ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd18m14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009571.1| Triticum aestivum clone wre1n.pk0021.e3:fis, full... 155 2e-34
2dbj|AK106179.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 4e-11
3dbj|AK059770.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 4e-11
4gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome... 70 1e-08
5gb|AC147811.2| Oryza sativa (japonica cultivar-group) chromosome... 70 1e-08
6gb|AC112208.3| Oryza sativa (japonica cultivar-group) chromosome... 70 1e-08
7dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 70 1e-08
8gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 70 1e-08
9dbj|AK061247.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 6e-07
10gb|AY107519.1| Zea mays PCO078033 mRNA sequence 64 6e-07
11gb|AC138195.2| Oryza sativa (japonica cultivar-group) chromosome... 60 1e-05
12gb|AC135793.4| Oryza sativa chromosome 11 BAC clone OSJNBb0017P1... 54 6e-04
13ref|XM_477999.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.037
14dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.037
15dbj|AP003916.2| Oryza sativa (japonica cultivar-group) genomic D... 48 0.037
16ref|XM_474642.1| Oryza sativa (japonica cultivar-group), predic... 42 2.3
17gb|AC101777.8| Mus musculus chromosome 1, clone RP24-123J3, comp... 42 2.3
18ref|XM_746399.1| Aspergillus fumigatus Af293 actin-related prote... 42 2.3
19ref|XM_501466.1| Yarrowia lipolytica CLIB122, YALI0C05258g predi... 42 2.3
20emb|AL731589.3|OSJN00239 Oryza sativa genomic DNA, chromosome 4,... 42 2.3
21dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
22gb|AC131072.13| Mus musculus chromosome 1, clone RP23-396F21, co... 42 2.3
23dbj|AK109384.2| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.3
24gb|AC174827.3| Cavia porcellus clone CH234-477P24, complete sequ... 42 2.3
25emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB1... 42 2.3
26gb|AC134248.3| Mus musculus BAC clone RP23-338G21 from chromosom... 40 8.9
27ref|XM_989083.1| PREDICTED: Mus musculus transglutaminase 4 (pro... 40 8.9
28emb|AL591804.5| Human DNA sequence from clone RP11-457O1 on chro... 40 8.9
29ref|XM_791236.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 8.9
30emb|AL353701.15| Human DNA sequence from clone RP11-203M2 on chr... 40 8.9
31gb|AC011291.8| Homo sapiens BAC clone RP11-67G7 from 2, complete... 40 8.9
32gb|AC012495.9| Homo sapiens BAC clone RP11-327F6 from 2, complet... 40 8.9
33emb|BX511027.20| Zebrafish DNA sequence from clone CH211-281P14 ... 40 8.9
34dbj|AK035279.1| Mus musculus adult male urinary bladder cDNA, RI... 40 8.9
35gb|AC017087.5|AC017087 Homo sapiens BAC clone RP11-495H13 from 4... 40 8.9
36emb|BX005328.9| Zebrafish DNA sequence from clone DKEY-63D15 in ... 40 8.9
37gb|AC087798.10| Homo sapiens 12 BAC RP11-788H18 (Roswell Park Ca... 40 8.9
38gb|AF486627.1| Mus musculus experimental autoimmune prostatitis ... 40 8.9
39dbj|AP001458.6| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 8.9
40gb|AC133650.4| Mus musculus BAC clone RP23-453B15 from 9, comple... 40 8.9
41ref|NM_177911.2| Mus musculus transglutaminase 4 (prostate) (Tgm... 40 8.9
42emb|AL672285.8| Mouse DNA sequence from clone RP23-45G5 on chrom... 40 8.9
43emb|AL805949.4| Mouse DNA sequence from clone RP23-424K9 on chro... 40 8.9
44emb|AL645736.9| Mouse DNA sequence from clone RP23-474J7 on chro... 40 8.9 
>gb|BT009571.1| Triticum aestivum clone wre1n.pk0021.e3:fis, full insert mRNA
           sequence
          Length = 770

 Score =  155 bits (78), Expect = 2e-34
 Identities = 156/182 (85%)
 Strand = Plus / Plus

                                                                       
Query: 33  gttaagtatgtttctggtgacctgttccacgtcgtcccacctgctcaagccgtgttgctc 92
           ||||| |||||  |||||||||| |||||   ||||||||| ||||| |||||  |||||
Sbjct: 153 gttaactatgtcgctggtgacctcttccataccgtcccaccagctcaggccgtcatgctc 212

                                                                       
Query: 93  aagcttgttctgcacttctggagcgacgaggattgcatcaagatcctcgcacaatgcagg 152
           ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 213 aagcttgttctacacttctggagcgacgaggattgcatcaagatcctcgctcaatgcaag 272

                                                                       
Query: 153 aaggccgttcctccacgtgaagcaggagggaaagtcatcgtcatagacattgtgcttgga 212
           |||||| | ||| | || |||   ||||| ||||| ||| |||||||||| |||||||||
Sbjct: 273 aaggccataccttcccgagaaatgggaggaaaagtgatcatcatagacatagtgcttgga 332

             
Query: 213 tc 214
           ||
Sbjct: 333 tc 334



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 53/60 (88%)
 Strand = Plus / Plus

