ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd18o09 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_463690.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1371 Score = 739 bits (373), Expect = 0.0 Identities = 557/619 (89%) Strand = Plus / Plus Query: 4 tggaaggagcggatcagcgttccggtgatcatttcccttgcaaaggggatagaagcctcc 63 ||||||||||||||||||||||||||||| || || || ||||||||||||||||| ||| Sbjct: 526 tggaaggagcggatcagcgttccggtgataatctcgctcgcaaaggggatagaagcatcc 585 Query: 64 ttggacccaattcctcgtatcatcacgcctacacaaatgatcagctctgcagctggcgtt 123 ||||||||||||||||||||||| ||||| || || ||||| || |||||| |||| ||| Sbjct: 586 ttggacccaattcctcgtatcattacgcccacgcagatgattagttctgcaactggagtt 645 Query: 124 ccaactgagaatatactctatcttggaggcccaaacattgcctcagaaatttatnacaag 183 ||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||| Sbjct: 646 ccaactgagaatatactatatcttggaggcccaaacattgcctcagagatttataacaaa 705 Query: 184 gaatatgcaaatgctcgaatctgcggatccaccaagtggaggaaacctcttgctaagttt 243 ||||||||||||||||||||||| || |||| |||||||||||||||||| ||||||||| Sbjct: 706 gaatatgcaaatgctcgaatctgtgggtccaacaagtggaggaaacctctcgctaagttt 765 Query: 244 cttagacaaccgcatttcattgtttgggataacagtgacattgttactcatgaggttatg 303 || |||||||| ||||||||||| |||||||||||||| ||||||| |||||||| ||| Sbjct: 766 ctgagacaaccacatttcattgtctgggataacagtgatcttgttacacatgaggtgatg 825 Query: 304 ggtggcctgaagaatgtatatgctattggtgctggaatggtggcagctttaacaaacgag 363 ||||| |||||||||| || || || |||||||||||||| ||||||||||| || ||| Sbjct: 826 ggtggtttgaagaatgtctacgccatcggtgctggaatggttgcagctttaactaatgag 885 Query: 364 agtgcaacaagcaaatcagtgtattttgctcactgcacgtcagagatgatattcattacc 423 |||||||||||||| || |||||||||||||| |||||||||||||||||||||||||| Sbjct: 886 agtgcaacaagcaagtcggtgtattttgctcattgcacgtcagagatgatattcattact 945 Query: 424 catctactgacagaacagccagagaaacttgccggccctctgctggctgatacttatgta 483 ||| | || |||||||| || ||||||||||| |||||||||||||||||||||||||| Sbjct: 946 catttgctcacagaacaacctgagaaacttgctggccctctgctggctgatacttatgtt 1005 Query: 484 actctcctaaaaggtcgcaatgcatggtatgggcaaatgctagcgaagggagaactcagg 543 |||||||| |||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 1006 actctcctgaaaggtcgcaatgcgtggtatgggcaaatgctagcgaagggagaactgagc 1065 Query: 544 ctcgatatgggtgacagtatcaaaggaaaggggatgattcagggtatttctgctgttggn 603 | || ||||| ||||| ||||| || |||||||||||||||||||| ||||||||||| Sbjct: 1066 cctgacatgggcgacagcatcaaggggaaggggatgattcagggtatctctgctgttggt 1125 Query: 604 gcattttttgagctgctca 622 |||||||||||||| |||| Sbjct: 1126 gcattttttgagcttctca 1144
>dbj|AK068569.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154E21, full insert sequence Length = 2080 Score = 739 bits (373), Expect = 0.0 Identities = 557/619 (89%) Strand = Plus / Plus Query: 4 tggaaggagcggatcagcgttccggtgatcatttcccttgcaaaggggatagaagcctcc 63 ||||||||||||||||||||||||||||| || || || ||||||||||||||||| ||| Sbjct: 1009 tggaaggagcggatcagcgttccggtgataatctcgctcgcaaaggggatagaagcatcc 1068 Query: 64 ttggacccaattcctcgtatcatcacgcctacacaaatgatcagctctgcagctggcgtt 123 ||||||||||||||||||||||| ||||| || || ||||| || |||||| |||| ||| Sbjct: 1069 ttggacccaattcctcgtatcattacgcccacgcagatgattagttctgcaactggagtt 1128 Query: 124 ccaactgagaatatactctatcttggaggcccaaacattgcctcagaaatttatnacaag 183 ||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||| Sbjct: 1129 ccaactgagaatatactatatcttggaggcccaaacattgcctcagagatttataacaaa 1188 Query: 184 gaatatgcaaatgctcgaatctgcggatccaccaagtggaggaaacctcttgctaagttt 243 ||||||||||||||||||||||| || |||| |||||||||||||||||| ||||||||| Sbjct: 1189 gaatatgcaaatgctcgaatctgtgggtccaacaagtggaggaaacctctcgctaagttt 1248 Query: 244 cttagacaaccgcatttcattgtttgggataacagtgacattgttactcatgaggttatg 303 || |||||||| ||||||||||| |||||||||||||| ||||||| |||||||| ||| Sbjct: 1249 ctgagacaaccacatttcattgtctgggataacagtgatcttgttacacatgaggtgatg 1308 Query: 304 ggtggcctgaagaatgtatatgctattggtgctggaatggtggcagctttaacaaacgag 363 ||||| |||||||||| || || || |||||||||||||| ||||||||||| || ||| Sbjct: 1309 ggtggtttgaagaatgtctacgccatcggtgctggaatggttgcagctttaactaatgag 1368 Query: 364 agtgcaacaagcaaatcagtgtattttgctcactgcacgtcagagatgatattcattacc 423 |||||||||||||| || |||||||||||||| |||||||||||||||||||||||||| Sbjct: 1369 agtgcaacaagcaagtcggtgtattttgctcattgcacgtcagagatgatattcattact 1428 Query: 424 catctactgacagaacagccagagaaacttgccggccctctgctggctgatacttatgta 483 ||| | || |||||||| || ||||||||||| |||||||||||||||||||||||||| Sbjct: 1429 catttgctcacagaacaacctgagaaacttgctggccctctgctggctgatacttatgtt 1488 Query: 484 actctcctaaaaggtcgcaatgcatggtatgggcaaatgctagcgaagggagaactcagg 543 |||||||| |||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 1489 actctcctgaaaggtcgcaatgcgtggtatgggcaaatgctagcgaagggagaactgagc 1548 Query: 544 ctcgatatgggtgacagtatcaaaggaaaggggatgattcagggtatttctgctgttggn 603 | || ||||| ||||| ||||| || |||||||||||||||||||| ||||||||||| Sbjct: 1549 cctgacatgggcgacagcatcaaggggaaggggatgattcagggtatctctgctgttggt 1608 Query: 604 gcattttttgagctgctca 622 |||||||||||||| |||| Sbjct: 1609 gcattttttgagcttctca 1627
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 297 bits (150), Expect = 2e-77 Identities = 225/250 (90%) Strand = Plus / Plus Query: 337 ggaatggtggcagctttaacaaacgagagtgcaacaagcaaatcagtgtattttgctcac 396 |||||||| ||||||||||| || ||||||||||||||||| || |||||||||||||| Sbjct: 41240908 ggaatggttgcagctttaactaatgagagtgcaacaagcaagtcggtgtattttgctcat 41240967 Query: 397 tgcacgtcagagatgatattcattacccatctactgacagaacagccagagaaacttgcc 456 |||||||||||||||||||||||||| ||| | || |||||||| || ||||||||||| Sbjct: 41240968 tgcacgtcagagatgatattcattactcatttgctcacagaacaacctgagaaacttgct 41241027 Query: 457 ggccctctgctggctgatacttatgtaactctcctaaaaggtcgcaatgcatggtatggg 516 |||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||| Sbjct: 41241028 ggccctctgctggctgatacttatgttactctcctgaaaggtcgcaatgcgtggtatggg 41241087 Query: 517 caaatgctagcgaagggagaactcaggctcgatatgggtgacagtatcaaaggaaagggg 576 ||||||||||||||||||||||| || | || ||||| ||||| ||||| || |||||| Sbjct: 41241088 caaatgctagcgaagggagaactgagccctgacatgggcgacagcatcaaggggaagggg 41241147 Query: 577 atgattcagg 586 |||||||||| Sbjct: 41241148 atgattcagg 41241157 Score = 280 bits (141), Expect = 5e-72 Identities = 206/228 (90%) Strand = Plus / Plus Query: 111 tgcagctggcgttccaactgagaatatactctatcttggaggcccaaacattgcctcaga 170 ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 41240071 tgcagctggagttccaactgagaatatactatatcttggaggcccaaacattgcctcaga 41240130 Query: 171 