7 bits (47), Expect = 6e-16 Identities = 74/83 (89%) Strand = Plus / Minus Query: 437 ggtacggctcgtaactgacaaggatacgaataaacctagaggatatgcattcatagagta 496 ||||||||| || || |||||||| || |||||||||||||||||||||||||| ||||| Sbjct: 988549 ggtacggcttgtgaccgacaaggaaacaaataaacctagaggatatgcattcatcgagta 988490 Query: 497 tatgcatactcgggatatgaaaa 519 |||||| || ||||| ||||||| Sbjct: 988489 tatgcacacccgggacatgaaaa 988467 Score = 79.8 bits (40), Expect = 9e-12 Identities = 55/60 (91%) Strand = Plus / Minus Query: 381 gagacatctgagagtagggttaagcgggagtttgaagcctatgggcctattaaaagggta 440 ||||| |||||| |||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 990233 gagacgtctgagcatagggtcaagcgggagtttgaagcttatgggcctattaaaagggta 990174 Score = 67.9 bits (34), Expect = 3e-08 Identities = 70/82 (85%) Strand = Plus / Minus Query: 153 gggatggcgcagtttgtgtcgcggtttgccgagcctggcgacccagagtatgcgccgcct 212 |||||||||||||| ||||||| |||||| ||||| || ||||| ||||| ||||| || Sbjct: 991354 gggatggcgcagttcgtgtcgcagtttgcggagcccggtgaccctgagtacgcgccaccc 991295 Query: 213 gtcccaacgtgcgagactaagg 234 ||||| || |||||||| |||| Sbjct: 991294 gtccccacatgcgagaccaagg 991273 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 313 acccacaaagtgatcccaataccacttcagatccgtacaaaacactcttcgttgcaagac 372 ||||||| ||||| |||||| ||||| |||||| |||||||||||||| |||||||||| Sbjct: 990400 acccacagagtgaccccaatgccactggagatccatacaaaacactctttgttgcaagac 990341 Query: 373 tt 374 || Sbjct: 990340 tt 990339 Score = 63.9 bits (32), Expect = 5e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 232 aggccgaaaagaaggatagaatcaggaaacttaagcttgagcaaggtgcagataaggtgg 291 |||| |||||||||||||| ||| | ||| ||||||||| |||||||| | |||||||| Sbjct: 990562 aggctgaaaagaaggataggatccgcaaaagtaagcttgaccaaggtgcggctaaggtgg 990503 Query: 292 ccaaagagcttcagaa 307 | ||||||||||||| Sbjct: 990502 ctgaagagcttcagaa 990487 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 520 atgcttacaagcaagctgatgggagaaaagtagaca 555 |||||||||||||||| |||||||||||||| |||| Sbjct: 988363 atgcttacaagcaagcagatgggagaaaagtggaca 988328
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 105 bits (53), Expect = 2e-19 Identities = 98/113 (86%) Strand = Plus / Minus Query: 39 atggggcagggccaccctacgggcctcacgccgaacctgctcaagctgttcgaggcgcgg 98 ||||||||||| ||||| ||||||||||| || |||||||||||||| |||||| | || Sbjct: 991628 atggggcagggacacccgacgggcctcacccccaacctgctcaagctcttcgagccccgc 991569 Query: 99 cctatgctcgagcacaagccgcccgtccagaagcgcaagttgccggcctacac 151 || |||||| ||||||||||||| ||||||||||||||||||||||||| Sbjct: 991568 ccgccgctcgacttcaagccgcccgtcgagaagcgcaagttgccggcctacac 991516 Score = 93.7 bits (47), Expect = 6e-16 Identities = 74/83 (89%) Strand = Plus / Minus Query: 437 ggtacggctcgtaactgacaaggatacgaataaacctagaggatatgcattcatagagta 496 ||||||||| || || |||||||| || |||||||||||||||||||||||||| ||||| Sbjct: 988549 ggtacggcttgtgaccgacaaggaaacaaataaacctagaggatatgcattcatcgagta 988490 Query: 497 tatgcatactcgggatatgaaaa 519 |||||| || ||||| ||||||| Sbjct: 988489 tatgcacacccgggacatgaaaa 988467 Score = 79.8 bits (40), Expect = 9e-12 Identities = 55/60 (91%) Strand = Plus / Minus Query: 381 gagacatctgagagtagggttaagcgggagtttgaagcctatgggcctattaaaagggta 440 ||||| |||||| |||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 990233 gagacgtctgagcatagggtcaagcgggagtttgaagcttatgggcctattaaaagggta 990174 Score = 67.9 bits (34), Expect = 3e-08 Identities = 70/82 (85%) Strand = Plus / Minus Query: 153 gggatggcgcagtttgtgtcgcggtttgccgagcctggcgacccagagtatgcgccgcct 212 |||||||||||||| ||||||| |||||| ||||| || ||||| ||||| ||||| || Sbjct: 991354 gggatggcgcagttcgtgtcgcagtttgcggagcccggtgaccctgagtacgcgccaccc 991295 Query: 213 gtcccaacgtgcgagactaagg 234 ||||| || |||||||| |||| Sbjct: 991294 gtccccacatgcgagaccaagg 991273 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 313 acccacaaagtgatcccaataccacttcagatccgtacaaaacactcttcgttgcaagac 372 ||||||| ||||| |||||| ||||| |||||| |||||||||||||| |||||||||| Sbjct: 990400 acccacagagtgaccccaatgccactggagatccatacaaaacactctttgttgcaagac 990341 Query: 373 tt 374 || Sbjct: 990340 tt 990339 Score = 63.9 bits (32), Expect = 5e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 232 aggccgaaaagaaggatagaatcaggaaacttaagcttgagcaaggtgcagataaggtgg 291 |||| |||||||||||||| ||| | ||| ||||||||| |||||||| | |||||||| Sbjct: 990562 aggctgaaaagaaggataggatccgcaaaagtaagcttgaccaaggtgcggctaaggtgg 990503 Query: 292 ccaaagagcttcagaa 307 | ||||||||||||| Sbjct: 990502 ctgaagagcttcagaa 990487 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 520 atgcttacaagcaagctgatgggagaaaagtagaca 555 |||||||||||||||| |||||||||||||| |||| Sbjct: 988363 atgcttacaagcaagcagatgggagaaaagtggaca 988328
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 105 bits (53), Expect = 2e-19 Identities = 98/113 (86%) Strand = Plus / Minus Query: 39 atggggcagggccaccctacgggcctcacgccgaacctgctcaagctgttcgaggcgcgg 98 ||||||||||| ||||| ||||||||||| || |||||||||||||| |||||| | || Sbjct: 991625 atggggcagggacacccgacgggcctcacccccaacctgctcaagctcttcgagccccgc 991566 Query: 99 cctatgctcgagcacaagccgcccgtccagaagcgcaagttgccggcctacac 151 || |||||| ||||||||||||| ||||||||||||||||||||||||| Sbjct: 991565 ccgccgctcgacttcaagccgcccgtcgagaagcgcaagttgccggcctacac 991513 Score = 93.7 bits (47), Expect = 6e-16 Identities = 74/83 (89%) Strand = Plus / Minus Query: 437 ggtacggctcgtaactgacaaggatacgaataaacctagaggatatgcattcatagagta 496 ||||||||| || || |||||||| || |||||||||||||||||||||||||| ||||| Sbjct: 988546 ggtacggcttgtgaccgacaaggaaacaaataaacctagaggatatgcattcatcgagta 988487 Query: 497 tatgcatactcgggatatgaaaa 519 |||||| || ||||| ||||||| Sbjct: 988486 tatgcacacccgggacatgaaaa 988464 Score = 79.8 bits (40), Expect = 9e-12 Identities = 55/60 (91%) Strand = Plus / Minus Query: 381 gagacatctgagagtagggttaagcgggagtttgaagcctatgggcctattaaaagggta 440 ||||| |||||| |||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 990230 gagacgtctgagcatagggtcaagcgggagtttgaagcttatgggcctattaaaagggta 990171 Score = 67.9 bits (34), Expect = 3e-08 Identities = 70/82 (85%) Strand = Plus / Minus Query: 153 