                                                                       
Query: 338 ctataagattgtcaagaagctgggagctcgagctgtcattgaggtctatccataaggttg 397
           |||||||||||||||||| || ||   ||||| |||||| ||||||||||||||||||||
Sbjct: 458 ctataagattgtcaagaaacttggccatcgaggtgtcatcgaggtctatccataaggttg 517
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>dbj|AK106179.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-C11, full
           insert sequence
          Length = 1362

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 135/167 (80%)
 Strand = Plus / Plus

                                                                       
Query: 33  gttaagtatgtttctggtgacctgttccacgtcgtcccacctgctcaagccgtgttgctc 92
           ||||| |||||| | |||||| ||||||||  ||| ||||| |||||||||||| |||||
Sbjct: 795 gttaactatgttgcaggtgacttgttccacaccgtgccaccggctcaagccgtgatgctc 854

                                                                       
Query: 93  aagcttgttctgcacttctggagcgacgaggattgcatcaagatcctcgcacaatgcagg 152
           ||||||||  |||||  ||||||||| || |||||| | |||||| |  | || ||||| 
Sbjct: 855 aagcttgtattgcaccactggagcgatgatgattgcgtgaagatcttgactcagtgcaga 914

                                                          
Query: 153 aaggccgttcctccacgtgaagcaggagggaaagtcatcgtcataga 199
           |||||| ||||  |||| || |  |||||||| |||||| |||||||
Sbjct: 915 aaggccattccatcacgagaggagggagggaaggtcatcatcataga 961



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 338  ctataagattgtcaagaagctgggagctcgag 369
            |||||||||||| |||| ||| ||||||||||
Sbjct: 1103 ctataagattgtgaagatgcttggagctcgag 1134
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>dbj|AK059770.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-H05, full
           insert sequence
          Length = 1264

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 135/167 (80%)
 Strand = Plus / Plus

                                                                       
Query: 33  gttaagtatgtttctggtgacctgttccacgtcgtcccacctgctcaagccgtgttgctc 92
           ||||| |||||| | |||||| ||||||||  ||| ||||| |||||||||||| |||||
Sbjct: 800 gttaactatgttgcaggtgacttgttccacaccgtgccaccggctcaagccgtgatgctc 859

                                                                       
Query: 93  aagcttgttctgcacttctggagcgacgaggattgcatcaagatcctcgcacaatgcagg 152
           ||||||||  |||||  ||||||||| || |||||| | |||||| |  | || ||||| 
Sbjct: 860 aagcttgtattgcaccactggagcgatgatgattgcgtgaagatcttgactcagtgcaga 919

                                                          
Query: 153 aaggccgttcctccacgtgaagcaggagggaaagtcatcgtcataga 199
           |||||| ||||  |||| || |  |||||||| |||||| |||||||
Sbjct: 920 aaggccattccatcacgagaggagggagggaaggtcatcatcataga 966



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 338  ctataagattgtcaagaagctgggagctcgag 369
            |||||||||||| |||| ||| ||||||||||
Sbjct: 1108 ctataagattgtgaagatgcttggagctcgag 1139
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>gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0097K08 map C827S, complete sequence
          Length = 137870

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 59/67 (88%)
 Strand = Plus / Plus

                                                                         
Query: 324   gctggcttcagtggctataagattgtcaagaagctgggagctcgagctgtcattgaggtc 383
             ||||| ||||||| ||||||||| | ||||||||| ||||||||||||||  | ||||||
Sbjct: 44962 gctggattcagtgactataagatcgccaagaagctcggagctcgagctgtgttcgaggtc 45021

                    
Query: 384   tatccat 390
             |||||||
Sbjct: 45022 tatccat 45028



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 56/66 (84%)
 Strand = Plus / Plus

                                                                         
Query: 30    gtggttaagtatgtttctggtgacctgttccacgtcgtcccacctgctcaagccgtgttg 89
             |||||||| |||||| | |||||| |||| || |  ||||||||||||||||||||| | 
Sbjct: 44283 gtggttaactatgttgcaggtgacatgtttcatgctgtcccacctgctcaagccgtgctt 44342

                   
Query: 90    ctcaag 95
             ||||||
Sbjct: 44343 ctcaag 44348
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>gb|AC147811.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0026P08 map near C827S, complete sequence
          Length = 148676

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 59/67 (88%)
 Strand = Plus / Minus

                                                                         
Query: 324   gctggcttcagtggctataagattgtcaagaagctgggagctcgagctgtcattgaggtc 383
             ||||| ||||||| ||||||||| | ||||||||| ||||||||||||||  | ||||||
Sbjct: 50813 gctggattcagtgactataagatcgccaagaagctcggagctcgagctgtgttcgaggtc 50754

                    
Query: 384   tatccat 390
             |||||||
Sbjct: 50753 tatccat 50747



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                         
Query: 30    gtggttaagtatgtttctggtgacctgttccacgtcgtcccacctgctcaagccgtgttg 89
             |||||||| |||||| | |||||| |||| || |  ||||||||||||||||||||| | 
Sbjct: 51492 gtggttaactatgttgcaggtgacatgtttcatgctgtcccacctgctcaagccgtgctt 51433

