| Clone Name | basd18p03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence Length = 124050 Score = 854 bits (431), Expect = 0.0 Identities = 447/451 (99%), Gaps = 1/451 (0%) Strand = Plus / Plus Query: 2 aaatgagcc-gggttggtaagacatatatgcagaagcagaaaaatgaaccataactctgc 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78442 aaatgagccagggttggtaagacatatatgcagaagcagaaaaatgaaccataactctgc 78501 Query: 61 aaagagcaatacataaacaagggaagaaaggtgattaagtactgacctcaccggttagac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78502 aaagagcaatacataaacaagggaagaaaggtgattaagtactgacctcaccggttagac 78561 Query: 121 cacaaagatcatcaagagccattcttagggtaactaaaactccactaaattcttcacatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78562 cacaaagatcatcaagagccattcttagggtaactaaaactccactaaattcttcacatg 78621 Query: 181 cttcagctgcacgaaatacattttccaaagcttcttgaccagccttatcatcagtagctt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78622 cttcagctgcacgaaatacattttccaaagcttcttgaccagccttatcatcagtagctt 78681 Query: 241 tagatacttctttctttgcttcctcaacaagagaacccggaagctcattccagctggcag 300 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 78682 tagatacttctttctttgcttcctcaacgagagaacccggaagctcattccagctggcag 78741 Query: 301 ccatcaaatccttaaatgcagtctcaattttcgggtcagatattggaggcagatgtttct 360 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 78742 ccatcaaatccttaaatgcagtctcaatttccgggtcagatattggaggcagatgtttct 78801 Query: 361 catttgaactgaacatgcgccttgagttccatgagaaagcattgttgccatctgtgtata 420 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 78802 catttgaactgaacatgcgcctggagttccatgagaaagcattgttgccatctgtgtata 78861 Query: 421 caacatgaaaatgttaatgaacaatgagcac 451 ||||||||||||||||||||||||||||||| Sbjct: 78862 caacatgaaaatgttaatgaacaatgagcac 78892 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 11 gggttggtaagacatatatgcagaagcagaaaaatga 47 |||||||||||||||||| ||||||| |||||||||| Sbjct: 78411 gggttggtaagacatataagcagaaggagaaaaatga 78447
>gb|AF488415.1| Triticum monococcum chromosome 7Am BAC 5K14 complete sequence Length = 168746 Score = 601 bits (303), Expect = e-169 Identities = 360/379 (94%) Strand = Plus / Plus Query: 73 ataaacaagggaagaaaggtgattaagtactgacctcaccggttagaccacaaagatcat 132 |||||||| |||||| ||||||||||||||||||||| || || |||||||||||||||| Sbjct: 79485 ataaacaatggaagagaggtgattaagtactgacctcgcccgtaagaccacaaagatcat 79544 Query: 133 caagagccattcttagggtaactaaaactccactaaattcttcacatgcttcagctgcac 192 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 79545 caagagccattcttagggtaactaaaactccactaaactcttcacatgcttcagctgcac 79604 Query: 193 gaaatacattttccaaagcttcttgaccagccttatcatcagtagctttagatacttctt 252 |||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||| Sbjct: 79605 gaaatacattttccaaggcttcttgaccagccttatcatcagtagccatagatactgctt 79664 Query: 253 tctttgcttcctcaacaagagaacccggaagctcattccagctggcagccatcaaatcct 312 ||||||||||||| ||||||||||| |||||||| |||||||| |||||||||||||||| Sbjct: 79665 tctttgcttcctccacaagagaacctggaagctcgttccagctagcagccatcaaatcct 79724 Query: 313 taaatgcagtctcaattttcgggtcagatattggaggcagatgtttctcatttgaactga 372 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 79725 taaatgcagtctcaattttcgggtcagatattgcaggcagatgtttctcatttgaactga 79784 Query: 373 acatgcgccttgagttccatgagaaagcattgttgccatctgtgtatacaacatgaaaat 432 |||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 79785 acatgcgcctggagttccatgagaaagcattgttgccatctgagtatacaatatgaaaat 79844 Query: 433 gttaatgaacaatgagcac 451 |||||| |||||||||||| Sbjct: 79845 gttaatcaacaatgagcac 79863
>emb|AL606598.3|OSJN00036 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G16, complete sequence Length = 114051 Score = 278 bits (140), Expect = 2e-71 Identities = 275/320 (85%) Strand = Plus / Minus Query: 91 gtgattaagtactgacctcaccggttagaccacaaagatcatcaagagccattcttaggg 150 ||||||| |||||||||||||| |||| ||||||||||||||| |||||||||||||||| Sbjct: 98409 gtgattaggtactgacctcaccagttataccacaaagatcatctagagccattcttaggg 98350 Query: 151 taactaaaactccactaaattcttcacatgcttcagctgcacgaaatacattttccaaag 210 | |||| |||||||| ||||||||||||||| ||||||||||||||||||||| ||||| Sbjct: 98349 tgactagaactccaccaaattcttcacatgcctcagctgcacgaaatacatttagcaaag 98290 Query: 211 cttcttgaccagccttatcatcagtagctttagatacttctttctttgcttcctcaacaa 270 | |||| |||||||||||||| |||||||| ||| | ||||||||||||| |||| Sbjct: 98289 cctctttcccagccttatcatccgtagctttggatgcagctttctttgcttcaattacaa 98230 Query: 271 gagaacccggaagctcattccagctggcagccatcaaatccttaaatgcagtctcaattt 330 ||||| | ||||| || ||||||| |||||||||||||||||||| |||| |||| || Sbjct: 98229 gagaatctggaagtccagtccagctagcagccatcaaatccttaaacgcagattcaactt 98170 Query: 331 tcgggtcagatattggaggcagatgtttctcatttgaactgaacatgcgccttgagttcc 390 ||||||||||| | |||||||| || |||||||| ||||||| |||||| |||||| Sbjct: 98169 ctgggtcagatatcgccggcagatgcttttcatttgagctgaacaagcgcctcaagttcc 98110 Query: 391 atgagaaagcattgttgcca 410 |||| || |||||||||||| Sbjct: 98109 atgaaaaggcattgttgcca 98090
