ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | basd18m09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY074784.1| Triticum aestivum dehydroascorbate reductase (DHAR) mRNA, complete cds Length = 956 Score = 767 bits (387), Expect = 0.0 Identities = 456/479 (95%) Strand = Plus / Plus Query: 75 cgccaacatgaccgaggtctgcgtcaaggccgccgtcggccaccccgacacgctcggcga 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68 cgccaacatgaccgaggtctgcgtcaaggccgccgtcggccaccccgacacgctcggcga 127 Query: 135 ctgccccttctcgcagagggtgctgctcacgctggaggagaagaaggtgccctacgagat 194 ||| |||||||| |||||||||||||||||| ||||||||||||||||||||||| |||| Sbjct: 128 ctgtcccttctcccagagggtgctgctcacgttggaggagaagaaggtgccctaccagat 187 Query: 195 gaagctcatcgacgtcagcaacaagcccgactggttcctgaagatcaatccagagggcaa 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 188 gaagctcatcgacgtcagcaacaagcccgactggttcctgaagatcaatccagagggcaa 247 Query: 255 ggtgcctgtgtttaacggtggtgatggcaaatggattgctgattctgatgtgattactca 314 ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 248 ggtgcctgtgtataacggtggtgatggcaaatggattgctgattctgatgtgatcactca 307 Query: 315 agtcattgaggagaagtacccaactccatcacttgtgacccctcctgagtatgcatcagt 374 ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 308 agtcattgaggagaagtacccaactccatcacttgtgacccctgctgaatatgcatcagt 367 Query: 375 gggatcaaagatcttctccacctttgtcaccttcttgaagagcaaggacgccagcgatgg 434 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 368 gggatcaaagatcttctccacctttgtcacgttcttgaagagcaaggatgccagcgatgg 427 Query: 435 ctcggagaaggcacttgttgacgagctgcaggcactggaagagcacctaaaggcccatgg 494 |||||||||||||||||||| ||||||||||| || ||||||||||| ||||||||||| Sbjct: 428 ttcggagaaggcacttgttgatgagctgcaggcgctcgaagagcacctgaaggcccatgg 487 Query: 495 accctatatcaacggggcgaatgtctccgccgcggatctcagcttggctccgaagctct 553 |||||| ||||| |||||||| ||||||| | ||||||||| ||||||||||||||| Sbjct: 488 accctacatcaatggggcgaacatctccgctgtcgatctcagcctggctccgaagctct 546
>emb|AJ622892.1| Triticum durum partial mRNA for DRP5 protein (drg5 gene) Length = 478 Score = 682 bits (344), Expect = 0.0 Identities = 401/420 (95%) Strand = Plus / Minus Query: 134 actgccccttctcgcagagggtgctgctcacgctggaggagaagaaggtgccctacgaga 193 |||| |||||||| |||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 478 actgtcccttctcccagagggtgctgctcacgctggaggagaagaaggtgccctaccaga 419 Query: 194 tgaagctcatcgacgtcagcaacaagcccgactggttcctgaagatcaatccagagggca 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 418 tgaagctcatcgacgtcagcaacaagcccgactggttcctgaagatcaatccagagggca 359 Query: 254 aggtgcctgtgtttaacggtggtgatggcaaatggattgctgattctgatgtgattactc 313 |||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 358 aggtgcctgtgtataacggtggtgatggcaaatggattgctgattctgatgtgatcactc 299 Query: 314 aagtcattgaggagaagtacccaactccatcacttgtgacccctcctgagtatgcatcag 373 |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 