aatttatnacaaggaatatgcaaatgctcgaatctgcggatccaccaagtggaggaaacc 230 |||||| |||| ||||||||||||||||||||||| || |||| ||||||||||||||| Sbjct: 41240131 gatttataacaaagaatatgcaaatgctcgaatctgtgggtccaacaagtggaggaaacc 41240190 Query: 231 tcttgctaagtttcttagacaaccgcatttcattgtttgggataacagtgacattgttac 290 ||| ||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||| Sbjct: 41240191 tctcgctaagtttctgagacaaccacatttcattgtctgggataacagtgatcttgttac 41240250 Query: 291 tcatgaggttatgggtggcctgaagaatgtatatgctattggtgctgg 338 |||||||| |||||||| |||||||||| || || || |||||||| Sbjct: 41240251 acatgaggtgatgggtggtttgaagaatgtctacgccatcggtgctgg 41240298 Score = 133 bits (67), Expect = 8e-28 Identities = 100/111 (90%) Strand = Plus / Plus Query: 4 tggaaggagcggatcagcgttccggtgatcatttcccttgcaaaggggatagaagcctcc 63 ||||||||||||||||||||||||||||| || || || ||||||||||||||||| ||| Sbjct: 41239035 tggaaggagcggatcagcgttccggtgataatctcgctcgcaaaggggatagaagcatcc 41239094 Query: 64 ttggacccaattcctcgtatcatcacgcctacacaaatgatcagctctgca 114 ||||||||||||||||||||||| ||||| || || ||||| || |||||| Sbjct: 41239095 ttggacccaattcctcgtatcattacgcccacgcagatgattagttctgca 41239145 Score = 93.7 bits (47), Expect = 7e-16 Identities = 157/194 (80%) Strand = Plus / Minus Query: 142 tatcttggaggcccaaacattgcctcagaaatttatnacaaggaatatgcaaatgctcga 201 |||||||||||||| |||||||| ||||||||||| | || ||||||||||||||||| Sbjct: 33947550 tatcttggaggccctaacattgcttcagaaatttacaataaagaatatgcaaatgctcgt 33947491 Query: 202 atctgcggatccaccaagtggaggaaacctcttgctaagtttcttagacaaccgcatttc 261 || || ||| | ||| ||||| |||||||||||||| ||| | || || || ||||| Sbjct: 33947490 atatgtggagctgacaaatggagaaaacctcttgctaaatttttgaggcagcctcatttt 33947431 Query: 262 attgtttgggataacagtgacattgttactcatgaggttatgggtggcctgaagaatgta 321 ||||| |||||||| ||||| | |||| ||||| || ||||| || |||| ||||| Sbjct: 33947430 attgtatgggataatagtgatctcattacacatgaagtcatgggaggtttgaaaaatgtg 33947371 Query: 322 tatgctattggtgc 335 ||||| |||||||| Sbjct: 33947370 tatgccattggtgc 33947357 Score = 69.9 bits (35), Expect = 9e-09 Identities = 143/179 (79%) Strand = Plus / Minus Query: 340 atggtggcagctttaacaaacgagagtgcaacaagcaaatcagtgtattttgctcactgc 399 |||||||||||| ||||||| ||||||||||| |||||||| || || ||||||| ||| Sbjct: 33946993 atggtggcagctctaacaaatgagagtgcaaccagcaaatccgtttactttgctctttgc 33946934 Query: 400 acgtcagagatgatattcattacccatctactgacagaacagccagagaaacttgccggc 459 || || || ||||| | ||| ||||| || || |||| |||| || |||||||| || Sbjct: 33946933 acatctgaaatgatttacataacccaccttttggaagaagagcctgaaaaacttgctggg 33946874 Query: 460 cctctgctggctgatacttatgtaactctcctaaaaggtcgcaatgcatggtatgggca 518 || | ||||||| |||||||| || | || || ||||| ||||||||||||||||| Sbjct: 33946873 ccattattggctgacacttatgtcacattgctgaagggtcgtaatgcatggtatgggca 33946815 Score = 58.0 bits (29), Expect = 4e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 583 cagggtatttctgctgttggngcattttttgagctgctca 622 |||||||| ||||||||||| |||||||||||||| |||| Sbjct: 41241293 cagggtatctctgctgttggtgcattttttgagcttctca 41241332 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 aacctcttgctaagtttctt 246 |||||||||||||||||||| Sbjct: 18130816 aacctcttgctaagtttctt 18130835
>dbj|AP003412.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1150F11 Length = 130355 Score = 297 bits (150), Expect = 2e-77 Identities = 225/250 (90%) Strand = Plus / Plus Query: 337 ggaatggtggcagctttaacaaacgagagtgcaacaagcaaatcagtgtattttgctcac 396 |||||||| ||||||||||| || ||||||||||||||||| || |||||||||||||| Sbjct: 57823 ggaatggttgcagctttaactaatgagagtgcaacaagcaagtcggtgtattttgctcat 57882 Query: 397 tgcacgtcagagatgatattcattacccatctactgacagaacagccagagaaacttgcc 456 |||||||||||||||||||||||||| ||| | || |||||||| || ||||||||||| Sbjct: 57883 tgcacgtcagagatgatattcattactcatttgctcacagaacaacctgagaaacttgct 57942 Query: 457 ggccctctgctggctgatacttatgtaactctcctaaaaggtcgcaatgcatggtatggg 516 |||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||| Sbjct: 57943 ggccctctgctggctgatacttatgttactctcctgaaaggtcgcaatgcgtggtatggg 58002 Query: 517 caaatgctagcgaagggagaactcaggctcgatatgggtgacagtatcaaaggaaagggg 576 ||||||||||||||||||||||| || | || ||||| ||||| ||||| || |||||| Sbjct: 58003 caaatgctagcgaagggagaactgagccctgacatgggcgacagcatcaaggggaagggg 58062 Query: 577 atgattcagg 586 |||||||||| Sbjct: 58063 atgattcagg 58072 Score = 280 bits (141), Expect = 5e-72 Identities = 206/228 (90%) Strand = Plus / Plus Query: 111 tgcagctggcgttccaactgagaatatactctatcttggaggcccaaacattgcctcaga 170 ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 56986 tgcagctggagttccaactgagaatatactatatcttggaggcccaaacattgcctcaga 57045 Query: 171 aatttatnacaaggaatatgcaaatgctcgaatctgcggatccaccaagtggaggaaacc 230 |||||| |||| ||||||||||||||||||||||| || |||| ||||||||||||||| Sbjct: 57046 gatttataacaaagaatatgcaaatgctcgaatctgtgggtccaacaagtggaggaaacc 57105 Query: 231 tcttgctaagtttcttagacaaccgcatttcattgtttgggataacagtgacattgttac 290 ||| ||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||| Sbjct: 57106 tctcgctaagtttctgagacaaccacatttcattgtctgggataacagtgatcttgttac 57165 Query: 291 tcatgaggttatgggtggcctgaagaatgtatatgctattggtgctgg 338 |||||||| |||||||| |||||||||| || || || |||||||| Sbjct: 57166 acatgaggtgatgggtggtttgaagaatgtctacgccatcggtgctgg 57213 Score = 133 bits (67), Expect = 8e-28 Identities = 100/111 (90%) Strand = Plus / Plus Query: 4 tggaaggagcggatcagcgttccggtgatcatttcccttgcaaaggggatagaagcctcc 63 ||||||||||||||||||||||||||||| || || || ||||||||||||||||| ||| Sbjct: 55950 tggaaggagcggatcagcgttccggtgataatctcgctcgcaaaggggatagaagcatcc 56009 Query: 64 ttggacccaattcctcgtatcatcacgcctacacaaatgatcagctctgca 114 ||||||||||||||||||||||| ||||| || || ||||| || |||||| Sbjct: 56010 ttggacccaattcctcgtatcattacgcccacgcagatgattagttctgca 56060 Score = 58.0 bits (29), Expect = 4e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 583 cagggtatttctgctgttggngcattttttgagctgctca 622 |||||||| ||||||||||| |||||||||||||| |||| Sbjct: 58208 cagggtatctctgctgttggtgcattttttgagcttctca 58247