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 278 bits (140), Expect = 2e-71 Identities = 275/320 (85%) Strand = Plus / Minus Query: 91 gtgattaagtactgacctcaccggttagaccacaaagatcatcaagagccattcttaggg 150 ||||||| |||||||||||||| |||| ||||||||||||||| |||||||||||||||| Sbjct: 20663975 gtgattaggtactgacctcaccagttataccacaaagatcatctagagccattcttaggg 20663916 Query: 151 taactaaaactccactaaattcttcacatgcttcagctgcacgaaatacattttccaaag 210 | |||| |||||||| ||||||||||||||| ||||||||||||||||||||| ||||| Sbjct: 20663915 tgactagaactccaccaaattcttcacatgcctcagctgcacgaaatacatttagcaaag 20663856 Query: 211 cttcttgaccagccttatcatcagtagctttagatacttctttctttgcttcctcaacaa 270 | |||| |||||||||||||| |||||||| ||| | ||||||||||||| |||| Sbjct: 20663855 cctctttcccagccttatcatccgtagctttggatgcagctttctttgcttcaattacaa 20663796 Query: 271 gagaacccggaagctcattccagctggcagccatcaaatccttaaatgcagtctcaattt 330 ||||| | ||||| || ||||||| |||||||||||||||||||| |||| |||| || Sbjct: 20663795 gagaatctggaagtccagtccagctagcagccatcaaatccttaaacgcagattcaactt 20663736 Query: 331 tcgggtcagatattggaggcagatgtttctcatttgaactgaacatgcgccttgagttcc 390 ||||||||||| | |||||||| || |||||||| ||||||| |||||| |||||| Sbjct: 20663735 ctgggtcagatatcgccggcagatgcttttcatttgagctgaacaagcgcctcaagttcc 20663676 Query: 391 atgagaaagcattgttgcca 410 |||| || |||||||||||| Sbjct: 20663675 atgaaaaggcattgttgcca 20663656
>emb|AL606618.4|OSJN00062 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0108J11, complete sequence Length = 124629 Score = 278 bits (140), Expect = 2e-71 Identities = 275/320 (85%) Strand = Plus / Minus Query: 91 gtgattaagtactgacctcaccggttagaccacaaagatcatcaagagccattcttaggg 150 ||||||| |||||||||||||| |||| ||||||||||||||| |||||||||||||||| Sbjct: 10126 gtgattaggtactgacctcaccagttataccacaaagatcatctagagccattcttaggg 10067 Query: 151 taactaaaactccactaaattcttcacatgcttcagctgcacgaaatacattttccaaag 210 | |||| |||||||| ||||||||||||||| ||||||||||||||||||||| ||||| Sbjct: 10066 tgactagaactccaccaaattcttcacatgcctcagctgcacgaaatacatttagcaaag 10007 Query: 211 cttcttgaccagccttatcatcagtagctttagatacttctttctttgcttcctcaacaa 270 | |||| |||||||||||||| |||||||| ||| | ||||||||||||| |||| Sbjct: 10006 cctctttcccagccttatcatccgtagctttggatgcagctttctttgcttcaattacaa 9947 Query: 271 gagaacccggaagctcattccagctggcagccatcaaatccttaaatgcagtctcaattt 330 ||||| | ||||| || ||||||| |||||||||||||||||||| |||| |||| || Sbjct: 9946 gagaatctggaagtccagtccagctagcagccatcaaatccttaaacgcagattcaactt 9887 Query: 331 tcgggtcagatattggaggcagatgtttctcatttgaactgaacatgcgccttgagttcc 390 ||||||||||| | |||||||| || |||||||| ||||||| |||||| |||||| Sbjct: 9886 ctgggtcagatatcgccggcagatgcttttcatttgagctgaacaagcgcctcaagttcc 9827 Query: 391 atgagaaagcattgttgcca 410 |||| || |||||||||||| Sbjct: 9826 atgaaaaggcattgttgcca 9807
>ref|XM_472441.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 771 Score = 254 bits (128), Expect = 2e-64 Identities = 260/304 (85%) Strand = Plus / Minus Query: 107 ctcaccggttagaccacaaagatcatcaagagccattcttagggtaactaaaactccact 166 |||||| |||| ||||||||||||||| ||||||||||||||||| |||| |||||||| Sbjct: 453 ctcaccagttataccacaaagatcatctagagccattcttagggtgactagaactccacc 394 Query: 167 aaattcttcacatgcttcagctgcacgaaatacattttccaaagcttcttgaccagcctt 226 ||||||||||||||| ||||||||||||||||||||| |||||| |||| |||||||| Sbjct: 393 aaattcttcacatgcctcagctgcacgaaatacatttagcaaagcctctttcccagcctt 334 Query: 227 atcatcagtagctttagatacttctttctttgcttcctcaacaagagaacccggaagctc 286 |||||| |||||||| ||| | ||||||||||||| ||||||||| | ||||| | Sbjct: 333 atcatccgtagctttggatgcagctttctttgcttcaattacaagagaatctggaagtcc 274 Query: 287 attccagctggcagccatcaaatccttaaatgcagtctcaattttcgggtcagatattgg 346 | ||||||| |||||||||||||||||||| |||| |||| || ||||||||||| | Sbjct: 273 agtccagctagcagccatcaaatccttaaacgcagattcaacttctgggtcagatatcgc 214 Query: 347 aggcagatgtttctcatttgaactgaacatgcgccttgagttccatgagaaagcattgtt 406 |||||||| || |||||||| ||||||| |||||| |||||||||| || |||||||| Sbjct: 213 cggcagatgcttttcatttgagctgaacaagcgcctcaagttccatgaaaaggcattgtt 154 Query: 407 gcca 410 |||| Sbjct: 153 gcca 150
>dbj|AK119714.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-F05, full insert sequence Length = 970 Score = 254 bits (128), Expect = 2e-64 Identities = 260/304 (85%) Strand = Plus / Minus Query: 107 ctcaccggttagaccacaaagatcatcaagagccattcttagggtaactaaaactccact 166 |||||| |||| ||||||||||||||| ||||||||||||||||| |||| |||||||| Sbjct: 517 ctcaccagttataccacaaagatcatctagagccattcttagggtgactagaactccacc 458 Query: 167 aaattcttcacatgcttcagctgcacgaaatacattttccaaagcttcttgaccagcctt 226 ||||||||||||||| ||||||||||||||||||||| |||||| |||| |||||||| Sbjct: 457 aaattcttcacatgcctcagctgcacgaaatacatttagcaaagcctctttcccagcctt 398 Query: 227 atcatcagtagctttagatacttctttctttgcttcctcaacaagagaacccggaagctc 286 |||||| |||||||| ||| | ||||||||||||| ||||||||| | ||||| | Sbjct: 397 atcatccgtagctttggatgcagctttctttgcttcaattacaagagaatctggaagtcc 338 Query: 287 attccagctggcagccatcaaatccttaaatgcagtctcaattttcgggtcagatattgg 346 | ||||||| |||||||||||||||||||| |||| |||| || ||||||||||| | Sbjct: 337 agtccagctagcagccatcaaatccttaaacgcagattcaacttctgggtcagatatcgc 278 Query: 347 aggcagatgtttctcatttgaactgaacatgcgccttgagttccatgagaaagcattgtt 406 |||||||| || |||||||| ||||||| |||||| |||||||||| || |||||||| Sbjct: 277 cggcagatgcttttcatttgagctgaacaagcgcctcaagttccatgaaaaggcattgtt 218 Query: 407 gcca 410 |||| Sbjct: 217 gcca 214