gggatggcgcagtttgtgtcgcggtttgccgagcctggcgacccagagtatgcgccgcct 212 |||||||||||||| ||||||| |||||| ||||| || ||||| ||||| ||||| || Sbjct: 991351 gggatggcgcagttcgtgtcgcagtttgcggagcccggtgaccctgagtacgcgccaccc 991292 Query: 213 gtcccaacgtgcgagactaagg 234 ||||| || |||||||| |||| Sbjct: 991291 gtccccacatgcgagaccaagg 991270 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 313 acccacaaagtgatcccaataccacttcagatccgtacaaaacactcttcgttgcaagac 372 ||||||| ||||| |||||| ||||| |||||| |||||||||||||| |||||||||| Sbjct: 990397 acccacagagtgaccccaatgccactggagatccatacaaaacactctttgttgcaagac 990338 Query: 373 tt 374 || Sbjct: 990337 tt 990336 Score = 63.9 bits (32), Expect = 5e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 232 aggccgaaaagaaggatagaatcaggaaacttaagcttgagcaaggtgcagataaggtgg 291 |||| |||||||||||||| ||| | ||| ||||||||| |||||||| | |||||||| Sbjct: 990559 aggctgaaaagaaggataggatccgcaaaagtaagcttgaccaaggtgcggctaaggtgg 990500 Query: 292 ccaaagagcttcagaa 307 | ||||||||||||| Sbjct: 990499 ctgaagagcttcagaa 990484 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 520 atgcttacaagcaagctgatgggagaaaagtagaca 555 |||||||||||||||| |||||||||||||| |||| Sbjct: 988360 atgcttacaagcaagcagatgggagaaaagtggaca 988325
>gb|AY627765.1| Zea mays U1 snRNP gene, complete cds; alternatively spliced Length = 5550 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 447 gtaactgacaaggatacgaataaacctagaggatatgcattcatagagtatatgcatact 506 |||||||| || ||||| | |||||||||||||||||||||||| |||||| |||| || Sbjct: 3329 gtaactgagaaagataccagtaaacctagaggatatgcattcattgagtatgtgcacaca 3388 Query: 507 cgggatatgaaaa 519 || || ||||||| Sbjct: 3389 cgagacatgaaaa 3401 Score = 65.9 bits (33), Expect = 1e-07 Identities = 93/113 (82%) Strand = Plus / Plus Query: 39 atggggcagggccaccctacgggcctcacgccgaacctgctcaagctgttcgaggcgcgg 98 ||||||||| |||||| ||||| |||||||| |||||||| ||||| ||||| |||| Sbjct: 275 atggggcagatccacccgacggggctcacgcccaacctgcttaagctcttcgaaccgcgt 334 Query: 99 cctatgctcgagcacaagccgcccgtccagaagcgcaagttgccggcctacac 151 || ||||||| ||||||| || | |||||||||| |||||||||||||| Sbjct: 335 ccaccgctcgagtacaagcccccgctggagaagcgcaaattgccggcctacac 387 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 313 acccacaaagtgatcccaataccacttcagatccgtacaaaacactcttcgttgcaagac 372 ||||||||||||| |||||| | ||| |||||| |||||||||||||| ||||| |||| Sbjct: 1260 acccacaaagtgaccccaatgctactggagatccatacaaaacactctttgttgctagac 1319 Query: 373 tt 374 || Sbjct: 1320 tt 1321 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 408 gagtttgaagcctatgggcctattaaaagggta 440 |||||||||| ||||| ||||||||||||||| Sbjct: 1474 gagtttgaaggttatggtcctattaaaagggta 1506 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Plus Query: 263 taagcttgagcaaggtgcagataaggtggccaaagagcttcagaa 307 |||||| |||||||| |||| |||||| || ||||||||||||| Sbjct: 1125 taagctcgagcaaggcgcagctaaggttgctgaagagcttcagaa 1169 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 aacgtccagcagctcaagctc 38 ||||||||||||||||||||| Sbjct: 160 aacgtccagcagctcaagctc 180
