ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd18o19 |
|---|---|
| Clone Library Name | barley_pub |
>XCP1_ARATH (O65493) Xylem cysteine proteinase 1 precursor (EC 3.4.22.-)| (AtXCP1) Length = 355 Score = 41.2 bits (95), Expect = 7e-04 Identities = 18/42 (42%), Positives = 24/42 (57%) Frame = +3 Query: 120 MLGRFHRWMSWHGRTYPSAAEKLRRFEAYRRNVDLIDASNRD 245 +L F WMS H + Y S EK+ RFE +R N+ ID N + Sbjct: 47 LLELFESWMSEHSKAYKSVEEKVHRFEVFRENLMHIDQRNNE 88
>CPR4_ARATH (Q9SUS9) Probable cysteine proteinase At4g11320 precursor (EC| 3.4.22.-) Length = 371 Score = 41.2 bits (95), Expect = 7e-04 Identities = 21/46 (45%), Positives = 26/46 (56%) Frame = +3 Query: 132 FHRWMSWHGRTYPSAAEKLRRFEAYRRNVDLIDASNRDAERLGYEL 269 F WM HG+ Y S AEK RR + N+ I +NR+AE L Y L Sbjct: 56 FESWMVKHGKVYDSVAEKERRLTIFEDNLRFI--TNRNAENLSYRL 99
>BROM1_ANACO (O23791) Bromelain precursor (EC 3.4.22.32) (Allergen Ana c 2)| Length = 351 Score = 41.2 bits (95), Expect = 7e-04 Identities = 17/40 (42%), Positives = 25/40 (62%) Frame = +3 Query: 120 MLGRFHRWMSWHGRTYPSAAEKLRRFEAYRRNVDLIDASN 239 M+ RF WM+ +GR Y EK+RRF+ ++ NV I+ N Sbjct: 33 MMKRFEEWMAEYGRVYKDDDEKMRRFQIFKNNVKHIETFN 72
>CPR3_ARATH (Q9SUT0) Probable cysteine proteinase At4g11310 precursor (EC| 3.4.22.-) Length = 364 Score = 40.8 bits (94), Expect = 0.001 Identities = 21/46 (45%), Positives = 26/46 (56%) Frame = +3 Query: 132 FHRWMSWHGRTYPSAAEKLRRFEAYRRNVDLIDASNRDAERLGYEL 269 F WM HG+ Y S AEK RR + N+ I +NR+AE L Y L Sbjct: 49 FESWMVKHGKVYGSVAEKERRLTIFEDNLRFI--NNRNAENLSYRL 92
>ANAN_ANACO (P80884) Ananain precursor (EC 3.4.22.31)| Length = 345 Score = 37.7 bits (86), Expect = 0.008 Identities = 15/40 (37%), Positives = 25/40 (62%) Frame = +3 Query: 120 MLGRFHRWMSWHGRTYPSAAEKLRRFEAYRRNVDLIDASN 239 M+ +F WM+ +GR Y EK+ RF+ ++ NV+ I+ N Sbjct: 33 MMKQFEEWMAEYGRVYKDNDEKMLRFQIFKNNVNHIETFN 72
>PAPA3_CARPA (P10056) Caricain precursor (EC 3.4.22.30) (Papaya proteinase| omega) (Papaya proteinase III) (PPIII) (Papaya peptidase A) Length = 348 Score = 37.0 bits (84), Expect = 0.013 Identities = 15/37 (40%), Positives = 24/37 (64%) Frame = +3 Query: 132 FHRWMSWHGRTYPSAAEKLRRFEAYRRNVDLIDASNR 242 F+ WM H + Y + EKL RFE ++ N++ ID +N+ Sbjct: 48 FNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNK 84
>PAPA4_CARPA (P05994) Papaya proteinase 4 precursor (EC 3.4.22.25) (Papaya| proteinase IV) (PPIV) (Papaya peptidase B) (Glycyl endopeptidase) Length = 348 Score = 36.6 bits (83), Expect = 0.017 Identities = 15/37 (40%), Positives = 22/37 (59%) Frame = +3 Query: 132 FHRWMSWHGRTYPSAAEKLRRFEAYRRNVDLIDASNR 242 F+ WM H + Y + EKL RFE ++ N+ ID N+ Sbjct: 48 FNSWMLKHNKNYKNVDEKLYRFEIFKDNLKYIDERNK 84