>dbj|AK106155.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-A04, full insert sequence Length = 1116 Score = 254 bits (128), Expect = 2e-64 Identities = 260/304 (85%) Strand = Plus / Minus Query: 107 ctcaccggttagaccacaaagatcatcaagagccattcttagggtaactaaaactccact 166 |||||| |||| ||||||||||||||| ||||||||||||||||| |||| |||||||| Sbjct: 516 ctcaccagttataccacaaagatcatctagagccattcttagggtgactagaactccacc 457 Query: 167 aaattcttcacatgcttcagctgcacgaaatacattttccaaagcttcttgaccagcctt 226 ||||||||||||||| ||||||||||||||||||||| |||||| |||| |||||||| Sbjct: 456 aaattcttcacatgcctcagctgcacgaaatacatttagcaaagcctctttcccagcctt 397 Query: 227 atcatcagtagctttagatacttctttctttgcttcctcaacaagagaacccggaagctc 286 |||||| |||||||| ||| | ||||||||||||| ||||||||| | ||||| | Sbjct: 396 atcatccgtagctttggatgcagctttctttgcttcaattacaagagaatctggaagtcc 337 Query: 287 attccagctggcagccatcaaatccttaaatgcagtctcaattttcgggtcagatattgg 346 | ||||||| |||||||||||||||||||| |||| |||| || ||||||||||| | Sbjct: 336 agtccagctagcagccatcaaatccttaaacgcagattcaacttctgggtcagatatcgc 277 Query: 347 aggcagatgtttctcatttgaactgaacatgcgccttgagttccatgagaaagcattgtt 406 |||||||| || |||||||| ||||||| |||||| |||||||||| || |||||||| Sbjct: 276 cggcagatgcttttcatttgagctgaacaagcgcctcaagttccatgaaaaggcattgtt 217 Query: 407 gcca 410 |||| Sbjct: 216 gcca 213
>dbj|AK099124.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039I07, full insert sequence Length = 1007 Score = 254 bits (128), Expect = 2e-64 Identities = 260/304 (85%) Strand = Plus / Minus Query: 107 ctcaccggttagaccacaaagatcatcaagagccattcttagggtaactaaaactccact 166 |||||| |||| ||||||||||||||| ||||||||||||||||| |||| |||||||| Sbjct: 502 ctcaccagttataccacaaagatcatctagagccattcttagggtgactagaactccacc 443 Query: 167 aaattcttcacatgcttcagctgcacgaaatacattttccaaagcttcttgaccagcctt 226 ||||||||||||||| ||||||||||||||||||||| |||||| |||| |||||||| Sbjct: 442 aaattcttcacatgcctcagctgcacgaaatacatttagcaaagcctctttcccagcctt 383 Query: 227 atcatcagtagctttagatacttctttctttgcttcctcaacaagagaacccggaagctc 286 |||||| |||||||| ||| | ||||||||||||| ||||||||| | ||||| | Sbjct: 382 atcatccgtagctttggatgcagctttctttgcttcaattacaagagaatctggaagtcc 323 Query: 287 attccagctggcagccatcaaatccttaaatgcagtctcaattttcgggtcagatattgg 346 | ||||||| |||||||||||||||||||| |||| |||| || ||||||||||| | Sbjct: 322 agtccagctagcagccatcaaatccttaaacgcagattcaacttctgggtcagatatcgc 263 Query: 347 aggcagatgtttctcatttgaactgaacatgcgccttgagttccatgagaaagcattgtt 406 |||||||| || |||||||| ||||||| |||||| |||||||||| || |||||||| Sbjct: 262 cggcagatgcttttcatttgagctgaacaagcgcctcaagttccatgaaaaggcattgtt 203 Query: 407 gcca 410 |||| Sbjct: 202 gcca 199
>dbj|AK061030.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-H01, full insert sequence Length = 1111 Score = 246 bits (124), Expect = 5e-62 Identities = 259/304 (85%) Strand = Plus / Minus Query: 107 ctcaccggttagaccacaaagatcatcaagagccattcttagggtaactaaaactccact 166 |||||| |||| ||||||||||||||| |||||| |||||||||| |||| |||||||| Sbjct: 516 ctcaccagttataccacaaagatcatctagagcccttcttagggtgactagaactccacc 457 Query: 167 aaattcttcacatgcttcagctgcacgaaatacattttccaaagcttcttgaccagcctt 226 ||||||||||||||| ||||||||||||||||||||| |||||| |||| |||||||| Sbjct: 456 aaattcttcacatgcctcagctgcacgaaatacatttagcaaagcctctttcccagcctt 397 Query: 227 atcatcagtagctttagatacttctttctttgcttcctcaacaagagaacccggaagctc 286 |||||| |||||||| ||| | ||||||||||||| ||||||||| | ||||| | Sbjct: 396 atcatccgtagctttggatgcagctttctttgcttcaattacaagagaatctggaagtcc 337 Query: 287 attccagctggcagccatcaaatccttaaatgcagtctcaattttcgggtcagatattgg 346 | ||||||| |||||||||||||||||||| |||| |||| || ||||||||||| | Sbjct: 336 agtccagctagcagccatcaaatccttaaacgcagattcaacttctgggtcagatatcgc 277 Query: 347 aggcagatgtttctcatttgaactgaacatgcgccttgagttccatgagaaagcattgtt 406 |||||||| || |||||||| ||||||| |||||| |||||||||| || |||||||| Sbjct: 276 cggcagatgcttttcatttgagctgaacaagcgcctcaagttccatgaaaaggcattgtt 217 Query: 407 gcca 410 |||| Sbjct: 216 gcca 213
>gb|AY105615.1| Zea mays PCO070046 mRNA sequence Length = 1106 Score = 214 bits (108), Expect = 2e-52 Identities = 216/252 (85%) Strand = Plus / Minus Query: 120 ccacaaagatcatcaagagccattcttagggtaactaaaactccactaaattcttcacat 179 ||||| ||||||||||||||||||||||||||||| || |||||| || ||||||||| Sbjct: 518 ccacacagatcatcaagagccattcttagggtaaccaaggttccactgaaatcttcacat 459 Query: 180 gcttcagctgcacgaaatacattttccaaagcttcttgaccagccttatcatcagtagct 239 || |||||||||| ||||||||||| |||||| ||||||||||| ||||||| || ||| Sbjct: 458 gcctcagctgcacaaaatacatttttcaaagcctcttgaccagcactatcatcggtggct 399 Query: 240 ttagatacttctttctttgcttcctcaacaagagaacccggaagctcattccagctggca 299 |||||| || |||||||||||||| | ||||||||| | ||||| |||||||| || ||| Sbjct: 398 ttagatgctgctttctttgcttccgctacaagagaatctggaagttcattccaactagca 339 Query: 300 gccatcaaatccttaaatgcagtctcaattttcgggtcagatattggaggcagatgtttc 359 |||| ||||||||||||||||| || |||| || |||||||||| |||| ||||| Sbjct: 338 gccaacaaatccttaaatgcagattctatttctggatcagatattgcgggcaagtgtttt 279 Query: 360 tcatttgaactg 371 |||||||||||| Sbjct: 278 tcatttgaactg 267
>emb|BX816964.1|CNS0ADA8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH78ZH12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 947 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Minus Query: 180 gcttcagctgcacgaaatacattttccaaagcttcttgaccagccttatcatc 232 ||||||||||| || |||||||||| |||||| ||||| || ||||| ||||| Sbjct: 489 gcttcagctgctcggaatacatttttcaaagcctcttgccctgccttgtcatc 437
>gb|BT013504.1| Lycopersicon esculentum clone 132192F, mRNA sequence Length = 1056 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Minus Query: 282 agctcattccagctggcagccatcaaatccttaaa 316 ||||||| |||||| ||||||||||| |||||||| Sbjct: 408 agctcatcccagcttgcagccatcaagtccttaaa 374
>gb|AC144502.5| Medicago truncatula clone mth2-5p10, complete sequence Length = 91507 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 34 aagcagaaaaatgaaccataac 55 |||||||||||||||||||||| Sbjct: 55574 aagcagaaaaatgaaccataac 55595