>ref|NM_180345.1| Arabidopsis thaliana U1-70K (SPLICEOSOMAL PROTEIN U1A); RNA binding AT3G50670 (U1-70K) transcript variant AT3G50670.2 mRNA, complete cds Length = 2424 Score = 50.1 bits (25), Expect = 0.008 Identities = 64/77 (83%) Strand = Plus / Plus Query: 465 aataaacctagaggatatgcattcatagagtatatgcatactcgggatatgaaaaatgct 524 |||||||| | ||||||||| ||||| ||||| ||||| || || || |||||| ||| Sbjct: 1519 aataaacccaaaggatatgctttcattgagtacatgcacacccgtgacatgaaagctgca 1578 Query: 525 tacaagcaagctgatgg 541 || |||||||||||||| Sbjct: 1579 tataagcaagctgatgg 1595 Score = 48.1 bits (24), Expect = 0.031 Identities = 81/100 (81%) Strand = Plus / Plus Query: 341 agatccgtacaaaacactcttcgttgcaagacttaattacgagacatctgagagtagggt 400 |||||| ||||| ||| | |||||| |||||||||| ||||| | || ||||||| | | Sbjct: 486 agatccatacaagacattgttcgtttcaagacttaactacgaatcctcagagagtaagat 545 Query: 401 taagcgggagtttgaagcctatgggcctattaaaagggta 440 ||| ||||||||||| | ||||| || |||||| ||||| Sbjct: 546 taaaagggagtttgaatcttatggaccaattaaacgggta 585
>ref|NM_114927.2| Arabidopsis thaliana U1-70K (SPLICEOSOMAL PROTEIN U1A); RNA binding / nucleic acid binding AT3G50670 (U1-70K) transcript variant AT3G50670.1 mRNA, complete cds Length = 1555 Score = 50.1 bits (25), Expect = 0.008 Identities = 157/201 (78%) Strand = Plus / Plus Query: 341 agatccgtacaaaacactcttcgttgcaagacttaattacgagacatctgagagtagggt 400 |||||| ||||| ||| | |||||| |||||||||| ||||| | || ||||||| | | Sbjct: 497 agatccatacaagacattgttcgtttcaagacttaactacgaatcctcagagagtaagat 556 Query: 401 taagcgggagtttgaagcctatgggcctattaaaagggtacggctcgtaactgacaagga 460 ||| ||||||||||| | ||||| || |||||| |||| | | || ||||| || Sbjct: 557 taaaagggagtttgaatcttatggaccaattaaacgggttcatttggtgactgatcagct 616 Query: 461 tacgaataaacctagaggatatgcattcatagagtatatgcatactcgggatatgaaaaa 520 || |||||||| | ||||||||| ||||| ||||| ||||| || || || |||||| Sbjct: 617 gaccaataaacccaaaggatatgctttcattgagtacatgcacacccgtgacatgaaagc 676 Query: 521 tgcttacaagcaagctgatgg 541 ||| || |||||||||||||| Sbjct: 677 tgcatataagcaagctgatgg 697
>gb|AY094003.1| Arabidopsis thaliana AT3g50670/T3A5_50 mRNA, complete cds Length = 1284 Score = 50.1 bits (25), Expect = 0.008 Identities = 157/201 (78%) Strand = Plus / Plus Query: 341 agatccgtacaaaacactcttcgttgcaagacttaattacgagacatctgagagtagggt 400 |||||| ||||| ||| | |||||| |||||||||| ||||| | || ||||||| | | Sbjct: 402 agatccatacaagacattgttcgtttcaagacttaactacgaatcctcagagagtaagat 461 Query: 401 taagcgggagtttgaagcctatgggcctattaaaagggtacggctcgtaactgacaagga 460 ||| ||||||||||| | ||||| || |||||| |||| | | || ||||| || Sbjct: 462 taaaagggagtttgaatcttatggaccaattaaacgggttcatttggtgactgatcagct 521 Query: 461 tacgaataaacctagaggatatgcattcatagagtatatgcatactcgggatatgaaaaa 520 || |||||||| | ||||||||| ||||| ||||| ||||| || || || |||||| Sbjct: 522 gaccaataaacccaaaggatatgctttcattgagtacatgcacacccgtgacatgaaagc 581 Query: 521 tgcttacaagcaagctgatgg 541 ||| || |||||||||||||| Sbjct: 582 tgcatataagcaagctgatgg 602