>dbj|AP003269.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0504E02 Length = 137468 Score = 280 bits (141), Expect = 5e-72 Identities = 206/228 (90%) Strand = Plus / Plus Query: 111 tgcagctggcgttccaactgagaatatactctatcttggaggcccaaacattgcctcaga 170 ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 137126 tgcagctggagttccaactgagaatatactatatcttggaggcccaaacattgcctcaga 137185 Query: 171 aatttatnacaaggaatatgcaaatgctcgaatctgcggatccaccaagtggaggaaacc 230 |||||| |||| ||||||||||||||||||||||| || |||| ||||||||||||||| Sbjct: 137186 gatttataacaaagaatatgcaaatgctcgaatctgtgggtccaacaagtggaggaaacc 137245 Query: 231 tcttgctaagtttcttagacaaccgcatttcattgtttgggataacagtgacattgttac 290 ||| ||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||| Sbjct: 137246 tctcgctaagtttctgagacaaccacatttcattgtctgggataacagtgatcttgttac 137305 Query: 291 tcatgaggttatgggtggcctgaagaatgtatatgctattggtgctgg 338 |||||||| |||||||| |||||||||| || || || |||||||| Sbjct: 137306 acatgaggtgatgggtggtttgaagaatgtctacgccatcggtgctgg 137353 Score = 133 bits (67), Expect = 8e-28 Identities = 100/111 (90%) Strand = Plus / Plus Query: 4 tggaaggagcggatcagcgttccggtgatcatttcccttgcaaaggggatagaagcctcc 63 ||||||||||||||||||||||||||||| || || || ||||||||||||||||| ||| Sbjct: 136090 tggaaggagcggatcagcgttccggtgataatctcgctcgcaaaggggatagaagcatcc 136149 Query: 64 ttggacccaattcctcgtatcatcacgcctacacaaatgatcagctctgca 114 ||||||||||||||||||||||| ||||| || || ||||| || |||||| Sbjct: 136150 ttggacccaattcctcgtatcattacgcccacgcagatgattagttctgca 136200
>dbj|AK101484.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041G24, full insert sequence Length = 2029 Score = 178 bits (90), Expect = 1e-41 Identities = 341/425 (80%) Strand = Plus / Plus Query: 94 acacaaatgatcagctctgcagctggcgttccaactgagaatatactctatcttggaggc 153 ||||| ||||||||| |||| |||| |||||| |||||||| || ||||||||||| Sbjct: 1083 acacagatgatcagcaatgcaactggagttccattggagaatattctatatcttggaggt 1142 Query: 154 ccaaacattgcctcagaaatttatnacaaggaatatgcaaatgctcgaatctgcggatcc 213 || |||||||| || || || ||| |||| ||||||||||||||||| || || ||| | Sbjct: 1143 cctaacattgcatctgagatatataacaaagaatatgcaaatgctcgcatatgtggagct 1202 Query: 214 accaagtggaggaaacctcttgctaagtttcttagacaaccgcatttcattgtttgggat 273 ||||||||| |||||||| ||||| ||||| || || || ||||| ||||| |||||| Sbjct: 1203 gacaagtggagaaaacctctagctaaatttctgaggcagcctcattttattgtgtgggat 1262 Query: 274 aacagtgacattgttactcatgaggttatgggtggcctgaagaatgtatatgctattggt 333 || ||||| | | |||||||| || ||||| ||| | ||||| ||||||| |||||| Sbjct: 1263 aatagtgatctcatcactcatgaagtaatgggcggcttaaagaacatatatgccattggt 1322 Query: 334 gctggaatggtggcagctttaacaaacgagagtgcaacaagcaaatcagtgtattttgct 393 ||||| |||||||| || |||| || ||||||||||| |||||||| || || ||| | Sbjct: 1323 gctggtatggtggctgcactaaccaatgagagtgcaaccagcaaatcggtttacttttca 1382 Query: 394 cactgcacgtcagagatgatattcattacccatctactgacagaacagccagagaaactt 453 | |||||||| || ||||||| ||| |||||||| || | ||| | || ||||||||| Sbjct: 1383 ctttgcacgtctgaaatgatatacatcacccatctcctagccgaagaccctgagaaactt 1442 Query: 454 gccggccctctgctggctgatacttatgtaactctcctaaaaggtcgcaatgcatggtat 513 ||||| ||| | | || ||||| |||||||| || || |||||||| |||||||||||| Sbjct: 1443 gccgggcctttattagccgatacctatgtaacactgctgaaaggtcgtaatgcatggtat 1502 Query: 514 gggca 518 ||||| Sbjct: 1503 gggca 1507
>ref|NM_129717.3| Arabidopsis thaliana glycerol-3-phosphate dehydrogenase (NAD+) AT2G41540 transcript variant AT2G41540.1 mRNA, complete cds Length = 2712 Score = 176 bits (89), Expect = 6e-41 Identities = 316/392 (80%) Strand = Plus / Plus Query: 142 tatcttggaggcccaaacattgcctcagaaatttatnacaaggaatatgcaaatgctcga 201 |||||||| || ||||||||||| | |||||||| ||||||||||||| |||||| || Sbjct: 837 tatcttggtggaccaaacattgctgctgaaatttacaacaaggaatatgccaatgctaga 896 Query: 202 atctgcggatccaccaagtggaggaaacctcttgctaagtttcttagacaaccgcatttc 261 ||||| ||| | | || |||||||| || || |||||||| | |||||||| |||||| Sbjct: 897 atctgtggagctgctaaatggaggaagccactagctaagttcttaagacaacctcatttc 956 Query: 262 attgtttgggataacagtgacattgttactcatgaggttatgggtggcctgaagaatgta 321 ||||||||||| || ||||| |||| || ||||| || ||||| || || |||||||| Sbjct: 957 attgtttgggacaatagtgatcttgtgacacatgaagtaatgggaggtctcaagaatgtc 1016 Query: 322 tatgctattggtgctggaatggtggcagctttaacaaacgagagtgcaacaagcaaatca 381 || || ||||| ||||| ||||| || || | || |||||||| || |||||||| || Sbjct: 1017 tacgccattggagctggtatggtagcggcgctcactaacgagagcgctacaagcaagtcg 1076 Query: 382 gtgtattttgctcactgcacgtcagagatgatattcattacccatctactgacagaacag 441 |||||||||||||| || || || ||||||||||| || || ||| |||| ||||| || Sbjct: 1077 gtgtattttgctcattgtacatctgagatgatatttataactcatttactagcagaagag 1136 Query: 442 ccagagaaacttgccggccctctgctggctgatacttatgtaactctcctaaaaggtcgc 501 || ||||||||||| || ||| |||| ||||| |||||||| || | ||||||| || Sbjct: 1137 cctgagaaacttgcagggcctttgctagctgacacttatgtgaccttattaaaaggacgt 1196 Query: 502 aatgcatggtatgggcaaatgctagcgaaggg 533 ||||||||||| || |||||||| || ||||| Sbjct: 1197 aatgcatggtacggtcaaatgctggcaaaggg 1228
>ref|NM_001036448.1| Arabidopsis thaliana glycerol-3-phosphate dehydrogenase (NAD+) AT2G41540 transcript variant AT2G41540.3 mRNA, complete cds Length = 2771 Score = 176 bits (89), Expect = 6e-41 Identities = 316/392 (80%) Strand = Plus / Plus Query: 142 tatcttggaggcccaaacattgcctcagaaatttatnacaaggaatatgcaaatgctcga 201 |||||||| || ||||||||||| | |||||||| ||||||||||||| |||||| || Sbjct: 933 tatcttggtggaccaaacattgctgctgaaatttacaacaaggaatatgccaatgctaga 992 Query: 202 atctgcggatccaccaagtggaggaaacctcttgctaagtttcttagacaaccgcatttc 261 ||||| ||| | | || |||||||| || || |||||||| | |||||||| |||||| Sbjct: 993 atctgtggagctgctaaatggaggaagccactagctaagttcttaagacaacctcatttc 1052 Query: 262 attgtttgggataacagtgacattgttactcatgaggttatgggtggcctgaagaatgta 321 ||||||||||| || ||||| |||| || ||||| || ||||| || || |||||||| Sbjct: 1053 attgtttgggacaatagtgatcttgtgacacatgaagtaatgggaggtctcaagaatgtc 1112 Query: 322 tatgctattggtgctggaatggtggcagctttaacaaacgagagtgcaacaagcaaatca 381 || || ||||| ||||| ||||| || || | || |||||||| || |||||||| || Sbjct: 1113 tacgccattggagctggtatggtagcggcgctcactaacgagagcgctacaagcaagtcg 1172 Query: 382 gtgtattttgctcactgcacgtcagagatgatattcattacccatctactgacagaacag 441 |||||||||||||| || || || ||||||||||| || || ||| |||| ||||| || Sbjct: 1173 gtgtattttgctcattgtacatctgagatgatatttataactcatttactagcagaagag 1232 Query: 442 ccagagaaacttgccggccctctgctggctgatacttatgtaactctcctaaaaggtcgc 501 || ||||||||||| || ||| |||| ||||| |||||||| || | ||||||| || Sbjct: 1233 cctgagaaacttgcagggcctttgctagctgacacttatgtgaccttattaaaaggacgt 1292 Query: 502 aatgcatggtatgggcaaatgctagcgaaggg 533 ||||||||||| || |||||||| || ||||| Sbjct: 1293 aatgcatggtacggtcaaatgctggcaaaggg 1324