>gb|AC127168.17| Medicago truncatula clone mth2-15m13, complete sequence Length = 117770 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 25 tatatgcagaagcagaaaaatg 46 |||||||||||||||||||||| Sbjct: 74458 tatatgcagaagcagaaaaatg 74479
>emb|BX901878.6| Zebrafish DNA sequence from clone DKEY-11O15 in linkage group 21, complete sequence Length = 217310 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 415 tgtatacaacatgaaaatgtta 436 |||||||||||||||||||||| Sbjct: 165722 tgtatacaacatgaaaatgtta 165701
>ref|NM_103636.1| Arabidopsis thaliana unknown protein AT1G47420 mRNA, complete cds Length = 1107 Score = 42.1 bits (21), Expect = 1.6 Identities = 45/53 (84%) Strand = Plus / Minus Query: 180 gcttcagctgcacgaaatacattttccaaagcttcttgaccagccttatcatc 232 ||||||||||| || || ||||||| |||||| ||||| || ||||| ||||| Sbjct: 535 gcttcagctgctcggaacacatttttcaaagcctcttgccctgccttgtcatc 483
>gb|AC146539.2| Gasterosteus aculeatus clone CH213-129C17, complete sequence Length = 202686 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 401 attgttgccatctgtgtatacaaca 425 ||||||||||||||||| ||||||| Sbjct: 57730 attgttgccatctgtgtgtacaaca 57706
>gb|AC121828.3| Mus musculus BAC clone RP23-478K4 from chromosome 1, complete sequence Length = 179626 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 408 ccatctgtgtatacaacatga 428 ||||||||||||||||||||| Sbjct: 38487 ccatctgtgtatacaacatga 38507
>gb|AC117221.3| Mus musculus BAC clone RP23-347F2 from 1, complete sequence Length = 194077 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 408 ccatctgtgtatacaacatga 428 ||||||||||||||||||||| Sbjct: 140972 ccatctgtgtatacaacatga 140992
>gb|AC146690.1| Gasterosteus aculeatus clone CH213-156J22, complete sequence Length = 166930 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 401 attgttgccatctgtgtatacaaca 425 ||||||||||||||||| ||||||| Sbjct: 28405 attgttgccatctgtgtgtacaaca 28381
>gb|BT000345.1| Arabidopsis thaliana Unknown protein (At1g47420) mRNA, complete cds Length = 819 Score = 42.1 bits (21), Expect = 1.6 Identities = 45/53 (84%) Strand = Plus / Minus Query: 180 gcttcagctgcacgaaatacattttccaaagcttcttgaccagccttatcatc 232 ||||||||||| || || ||||||| |||||| ||||| || ||||| ||||| Sbjct: 458 gcttcagctgctcggaacacatttttcaaagcctcttgccctgccttgtcatc 406
>gb|AF344326.1| Arabidopsis thaliana unknown protein (At1g47420) mRNA, complete cds Length = 774 Score = 42.1 bits (21), Expect = 1.6 Identities = 45/53 (84%) Strand = Plus / Minus Query: 180 gcttcagctgcacgaaatacattttccaaagcttcttgaccagccttatcatc 232 ||||||||||| || || ||||||| |||||| ||||| || ||||| ||||| Sbjct: 458 gcttcagctgctcggaacacatttttcaaagcctcttgccctgccttgtcatc 406
>gb|AY062990.1| Arabidopsis thaliana unknown protein (At1g47420) mRNA, complete cds Length = 805 Score = 42.1 bits (21), Expect = 1.6 Identities = 45/53 (84%) Strand = Plus / Minus Query: 180 gcttcagctgcacgaaatacattttccaaagcttcttgaccagccttatcatc 232 ||||||||||| || || ||||||| |||||| ||||| || ||||| ||||| Sbjct: 458 gcttcagctgctcggaacacatttttcaaagcctcttgccctgccttgtcatc 406
>gb|AY034947.1| Arabidopsis thaliana unknown protein (At1g47420) mRNA, complete cds Length = 1088 Score = 42.1 bits (21), Expect = 1.6 Identities = 45/53 (84%) Strand = Plus / Minus Query: 180 gcttcagctgcacgaaatacattttccaaagcttcttgaccagccttatcatc 232 ||||||||||| || || ||||||| |||||| ||||| || ||||| ||||| Sbjct: 507 gcttcagctgctcggaacacatttttcaaagcctcttgccctgccttgtcatc 455
>emb|AL731688.14| Mouse DNA sequence from clone RP23-291K6 on chromosome 11 Contains the 3' end of the Slit3 gene for slit homolog 3 (Drosophila), complete sequence Length = 113164 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 412 ctgtgtatacaacatgaaaat 432 ||||||||||||||||||||| Sbjct: 16941 ctgtgtatacaacatgaaaat 16921
>gb|AC114277.2| Homo sapiens chromosome 5 clone CTD-2009F3, complete sequence Length = 100496 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 26 atatgcagaagcagaaaaatgaacc 50 |||| |||||||||||||||||||| Sbjct: 57729 atatccagaagcagaaaaatgaacc 57753
>gb|AC026439.4| Homo sapiens chromosome 5 clone CTD-2267H19, complete sequence Length = 105081 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 26 atatgcagaagcagaaaaatgaacc 50 |||| |||||||||||||||||||| Sbjct: 70593 atatccagaagcagaaaaatgaacc 70569
>gb|AY054563.1| Arabidopsis thaliana Unknown protein (At1g47420; F16N3.26) mRNA, complete cds Length = 988 Score = 42.1 bits (21), Expect = 1.6 Identities = 45/53 (84%) Strand = Plus / Minus Query: 180 gcttcagctgcacgaaatacattttccaaagcttcttgaccagccttatcatc 232 ||||||||||| || || ||||||| |||||| ||||| || ||||| ||||| Sbjct: 479 gcttcagctgctcggaacacatttttcaaagcctcttgccctgccttgtcatc 427
>gb|AC160403.5| Mus musculus 10 BAC RP24-286J14 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 180869 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 350 cagatgtttctcatttgaact 370 ||||||||||||||||||||| Sbjct: 857 cagatgtttctcatttgaact 837
>emb|BX815950.1|CNS0AD19 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH19ZF03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 757 Score = 42.1 bits (21), Expect = 1.6 Identities = 45/53 (84%) Strand = Plus / Minus Query: 180 gcttcagctgcacgaaatacattttccaaagcttcttgaccagccttatcatc 232 ||||||||||| || || ||||||| |||||| ||||| || ||||| ||||| Sbjct: 205 gcttcagctgctcggaacacatttttcaaagcctcttgccctgccttgtcatc 153