                   
Query: 90    ctcaag 95
             ||||||
Sbjct: 51432 ctcaag 51427
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>gb|AC112208.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0015P05
              map C53961S, complete sequence
          Length = 175121

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 131/163 (80%)
 Strand = Plus / Minus

                                                                          
Query: 229    tgctggaaacccagcacctcatggatatgctcatgctggtgatgacgagaggccgacagc 288
              |||| ||| |||||| |||||||||| ||   ||| ||||| |||| | |||||||||||
Sbjct: 140406 tgctagaagcccagctcctcatggatgtggctatgatggtggtgaccaaaggccgacagc 140347

                                                                          
Query: 289    gggaagagaaggactggaacgagatcttcaccaaggctggcttcagtggctataagattg 348
              | || ||||| || |||   ||  |||||| ||| || |||||||||| ||| || ||||
Sbjct: 140346 gagacgagaatgattggcgtgatctcttcagcaaagcaggcttcagtgactacaatattg 140287

                                                         
Query: 349    tcaagaagctgggagctcgagctgtcattgaggtctatccata 391
              | ||||| |||||||||||||  ||| |||||||||| |||||
Sbjct: 140286 tgaagaaactgggagctcgaggcgtctttgaggtctacccata 140244



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 55/61 (90%), Gaps = 1/61 (1%)
 Strand = Plus / Minus

                                                                          
Query: 327    ggcttcagtggctataagattgtcaagaagctgggagctcgagctgtcattgaggtctat 386
              |||||||||| |||||||||||| ||||| ||||||||||||||| |  |||||||||||
Sbjct: 138421 ggcttcagtgactataagattgtgaagaa-ctgggagctcgagctatatttgaggtctat 138363

               
Query: 387    c 387
              |
Sbjct: 138362 c 138362



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                 
Query: 338    ctataagattgtcaagaagctgggagctcgagctgtcattgaggtctatcc 388
              |||||||||||| || ||  || |||||||||||||| |||||||||||||
Sbjct: 116006 ctataagattgtgaaaaaattgagagctcgagctgtctttgaggtctatcc 115956



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                  
Query: 111   tggagcgacgaggattgcatcaagatcctcgcacaatgcaggaaggccgttcc 163
             |||||||||||||| ||||| |||||||| || ||||||| ||| || |||||
Sbjct: 81166 tggagcgacgaggactgcataaagatcctagcccaatgcaagaaagcggttcc 81114



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                         
Query: 327   ggcttcagtggctataagattgtcaagaagctgggagctcgagctgtcattgaggtctat 386
             |||||||| | ||| |||||||| |||||  ||||| ||||   ||||||||||||||||
Sbjct: 80950 ggcttcagggactacaagattgtgaagaaattgggacctcggtgtgtcattgaggtctat 80891

               
Query: 387   cc 388
             ||
Sbjct: 80890 cc 80889



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                              
Query: 48     ggtgacctgttccacgtcgtcccacctgctcaagccgtgttgctcaag 95
              |||||| |||||| || | |||||||||||||||| ||  ||||||||
Sbjct: 117278 ggtgacatgttccgcgccatcccacctgctcaagctgtcatgctcaag 117231
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 131/163 (80%)
 Strand = Plus / Minus

                                                                            
Query: 229      tgctggaaacccagcacctcatggatatgctcatgctggtgatgacgagaggccgacagc 288
                |||| ||| |||||| |||||||||| ||   ||| ||||| |||| | |||||||||||
Sbjct: 11354048 tgctagaagcccagctcctcatggatgtggctatgatggtggtgaccaaaggccgacagc 11353989

                                                                            
Query: 289      gggaagagaaggactggaacgagatcttcaccaaggctggcttcagtggctataagattg 348
                | || ||||| || |||   ||  |||||| ||| || |||||||||| ||| || ||||
Sbjct: 11353988 gagacgagaatgattggcgtgatctcttcagcaaagcaggcttcagtgactacaatattg 11353929

                                                           
Query: 349      tcaagaagctgggagctcgagctgtcattgaggtctatccata 391
                | ||||| |||||||||||||  ||| |||||||||| |||||
Sbjct: 11353928 tgaagaaactgggagctcgaggcgtctttgaggtctacccata 11353886



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 59/67 (88%)
 Strand = Plus / Minus

                                                                           
Query: 324     gctggcttcagtggctataagattgtcaagaagctgggagctcgagctgtcattgaggtc 383
               ||||| ||||||| ||||||||| | ||||||||| ||||||||||||||  | ||||||
Sbjct: 7137593 gctggattcagtgactataagatcgccaagaagctcggagctcgagctgtgttcgaggtc 7137534

                      
Query: 384     tatccat 390
               |||||||
Sbjct: 7137533 tatccat 7137527



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 55/61 (90%), Gaps = 1/61 (1%)
 Strand = Plus / Minus

                                                                            
Query: 327      ggcttcagtggctataagattgtcaagaagctgggagctcgagctgtcattgaggtctat 386
                |||||||||| |||||||||||| ||||| ||||||||||||||| |  |||||||||||
Sbjct: 11352063 ggcttcagtgactataagattgtgaagaa-ctgggagctcgagctatatttgaggtctat 11352005