>ref|NM_180021.2| Arabidopsis thaliana glycerol-3-phosphate dehydrogenase (NAD+) AT2G41540 transcript variant AT2G41540.2 mRNA, complete cds Length = 3028 Score = 176 bits (89), Expect = 6e-41 Identities = 316/392 (80%) Strand = Plus / Plus Query: 142 tatcttggaggcccaaacattgcctcagaaatttatnacaaggaatatgcaaatgctcga 201 |||||||| || ||||||||||| | |||||||| ||||||||||||| |||||| || Sbjct: 1153 tatcttggtggaccaaacattgctgctgaaatttacaacaaggaatatgccaatgctaga 1212 Query: 202 atctgcggatccaccaagtggaggaaacctcttgctaagtttcttagacaaccgcatttc 261 ||||| ||| | | || |||||||| || || |||||||| | |||||||| |||||| Sbjct: 1213 atctgtggagctgctaaatggaggaagccactagctaagttcttaagacaacctcatttc 1272 Query: 262 attgtttgggataacagtgacattgttactcatgaggttatgggtggcctgaagaatgta 321 ||||||||||| || ||||| |||| || ||||| || ||||| || || |||||||| Sbjct: 1273 attgtttgggacaatagtgatcttgtgacacatgaagtaatgggaggtctcaagaatgtc 1332 Query: 322 tatgctattggtgctggaatggtggcagctttaacaaacgagagtgcaacaagcaaatca 381 || || ||||| ||||| ||||| || || | || |||||||| || |||||||| || Sbjct: 1333 tacgccattggagctggtatggtagcggcgctcactaacgagagcgctacaagcaagtcg 1392 Query: 382 gtgtattttgctcactgcacgtcagagatgatattcattacccatctactgacagaacag 441 |||||||||||||| || || || ||||||||||| || || ||| |||| ||||| || Sbjct: 1393 gtgtattttgctcattgtacatctgagatgatatttataactcatttactagcagaagag 1452 Query: 442 ccagagaaacttgccggccctctgctggctgatacttatgtaactctcctaaaaggtcgc 501 || ||||||||||| || ||| |||| ||||| |||||||| || | ||||||| || Sbjct: 1453 cctgagaaacttgcagggcctttgctagctgacacttatgtgaccttattaaaaggacgt 1512 Query: 502 aatgcatggtatgggcaaatgctagcgaaggg 533 ||||||||||| || |||||||| || ||||| Sbjct: 1513 aatgcatggtacggtcaaatgctggcaaaggg 1544
>gb|AY091247.1| Arabidopsis thaliana putative glycerol-3-phosphate dehydrogenase (At2g41540) mRNA, complete cds Length = 1420 Score = 176 bits (89), Expect = 6e-41 Identities = 316/392 (80%) Strand = Plus / Plus Query: 142 tatcttggaggcccaaacattgcctcagaaatttatnacaaggaatatgcaaatgctcga 201 |||||||| || ||||||||||| | |||||||| ||||||||||||| |||||| || Sbjct: 682 tatcttggtggaccaaacattgctgctgaaatttacaacaaggaatatgccaatgctaga 741 Query: 202 atctgcggatccaccaagtggaggaaacctcttgctaagtttcttagacaaccgcatttc 261 ||||| ||| | | || |||||||| || || |||||||| | |||||||| |||||| Sbjct: 742 atctgtggagctgctaaatggaggaagccactagctaagttcttaagacaacctcatttc 801 Query: 262 attgtttgggataacagtgacattgttactcatgaggttatgggtggcctgaagaatgta 321 ||||||||||| || ||||| |||| || ||||| || ||||| || || |||||||| Sbjct: 802 attgtttgggacaatagtgatcttgtgacacatgaagtaatgggaggtctcaagaatgtc 861 Query: 322 tatgctattggtgctggaatggtggcagctttaacaaacgagagtgcaacaagcaaatca 381 || || ||||| ||||| ||||| || || | || |||||||| || |||||||| || Sbjct: 862 tacgccattggagctggtatggtagcggcgctcactaacgagagcgctacaagcaagtcg 921 Query: 382 gtgtattttgctcactgcacgtcagagatgatattcattacccatctactgacagaacag 441 |||||||||||||| || || || ||||||||||| || || ||| |||| ||||| || Sbjct: 922 gtgtattttgctcattgtacatctgagatgatatttataactcatttactagcagaagag 981 Query: 442 ccagagaaacttgccggccctctgctggctgatacttatgtaactctcctaaaaggtcgc 501 || ||||||||||| || ||| |||| ||||| |||||||| || | ||||||| || Sbjct: 982 cctgagaaacttgcagggcctttgctagctgacacttatgtgaccttattaaaaggacgt 1041 Query: 502 aatgcatggtatgggcaaatgctagcgaaggg 533 ||||||||||| || |||||||| || ||||| Sbjct: 1042 aatgcatggtacggtcaaatgctggcaaaggg 1073
>gb|AY063920.1| Arabidopsis thaliana putative glycerol-3-phosphate dehydrogenase (At2g41540) mRNA, complete cds Length = 2023 Score = 176 bits (89), Expect = 6e-41 Identities = 316/392 (80%) Strand = Plus / Plus Query: 142 tatcttggaggcccaaacattgcctcagaaatttatnacaaggaatatgcaaatgctcga 201 |||||||| || ||||||||||| | |||||||| ||||||||||||| |||||| || Sbjct: 1091 tatcttggtggaccaaacattgctgctgaaatttacaacaaggaatatgccaatgctaga 1150 Query: 202 atctgcggatccaccaagtggaggaaacctcttgctaagtttcttagacaaccgcatttc 261 ||||| ||| | | || |||||||| || || |||||||| | |||||||| |||||| Sbjct: 1151 atctgtggagctgctaaatggaggaagccactagctaagttcttaagacaacctcatttc 1210 Query: 262 attgtttgggataacagtgacattgttactcatgaggttatgggtggcctgaagaatgta 321 ||||||||||| || ||||| |||| || ||||| || ||||| || || |||||||| Sbjct: 1211 attgtttgggacaatagtgatcttgtgacacatgaagtaatgggaggtctcaagaatgtc 1270 Query: 322 tatgctattggtgctggaatggtggcagctttaacaaacgagagtgcaacaagcaaatca 381 || || ||||| ||||| ||||| || || | || |||||||| || |||||||| || Sbjct: 1271 tacgccattggagctggtatggtagcggcgctcactaacgagagcgctacaagcaagtcg 1330 Query: 382 gtgtattttgctcactgcacgtcagagatgatattcattacccatctactgacagaacag 441 |||||||||||||| || || || ||||||||||| || || ||| |||| ||||| || Sbjct: 1331 gtgtattttgctcattgtacatctgagatgatatttataactcatttactagcagaagag 1390 Query: 442 ccagagaaacttgccggccctctgctggctgatacttatgtaactctcctaaaaggtcgc 501 || ||||||||||| || ||| |||| ||||| |||||||| || | ||||||| || Sbjct: 1391 cctgagaaacttgcagggcctttgctagctgacacttatgtgaccttattaaaaggacgt 1450 Query: 502 aatgcatggtatgggcaaatgctagcgaaggg 533 ||||||||||| || |||||||| || ||||| Sbjct: 1451 aatgcatggtacggtcaaatgctggcaaaggg 1482
>emb|AJ347019.1|ATH347019 Arabidopsis thaliana mRNA for glycerol-3-phosphate dehydrogenase (gpdhc gene) Length = 1708 Score = 176 bits (89), Expect = 6e-41 Identities = 316/392 (80%) Strand = Plus / Plus Query: 142 tatcttggaggcccaaacattgcctcagaaatttatnacaaggaatatgcaaatgctcga 201 |||||||| || ||||||||||| | |||||||| ||||||||||||| |||||| || Sbjct: 837 tatcttggtggaccaaacattgctgctgaaatttacaacaaggaatatgccaatgctaga 896 Query: 202 atctgcggatccaccaagtggaggaaacctcttgctaagtttcttagacaaccgcatttc 261 ||||| ||| | | || |||||||| || || |||||||| | |||||||| |||||| Sbjct: 897 atctgtggagctgctaaatggaggaagccactagctaagttcttaagacaacctcatttc 956 Query: 262 attgtttgggataacagtgacattgttactcatgaggttatgggtggcctgaagaatgta 321 ||||||||||| || ||||| |||| || ||||| || ||||| || || |||||||| Sbjct: 957 attgtttgggacaatagtgatcttgtgacacatgaagtaatgggaggtctcaagaatgtc 1016 Query: 322 tatgctattggtgctggaatggtggcagctttaacaaacgagagtgcaacaagcaaatca 381 || || ||||| ||||| ||||| || || | || |||||||| || |||||||| || Sbjct: 1017 tacgccattggagctggtatggtagcggcgctcactaacgagagcgctacaagcaagtcg 1076 Query: 382 gtgtattttgctcactgcacgtcagagatgatattcattacccatctactgacagaacag 441 |||||||||||||| || || || ||||||||||| || || ||| |||| ||||| || Sbjct: 1077 gtgtattttgctcattgtacatctgagatgatatttataactcatttactagcagaagag 1136 Query: 442 ccagagaaacttgccggccctctgctggctgatacttatgtaactctcctaaaaggtcgc 501 || ||||||||||| || ||| |||| ||||| |||||||| || | ||||||| || Sbjct: 1137 cctgagaaacttgcagggcctttgctagctgacacttatgtgaccttattaaaaggacgt 1196 Query: 502 aatgcatggtatgggcaaatgctagcgaaggg 533 ||||||||||| || |||||||| || ||||| Sbjct: 1197 aatgcatggtacggtcaaatgctggcaaaggg 1228