>PAPA2_CARPA (P14080) Chymopapain precursor (EC 3.4.22.6) (Papaya proteinase II)| (PPII) Length = 352 Score = 36.6 bits (83), Expect = 0.017 Identities = 16/37 (43%), Positives = 22/37 (59%) Frame = +3 Query: 132 FHRWMSWHGRTYPSAAEKLRRFEAYRRNVDLIDASNR 242 F WM H + Y S EK+ RFE +R N+ ID +N+ Sbjct: 48 FDSWMLKHNKIYESIDEKIYRFEIFRDNLMYIDETNK 84
>PAPA1_CARPA (P00784) Papain precursor (EC 3.4.22.2) (Papaya proteinase I) (PPI)| (Allergen Car p 1) Length = 345 Score = 35.4 bits (80), Expect = 0.038 Identities = 14/37 (37%), Positives = 22/37 (59%) Frame = +3 Query: 132 FHRWMSWHGRTYPSAAEKLRRFEAYRRNVDLIDASNR 242 F WM H + Y + EK+ RFE ++ N+ ID +N+ Sbjct: 48 FESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNK 84
>ORYA_ORYSA (P25776) Oryzain alpha chain precursor (EC 3.4.22.-)| Length = 458 Score = 34.7 bits (78), Expect = 0.065 Identities = 14/40 (35%), Positives = 24/40 (60%) Frame = +3 Query: 132 FHRWMSWHGRTYPSAAEKLRRFEAYRRNVDLIDASNRDAE 251 + W + HG++Y + E+ RR+ A+R N+ ID N A+ Sbjct: 40 YAEWKAEHGKSYNAVGEEERRYAAFRDNLRYIDEHNAAAD 79
>ORYC_ORYSA (P25778) Oryzain gamma chain precursor (EC 3.4.22.-)| Length = 362 Score = 34.3 bits (77), Expect = 0.085 Identities = 15/38 (39%), Positives = 24/38 (63%) Frame = +3 Query: 129 RFHRWMSWHGRTYPSAAEKLRRFEAYRRNVDLIDASNR 242 RF R+ HG+ Y AAE RRF + +++L+ ++NR Sbjct: 61 RFARFAVRHGKRYGDAAEVQRRFRIFSESLELVRSTNR 98
>ACTN_ACTCH (P00785) Actinidain precursor (EC 3.4.22.14) (Actinidin) (Allergen| Act c 1) Length = 380 Score = 33.9 bits (76), Expect = 0.11 Identities = 14/41 (34%), Positives = 22/41 (53%) Frame = +3 Query: 132 FHRWMSWHGRTYPSAAEKLRRFEAYRRNVDLIDASNRDAER 254 + W+ +G++Y S E RRFE ++ + ID N D R Sbjct: 42 YESWLIKYGKSYNSLGEWERRFEIFKETLRFIDEHNADTNR 82
>CPR2_ARATH (Q9LXW3) Probable cysteine proteinase At3g43960 precursor (EC| 3.4.22.-) Length = 376 Score = 33.9 bits (76), Expect = 0.11 Identities = 14/45 (31%), Positives = 25/45 (55%) Frame = +3 Query: 120 MLGRFHRWMSWHGRTYPSAAEKLRRFEAYRRNVDLIDASNRDAER 254 +L + +W+ +G+ Y EK RRF+ ++ N+ I+ N D R Sbjct: 37 VLTMYEQWLVENGKNYNGLGEKERRFKIFKDNLKRIEEHNSDPNR 81
>XCP2_ARATH (Q9LM66) Xylem cysteine proteinase 2 precursor (EC 3.4.22.-)| (AtXCP2) Length = 356 Score = 33.9 bits (76), Expect = 0.11 Identities = 17/49 (34%), Positives = 27/49 (55%) Frame = +3 Query: 96 DGDHHDLLMLGRFHRWMSWHGRTYPSAAEKLRRFEAYRRNVDLIDASNR 242 D + HD L + F W+S + Y + EK RFE ++ N+ ID +N+ Sbjct: 40 DLESHDKL-IELFENWISNFEKAYETVEEKFLRFEVFKDNLKHIDETNK 87
>UN13D_RAT (Q9R189) Unc-13 homolog D (Munc13-4)| Length = 1088 Score = 33.5 bits (75), Expect = 0.15 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 5/36 (13%) Frame = +3 Query: 102 DHHDLLMLGRFHRWM-----SWHGRTYPSAAEKLRR 194 D H++L L FHRW SW RTY A E+++R Sbjct: 573 DSHEVLALDGFHRWFQSAIPSWLQRTYSVALERVQR 608