                 
Query: 387      c 387
                |
Sbjct: 11352004 c 11352004



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                          
Query: 330      ttcagtggctataagattgtcaagaagctgggagctcgagctgtcattgaggtctatc 387
                ||||||| |||||||||||| ||||| || || |||||||||||| | ||||||||||
Sbjct: 11549372 ttcagtgactataagattgtgaagaaacttggtgctcgagctgtcttcgaggtctatc 11549315



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 54/63 (85%)
 Strand = Plus / Minus

                                                                            
Query: 33       gttaagtatgtttctggtgacctgttccacgtcgtcccacctgctcaagccgtgttgctc 92
                ||||| |||||| | |||||| ||||||||  ||| ||||| |||||||||||| |||||
Sbjct: 11494153 gttaactatgttgcaggtgacttgttccacaccgtgccaccggctcaagccgtgatgctc 11494094

                   
Query: 93       aag 95
                |||
Sbjct: 11494093 aag 11494091



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                   
Query: 338      ctataagattgtcaagaagctgggagctcgagctgtcattgaggtctatcc 388
                |||||||||||| || ||  || |||||||||||||| |||||||||||||
Sbjct: 11329648 ctataagattgtgaaaaaattgagagctcgagctgtctttgaggtctatcc 11329598



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                           
Query: 30      gtggttaagtatgtttctggtgacctgttccacgtcgtcccacctgctcaagccgtgttg 89
               |||||||| |||||| | |||||| |||| || |  ||||||||||||||||||||| | 
Sbjct: 7138272 gtggttaactatgttgcaggtgacatgtttcatgctgtcccacctgctcaagccgtgctt 7138213

                     
Query: 90      ctcaag 95
               ||||||
Sbjct: 7138212 ctcaag 7138207



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                     
Query: 111      tggagcgacgaggattgcatcaagatcctcgcacaatgcaggaaggccgttcc 163
                |||||||||||||| ||||| |||||||| || ||||||| ||| || |||||
Sbjct: 11294808 tggagcgacgaggactgcataaagatcctagcccaatgcaagaaagcggttcc 11294756



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                            
Query: 327      ggcttcagtggctataagattgtcaagaagctgggagctcgagctgtcattgaggtctat 386
                |||||||| | ||| |||||||| |||||  ||||| ||||   ||||||||||||||||
Sbjct: 11294592 ggcttcagggactacaagattgtgaagaaattgggacctcggtgtgtcattgaggtctat 11294533

                  
Query: 387      cc 388
                ||
Sbjct: 11294532 cc 11294531



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 63/77 (81%)
 Strand = Plus / Plus

                                                                            
Query: 309      gagatcttcaccaaggctggcttcagtggctataagattgtcaagaagctgggagctcga 368
                ||||||||||| || ||||| ||||| | ||| |||||  | || || || |||||||||
Sbjct: 11485428 gagatcttcactaatgctggattcagcgactacaagatcatgaacaaactaggagctcga 11485487

                                 
Query: 369      gctgtcattgaggtcta 385
                  |||||||||||||||
Sbjct: 11485488 tgtgtcattgaggtcta 11485504



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                            
Query: 327      ggcttcagtggctataagattgtcaagaagctgggagctcgagctgtcattgaggtctat 386
                ||||||||||  || |||||||| |||||||| |||  |||||   || |||||||||||
Sbjct: 11437302 ggcttcagtgattacaagattgtgaagaagctaggaattcgaggcatctttgaggtctat 11437243

                     
Query: 387      ccata 391
                |||||
Sbjct: 11437242 ccata 11437238



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 338      ctataagattgtcaagaagctgggagctcgag 369
                |||||||||||| |||| ||| ||||||||||
Sbjct: 11490678 ctataagattgtgaagatgcttggagctcgag 11490647



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                                
Query: 48       ggtgacctgttccacgtcgtcccacctgctcaagccgtgttgctcaag 95
                |||||| |||||| || | |||||||||||||||| ||  ||||||||
Sbjct: 11330920 ggtgacatgttccgcgccatcccacctgctcaagctgtcatgctcaag 11330873
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 131/163 (80%)
 Strand = Plus / Minus

                                                                            
Query: 229      tgctggaaacccagcacctcatggatatgctcatgctggtgatgacgagaggccgacagc 288
                |||| ||| |||||| |||||||||| ||   ||| ||||| |||| | |||||||||||
Sbjct: 11433237 tgctagaagcccagctcctcatggatgtggctatgatggtggtgaccaaaggccgacagc 11433178

                                                                            
Query: 289      gggaagagaaggactggaacgagatcttcaccaaggctggcttcagtggctataagattg 348
                | || ||||| || |||   ||  |||||| ||| || |||||||||| ||| || ||||
Sbjct: 11433177 gagacgagaatgattggcgtgatctcttcagcaaagcaggcttcagtgactacaatattg 11433118

                                                           
Query: 349      tcaagaagctgggagctcgagctgtcattgaggtctatccata 391
                | ||||| |||||||||||||  ||| |||||||||| |||||
Sbjct: 11433117 tgaagaaactgggagctcgaggcgtctttgaggtctacccata 11433075



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 59/67 (88%)
 Strand = Plus / Minus