>ref|NM_190938.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1404 Score = 155 bits (78), Expect = 2e-34 Identities = 302/377 (80%) Strand = Plus / Plus Query: 142 tatcttggaggcccaaacattgcctcagaaatttatnacaaggaatatgcaaatgctcga 201 |||||||||||||| |||||||| ||||||||||| | || ||||||||||||||||| Sbjct: 679 tatcttggaggccctaacattgcttcagaaatttacaataaagaatatgcaaatgctcgt 738 Query: 202 atctgcggatccaccaagtggaggaaacctcttgctaagtttcttagacaaccgcatttc 261 || || ||| | ||| ||||| |||||||||||||| ||| | || || || ||||| Sbjct: 739 atatgtggagctgacaaatggagaaaacctcttgctaaatttttgaggcagcctcatttt 798 Query: 262 attgtttgggataacagtgacattgttactcatgaggttatgggtggcctgaagaatgta 321 ||||| |||||||| ||||| | |||| ||||| || ||||| || |||| ||||| Sbjct: 799 attgtatgggataatagtgatctcattacacatgaagtcatgggaggtttgaaaaatgtg 858 Query: 322 tatgctattggtgctggaatggtggcagctttaacaaacgagagtgcaacaagcaaatca 381 ||||| |||||||| || |||||||||||| ||||||| ||||||||||| |||||||| Sbjct: 859 tatgccattggtgccggtatggtggcagctctaacaaatgagagtgcaaccagcaaatcc 918 Query: 382 gtgtattttgctcactgcacgtcagagatgatattcattacccatctactgacagaacag 441 || || ||||||| ||||| || || ||||| | ||| ||||| || || |||| || Sbjct: 919 gtttactttgctctttgcacatctgaaatgatttacataacccaccttttggaagaagag 978 Query: 442 ccagagaaacttgccggccctctgctggctgatacttatgtaactctcctaaaaggtcgc 501 || || |||||||| || || | ||||||| |||||||| || | || || ||||| Sbjct: 979 cctgaaaaacttgctgggccattattggctgacacttatgtcacattgctgaagggtcgt 1038 Query: 502 aatgcatggtatgggca 518 ||||||||||||||||| Sbjct: 1039 aatgcatggtatgggca 1055
>dbj|AK073318.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025P14, full insert sequence Length = 1898 Score = 155 bits (78), Expect = 2e-34 Identities = 302/377 (80%) Strand = Plus / Plus Query: 142 tatcttggaggcccaaacattgcctcagaaatttatnacaaggaatatgcaaatgctcga 201 |||||||||||||| |||||||| ||||||||||| | || ||||||||||||||||| Sbjct: 935 tatcttggaggccctaacattgcttcagaaatttacaataaagaatatgcaaatgctcgt 994 Query: 202 atctgcggatccaccaagtggaggaaacctcttgctaagtttcttagacaaccgcatttc 261 || || ||| | ||| ||||| |||||||||||||| ||| | || || || ||||| Sbjct: 995 atatgtggagctgacaaatggagaaaacctcttgctaaatttttgaggcagcctcatttt 1054 Query: 262 attgtttgggataacagtgacattgttactcatgaggttatgggtggcctgaagaatgta 321 ||||| |||||||| ||||| | |||| ||||| || ||||| || |||| ||||| Sbjct: 1055 attgtatgggataatagtgatctcattacacatgaagtcatgggaggtttgaaaaatgtg 1114 Query: 322 tatgctattggtgctggaatggtggcagctttaacaaacgagagtgcaacaagcaaatca 381 ||||| |||||||| || |||||||||||| ||||||| ||||||||||| |||||||| Sbjct: 1115 tatgccattggtgccggtatggtggcagctctaacaaatgagagtgcaaccagcaaatcc 1174 Query: 382 gtgtattttgctcactgcacgtcagagatgatattcattacccatctactgacagaacag 441 || || ||||||| ||||| || || ||||| | ||| ||||| || || |||| || Sbjct: 1175 gtttactttgctctttgcacatctgaaatgatttacataacccaccttttggaagaagag 1234 Query: 442 ccagagaaacttgccggccctctgctggctgatacttatgtaactctcctaaaaggtcgc 501 || || |||||||| || || | ||||||| |||||||| || | || || ||||| Sbjct: 1235 cctgaaaaacttgctgggccattattggctgacacttatgtcacattgctgaagggtcgt 1294 Query: 502 aatgcatggtatgggca 518 ||||||||||||||||| Sbjct: 1295 aatgcatggtatgggca 1311
>ref|NM_111648.3| Arabidopsis thaliana glycerol-3-phosphate dehydrogenase (NAD+) AT3G07690 mRNA, complete cds Length = 1811 Score = 145 bits (73), Expect = 2e-31 Identities = 274/341 (80%) Strand = Plus / Plus Query: 256 catttcattgtttgggataacagtgacattgttactcatgaggttatgggtggcctgaag 315 |||||||| || |||||||| |||||| | |||||||||| || ||||||||| ||||| Sbjct: 899 catttcatagtctgggataatagtgacctcattactcatgaagtaatgggtggcttgaag 958 Query: 316 aatgtatatgctattggtgctggaatggtggcagctttaacaaacgagagtgcaacaagc 375 ||||| ||||| |||||||| ||||||||||| | | || || || ||||| || ||| Sbjct: 959 aatgtttatgccattggtgcaggaatggtggctacactgactaaggaaagtgctaccagc 1018 Query: 376 aaatcagtgtattttgctcactgcacgtcagagatgatattcattacccatctactgaca 435 ||||||||||| ||||| || || || ||||||||||| || ||||| ||| || || | Sbjct: 1019 aaatcagtgtactttgcgcattgtacttcagagatgatttttattactcatttattggcc 1078 Query: 436 gaacagccagagaaacttgccggccctctgctggctgatacttatgtaactctcctaaaa 495 | ||||||||||||| || || ||| |||| || ||||| |||||||| | || ||| Sbjct: 1079 aaggagccagagaaactcgctgggcctttgcttgcggatacctatgtaacattactgaaa 1138 Query: 496 ggtcgcaatgcatggtatgggcaaatgctagcgaagggagaactcaggctcgatatgggt 555 ||||| ||||| ||||| || || | || || || |||||||| || || || |||||| Sbjct: 1139 ggtcgtaatgcgtggtacggccagaaacttgcaaaaggagaacttagccttgaaatgggt 1198 Query: 556 gacagtatcaaaggaaaggggatgattcagggtatttctgc 596 ||||| |||||||| ||||| ||||||||||| ||||||| Sbjct: 1199 gacagcatcaaaggcaagggaatgattcagggggtttctgc 1239
>gb|AC112160.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1579_G03, complete sequence Length = 121466 Score = 105 bits (53), Expect = 2e-19 Identities = 184/228 (80%) Strand = Plus / Plus Query: 111 tgcagctggcgttccaactgagaatatactctatcttggaggcccaaacattgcctcaga 170 ||||||||| |||||| |||||||| || ||||||||||| || |||||||| || || Sbjct: 100635 tgcagctggagttccattggagaatattctatatcttggaggtcctaacattgcatctga 100694 Query: 171 aatttatnacaaggaatatgcaaatgctcgaatctgcggatccaccaagtggaggaaacc 230 || ||| |||| ||||||||||||||||| || || ||| | ||||||||| ||||| Sbjct: 100695 gatatataacaaagaatatgcaaatgctcgcatatgtggagctgacaagtggagaaaacc 100754 Query: 231 tcttgctaagtttcttagacaaccgcatttcattgtttgggataacagtgacattgttac 290 ||| ||||| ||||| || || || ||||| ||||| |||||||| ||||| | | || Sbjct: 100755 tctagctaaatttctgaggcagcctcattttattgtgtgggataatagtgatctcatcac 100814 Query: 291 tcatgaggttatgggtggcctgaagaatgtatatgctattggtgctgg 338 |||||| || ||||| ||| | ||||| ||||||| ||||||||||| Sbjct: 100815 tcatgaagtaatgggcggcttaaagaacatatatgccattggtgctgg 100862 Score = 77.8 bits (39), Expect = 4e-11 Identities = 144/179 (80%) Strand = Plus / Plus Query: 340 atggtggcagctttaacaaacgagagtgcaacaagcaaatcagtgtattttgctcactgc 399 |||||||| || |||| || ||||||||||| |||||||| || || ||| | | ||| Sbjct: 101275 atggtggctgcactaaccaatgagagtgcaaccagcaaatcggtttacttttcactttgc 101334 Query: 400 acgtcagagatgatattcattacccatctactgacagaacagccagagaaacttgccggc 459 ||||| || ||||||| ||| |||||||| || | ||| | || |||||||||||||| Sbjct: 101335 acgtctgaaatgatatacatcacccatctcctagccgaagaccctgagaaacttgccggg 101394 Query: 460 cctctgctggctgatacttatgtaactctcctaaaaggtcgcaatgcatggtatgggca 518 ||| | | || ||||| |||||||| || || |||||||| ||||||||||||||||| Sbjct: 101395 cctttattagccgatacctatgtaacactgctgaaaggtcgtaatgcatggtatgggca 101453