>emb|BX816430.1|CNS0AAP4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH48ZA03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 999 Score = 42.1 bits (21), Expect = 1.6 Identities = 45/53 (84%) Strand = Plus / Minus Query: 180 gcttcagctgcacgaaatacattttccaaagcttcttgaccagccttatcatc 232 ||||||||||| || || ||||||| |||||| ||||| || ||||| ||||| Sbjct: 508 gcttcagctgctcggaacacatttttcaaagcctcttgccctgccttgtcatc 456
>gb|AY084381.1| Arabidopsis thaliana clone 10618 mRNA, complete sequence Length = 1107 Score = 42.1 bits (21), Expect = 1.6 Identities = 45/53 (84%) Strand = Plus / Minus Query: 180 gcttcagctgcacgaaatacattttccaaagcttcttgaccagccttatcatc 232 ||||||||||| || || ||||||| |||||| ||||| || ||||| ||||| Sbjct: 535 gcttcagctgctcggaacacatttttcaaagcctcttgccctgccttgtcatc 483
>gb|AC015449.3|AC015449 Arabidopsis thaliana chromosome I BAC T3F24 genomic sequence, complete sequence Length = 77424 Score = 42.1 bits (21), Expect = 1.6 Identities = 45/53 (84%) Strand = Plus / Minus Query: 180 gcttcagctgcacgaaatacattttccaaagcttcttgaccagccttatcatc 232 ||||||||||| || || ||||||| |||||| ||||| || ||||| ||||| Sbjct: 10652 gcttcagctgctcggaacacatttttcaaagcctcttgccctgccttgtcatc 10600
>gb|AC007519.2|F16N3 Sequence of BAC F16N3 from Arabidopsis thaliana chromosome 1, complete sequence Length = 171769 Score = 42.1 bits (21), Expect = 1.6 Identities = 45/53 (84%) Strand = Plus / Minus Query: 180 gcttcagctgcacgaaatacattttccaaagcttcttgaccagccttatcatc 232 ||||||||||| || || ||||||| |||||| ||||| || ||||| ||||| Sbjct: 169780 gcttcagctgctcggaacacatttttcaaagcctcttgccctgccttgtcatc 169728
>emb|AL138996.4|CNS01DX1 Human chromosome 14 DNA sequence BAC R-902B17 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 184260 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 242 agatacttctttctttgcttc 262 ||||||||||||||||||||| Sbjct: 142998 agatacttctttctttgcttc 142978
>gb|AC153422.5| Mus musculus 10 BAC RP23-427I15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 197906 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 350 cagatgtttctcatttgaact 370 ||||||||||||||||||||| Sbjct: 37279 cagatgtttctcatttgaact 37299
>emb|AL806522.4| Mouse DNA sequence from clone RP23-167H2 on chromosome 2, complete sequence Length = 189104 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 356 tttctcatttgaactgaacat 376 ||||||||||||||||||||| Sbjct: 53779 tttctcatttgaactgaacat 53759
>gb|AY632359.1| Gossypium hirsutum BAC 155C17, complete sequence Length = 103930 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 tatgcagaagcagaaaaatg 46 |||||||||||||||||||| Sbjct: 65994 tatgcagaagcagaaaaatg 65975
>ref|NM_022166.2| Homo sapiens xylosyltransferase I (XYLT1), mRNA Length = 4178 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 agaagcagaaaaatgaacca 51 |||||||||||||||||||| Sbjct: 3558 agaagcagaaaaatgaacca 3539
>gb|AC162459.2| Mus musculus chromosome 3, clone RP23-80A8, complete sequence Length = 207515 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 tacttctttctttgcttcct 264 |||||||||||||||||||| Sbjct: 181510 tacttctttctttgcttcct 181529
>emb|CR786566.25| Zebrafish DNA sequence from clone DKEYP-2E4 in linkage group 13, complete sequence Length = 131584 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 gggaagaaaggtgattaagt 100 |||||||||||||||||||| Sbjct: 131288 gggaagaaaggtgattaagt 131307
>gb|AC100149.12| Mus musculus chromosome 10, clone RP23-43F3, complete sequence Length = 184927 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 242 agatacttctttctttgcttcctc 265 |||| ||||||||||||||||||| Sbjct: 66635 agattcttctttctttgcttcctc 66658
>gb|AC097647.2| Homo sapiens cosmid clone XXcos-2185C16 from 7, complete sequence Length = 45470 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 agatcatcaagagccattct 145 |||||||||||||||||||| Sbjct: 5137 agatcatcaagagccattct 5118
>emb|AL732372.15| Human DNA sequence from clone RP4-669L17 on chromosome 1 Contains five novel genes, two novel pseudogenes and the gene for a novel protein similar to the olfactory receptor family, complete sequence Length = 153649 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 agatcatcaagagccattct 145 |||||||||||||||||||| Sbjct: 31889 agatcatcaagagccattct 31908
>emb|AL669831.13| Human DNA sequence from clone RP11-206L10 on chromosome 1 Contains thirteen novel genes, a novel pseudogene, a novel gene similar to the F-box only protein 25 gene(FBXO25), a novel pseudogene similar to the beta-tubulin family and a CpG island, complete sequence Length = 179567 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 agatcatcaagagccattct 145 |||||||||||||||||||| Sbjct: 7169 agatcatcaagagccattct 7150
>emb|AL627309.15| Human DNA sequence from clone RP11-34P13 on chromosome 1 Contains a pseudogene similar to part of DEAD/H box polypeptide 11 (CHL1-like helicase homolog, S. cerevisiae) (DDX11), two novel pseudogenes, nine novel genes, two novel proteins similar to the olfactory receptor family, a capicua homolog (Drosophila) (CIC) pseudogene and two CpG islands, complete sequence Length = 166904 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 agatcatcaagagccattct 145 |||||||||||||||||||| Sbjct: 103208 agatcatcaagagccattct 103189