>CATV_NPVCF (P41715) Viral cathepsin (EC 3.4.22.50) (V-cath) (Cysteine| proteinase) (CP) Length = 324 Score = 33.1 bits (74), Expect = 0.19 Identities = 15/46 (32%), Positives = 26/46 (56%) Frame = +3 Query: 132 FHRWMSWHGRTYPSAAEKLRRFEAYRRNVDLIDASNRDAERLGYEL 269 F ++ ++Y S +EKLRRF+ +R N++ I N + YE+ Sbjct: 28 FEDFLHKFNKSYSSESEKLRRFQIFRHNLEEIINKNHNDSTAQYEI 73
>CATV_NPVCD (O41479) Viral cathepsin (EC 3.4.22.50) (V-cath) (Cysteine| proteinase) (CP) Length = 324 Score = 33.1 bits (74), Expect = 0.19 Identities = 15/46 (32%), Positives = 26/46 (56%) Frame = +3 Query: 132 FHRWMSWHGRTYPSAAEKLRRFEAYRRNVDLIDASNRDAERLGYEL 269 F ++ ++Y S +EKLRRF+ +R N++ I N + YE+ Sbjct: 28 FEDFLHKFNKSYSSESEKLRRFQIFRHNLEEIINKNHNDSTAQYEI 73
>CYSP2_MAIZE (Q10717) Cysteine proteinase 2 precursor (EC 3.4.22.-)| Length = 360 Score = 32.7 bits (73), Expect = 0.25 Identities = 17/47 (36%), Positives = 29/47 (61%) Frame = +3 Query: 129 RFHRWMSWHGRTYPSAAEKLRRFEAYRRNVDLIDASNRDAERLGYEL 269 RF R+ +G++Y SAAE +RF + ++ L+ ++NR + L Y L Sbjct: 58 RFARFAVRYGKSYESAAEVHKRFRIFSESLQLVRSTNR--KGLSYRL 102
>CATV_NPVAP (Q91CL9) Viral cathepsin (EC 3.4.22.50) (V-cath) (Cysteine| proteinase) (CP) Length = 324 Score = 32.3 bits (72), Expect = 0.32 Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Frame = +3 Query: 99 GDHHDLLML-GRFHRWMSWHGRTYPSAAEKLRRFEAYRRNVDLIDASNRDAERLGYEL 269 G +DLL F ++ + Y S +EKLRRF+ ++ N++ I N++ YE+ Sbjct: 16 GAAYDLLKAPSYFEEFLHKFNKNYSSESEKLRRFKIFQHNLEEIINKNQNDTSAQYEI 73
>ALEU_HORVU (P05167) Thiol protease aleurain precursor (EC 3.4.22.16)| Length = 362 Score = 32.0 bits (71), Expect = 0.42 Identities = 14/38 (36%), Positives = 25/38 (65%) Frame = +3 Query: 129 RFHRWMSWHGRTYPSAAEKLRRFEAYRRNVDLIDASNR 242 RF R+ +G++Y SAAE RRF + +++ + ++NR Sbjct: 60 RFARFAVRYGKSYESAAEVRRRFRIFSESLEEVRSTNR 97
>CATV_NPVHC (Q9WGE0) Viral cathepsin (EC 3.4.22.50) (V-cath) (Cysteine| proteinase) (CP) Length = 324 Score = 30.8 bits (68), Expect = 0.94 Identities = 14/46 (30%), Positives = 26/46 (56%) Frame = +3 Query: 132 FHRWMSWHGRTYPSAAEKLRRFEAYRRNVDLIDASNRDAERLGYEL 269 F ++ + Y S +EKLRRF+ ++ N++ I N++ YE+ Sbjct: 28 FEDFLHKFNKHYSSESEKLRRFQIFQHNLEEIIIKNQNDTTAQYEI 73
>P34_SOYBN (P22895) P34 probable thiol protease precursor (EC 3.4.22.-)| Length = 379 Score = 30.4 bits (67), Expect = 1.2 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = +3 Query: 132 FHRWMSWHGRTYPSAAEKLRRFEAYRRNVDLIDASN 239 F W S HGR Y + E+ +R E ++ N + I N Sbjct: 44 FQLWKSEHGRVYHNHEEEAKRLEIFKNNSNYIRDMN 79
>CYSP_TRYCR (P25779) Cruzipain precursor (EC 3.4.22.51) (Major cysteine| proteinase) (Cruzaine) Length = 467 Score = 30.4 bits (67), Expect = 1.2 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = +3 Query: 105 HHDLLMLGRFHRWMSWHGRTYPSAAEKLRRFEAYRRNVDL 224 H + + +F + HGR Y SAAE+ R +R N+ L Sbjct: 29 HAEETLTSQFAEFKQKHGRVYESAAEEAFRLSVFRENLFL 68