                                                                           
Query: 324     gctggcttcagtggctataagattgtcaagaagctgggagctcgagctgtcattgaggtc 383
               ||||| ||||||| ||||||||| | ||||||||| ||||||||||||||  | ||||||
Sbjct: 7203564 gctggattcagtgactataagatcgccaagaagctcggagctcgagctgtgttcgaggtc 7203505

                      
Query: 384     tatccat 390
               |||||||
Sbjct: 7203504 tatccat 7203498



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 55/61 (90%), Gaps = 1/61 (1%)
 Strand = Plus / Minus

                                                                            
Query: 327      ggcttcagtggctataagattgtcaagaagctgggagctcgagctgtcattgaggtctat 386
                |||||||||| |||||||||||| ||||| ||||||||||||||| |  |||||||||||
Sbjct: 11431252 ggcttcagtgactataagattgtgaagaa-ctgggagctcgagctatatttgaggtctat 11431194

                 
Query: 387      c 387
                |
Sbjct: 11431193 c 11431193



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                          
Query: 330      ttcagtggctataagattgtcaagaagctgggagctcgagctgtcattgaggtctatc 387
                ||||||| |||||||||||| ||||| || || |||||||||||| | ||||||||||
Sbjct: 11628561 ttcagtgactataagattgtgaagaaacttggtgctcgagctgtcttcgaggtctatc 11628504



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 54/63 (85%)
 Strand = Plus / Minus

                                                                            
Query: 33       gttaagtatgtttctggtgacctgttccacgtcgtcccacctgctcaagccgtgttgctc 92
                ||||| |||||| | |||||| ||||||||  ||| ||||| |||||||||||| |||||
Sbjct: 11573342 gttaactatgttgcaggtgacttgttccacaccgtgccaccggctcaagccgtgatgctc 11573283

                   
Query: 93       aag 95
                |||
Sbjct: 11573282 aag 11573280



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                   
Query: 338      ctataagattgtcaagaagctgggagctcgagctgtcattgaggtctatcc 388
                |||||||||||| || ||  || |||||||||||||| |||||||||||||
Sbjct: 11408837 ctataagattgtgaaaaaattgagagctcgagctgtctttgaggtctatcc 11408787



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                           
Query: 30      gtggttaagtatgtttctggtgacctgttccacgtcgtcccacctgctcaagccgtgttg 89
               |||||||| |||||| | |||||| |||| || |  ||||||||||||||||||||| | 
Sbjct: 7204243 gtggttaactatgttgcaggtgacatgtttcatgctgtcccacctgctcaagccgtgctt 7204184

                     
Query: 90      ctcaag 95
               ||||||
Sbjct: 7204183 ctcaag 7204178



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                     
Query: 111      tggagcgacgaggattgcatcaagatcctcgcacaatgcaggaaggccgttcc 163
                |||||||||||||| ||||| |||||||| || ||||||| ||| || |||||
Sbjct: 11373997 tggagcgacgaggactgcataaagatcctagcccaatgcaagaaagcggttcc 11373945



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                            
Query: 327      ggcttcagtggctataagattgtcaagaagctgggagctcgagctgtcattgaggtctat 386
                |||||||| | ||| |||||||| |||||  ||||| ||||   ||||||||||||||||
Sbjct: 11373781 ggcttcagggactacaagattgtgaagaaattgggacctcggtgtgtcattgaggtctat 11373722

                  
Query: 387      cc 388
                ||
Sbjct: 11373721 cc 11373720



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 63/77 (81%)
 Strand = Plus / Plus

                                                                            
Query: 309      gagatcttcaccaaggctggcttcagtggctataagattgtcaagaagctgggagctcga 368
                ||||||||||| || ||||| ||||| | ||| |||||  | || || || |||||||||
Sbjct: 11564617 gagatcttcactaatgctggattcagcgactacaagatcatgaacaaactaggagctcga 11564676

                                 
Query: 369      gctgtcattgaggtcta 385
                  |||||||||||||||
Sbjct: 11564677 tgtgtcattgaggtcta 11564693



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                            
Query: 327      ggcttcagtggctataagattgtcaagaagctgggagctcgagctgtcattgaggtctat 386
                ||||||||||  || |||||||| |||||||| |||  |||||   || |||||||||||
Sbjct: 11516491 ggcttcagtgattacaagattgtgaagaagctaggaattcgaggcatctttgaggtctat 11516432

                     
Query: 387      ccata 391
                |||||
Sbjct: 11516431 ccata 11516427



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 338      ctataagattgtcaagaagctgggagctcgag 369
                |||||||||||| |||| ||| ||||||||||
Sbjct: 11569867 ctataagattgtgaagatgcttggagctcgag 11569836



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                                
Query: 48       ggtgacctgttccacgtcgtcccacctgctcaagccgtgttgctcaag 95
                |||||| |||||| || | |||||||||||||||| ||  ||||||||
Sbjct: 11410109 ggtgacatgttccgcgccatcccacctgctcaagctgtcatgctcaag 11410062
to top
>dbj|AK061247.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-E05, full
           insert sequence
          Length = 1262

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 68/80 (85%)
 Strand = Plus / Plus