>emb|AL606534.15| Human DNA sequence from clone RP11-261C10 on chromosome 1 Contains four novel genes, the 5' end of a novel gene and the 3' end of the gene for KARP-1-binding protein (KAB), complete sequence Length = 183541 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 agatcatcaagagccattct 145 |||||||||||||||||||| Sbjct: 46401 agatcatcaagagccattct 46382
>emb|AL450339.5| Human DNA sequence from clone RP11-25C17 on chromosome 6 Contains part of a novel gene (contains FLJ31738 and KIAA1209), complete sequence Length = 63892 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 cagaagcagaaaaatgaacc 50 |||||||||||||||||||| Sbjct: 18841 cagaagcagaaaaatgaacc 18860
>emb|AL353654.29| Human DNA sequence from clone RP1-24O22 on chromosome 6 Contains an olfactory receptor pseudogene, a gene for a novel protein similar to septin and a novel pseudogene, complete sequence Length = 86701 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 agatcatcaagagccattct 145 |||||||||||||||||||| Sbjct: 64905 agatcatcaagagccattct 64886
>emb|AL137028.9| Human DNA sequence from clone RP11-476I15 on chromosome 20 Contains the 3' end of the C20orf36 gene, a capicua homolog (Drosophila) (CIC) pseudogene, the C20orf69 gene and two CpG islands, complete sequence Length = 59425 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 agatcatcaagagccattct 145 |||||||||||||||||||| Sbjct: 35608 agatcatcaagagccattct 35627
>emb|AL133216.10| Human DNA sequence from clone RP11-291L22 on chromosome 10 Contains the 3' end of a gene for a novel protein similar to 17-beta-hydroxysteroid dehydrogenase type 7 (HSD17B7), the gene for a novel protein similar to CDC10 cell division cycle 10, homolog (S. cerevisiae) (CDC10), a novel gene, a novel gene containing FLJ14186, a capicua homolog (Drosophila) (CIC) pseudogene and a CpG island, complete sequence Length = 166835 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 agatcatcaagagccattct 145 |||||||||||||||||||| Sbjct: 110077 agatcatcaagagccattct 110096
>gb|AC124157.4| Equus caballus clone CH241-37P10, complete sequence Length = 193986 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 cttcctcaacaagagaacccggaa 282 ||||||||||||||||||| |||| Sbjct: 110994 cttcctcaacaagagaacctggaa 110971
>emb|AL031259.1|HS191N21 Human DNA sequence from clone RP1-191N21 on chromosome 6q27 Contains a 7 transmembrane receptor (rhodopsin family) (olfactory receptor like) pseudogene, the PDCD2 gene for programmed cell death 2 (RP8 homolog), the TBP gene for TATA box binding protein, the PSMB1 gene for proteasome subunit HC5 and two CpG islands, complete sequence Length = 113820 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 agatcatcaagagccattct 145 |||||||||||||||||||| Sbjct: 27405 agatcatcaagagccattct 27386
>gb|AC121252.4| Homo sapiens chromosome 3 clone RP11-148G20, complete sequence Length = 105166 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 305 caaatccttaaatgcagtctcaattttc 332 ||||||||||||| || ||||||||||| Sbjct: 44588 caaatccttaaattcactctcaattttc 44615
>emb|BX927279.15| Zebrafish DNA sequence from clone CH211-101N16 in linkage group 13, complete sequence Length = 182020 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 gggaagaaaggtgattaagt 100 |||||||||||||||||||| Sbjct: 20746 gggaagaaaggtgattaagt 20765
>emb|AJ720418.1| Gallus gallus mRNA for hypothetical protein, clone 17e22 Length = 2441 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 412 ctgtgtatacaacatgaaaatgtt 435 |||||||| ||||||||||||||| Sbjct: 279 ctgtgtattcaacatgaaaatgtt 256
>emb|BX530081.6| Zebrafish DNA sequence from clone CH211-121B13 in linkage group 14, complete sequence Length = 162058 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 aagggaagaaaggtgattaa 98 |||||||||||||||||||| Sbjct: 30491 aagggaagaaaggtgattaa 30472
>emb|BX323467.8| Zebrafish DNA sequence from clone DKEY-48N15, complete sequence Length = 116326 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 gggaagaaaggtgattaagt 100 |||||||||||||||||||| Sbjct: 109857 gggaagaaaggtgattaagt 109876
>gb|AC110079.3| Homo sapiens BAC clone RP11-384K6 from 4, complete sequence Length = 167099 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 agatcatcaagagccattct 145 |||||||||||||||||||| Sbjct: 73296 agatcatcaagagccattct 73315
>gb|AC182391.3| Pan troglodytes BAC clone CH251-510H16 from chromosome 1, complete sequence Length = 188995 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 agatcatcaagagccattct 145 |||||||||||||||||||| Sbjct: 83758 agatcatcaagagccattct 83739
>gb|AC099785.2| Homo sapiens chromosome 1 clone RP11-435I3, complete sequence Length = 186160 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 ccataactctgcaaagagca 68 |||||||||||||||||||| Sbjct: 84956 ccataactctgcaaagagca 84937
>gb|AC096542.2| Homo sapiens chromosome 1 clone RP11-332L18, complete sequence Length = 189411 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 agatcatcaagagccattct 145 |||||||||||||||||||| Sbjct: 182208 agatcatcaagagccattct 182189
>gb|AC092299.5| Homo sapiens chromosome 19 clone LLNLF-173C4, complete sequence Length = 39524 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 agatcatcaagagccattct 145 |||||||||||||||||||| Sbjct: 8787 agatcatcaagagccattct 8768
>gb|AC159887.2| Mus musculus BAC clone RP24-249O13 from chromosome 9, complete sequence Length = 160241 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 tagatacttctttctttgct 260 |||||||||||||||||||| Sbjct: 14475 tagatacttctttctttgct 14456