298 aagtcattgaggagaagtacccaactccatcacttgtgacccctgctgaatatgcatcag 239 Query: 374 tgggatcaaagatcttctccacctttgtcaccttcttgaagagcaaggacgccagcgatg 433 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 238 tgggatcaaagatcttctccacctttgtcacgttcttgaagagcaaggatgccagcgatg 179 Query: 434 gctcggagaaggcacttgttgacgagctgcaggcactggaagagcacctaaaggcccatg 493 | ||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 178 gttcggaaaaggcacttgttgacgagctgcaggcactcgaagagcacctgaaggcccatg 119 Query: 494 gaccctatatcaacggggcgaatgtctccgccgcggatctcagcttggctccgaagctct 553 ||||||| |||||||||||||| ||||||||| ||||||||| ||||||||||||||| Sbjct: 118 gaccctacatcaacggggcgaacatctccgccgtcgatctcagcctggctccgaagctct 59
>gb|AY074786.1| Oryza sativa dehydroascorbate reductase (DHAR) mRNA, complete cds Length = 1067 Score = 450 bits (227), Expect = e-123 Identities = 374/423 (88%) Strand = Plus / Plus Query: 88 gaggtctgcgtcaaggccgccgtcggccaccccgacacgctcggcgactgccccttctcg 147 ||||| |||||||||||||||||||||||||| ||||||||||||||||| || |||||| Sbjct: 89 gaggtgtgcgtcaaggccgccgtcggccacccggacacgctcggcgactgtccattctcg 148 Query: 148 cagagggtgctgctcacgctggaggagaagaaggtgccctacgagatgaagctcatcgac 207 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 149 cagagggtgctgctgactctggaggagaagaaggtgccctacgagatgaagctcatcgac 208 Query: 208 gtcagcaacaagcccgactggttcctgaagatcaatccagagggcaaggtgcctgtgttt 267 ||| ||||||||||||||||| |||||||||| |||||||| ||||||||||||||| Sbjct: 209 gtccagaacaagcccgactggtttctgaagatcagcccagaggggaaggtgcctgtgttt 268 Query: 268 aacggtggtgatggcaaatggattgctgattctgatgtgattactcaagtcattgaggag 327 |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| Sbjct: 269 aacggtggtgatggcaaatggattcctgattctgatgtgatcactcaagtcattgaggag 328 Query: 328 aagtacccaactccatcacttgtgacccctcctgagtatgcatcagtgggatcaaagatc 387 ||||||||||| || || ||||| |||||||||||||||||||||||||||||||| || Sbjct: 329 aagtacccaaccccgtctcttgtcacccctcctgagtatgcatcagtgggatcaaaaatt 388 Query: 388 ttctccacctttgtcaccttcttgaagagcaaggacgccagcgatggctcggagaaggca 447 ||||| ||| || ||||||||||||||||| | | ||||| || ||||||||| Sbjct: 389 ttctcatgcttcacaacgttcttgaagagcaaggatccaaatgatggttcagagaaggca 448 Query: 448 cttgttgacgagctgcaggcactggaagagcacctaaaggcccatggaccctatatcaac 507 ||| || || ||||||||||| || ||||| || || || ||||| |||| ||||||| Sbjct: 449 cttcttactgaactgcaggcactcgaggagcatctgaaagctcatggcccctttatcaac 508 Query: 508 ggg 510 ||| Sbjct: 509 ggg 511