                                                                       
Query: 48  ggtgacctgttccacgtcgtcccacctgctcaagccgtgttgctcaagcttgttctgcac 107
           |||||| |||||| || | |||||||||||||||| ||  ||||||||||||| || |||
Sbjct: 827 ggtgacatgttccgcgccatcccacctgctcaagctgtcatgctcaagcttgtgcttcac 886

                               
Query: 108 ttctggagcgacgaggattg 127
             |||||| |||||||||||
Sbjct: 887 cactggagtgacgaggattg 906



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                               
Query: 338  ctataagattgtcaagaagctgggagctcgagctgtcattgaggtctatcc 388
            |||||||||||| || ||  || |||||||||||||| |||||||||||||
Sbjct: 1117 ctataagattgtgaaaaaattgagagctcgagctgtctttgaggtctatcc 1167
to top
>gb|AY107519.1| Zea mays PCO078033 mRNA sequence
          Length = 1299

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                               
Query: 88  tgctcaagcttgttctgcacttctggagcgacgaggattgcatcaagatcct 139
           |||||||||| || |||||||||||||||||||| || ||| ||||||||||
Sbjct: 802 tgctcaagctcgtcctgcacttctggagcgacgacgactgcgtcaagatcct 853



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 65/79 (82%)
 Strand = Plus / Plus

                                                                        
Query: 312  atcttcaccaaggctggcttcagtggctataagattgtcaagaagctgggagctcgagct 371
            ||||| |||||||||||||||   | ||| ||| ||||||||||  | |||||||| | |
Sbjct: 1029 atctttaccaaggctggcttctccgactacaaggttgtcaagaaaatcggagctcgtggt 1088

                               
Query: 372  gtcattgaggtctatccat 390
            ||||| |||||||| ||||
Sbjct: 1089 gtcatcgaggtctacccat 1107
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>gb|AC138195.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0005P21, complete sequence
          Length = 147381

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 51/58 (87%)
 Strand = Plus / Plus

                                                                       
Query: 330   ttcagtggctataagattgtcaagaagctgggagctcgagctgtcattgaggtctatc 387
             ||||||| |||||||||||| ||||| || || |||||||||||| | ||||||||||
Sbjct: 64416 ttcagtgactataagattgtgaagaaacttggtgctcgagctgtcttcgaggtctatc 64473



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                          
Query: 33     gttaagtatgtttctggtgacctgttccacgtcgtcccacctgctcaagccgtgttgctc 92
              ||||| |||||| | |||||| ||||||||  ||| ||||| |||||||||||| |||||
Sbjct: 119635 gttaactatgttgcaggtgacttgttccacaccgtgccaccggctcaagccgtgatgctc 119694

                 
Query: 93     aag 95
              |||
Sbjct: 119695 aag 119697



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 63/77 (81%)
 Strand = Plus / Minus

                                                                          
Query: 309    gagatcttcaccaaggctggcttcagtggctataagattgtcaagaagctgggagctcga 368
              ||||||||||| || ||||| ||||| | ||| |||||  | || || || |||||||||
Sbjct: 128360 gagatcttcactaatgctggattcagcgactacaagatcatgaacaaactaggagctcga 128301

                               
Query: 369    gctgtcattgaggtcta 385
                |||||||||||||||
Sbjct: 128300 tgtgtcattgaggtcta 128284



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 338    ctataagattgtcaagaagctgggagctcgag 369
              |||||||||||| |||| ||| ||||||||||
Sbjct: 123110 ctataagattgtgaagatgcttggagctcgag 123141
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>gb|AC135793.4| Oryza sativa chromosome 11 BAC clone OSJNBb0017P15, complete sequence
          Length = 128418

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                        
Query: 33   gttaagtatgtttctggtgacctgttccacgtcgtcccacctgctcaagccgtgttgctc 92
            ||||| |||||| | |||||| ||||||||  ||| ||||| |||||||||||| |||||
Sbjct: 5384 gttaactatgttgcaggtgacttgttccacaccgtgccaccggctcaagccgtgatgctc 5443

               
Query: 93   aag 95
            |||
Sbjct: 5444 aag 5446



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                         
Query: 327   ggcttcagtggctataagattgtcaagaagctgggagctcgagctgtcattgaggtctat 386
             ||||||||||  || |||||||| |||||||| |||  |||||   || |||||||||||
Sbjct: 62235 ggcttcagtgattacaagattgtgaagaagctaggaattcgaggcatctttgaggtctat 62294

                  
Query: 387   ccata 391
             |||||
Sbjct: 62295 ccata 62299



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 63/77 (81%)
 Strand = Plus / Minus

                                                                         
Query: 309   gagatcttcaccaaggctggcttcagtggctataagattgtcaagaagctgggagctcga 368
             ||||||||||| || ||||| ||||| | ||| |||||  | || || || |||||||||
Sbjct: 14109 gagatcttcactaatgctggattcagcgactacaagatcatgaacaaactaggagctcga 14050

                              
Query: 369   gctgtcattgaggtcta 385
               |||||||||||||||
Sbjct: 14049 tgtgtcattgaggtcta 14033



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 338  ctataagattgtcaagaagctgggagctcgag 369
            |||||||||||| |||| ||| ||||||||||
Sbjct: 8859 ctataagattgtgaagatgcttggagctcgag 8890
to top
>ref|XM_477999.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1083