>emb|BX649242.6| Zebrafish DNA sequence from clone DKEY-264C3 in linkage group 17, complete sequence Length = 147772 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 gggaagaaaggtgattaagt 100 |||||||||||||||||||| Sbjct: 147121 gggaagaaaggtgattaagt 147102
>gb|AC160246.2| Mus musculus BAC clone RP24-465F1 from chromosome 9, complete sequence Length = 157105 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 tagatacttctttctttgct 260 |||||||||||||||||||| Sbjct: 146392 tagatacttctttctttgct 146373
>gb|AC157652.3| Mus musculus BAC clone RP24-324J2 from chromosome 10, complete sequence Length = 191096 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 gaagaaaggtgattaagtac 102 |||||||||||||||||||| Sbjct: 65753 gaagaaaggtgattaagtac 65772
>gb|AC159738.2| Mus musculus BAC clone RP24-372O2 from chromosome 9, complete sequence Length = 147599 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 ttctttctttgcttcctcaa 267 |||||||||||||||||||| Sbjct: 58583 ttctttctttgcttcctcaa 58602
>gb|AC115287.5| Homo sapiens chromosome 1 clone RP5-870L9, complete sequence Length = 99182 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 agatcatcaagagccattct 145 |||||||||||||||||||| Sbjct: 5404 agatcatcaagagccattct 5385
>gb|AC092192.1|AC092192 Homo sapiens chromosome 19 clone LLNLF-127D1, complete sequence Length = 39041 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 agatcatcaagagccattct 145 |||||||||||||||||||| Sbjct: 36100 agatcatcaagagccattct 36081
>emb|BX571720.6| Zebrafish DNA sequence from clone DKEY-77G5 in linkage group 17, complete sequence Length = 227706 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 gggaagaaaggtgattaagt 100 |||||||||||||||||||| Sbjct: 1349 gggaagaaaggtgattaagt 1330
>gb|AC069287.7| Homo sapiens BAC clone RP11-304M2 from 11, complete sequence Length = 199487 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 agatcatcaagagccattct 145 |||||||||||||||||||| Sbjct: 153531 agatcatcaagagccattct 153550
>gb|AC012005.4|AC012005 Homo sapiens clone RP11-533E23, complete sequence Length = 189557 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 agatcatcaagagccattct 145 |||||||||||||||||||| Sbjct: 108231 agatcatcaagagccattct 108250
>gb|AC158134.8| Mus musculus chromosome 3, clone RP24-384O20, complete sequence Length = 209278 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 tacttctttctttgcttcct 264 |||||||||||||||||||| Sbjct: 800 tacttctttctttgcttcct 819
>gb|AC148307.3| Pan troglodytes BAC clone RP43-44G20 from chromosome 11, complete sequence Length = 199161 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 agatcatcaagagccattct 145 |||||||||||||||||||| Sbjct: 188465 agatcatcaagagccattct 188484
>gb|AC138393.2| Homo sapiens chromosome 1 clone RP11-504P24, complete sequence Length = 184644 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 agatcatcaagagccattct 145 |||||||||||||||||||| Sbjct: 32382 agatcatcaagagccattct 32363
>gb|AC136309.9| Homo sapiens chromosome 11, clone RP11-242C5, complete sequence Length = 150642 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 agatcatcaagagccattct 145 |||||||||||||||||||| Sbjct: 91732 agatcatcaagagccattct 91713
>gb|AC006328.5|AC006328 Homo sapiens BAC clone RP11-102O5 from Y, complete sequence Length = 177769 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 agatcatcaagagccattct 145 |||||||||||||||||||| Sbjct: 32337 agatcatcaagagccattct 32318
>gb|AC005627.2|AC005627 Homo sapiens PAC clone RP4-577P23 from 1, complete sequence Length = 137304 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 agatcatcaagagccattct 145 |||||||||||||||||||| Sbjct: 69125 agatcatcaagagccattct 69144
>ref|NG_004755.1| Homo sapiens chromosome Y palindromes P1, P2, P3 and inverted repeat IR2 (P1-P2-P3-IR2@) on chromosome Y Length = 4538292 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 agatcatcaagagccattct 145 |||||||||||||||||||| Sbjct: 3554688 agatcatcaagagccattct 3554669 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 agatcatcaagagccattct 145 |||||||||||||||||||| Sbjct: 2493682 agatcatcaagagccattct 2493701
>gb|AC005923.2| Homo sapiens 3 PAC RP4-751E10 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 88326 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 305 caaatccttaaatgcagtctcaattttc 332 ||||||||||||| || ||||||||||| Sbjct: 64340 caaatccttaaattcactctcaattttc 64313
>gb|AC131281.7| Homo sapiens chromosome 8, clone RP11-585F1, complete sequence Length = 120139 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 agatcatcaagagccattct 145 |||||||||||||||||||| Sbjct: 31874 agatcatcaagagccattct 31893
>gb|AC110274.5| Homo sapiens chromosome 8, clone RP11-161B15, complete sequence Length = 152802 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 agatcatcaagagccattct 145 |||||||||||||||||||| Sbjct: 99116 agatcatcaagagccattct 99135
>gb|AC138030.1| Homo sapiens chromosome 5 clone XXcos-B22C100, complete sequence Length = 44419 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 agatcatcaagagccattct 145 |||||||||||||||||||| Sbjct: 21028 agatcatcaagagccattct 21047
>gb|AC137933.1| Homo sapiens chromosome 16 clone XXcos-yA11c11, complete sequence Length = 29436 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 agatcatcaagagccattct 145 |||||||||||||||||||| Sbjct: 16212 agatcatcaagagccattct 16231