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 105 bits (53), Expect = 2e-19 Identities = 184/228 (80%) Strand = Plus / Plus Query: 111 tgcagctggcgttccaactgagaatatactctatcttggaggcccaaacattgcctcaga 170 ||||||||| |||||| |||||||| || ||||||||||| || |||||||| || || Sbjct: 24214397 tgcagctggagttccattggagaatattctatatcttggaggtcctaacattgcatctga 24214456 Query: 171 aatttatnacaaggaatatgcaaatgctcgaatctgcggatccaccaagtggaggaaacc 230 || ||| |||| ||||||||||||||||| || || ||| | ||||||||| ||||| Sbjct: 24214457 gatatataacaaagaatatgcaaatgctcgcatatgtggagctgacaagtggagaaaacc 24214516 Query: 231 tcttgctaagtttcttagacaaccgcatttcattgtttgggataacagtgacattgttac 290 ||| ||||| ||||| || || || ||||| ||||| |||||||| ||||| | | || Sbjct: 24214517 tctagctaaatttctgaggcagcctcattttattgtgtgggataatagtgatctcatcac 24214576 Query: 291 tcatgaggttatgggtggcctgaagaatgtatatgctattggtgctgg 338 |||||| || ||||| ||| | ||||| ||||||| ||||||||||| Sbjct: 24214577 tcatgaagtaatgggcggcttaaagaacatatatgccattggtgctgg 24214624 Score = 77.8 bits (39), Expect = 4e-11 Identities = 144/179 (80%) Strand = Plus / Plus Query: 340 atggtggcagctttaacaaacgagagtgcaacaagcaaatcagtgtattttgctcactgc 399 |||||||| || |||| || ||||||||||| |||||||| || || ||| | | ||| Sbjct: 24215037 atggtggctgcactaaccaatgagagtgcaaccagcaaatcggtttacttttcactttgc 24215096 Query: 400 acgtcagagatgatattcattacccatctactgacagaacagccagagaaacttgccggc 459 ||||| || ||||||| ||| |||||||| || | ||| | || |||||||||||||| Sbjct: 24215097 acgtctgaaatgatatacatcacccatctcctagccgaagaccctgagaaacttgccggg 24215156 Query: 460 cctctgctggctgatacttatgtaactctcctaaaaggtcgcaatgcatggtatgggca 518 ||| | | || ||||| |||||||| || || |||||||| ||||||||||||||||| Sbjct: 24215157 cctttattagccgatacctatgtaacactgctgaaaggtcgtaatgcatggtatgggca 24215215
>dbj|AK066880.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013087A13, full insert sequence Length = 2858 Score = 105 bits (53), Expect = 2e-19 Identities = 184/228 (80%) Strand = Plus / Plus Query: 111 tgcagctggcgttccaactgagaatatactctatcttggaggcccaaacattgcctcaga 170 ||||||||| |||||| |||||||| || ||||||||||| || |||||||| || || Sbjct: 1280 tgcagctggagttccattggagaatattctatatcttggaggtcctaacattgcatctga 1339 Query: 171 aatttatnacaaggaatatgcaaatgctcgaatctgcggatccaccaagtggaggaaacc 230 || ||| |||| ||||||||||||||||| || || ||| | ||||||||| ||||| Sbjct: 1340 gatatataacaaagaatatgcaaatgctcgcatatgtggagctgacaagtggagaaaacc 1399 Query: 231 tcttgctaagtttcttagacaaccgcatttcattgtttgggataacagtgacattgttac 290 ||| ||||| ||||| || || || ||||| ||||| |||||||| ||||| | | || Sbjct: 1400 tctagctaaatttctgaggcagcctcattttattgtgtgggataatagtgatctcatcac 1459 Query: 291 tcatgaggttatgggtggcctgaagaatgtatatgctattggtgctgg 338 |||||| || ||||| ||| | ||||| ||||||| ||||||||||| Sbjct: 1460 tcatgaagtaatgggcggcttaaagaacatatatgccattggtgctgg 1507 Score = 77.8 bits (39), Expect = 4e-11 Identities = 144/179 (80%) Strand = Plus / Plus Query: 340 atggtggcagctttaacaaacgagagtgcaacaagcaaatcagtgtattttgctcactgc 399 |||||||| || |||| || ||||||||||| |||||||| || || ||| | | ||| Sbjct: 1920 atggtggctgcactaaccaatgagagtgcaaccagcaaatcggtttacttttcactttgc 1979 Query: 400 acgtcagagatgatattcattacccatctactgacagaacagccagagaaacttgccggc 459 ||||| || ||||||| ||| |||||||| || | ||| | || |||||||||||||| Sbjct: 1980 acgtctgaaatgatatacatcacccatctcctagccgaagaccctgagaaacttgccggg 2039 Query: 460 cctctgctggctgatacttatgtaactctcctaaaaggtcgcaatgcatggtatgggca 518 ||| | | || ||||| |||||||| || || |||||||| ||||||||||||||||| Sbjct: 2040 cctttattagccgatacctatgtaacactgctgaaaggtcgtaatgcatggtatgggca 2098
>gb|AC002510.3| Arabidopsis thaliana chromosome 2 clone T32G6 map CIC11C08, complete sequence Length = 91979 Score = 99.6 bits (50), Expect = 1e-17 Identities = 160/197 (81%) Strand = Plus / Plus Query: 142 tatcttggaggcccaaacattgcctcagaaatttatnacaaggaatatgcaaatgctcga 201 |||||||| || ||||||||||| | |||||||| ||||||||||||| |||||| || Sbjct: 28474 tatcttggtggaccaaacattgctgctgaaatttacaacaaggaatatgccaatgctaga 28533 Query: 202 atctgcggatccaccaagtggaggaaacctcttgctaagtttcttagacaaccgcatttc 261 ||||| ||| | | || |||||||| || || |||||||| | |||||||| |||||| Sbjct: 28534 atctgtggagctgctaaatggaggaagccactagctaagttcttaagacaacctcatttc 28593 Query: 262 attgtttgggataacagtgacattgttactcatgaggttatgggtggcctgaagaatgta 321 ||||||||||| || ||||| |||| || ||||| || ||||| || || |||||||| Sbjct: 28594 attgtttgggacaatagtgatcttgtgacacatgaagtaatgggaggtctcaagaatgtc 28653 Query: 322 tatgctattggtgctgg 338 || || ||||| ||||| Sbjct: 28654 tacgccattggagctgg 28670 Score = 95.6 bits (48), Expect = 2e-16 Identities = 144/176 (81%) Strand = Plus / Plus Query: 358 aacgagagtgcaacaagcaaatcagtgtattttgctcactgcacgtcagagatgatattc 417 |||||||| || |||||||| || |||||||||||||| || || || ||||||||||| Sbjct: 28768 aacgagagcgctacaagcaagtcggtgtattttgctcattgtacatctgagatgatattt 28827 Query: 418 attacccatctactgacagaacagccagagaaacttgccggccctctgctggctgatact 477 || || ||| |||| ||||| |||| ||||||||||| || ||| |||| ||||| ||| Sbjct: 28828 ataactcatttactagcagaagagcctgagaaacttgcagggcctttgctagctgacact 28887 Query: 478 tatgtaactctcctaaaaggtcgcaatgcatggtatgggcaaatgctagcgaaggg 533 ||||| || | ||||||| || ||||||||||| || |||||||| || ||||| Sbjct: 28888 tatgtgaccttattaaaaggacgtaatgcatggtacggtcaaatgctggcaaaggg 28943
>emb|BX820067.1|CNS0AAG2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS70ZB08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1819 Score = 99.6 bits (50), Expect = 1e-17 Identities = 248/314 (78%) Strand = Plus / Plus Query: 220 tggaggaaacctcttgctaagtttcttagacaaccgcatttcattgtttgggataacagt 279 |||||||| || || |||||||| | |||||||| |||||||||| ||||| || ||| Sbjct: 945 tggaggaagccactagctaagttcttaagacaacctcatttcattgcctgggacaatagt 1004 Query: 280 gacattgttactcatgaggttatgggtggcctgaagaatgtatatgctattggtgctgga 339 || |||| || ||||| || ||||| || || |||||||| || || || | || || Sbjct: 1005 gatcttgtgacacatgaagtaatgggaggtctcaagaatgtctacgccatggcagccggt 1064 Query: 340 atggtggcagctttaacaaacgagagtgcaacaagcaaatcagtgtattttgctcactgc 399 ||||| || || | || |||||||| || |||||||| || |||||||||||||| || Sbjct: 1065 atggtagcggcgctcactaacgagagcgctacaagcaagtcggtgtattttgctcattgt 1124 Query: 400 acgtcagagatgatattcattacccatctactgacagaacagccagagaaacttgccggc 459 || || ||||||||||| || || ||| |||| ||||| |||| ||||||||||| || Sbjct: 1125 acatctgagatgatatttataactcatttactagcagaagagcctgagaaacttgcaggg 1184 Query: 460 cctctgctggctgatacttatgtaactctcctaaaaggtcgcaatgcatggtatgggcaa 519 ||| |||| ||||| |||||||| || | ||||||| || ||||||||||| || ||| Sbjct: 1185 cctttgctagctgacacttatgtgaccttattaaaaggacgtaatgcatggtacggtcaa 1244 Query: 520 atgctagcgaaggg 533 ||||| || ||||| Sbjct: 1245 atgctggcaaaggg 1258