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 171 gaagcaggagggaaagtcatcgtcatagacattgtgcttggatc 214
           |||||||||||||| ||||| ||||||||  ||||| |||||||
Sbjct: 859 gaagcaggagggaaggtcattgtcatagatgttgtggttggatc 902
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                            
Query: 171      gaagcaggagggaaagtcatcgtcatagacattgtgcttggatc 214
                |||||||||||||| ||||| ||||||||  ||||| |||||||
Sbjct: 16261777 gaagcaggagggaaggtcattgtcatagatgttgtggttggatc 16261734
to top
>dbj|AP003916.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1634_H04
          Length = 151699

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                         
Query: 171   gaagcaggagggaaagtcatcgtcatagacattgtgcttggatc 214
             |||||||||||||| ||||| ||||||||  ||||| |||||||
Sbjct: 82215 gaagcaggagggaaggtcattgtcatagatgttgtggttggatc 82172
to top
>ref|XM_474642.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 870

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 116 cgacgaggattgcatcaagatcctc 140
           ||||||||| |||||||||||||||
Sbjct: 591 cgacgaggactgcatcaagatcctc 615
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>gb|AC101777.8| Mus musculus chromosome 1, clone RP24-123J3, complete sequence
          Length = 177788

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 436    attgttgtgtgtgctcactct 456
              |||||||||||||||||||||
Sbjct: 156151 attgttgtgtgtgctcactct 156171
to top
>ref|XM_746399.1| Aspergillus fumigatus Af293 actin-related protein ArpA (Afu4g13390)
           partial mRNA
          Length = 1146

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 286 agcgggaagagaaggactgga 306
           |||||||||||||||||||||
Sbjct: 680 agcgggaagagaaggactgga 700
to top
>ref|XM_501466.1| Yarrowia lipolytica CLIB122, YALI0C05258g predicted mRNA
          Length = 1599

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 294 gagaaggactggaacgagatcttcaccaa 322
           |||||||||||||||| |||| |||||||
Sbjct: 451 gagaaggactggaacgtgatcatcaccaa 479
to top
>emb|AL731589.3|OSJN00239 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039G19,
              complete sequence
          Length = 144144

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 116    cgacgaggattgcatcaagatcctc 140
              ||||||||| |||||||||||||||
Sbjct: 131110 cgacgaggactgcatcaagatcctc 131086
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 116     cgacgaggattgcatcaagatcctc 140
               ||||||||| |||||||||||||||
Sbjct: 5154837 cgacgaggactgcatcaagatcctc 5154813
to top
>gb|AC131072.13| Mus musculus chromosome 1, clone RP23-396F21, complete sequence
          Length = 192542

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 436    attgttgtgtgtgctcactct 456
              |||||||||||||||||||||
Sbjct: 174571 attgttgtgtgtgctcactct 174551
to top
>dbj|AK109384.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-A06, full
            insert sequence
          Length = 1300

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 63/77 (81%)
 Strand = Plus / Plus

                                                                        
Query: 309  gagatcttcaccaaggctggcttcagtggctataagattgtcaagaagctgggagctcga 368
            ||||||||||| || ||||| ||||| | ||| |||||  | || || || |||||||||
Sbjct: 1108 gagatcttcactaatgctggattcagcgactacaagatcatgaacaaactaggagctcga 1167

                             
Query: 369  gctgtcattgaggtcta 385
              |||||||||||||||
Sbjct: 1168 tgtgtcattgaggtcta 1184
to top
>gb|AC174827.3| Cavia porcellus clone CH234-477P24, complete sequence
          Length = 156330

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 404   caaagtaatatatgcttgcatatatgttg 432
             ||||||||| ||||||||||||| |||||
Sbjct: 89623 caaagtaatttatgcttgcatatgtgttg 89651
to top
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica
          Length = 3272609

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 294    gagaaggactggaacgagatcttcaccaa 322
              |||||||||||||||| |||| |||||||
Sbjct: 668191 gagaaggactggaacgtgatcatcaccaa 668163
to top
>gb|AC134248.3| Mus musculus BAC clone RP23-338G21 from chromosome 9, complete
            sequence
          Length = 206805

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 262  tgctggtgatgacgagaggc 281
            ||||||||||||||||||||
Sbjct: 5565 tgctggtgatgacgagaggc 5546
to top
>ref|XM_989083.1| PREDICTED: Mus musculus transglutaminase 4 (prostate) (Tgm4), mRNA
          Length = 5470

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 262  tgctggtgatgacgagaggc 281
            ||||||||||||||||||||
Sbjct: 1498 tgctggtgatgacgagaggc 1479
to top
>emb|AL591804.5| Human DNA sequence from clone RP11-457O1 on chromosome X, complete
             sequence
          Length = 112366

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 571   tggaaaaagatagtatgcag 590
             ||||||||||||||||||||
Sbjct: 90032 tggaaaaagatagtatgcag 90051
to top
>ref|XM_791236.1| PREDICTED: Strongylocentrotus purpuratus similar to HBS1-like protein
            (LOC591684), partial mRNA
          Length = 3640