>ref|NM_001012933.1| Gallus gallus similar to adaptor protein DAPP1 (LOC425211), mRNA Length = 2441 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 412 ctgtgtatacaacatgaaaatgtt 435 |||||||| ||||||||||||||| Sbjct: 279 ctgtgtattcaacatgaaaatgtt 256
>gb|AC114498.2| Homo sapiens chromosome 1 clone RP5-857K21, complete sequence Length = 121664 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 agatcatcaagagccattct 145 |||||||||||||||||||| Sbjct: 118717 agatcatcaagagccattct 118698
>gb|AC134873.2| Homo sapiens cosmid clone XXcos-2003C15 from 2, complete sequence Length = 36966 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 agatcatcaagagccattct 145 |||||||||||||||||||| Sbjct: 19439 agatcatcaagagccattct 19420
>emb|AL671898.7| Mouse DNA sequence from clone RP23-194K1 on chromosome X, complete sequence Length = 212406 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 337 cagatattggaggcagatgt 356 |||||||||||||||||||| Sbjct: 95307 cagatattggaggcagatgt 95288
>dbj|AK000198.1| Homo sapiens cDNA FLJ20191 fis, clone COLF0753 Length = 1764 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 agaagcagaaaaatgaacca 51 |||||||||||||||||||| Sbjct: 1034 agaagcagaaaaatgaacca 1015
>gb|AC004842.2|AC004842 Homo sapiens PAC clone RP4-609N19 from 7p22, complete sequence Length = 120000 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 agatcatcaagagccattct 145 |||||||||||||||||||| Sbjct: 77691 agatcatcaagagccattct 77710
>gb|AC004908.1|AC004908 Homo sapiens PAC clone RP5-855D21, complete sequence Length = 138251 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 agatcatcaagagccattct 145 |||||||||||||||||||| Sbjct: 61801 agatcatcaagagccattct 61782
>emb|AJ277441.1|HSA277441 Homo sapiens partial mRNA for xylosyltransferase I (XT-I gene) Length = 3728 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 agaagcagaaaaatgaacca 51 |||||||||||||||||||| Sbjct: 3076 agaagcagaaaaatgaacca 3057
>emb|BX957237.11| Zebrafish DNA sequence from clone DKEY-22I11 in linkage group 19, complete sequence Length = 73296 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 gggaagaaaggtgattaagt 100 |||||||||||||||||||| Sbjct: 9995 gggaagaaaggtgattaagt 9976
>gb|AC102012.7| Mus musculus chromosome 3, clone RP24-542B2, complete sequence Length = 155366 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 tacttctttctttgcttcct 264 |||||||||||||||||||| Sbjct: 82500 tacttctttctttgcttcct 82519
>dbj|AP006222.1| Homo sapiens genomic DNA, chromosome Un, clone:CMC-68E4, telomere region, complete sequence Length = 40302 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 agatcatcaagagccattct 145 |||||||||||||||||||| Sbjct: 32621 agatcatcaagagccattct 32602
>gb|AC153864.5| Mus musculus 10 BAC RP23-345N8 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 196411 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 acataaacaagggaagaaag 90 |||||||||||||||||||| Sbjct: 136464 acataaacaagggaagaaag 136483
>emb|AL929347.8| Human DNA sequence from clone RP3-433O3 on chromosome 22, complete sequence Length = 128374 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 agatcatcaagagccattct 145 |||||||||||||||||||| Sbjct: 50779 agatcatcaagagccattct 50760
>gb|AF037068.1|AF037068 Drosophila melanogaster putative zinc finger protein mRNA, partial cds Length = 1708 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 ccacaaagatcatcaagagc 139 |||||||||||||||||||| Sbjct: 1451 ccacaaagatcatcaagagc 1470
>emb|AJ539163.1|HSA539163 Homo sapiens mRNA for xylosyltransferase I (XYLT1 gene) Length = 4207 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 agaagcagaaaaatgaacca 51 |||||||||||||||||||| Sbjct: 3557 agaagcagaaaaatgaacca 3538
>gb|AC109446.2| Homo sapiens chromosome 16 clone CTD-2576D5, complete sequence Length = 193519 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 agaagcagaaaaatgaacca 51 |||||||||||||||||||| Sbjct: 65542 agaagcagaaaaatgaacca 65523
>emb|AL928928.4| Zebrafish DNA sequence from clone CH211-127C19, complete sequence Length = 163161 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 gggaagaaaggtgattaagt 100 |||||||||||||||||||| Sbjct: 19577 gggaagaaaggtgattaagt 19596
>gb|DP000020.1| Equus caballus target 1 genomic scaffold Length = 1907055 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 cttcctcaacaagagaacccggaa 282 ||||||||||||||||||| |||| Sbjct: 943997 cttcctcaacaagagaacctggaa 943974
>emb|AL928575.7| Mouse DNA sequence from clone RP23-37A11 on chromosome 2, complete sequence Length = 167375 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 aacatgaaaatgttaatgaa 441 |||||||||||||||||||| Sbjct: 119646 aacatgaaaatgttaatgaa 119665 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,361,537 Number of Sequences: 3902068 Number of extensions: 5361537 Number of successful extensions: 121278 Number of sequences better than 10.0: 105 Number of HSP's better than 10.0 without gapping: 105 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 120996 Number of HSP's gapped (non-prelim): 273 length of query: 461 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 439 effective length of database: 17,147,199,772 effective search space: 7527620699908 effective search space used: 7527620699908 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)