>gb|AY039874.1| Arabidopsis thaliana AT3g50670/T3A5_50 mRNA, complete cds Length = 1483 Score = 50.1 bits (25), Expect = 0.008 Identities = 157/201 (78%) Strand = Plus / Plus Query: 341 agatccgtacaaaacactcttcgttgcaagacttaattacgagacatctgagagtagggt 400 |||||| ||||| ||| | |||||| |||||||||| ||||| | || ||||||| | | Sbjct: 459 agatccatacaagacattgttcgtttcaagacttaactacgaatcctcagagagtaagat 518 Query: 401 taagcgggagtttgaagcctatgggcctattaaaagggtacggctcgtaactgacaagga 460 ||| ||||||||||| | ||||| || |||||| |||| | | || ||||| || Sbjct: 519 taaaagggagtttgaatcttatggaccaattaaacgggttcatttggtgactgatcagct 578 Query: 461 tacgaataaacctagaggatatgcattcatagagtatatgcatactcgggatatgaaaaa 520 || |||||||| | ||||||||| ||||| ||||| ||||| || || || |||||| Sbjct: 579 gaccaataaacccaaaggatatgctttcattgagtacatgcacacccgtgacatgaaagc 638 Query: 521 tgcttacaagcaagctgatgg 541 ||| || |||||||||||||| Sbjct: 639 tgcatataagcaagctgatgg 659
>emb|BX823870.1|CNS0A6KL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS87ZC08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1391 Score = 50.1 bits (25), Expect = 0.008 Identities = 64/77 (83%) Strand = Plus / Plus Query: 465 aataaacctagaggatatgcattcatagagtatatgcatactcgggatatgaaaaatgct 524 |||||||| | ||||||||| ||||| ||||| ||||| || || || |||||| ||| Sbjct: 553 aataaacccaaaggatatgctttcattgagtacatgcacacccgtgacatgaaagctgca 612 Query: 525 tacaagcaagctgatgg 541 || |||||||||||||| Sbjct: 613 tataagcaagctgatgg 629
>gb|U52910.1|ATU52910 Arabidopsis thaliana U1 snRNP 70K truncated protein mRNA, long alternatively spliced transcript, complete cds Length = 2425 Score = 50.1 bits (25), Expect = 0.008 Identities = 64/77 (83%) Strand = Plus / Plus Query: 465 aataaacctagaggatatgcattcatagagtatatgcatactcgggatatgaaaaatgct 524 |||||||| | ||||||||| ||||| ||||| ||||| || || || |||||| ||| Sbjct: 1520 aataaacccaaaggatatgctttcattgagtacatgcacacccgtgacatgaaagctgca 1579 Query: 525 tacaagcaagctgatgg 541 || |||||||||||||| Sbjct: 1580 tataagcaagctgatgg 1596 Score = 48.1 bits (24), Expect = 0.031 Identities = 81/100 (81%) Strand = Plus / Plus Query: 341 agatccgtacaaaacactcttcgttgcaagacttaattacgagacatctgagagtagggt 400 |||||| ||||| ||| | |||||| |||||||||| ||||| | || ||||||| | | Sbjct: 486 agatccatacaagacattgttcgtttcaagacttaactacgaatcctcagagagtaagat 545 Query: 401 taagcgggagtttgaagcctatgggcctattaaaagggta 440 ||| ||||||||||| | ||||| || |||||| ||||| Sbjct: 546 taaaagggagtttgaatcttatggaccaattaaacgggta 585
>gb|M93439.1|ATHRNU1 Arabidopsis thaliana 70kDa small nuclear ribonucleoprotein U1 (RNU1) mRNA, partial cds Length = 1465 Score = 50.1 bits (25), Expect = 0.008 Identities = 157/201 (78%) Strand = Plus / Plus Query: 341 agatccgtacaaaacactcttcgttgcaagacttaattacgagacatctgagagtagggt 400 |||||| ||||| ||| | |||||| |||||||||| ||||| | || ||||||| | | Sbjct: 425 agatccatacaagacattgttcgtttcaagacttaactacgaatcctcagagagtaagat 484 Query: 401 taagcgggagtttgaagcctatgggcctattaaaagggtacggctcgtaactgacaagga 460 ||| ||||||||||| | ||||| || |||||| |||| | | || ||||| || Sbjct: 485 taaaagggagtttgaatcttatggaccaattaaacgggttcatttggtgactgatcagct 544 Query: 461 tacgaataaacctagaggatatgcattcatagagtatatgcatactcgggatatgaaaaa 520 || |||||||| | ||||||||| ||||| ||||| ||||| || || || |||||| Sbjct: 545 gaccaataaacccaaaggatatgctttcattgagtacatgcacacccgtgacatgaaagc 604 Query: 521 tgcttacaagcaagctgatgg 541 ||| || |||||||||||||| Sbjct: 605 tgcatataagcaagctgatgg 625