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 345  attgtcaagaagctgggagc 364
            ||||||||||||||||||||
Sbjct: 3409 attgtcaagaagctgggagc 3428
to top
>emb|AL353701.15| Human DNA sequence from clone RP11-203M2 on chromosome 9 Contains the
             TTF1 gene for transcription termination factor, RNA
             polymerase 1, a novel gene and three CpG islands, complete
             sequence
          Length = 107967

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 148   gcaggaaggccgttcctcca 167
             ||||||||||||||||||||
Sbjct: 96716 gcaggaaggccgttcctcca 96735
to top
>gb|AC011291.8| Homo sapiens BAC clone RP11-67G7 from 2, complete sequence
          Length = 150214

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 589   agttagactgcttttcatattcta 612
             ||||||||||||| ||||||||||
Sbjct: 57298 agttagactgcttatcatattcta 57275
to top
>gb|AC012495.9| Homo sapiens BAC clone RP11-327F6 from 2, complete sequence
          Length = 215359

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 161   tcctccacgtgaagcaggag 180
             ||||||||||||||||||||
Sbjct: 66509 tcctccacgtgaagcaggag 66490
to top
>emb|BX511027.20| Zebrafish DNA sequence from clone CH211-281P14 in linkage group 14,
             complete sequence
          Length = 198761

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 97    ttgttctgcacttctggagc 116
             ||||||||||||||||||||
Sbjct: 96200 ttgttctgcacttctggagc 96219
to top
>dbj|AK035279.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length
            enriched library, clone:9530008N10 product:similar to
            DORSAL PROSTATE PROTEIN-GLUTAMINE
            GAMMA-GLUTAMYLTRANSFERASE (EC 2.3.2.13) (DORSAL PROSTATE
            TRANSGLUTAMINASE) (DORSAL PROTEIN 1) (DP1) [Rattus
            norvegicus], full insert sequence
          Length = 2768

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 262  tgctggtgatgacgagaggc 281
            ||||||||||||||||||||
Sbjct: 1850 tgctggtgatgacgagaggc 1831
to top
>gb|AC017087.5|AC017087 Homo sapiens BAC clone RP11-495H13 from 4, complete sequence
          Length = 171745

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 411    atatatgcttgcatatatgt 430
              ||||||||||||||||||||
Sbjct: 144280 atatatgcttgcatatatgt 144261
to top
>emb|BX005328.9| Zebrafish DNA sequence from clone DKEY-63D15 in linkage group 8, complete
              sequence
          Length = 272840

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 421    gcatatatgttgtggattgt 440
              ||||||||||||||||||||
Sbjct: 195139 gcatatatgttgtggattgt 195158
to top
>gb|AC087798.10| Homo sapiens 12 BAC RP11-788H18 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 160095

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 409   taatatatgcttgcatatat 428
             ||||||||||||||||||||
Sbjct: 70151 taatatatgcttgcatatat 70170
to top
>gb|AF486627.1| Mus musculus experimental autoimmune prostatitis antigen 1 (Eapa1)
            mRNA, complete cds
          Length = 2303

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 262  tgctggtgatgacgagaggc 281
            ||||||||||||||||||||
Sbjct: 1848 tgctggtgatgacgagaggc 1829
to top
>dbj|AP001458.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-831H9, complete
             sequence
          Length = 177433

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 320   caaggctggcttcagtggct 339
             ||||||||||||||||||||
Sbjct: 58840 caaggctggcttcagtggct 58859
to top
>gb|AC133650.4| Mus musculus BAC clone RP23-453B15 from 9, complete sequence
          Length = 170607

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 262    tgctggtgatgacgagaggc 281
              ||||||||||||||||||||
Sbjct: 127138 tgctggtgatgacgagaggc 127119
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>ref|NM_177911.2| Mus musculus transglutaminase 4 (prostate) (Tgm4), mRNA
          Length = 2768

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 262  tgctggtgatgacgagaggc 281
            ||||||||||||||||||||
Sbjct: 1850 tgctggtgatgacgagaggc 1831
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>emb|AL672285.8| Mouse DNA sequence from clone RP23-45G5 on chromosome X, complete
              sequence
          Length = 164443

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 411    atatatgcttgcatatatgt 430
              ||||||||||||||||||||
Sbjct: 129297 atatatgcttgcatatatgt 129278
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>emb|AL805949.4| Mouse DNA sequence from clone RP23-424K9 on chromosome 4, complete
             sequence
          Length = 193704

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 409   taatatatgcttgcatatat 428
             ||||||||||||||||||||
Sbjct: 56699 taatatatgcttgcatatat 56680
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>emb|AL645736.9| Mouse DNA sequence from clone RP23-474J7 on chromosome 2, complete
             sequence
          Length = 98571

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 314   cttcaccaaggctggcttcagtgg 337
             |||||||||| |||||||||||||
Sbjct: 32650 cttcaccaagtctggcttcagtgg 32627


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,721,100
Number of Sequences: 3902068
Number of extensions: 5721100
Number of successful extensions: 103835
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 103442
Number of HSP's gapped (non-prelim): 386
length of query: 654
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 631
effective length of database: 17,143,297,704
effective search space: 10817420851224
effective search space used: 10817420851224
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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