>CATV_NPVOP (O10364) Viral cathepsin (EC 3.4.22.50) (V-cath) (Cysteine| proteinase) (CP) Length = 324 Score = 29.3 bits (64), Expect = 2.7 Identities = 13/46 (28%), Positives = 25/46 (54%) Frame = +3 Query: 132 FHRWMSWHGRTYPSAAEKLRRFEAYRRNVDLIDASNRDAERLGYEL 269 F ++ + Y S +EKL RF+ ++ N++ I N++ YE+ Sbjct: 28 FEDFLHKFNKNYSSESEKLHRFKIFQHNLEEIINKNQNDSTAQYEI 73
>CPR1_ARATH (Q9LT77) Probable cysteine proteinase At3g19400 precursor (EC| 3.4.22.-) Length = 362 Score = 29.3 bits (64), Expect = 2.7 Identities = 11/41 (26%), Positives = 22/41 (53%) Frame = +3 Query: 132 FHRWMSWHGRTYPSAAEKLRRFEAYRRNVDLIDASNRDAER 254 + +W+ + + Y EK RRF+ ++ N+ +D N +R Sbjct: 44 YEQWLVENRKNYNGLGEKERRFKIFKDNLKFVDEHNSVPDR 84
>Y1396_METJA (Q58791) Hypothetical protein MJ1396| Length = 2894 Score = 29.3 bits (64), Expect = 2.7 Identities = 13/43 (30%), Positives = 21/43 (48%) Frame = -2 Query: 254 PLGVPVGGVDEVHVATVRLKPPQLLGGTRIRPAMPRHPSVEPT 126 P P+G +D + V + P + G T + + P PSV+ T Sbjct: 1070 PSTAPLGEIDTTTLKFVNINNPSIFGKTTFQTSTPYPPSVQKT 1112
>CATV_NPVEP (Q91GE3) Viral cathepsin (EC 3.4.22.50) (V-cath) (Cysteine| proteinase) (CP) Length = 323 Score = 28.9 bits (63), Expect = 3.6 Identities = 12/38 (31%), Positives = 23/38 (60%) Frame = +3 Query: 132 FHRWMSWHGRTYPSAAEKLRRFEAYRRNVDLIDASNRD 245 F ++ + + Y S EKLRR++ ++ N++ I NR+ Sbjct: 28 FEEFVRQYNKQYDSEYEKLRRYKIFQHNLNDIITKNRN 65
>SYNE2_HUMAN (Q8WXH0) Nesprin-2 (Nuclear envelope spectrin repeat protein 2)| (Syne-2) (Synaptic nuclear envelope protein 2) (Nucleus and actin connecting element protein) (NUANCE protein) Length = 6885 Score = 28.5 bits (62), Expect = 4.7 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 14/60 (23%) Frame = +3 Query: 129 RFHRWMSWHGRT----------YPSAAEKLRRFEAYRRNV----DLIDASNRDAERLGYE 266 RF W+ RT Y SA E+L+RFEA++R + ++ N+ RL E Sbjct: 6147 RFEDWLKSAERTAACPNSSEVLYTSAKEELKRFEAFQRQIHERLTQLELINKQYRRLARE 6206
>CS120_WHEAT (P46525) Cold-shock protein CS120| Length = 391 Score = 28.5 bits (62), Expect = 4.7 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 2/38 (5%) Frame = -1 Query: 207 GTPQTAAA--SRRHSDTSGHATTSIGGTYPASAGHGGL 100 GTP T + H+ T+ H T + GGTY GH G+ Sbjct: 111 GTPATGGTYGQQGHTGTATHGTPATGGTY-GEQGHTGV 147
>CATV_NPVBM (P41721) Viral cathepsin (EC 3.4.22.50) (V-cath) (Cysteine| proteinase) (CP) Length = 323 Score = 28.1 bits (61), Expect = 6.1 Identities = 14/47 (29%), Positives = 28/47 (59%), Gaps = 1/47 (2%) Frame = +3 Query: 132 FHRWMSWHGRTYPSAAEKLRRFEAYRRNV-DLIDASNRDAERLGYEL 269 F ++ + Y S EKLRRF+ ++ N+ ++I+ + D+ + YE+ Sbjct: 28 FEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIINKNQNDSAK--YEI 72