>dbj|AK070895.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023074C02, full insert sequence Length = 1198 Score = 450 bits (227), Expect = e-123 Identities = 374/423 (88%) Strand = Plus / Plus Query: 88 gaggtctgcgtcaaggccgccgtcggccaccccgacacgctcggcgactgccccttctcg 147 ||||| |||||||||||||||||||||||||| ||||||||||||||||| || |||||| Sbjct: 90 gaggtgtgcgtcaaggccgccgtcggccacccggacacgctcggcgactgtccattctcg 149 Query: 148 cagagggtgctgctcacgctggaggagaagaaggtgccctacgagatgaagctcatcgac 207 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 150 cagagggtgctgctgactctggaggagaagaaggtgccctacgagatgaagctcatcgac 209 Query: 208 gtcagcaacaagcccgactggttcctgaagatcaatccagagggcaaggtgcctgtgttt 267 ||| ||||||||||||||||| |||||||||| |||||||| ||||||||||||||| Sbjct: 210 gtccagaacaagcccgactggtttctgaagatcagcccagaggggaaggtgcctgtgttt 269 Query: 268 aacggtggtgatggcaaatggattgctgattctgatgtgattactcaagtcattgaggag 327 |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| Sbjct: 270 aacggtggtgatggcaaatggattcctgattctgatgtgatcactcaagtcattgaggag 329 Query: 328 aagtacccaactccatcacttgtgacccctcctgagtatgcatcagtgggatcaaagatc 387 ||||||||||| || || ||||| |||||||||||||||||||||||||||||||| || Sbjct: 330 aagtacccaaccccgtctcttgtcacccctcctgagtatgcatcagtgggatcaaaaatt 389 Query: 388 ttctccacctttgtcaccttcttgaagagcaaggacgccagcgatggctcggagaaggca 447 ||||| ||| || ||||||||||||||||| | | ||||| || ||||||||| Sbjct: 390 ttctcatgcttcacaacgttcttgaagagcaaggatccaaatgatggttcagagaaggca 449 Query: 448 cttgttgacgagctgcaggcactggaagagcacctaaaggcccatggaccctatatcaac 507 ||| || || ||||||||||| || ||||| || || || ||||| |||| ||||||| Sbjct: 450 cttcttactgaactgcaggcactcgaggagcatctgaaagctcatggcccctttatcaac 509 Query: 508 ggg 510 ||| Sbjct: 510 ggg 512
>dbj|AK061836.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-D08, full insert sequence Length = 1053 Score = 450 bits (227), Expect = e-123 Identities = 374/423 (88%) Strand = Plus / Plus Query: 88 gaggtctgcgtcaaggccgccgtcggccaccccgacacgctcggcgactgccccttctcg 147 ||||| |||||||||||||||||||||||||| ||||||||||||||||| || |||||| Sbjct: 94 gaggtgtgcgtcaaggccgccgtcggccacccggacacgctcggcgactgtccattctcg 153 Query: 148 cagagggtgctgctcacgctggaggagaagaaggtgccctacgagatgaagctcatcgac 207 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 154 cagagggtgctgctgactctggaggagaagaaggtgccctacgagatgaagctcatcgac 213 Query: 208 gtcagcaacaagcccgactggttcctgaagatcaatccagagggcaaggtgcctgtgttt 267 ||| ||||||||||||||||| |||||||||| |||||||| ||||||||||||||| Sbjct: 214 gtccagaacaagcccgactggtttctgaagatcagcccagaggggaaggtgcctgtgttt 273 Query: 268 aacggtggtgatggcaaatggattgctgattctgatgtgattactcaagtcattgaggag 327 |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| Sbjct: 274 aacggtggtgatggcaaatggattcctgattctgatgtgatcactcaagtcattgaggag 333 Query: 328 aagtacccaactccatcacttgtgacccctcctgagtatgcatcagtgggatcaaagatc 387 ||||||||||| || || ||||| |||||||||||||||||||||||||||||||| || Sbjct: 334 aagtacccaaccccgtctcttgtcacccctcctgagtatgcatcagtgggatcaaaaatt 393 Query: 388 ttctccacctttgtcaccttcttgaagagcaaggacgccagcgatggctcggagaaggca 447 ||||| ||| || ||||||||||||||||| | | ||||| || ||||||||| Sbjct: 394 ttctcatgcttcacaacgttcttgaagagcaaggatccaaatgatggttcagagaaggca 453 Query: 448 cttgttgacgagctgcaggcactggaagagcacctaaaggcccatggaccctatatcaac 507 ||| || || ||||||||||| || ||||| || || || ||||| |||| ||||||| Sbjct: 454 cttcttactgaactgcaggcactcgaggagcatctgaaagctcatggcccctttatcaac 513 Query: 508 ggg 510 ||| Sbjct: 514 ggg 516