>ref|XM_633170.1| Dictyostelium discoideum hypothetical protein (DDB0218709), partial mRNA Length = 3108 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 476 aggatatgcattcatagagtat 497 |||||||||||||||||||||| Sbjct: 1884 aggatatgcattcatagagtat 1905
>emb|AL359738.7| Human DNA sequence from clone RP11-249D14 on chromosome 1 Contains part of a gene for a novel protein and 3' end of a novel gene, complete sequence Length = 77555 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 42 gggcagggccaccctacgggcc 63 |||||||||||||||||||||| Sbjct: 29062 gggcagggccaccctacgggcc 29041
>gb|AC183301.4| Pan troglodytes BAC clone CH251-243F23 from chromosome 19, complete sequence Length = 157473 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 287 ggtggccaaagagcttcagaa 307 ||||||||||||||||||||| Sbjct: 70399 ggtggccaaagagcttcagaa 70379 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggtggccaaagagcttcaga 306 |||||||||||||||||||| Sbjct: 89566 ggtggccaaagagcttcaga 89547 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggtggccaaagagcttcaga 306 |||||||||||||||||||| Sbjct: 6787 ggtggccaaagagcttcaga 6768
>gb|AC183545.2| Pan troglodytes BAC clone CH251-233G24 from chromosome 19, complete sequence Length = 151627 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 287 ggtggccaaagagcttcagaa 307 ||||||||||||||||||||| Sbjct: 95998 ggtggccaaagagcttcagaa 95978 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggtggccaaagagcttcaga 306 |||||||||||||||||||| Sbjct: 115167 ggtggccaaagagcttcaga 115148 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggtggccaaagagcttcaga 306 |||||||||||||||||||| Sbjct: 32386 ggtggccaaagagcttcaga 32367
>gb|AC119839.8| Mus musculus chromosome 1, clone RP24-170N13, complete sequence Length = 165405 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 cgtccagcagctcaagctca 39 |||||||||||||||||||| Sbjct: 32140 cgtccagcagctcaagctca 32159
>gb|AC183801.3| Pan troglodytes BAC clone CH251-162F3 from chromosome 19, complete sequence Length = 193838 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggtggccaaagagcttcaga 306 |||||||||||||||||||| Sbjct: 182552 ggtggccaaagagcttcaga 182533 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggtggccaaagagcttcaga 306 |||||||||||||||||||| Sbjct: 75068 ggtggccaaagagcttcaga 75049 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggtggccaaagagcttcaga 306 |||||||||||||||||||| Sbjct: 6830 ggtggccaaagagcttcaga 6811
>emb|CR974412.1| M.murinus DNA sequence from clone CH257-37C10, complete sequence Length = 250701 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 479 atatgcattcatagagtatatgca 502 ||||||||||||| |||||||||| Sbjct: 129497 atatgcattcataaagtatatgca 129520