>DHX15_HUMAN (O43143) Putative pre-mRNA-splicing factor ATP-dependent RNA| helicase DHX15 (EC 3.6.1.-) (DEAH box protein 15) (ATP-dependent RNA helicase #46) Length = 795 Score = 28.1 bits (61), Expect = 6.1 Identities = 13/35 (37%), Positives = 16/35 (45%) Frame = -1 Query: 207 GTPQTAAASRRHSDTSGHATTSIGGTYPASAGHGG 103 G P A+ HS S H+T S + AGH G Sbjct: 73 GLPPLKASHSAHSTHSAHSTHSTHSAHSTHAGHAG 107
>CHD1_MOUSE (P40201) Chromodomain-helicase-DNA-binding protein 1 (EC 3.6.1.-)| (ATP-dependent helicase CHD1) (CHD-1) Length = 1711 Score = 27.7 bits (60), Expect = 8.0 Identities = 12/34 (35%), Positives = 18/34 (52%) Frame = +3 Query: 159 RTYPSAAEKLRRFEAYRRNVDLIDASNRDAERLG 260 ++Y L R +A R+ +L+D S D RLG Sbjct: 1134 KSYKKFGGPLERLDAIARDAELVDKSETDLRRLG 1167
>CHD1_HUMAN (O14646) Chromodomain-helicase-DNA-binding protein 1 (EC 3.6.1.-)| (ATP-dependent helicase CHD1) (CHD-1) Length = 1709 Score = 27.7 bits (60), Expect = 8.0 Identities = 12/34 (35%), Positives = 18/34 (52%) Frame = +3 Query: 159 RTYPSAAEKLRRFEAYRRNVDLIDASNRDAERLG 260 ++Y L R +A R+ +L+D S D RLG Sbjct: 1136 KSYKKFGGPLERLDAIARDAELVDKSETDLRRLG 1169
>CATV_NPVRO (Q8B9D5) Viral cathepsin (EC 3.4.22.50) (V-cath) (Cysteine| proteinase) (CP) Length = 323 Score = 27.7 bits (60), Expect = 8.0 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 1/52 (1%) Frame = +3 Query: 93 VDGDHHDLLMLGR-FHRWMSWHGRTYPSAAEKLRRFEAYRRNVDLIDASNRD 245 V+ +DLL F ++ + Y S EKLRRF+ ++ N++ I N++ Sbjct: 14 VNSAAYDLLKAPNYFEEFVHRFNKDYGSEVEKLRRFKIFQHNLNEIIIKNQN 65
>CATV_NPVAC (P25783) Viral cathepsin (EC 3.4.22.50) (V-cath) (Cysteine| proteinase) (CP) Length = 323 Score = 27.7 bits (60), Expect = 8.0 Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 2/61 (3%) Frame = +3 Query: 93 VDGDHHDLLMLGR-FHRWMSWHGRTYPSAAEKLRRFEAYRRNV-DLIDASNRDAERLGYE 266 V+ +DLL F ++ + Y S EKLRRF+ ++ N+ ++I+ + D+ + YE Sbjct: 14 VNSAAYDLLKAPNYFEEFVHRFNKDYGSEVEKLRRFKIFQHNLNEIINKNQNDSAK--YE 71 Query: 267 L 269 + Sbjct: 72 I 72
>5E5_RAT (Q63003) 5E5 antigen| Length = 825 Score = 27.7 bits (60), Expect = 8.0 Identities = 23/65 (35%), Positives = 28/65 (43%) Frame = -1 Query: 201 PQTAAASRRHSDTSGHATTSIGGTYPASAGHGGLHRRT*NGRKVMWCWTERLGGRGEATS 22 P A A H+ HA + G PA+A GG GR+ W R GG G + Sbjct: 539 PALAGAPTAHA----HA---VPGPGPAAATLGG------RGRRGSWRGGRRGGGAGASGG 585 Query: 21 GRGPR 7 GRG R Sbjct: 586 GRGGR 590 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 34,980,574 Number of Sequences: 219361 Number of extensions: 620467 Number of successful extensions: 2270 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 2208 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2269 length of database: 80,573,946 effective HSP length: 65 effective length of database: 66,315,481 effective search space used: 1591571544 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