>dbj|AP003221.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0003D09 Length = 161970 Score = 93.7 bits (47), Expect = 7e-16 Identities = 157/194 (80%) Strand = Plus / Minus Query: 142 tatcttggaggcccaaacattgcctcagaaatttatnacaaggaatatgcaaatgctcga 201 |||||||||||||| |||||||| ||||||||||| | || ||||||||||||||||| Sbjct: 78993 tatcttggaggccctaacattgcttcagaaatttacaataaagaatatgcaaatgctcgt 78934 Query: 202 atctgcggatccaccaagtggaggaaacctcttgctaagtttcttagacaaccgcatttc 261 || || ||| | ||| ||||| |||||||||||||| ||| | || || || ||||| Sbjct: 78933 atatgtggagctgacaaatggagaaaacctcttgctaaatttttgaggcagcctcatttt 78874 Query: 262 attgtttgggataacagtgacattgttactcatgaggttatgggtggcctgaagaatgta 321 ||||| |||||||| ||||| | |||| ||||| || ||||| || |||| ||||| Sbjct: 78873 attgtatgggataatagtgatctcattacacatgaagtcatgggaggtttgaaaaatgtg 78814 Query: 322 tatgctattggtgc 335 ||||| |||||||| Sbjct: 78813 tatgccattggtgc 78800 Score = 69.9 bits (35), Expect = 9e-09 Identities = 143/179 (79%) Strand = Plus / Minus Query: 340 atggtggcagctttaacaaacgagagtgcaacaagcaaatcagtgtattttgctcactgc 399 |||||||||||| ||||||| ||||||||||| |||||||| || || ||||||| ||| Sbjct: 78436 atggtggcagctctaacaaatgagagtgcaaccagcaaatccgtttactttgctctttgc 78377 Query: 400 acgtcagagatgatattcattacccatctactgacagaacagccagagaaacttgccggc 459 || || || ||||| | ||| ||||| || || |||| |||| || |||||||| || Sbjct: 78376 acatctgaaatgatttacataacccaccttttggaagaagagcctgaaaaacttgctggg 78317 Query: 460 cctctgctggctgatacttatgtaactctcctaaaaggtcgcaatgcatggtatgggca 518 || | ||||||| |||||||| || | || || ||||| ||||||||||||||||| Sbjct: 78316 ccattattggctgacacttatgtcacattgctgaagggtcgtaatgcatggtatgggca 78258
>gb|AC009176.5|ATAC009176 Arabidopsis thaliana chromosome III P1 MLP3 genomic sequence, complete sequence Length = 79296 Score = 85.7 bits (43), Expect = 2e-13 Identities = 178/223 (79%) Strand = Plus / Plus Query: 364 agtgcaacaagcaaatcagtgtattttgctcactgcacgtcagagatgatattcattacc 423 ||||| || |||||||||||||| ||||| || || || ||||||||||| || ||||| Sbjct: 44434 agtgctaccagcaaatcagtgtactttgcgcattgtacttcagagatgatttttattact 44493 Query: 424 catctactgacagaacagccagagaaacttgccggccctctgctggctgatacttatgta 483 ||| || || | | ||||||||||||| || || ||| |||| || ||||| |||||| Sbjct: 44494 catttattggccaaggagccagagaaactcgctgggcctttgcttgcggatacctatgta 44553 Query: 484 actctcctaaaaggtcgcaatgcatggtatgggcaaatgctagcgaagggagaactcagg 543 || | || |||||||| ||||| ||||| || || | || || || |||||||| || Sbjct: 44554 acattactgaaaggtcgtaatgcgtggtacggccagaaacttgcaaaaggagaacttagc 44613 Query: 544 ctcgatatgggtgacagtatcaaaggaaaggggatgattcagg 586 || || ||||||||||| |||||||| ||||| |||||||||| Sbjct: 44614 cttgaaatgggtgacagcatcaaaggcaagggaatgattcagg 44656
>gb|AC013483.7|ATAC013483 Arabidopsis thaliana chromosome III BAC F17A17 genomic sequence, complete sequence Length = 121054 Score = 85.7 bits (43), Expect = 2e-13 Identities = 178/223 (79%) Strand = Plus / Plus Query: 364 agtgcaacaagcaaatcagtgtattttgctcactgcacgtcagagatgatattcattacc 423 ||||| || |||||||||||||| ||||| || || || ||||||||||| || ||||| Sbjct: 9468 agtgctaccagcaaatcagtgtactttgcgcattgtacttcagagatgatttttattact 9527 Query: 424 catctactgacagaacagccagagaaacttgccggccctctgctggctgatacttatgta 483 ||| || || | | ||||||||||||| || || ||| |||| || ||||| |||||| Sbjct: 9528 catttattggccaaggagccagagaaactcgctgggcctttgcttgcggatacctatgta 9587 Query: 484 actctcctaaaaggtcgcaatgcatggtatgggcaaatgctagcgaagggagaactcagg 543 || | || |||||||| ||||| ||||| || || | || || || |||||||| || Sbjct: 9588 acattactgaaaggtcgtaatgcgtggtacggccagaaacttgcaaaaggagaacttagc 9647 Query: 544 ctcgatatgggtgacagtatcaaaggaaaggggatgattcagg 586 || || ||||||||||| |||||||| ||||| |||||||||| Sbjct: 9648 cttgaaatgggtgacagcatcaaaggcaagggaatgattcagg 9690
>gb|AY110218.1| Zea mays CL6853_1 mRNA sequence Length = 1098 Score = 71.9 bits (36), Expect = 2e-09 Identities = 126/158 (79%) Strand = Plus / Minus Query: 256 catttcattgtttgggataacagtgacattgttactcatgaggttatgggtggcctgaag 315 ||||| ||||| |||||||||||||| | | |||||||| || ||||||||| | Sbjct: 823 cattttattgtgtgggataacagtgatctcatcactcatgaagtcatgggtggcttnnnn 764 Query: 316 aatgtatatgctattggtgctggaatggtggcagctttaacaaacgagagtgcaacaagc 375 ||| ||||||||||||||||| ||||| || || |||| |||||||||||||| ||| Sbjct: 763 nntgtctatgctattggtgctggtatggtagctgcactaaccaacgagagtgcaaccagc 704 Query: 376 aaatcagtgtattttgctcactgcacgtcagagatgat 413 ||||| || || ||||| | ||||| || |||||||| Sbjct: 703 aaatctgtttactttgcactttgcacatctgagatgat 666 Score = 56.0 bits (28), Expect = 1e-04 Identities = 72/87 (82%) Strand = Plus / Minus Query: 111 tgcagctggcgttccaactgagaatatactctatcttggaggcccaaacattgcctcaga 170 |||| |||| |||||| | |||||||| || |||||||| || || || ||||| || || Sbjct: 968 tgcaactggagttccatcagagaatattctttatcttggcggacctaatattgcttctga 909 Query: 171 aatttatnacaaggaatatgcaaatgc 197 |||||| |||| |||||||||||||| Sbjct: 908 aatttacaacaaagaatatgcaaatgc 882 Score = 52.0 bits (26), Expect = 0.002 Identities = 100/125 (80%) Strand = Plus / Minus Query: 493 aaaggtcgcaatgcatggtatgggcaaatgctagcgaagggagaactcaggctcgatatg 552 |||||||| ||||||||||||||||| | | |||| || || ||| | | | || ||| Sbjct: 586 aaaggtcgtaatgcatggtatgggcagaagttagctaaaggtgaattgacattagaaatg 527 Query: 553 ggtgacagtatcaaaggaaaggggatgattcagggtatttctgctgttggngcatttttt 612 ||||||||||| |||||||| |||| ||||||||| | ||||| |||| || |||| | Sbjct: 526 ggtgacagtattaaaggaaaagggaccattcagggtgtctctgcagttgatgcgttttat 467 Query: 613 gagct 617 ||||| Sbjct: 466 gagct 462
>gb|AY224556.1| Oryza sativa (japonica cultivar-group) isolate 26646 glycerol-3-phosphate dehydrogenase-like protein mRNA, partial cds Length = 738 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 142 tatcttggaggcccaaacattgcctcagaaattta 176 |||||||||||||| |||||||| ||||||||||| Sbjct: 694 tatcttggaggccctaacattgcttcagaaattta 728
>gb|DQ013289.1| Zorotypus sp. MY1 18S ribosomal RNA gene, partial sequence Length = 1907 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 319 gtatatgctattggtgctggaat 341 ||||||||||||||||||||||| Sbjct: 606 gtatatgctattggtgctggaat 584
>dbj|AK047637.1| Mus musculus adult male corpus striatum cDNA, RIKEN full-length enriched library, clone:C030004B14 product:inferred: myelin basic protein expression factor 2, repressor, full insert sequence Length = 4367 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 565 aaaggaaaggggatgattcaggg 587 ||||||||||||||||||||||| Sbjct: 3406 aaaggaaaggggatgattcaggg 3384