>gb|AC005392.2| Homo sapiens chromosome 19 clone CTC-490G23, complete sequence Length = 243197 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 ggtggccaaagagcttcaga 306 |||||||||||||||||||| Sbjct: 114516 ggtggccaaagagcttcaga 114535 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 ggtggccaaagagcttcaga 306 |||||||||||||||||||| Sbjct: 50635 ggtggccaaagagcttcaga 50654 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 ggtggccaaagagcttcaga 306 |||||||||||||||||||| Sbjct: 31517 ggtggccaaagagcttcaga 31536
>gb|AC024077.2| Homo sapiens chromosome 19 clone LLNL-F_204C10, complete sequence Length = 42649 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggtggccaaagagcttcaga 306 |||||||||||||||||||| Sbjct: 17896 ggtggccaaagagcttcaga 17877
>emb|AL356032.4|CNS05TDD Human chromosome 14 DNA sequence BAC R-802A16 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 169936 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 479 atatgcattcatagagtata 498 |||||||||||||||||||| Sbjct: 25156 atatgcattcatagagtata 25137
>emb|AL355072.3|CNS05TC6 Human chromosome 14 DNA sequence BAC R-135B15 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 168065 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 479 atatgcattcatagagtata 498 |||||||||||||||||||| Sbjct: 162283 atatgcattcatagagtata 162264
>gb|AC005791.1|AC005791 Homo sapiens chromosome 19, cosmid R26371, complete sequence Length = 39266 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 ggtggccaaagagcttcaga 306 |||||||||||||||||||| Sbjct: 5892 ggtggccaaagagcttcaga 5911
>gb|AC005238.1|AC005238 Homo sapiens chromosome 19, cosmid F25173, complete sequence Length = 43690 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 ggtggccaaagagcttcaga 306 |||||||||||||||||||| Sbjct: 4147 ggtggccaaagagcttcaga 4166
>gb|AC004784.1|AC004784 Homo sapiens chromosome 19, cosmid R26425, complete sequence Length = 44760 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 ggtggccaaagagcttcaga 306 |||||||||||||||||||| Sbjct: 6642 ggtggccaaagagcttcaga 6661
>gb|AC004654.1|AC004654 Homo sapiens chromosome 19, cosmid F19434, complete sequence Length = 42139 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 gtggccaaagagcttcagaa 307 |||||||||||||||||||| Sbjct: 32728 gtggccaaagagcttcagaa 32747 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 ggtggccaaagagcttcaga 306 |||||||||||||||||||| Sbjct: 7534 ggtggccaaagagcttcaga 7553 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,470,855 Number of Sequences: 3902068 Number of extensions: 3470855 Number of successful extensions: 81084 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 39 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 80929 Number of HSP's gapped (non-prelim): 143 length of query: 555 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 532 effective length of database: 17,143,297,704 effective search space: 9120234378528 effective search space used: 9120234378528 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