>emb|AL928902.16| Mouse DNA sequence from clone RP24-221D3 on chromosome 2, complete sequence Length = 167573 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 565 aaaggaaaggggatgattcaggg 587 ||||||||||||||||||||||| Sbjct: 156652 aaaggaaaggggatgattcaggg 156674
>dbj|AK047324.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930049H17 product:unclassifiable, full insert sequence Length = 3751 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 137 tactctatcttggaggcccaaa 158 |||||||||||||||||||||| Sbjct: 3443 tactctatcttggaggcccaaa 3464
>emb|AL805970.8| Mouse DNA sequence from clone RP23-438O3 on chromosome 4, complete sequence Length = 180421 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 137 tactctatcttggaggcccaaa 158 |||||||||||||||||||||| Sbjct: 37601 tactctatcttggaggcccaaa 37622
>gb|AC109225.13| Mus musculus chromosome 19, clone RP23-395B21, complete sequence Length = 257062 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 279 tgacattgttactcatgaggt 299 ||||||||||||||||||||| Sbjct: 153376 tgacattgttactcatgaggt 153396
>gb|AC154738.2| Mus musculus BAC clone RP24-390D14 from chromosome 14, complete sequence Length = 197100 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 434 cagaacagccagagaaacttg 454 ||||||||||||||||||||| Sbjct: 175045 cagaacagccagagaaacttg 175065
>gb|AC164099.3| Mus musculus BAC clone RP23-10H9 from chromosome 14, complete sequence Length = 221612 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 434 cagaacagccagagaaacttg 454 ||||||||||||||||||||| Sbjct: 203263 cagaacagccagagaaacttg 203243
>gb|AC161376.2| Mus musculus BAC clone RP23-264M10 from chromosome 16, complete sequence Length = 199086 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 469 gctgatacttatgtaactct 488 |||||||||||||||||||| Sbjct: 67426 gctgatacttatgtaactct 67445
>gb|AC125377.5| Mus musculus BAC clone RP23-27C10 from chromosome 1, complete sequence Length = 227511 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 ctcttgctaagtttcttaga 249 |||||||||||||||||||| Sbjct: 136438 ctcttgctaagtttcttaga 136457
>gb|AC115940.11| Mus musculus chromosome 5, clone RP24-553D12, complete sequence Length = 189685 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 gcaaaggggatagaagcctc 62 |||||||||||||||||||| Sbjct: 1892 gcaaaggggatagaagcctc 1911
>gb|AC164086.3| Mus musculus BAC clone RP23-25E6 from chromosome 13, complete sequence Length = 214085 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 tgcagctggcgttccaactg 130 |||||||||||||||||||| Sbjct: 126074 tgcagctggcgttccaactg 126093
>gb|AC002519.1|HUAC002519 Human Chromosome 16 BAC clone CIT987SK-A-355G7, complete sequence Length = 139958 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 312 gaagaatgtatatgctattg 331 |||||||||||||||||||| Sbjct: 56611 gaagaatgtatatgctattg 56630
>gb|AC127275.4| Mus musculus BAC clone RP24-207I8 from chromosome 5, complete sequence Length = 180919 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 gcaaaggggatagaagcctc 62 |||||||||||||||||||| Sbjct: 76826 gcaaaggggatagaagcctc 76845
>emb|AL391838.9| Human DNA sequence from clone RP11-307O11 on chromosome 13, complete sequence Length = 146127 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 gaagaatgtatatgctattg 331 |||||||||||||||||||| Sbjct: 118469 gaagaatgtatatgctattg 118450
>emb|AL355539.18| Human DNA sequence from clone RP5-1077K16 on chromosome 1 Contains the gene for protein arginine N-methyltransferase 6 (PRMT6) and a CpG island, complete sequence Length = 92293 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 gaagaatgtatatgctattg 331 |||||||||||||||||||| Sbjct: 48946 gaagaatgtatatgctattg 48927
>gb|AC163343.2| Mus musculus BAC clone RP23-472D11 from chromosome 13, complete sequence Length = 164331 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 tgcagctggcgttccaactg 130 |||||||||||||||||||| Sbjct: 132402 tgcagctggcgttccaactg 132383
>gb|AC011505.6| Homo sapiens chromosome 19 clone CTD-2081K17, complete sequence Length = 167417 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 567 aggaaaggggatgattcagg 586 |||||||||||||||||||| Sbjct: 31155 aggaaaggggatgattcagg 31174
>gb|AC079801.2| Homo sapiens BAC clone RP11-717F1 from 16, complete sequence Length = 177312 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 265 gtttgggataacagtgacattgtt 288 |||||||| ||||||||||||||| Sbjct: 3152 gtttgggagaacagtgacattgtt 3175
>gb|AF349466.1|AF349466 Homo sapiens neutrophil-activating peptide ENA-78, platelet basic protein, and platelet factor 4 genes, complete cds Length = 53374 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 atattcattacccatctact 431 |||||||||||||||||||| Sbjct: 35916 atattcattacccatctact 35935
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 aacctcttgctaagtttctt 246 |||||||||||||||||||| Sbjct: 13845246 aacctcttgctaagtttctt 13845265
>gb|AC097709.3| Homo sapiens BAC clone RP11-19B4 from 4, complete sequence Length = 160741 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 atattcattacccatctact 431 |||||||||||||||||||| Sbjct: 63913 atattcattacccatctact 63894
>gb|CP000084.1| Candidatus Pelagibacter ubique HTCC1062, complete genome Length = 1308759 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 aagaatgtatatgctattgg 332 |||||||||||||||||||| Sbjct: 234726 aagaatgtatatgctattgg 234707
>dbj|AP002970.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0504D03 Length = 139201 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 aacctcttgctaagtttctt 246 |||||||||||||||||||| Sbjct: 107257 aacctcttgctaagtttctt 107276
>dbj|AP005577.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1655_B12 Length = 132736 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 aacctcttgctaagtttctt 246 |||||||||||||||||||| Sbjct: 94730 aacctcttgctaagtttctt 94749 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,062,381 Number of Sequences: 3902068 Number of extensions: 5062381 Number of successful extensions: 93438 Number of sequences better than 10.0: 50 Number of HSP's better than 10.0 without gapping: 52 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 93210 Number of HSP's gapped (non-prelim): 202 length of query: 622 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 599 effective length of database: 17,143,297,704 effective search space: 10268835324696 effective search space used: 10268835324696 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