>dbj|AB037970.1| Oryza sativa (japonica cultivar-group) DHAR1 mRNA for GSH-dependent dehydroascorbate reductase 1, complete cds Length = 1044 Score = 442 bits (223), Expect = e-121 Identities = 373/423 (88%) Strand = Plus / Plus Query: 88 gaggtctgcgtcaaggccgccgtcggccaccccgacacgctcggcgactgccccttctcg 147 ||||| |||||||||||||||||||||||||| ||||||||||||||||| || |||||| Sbjct: 59 gaggtgtgcgtcaaggccgccgtcggccacccggacacgctcggcgactgtccattctcg 118 Query: 148 cagagggtgctgctcacgctggaggagaagaaggtgccctacgagatgaagctcatcgac 207 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 119 cagagggtgctgctgactctggaggagaagaaggtgccctacgagatgaagctcatcgac 178 Query: 208 gtcagcaacaagcccgactggttcctgaagatcaatccagagggcaaggtgcctgtgttt 267 ||| ||||| ||||||||||| |||||||||| |||||||| ||||||||||||||| Sbjct: 179 gtccagaacaaccccgactggtttctgaagatcagcccagaggggaaggtgcctgtgttt 238 Query: 268 aacggtggtgatggcaaatggattgctgattctgatgtgattactcaagtcattgaggag 327 |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| Sbjct: 239 aacggtggtgatggcaaatggattcctgattctgatgtgatcactcaagtcattgaggag 298 Query: 328 aagtacccaactccatcacttgtgacccctcctgagtatgcatcagtgggatcaaagatc 387 ||||||||||| || || ||||| |||||||||||||||||||||||||||||||| || Sbjct: 299 aagtacccaaccccgtctcttgtcacccctcctgagtatgcatcagtgggatcaaaaatt 358 Query: 388 ttctccacctttgtcaccttcttgaagagcaaggacgccagcgatggctcggagaaggca 447 ||||| ||| || ||||||||||||||||| | | ||||| || ||||||||| Sbjct: 359 ttctcatgcttcacaacgttcttgaagagcaaggatccaaatgatggttcagagaaggca 418 Query: 448 cttgttgacgagctgcaggcactggaagagcacctaaaggcccatggaccctatatcaac 507 ||| || || ||||||||||| || ||||| || || || ||||| |||| ||||||| Sbjct: 419 cttcttactgaactgcaggcactcgaggagcatctgaaagctcatggcccctttatcaac 478 Query: 508 ggg 510 ||| Sbjct: 479 ggg 481
>gb|AY106435.1| Zea mays PCO106999 mRNA sequence Length = 1141 Score = 377 bits (190), Expect = e-101 Identities = 337/386 (87%) Strand = Plus / Plus Query: 88 gaggtctgcgtcaaggccgccgtcggccaccccgacacgctcggcgactgccccttctcg 147 ||||| ||||| |||||||||| || ||||||||||||||||||| ||||| |||||| Sbjct: 103 gaggtgtgcgtgaaggccgccgcggggaaccccgacacgctcggcgattgcccgttctcg 162 Query: 148 cagagggtgctgctcacgctggaggagaagaaggtgccctacgagatgaagctcatcgac 207 ||||||||||||||||||||||||||||||||||| || |||||| |||||||| ||||| Sbjct: 163 cagagggtgctgctcacgctggaggagaagaaggtcccgtacgaggtgaagctcgtcgac 222 Query: 208 gtcagcaacaagcccgactggttcctgaagatcaatccagagggcaaggtgcctgtgttt 267 || ||||||||||||| ||||| ||||| |||| |||||||| ||||||||| |||| Sbjct: 223 ctcggcaacaagcccgaatggtttctgaacatcagcccagagggtaaggtgcctttgttc 282 Query: 268 aacggtggtgatggcaaatggattgctgattctgatgtgattactcaagtcattgaggag 327 |||||||| ||||||||||| ||||||||||||||||| || || ||||||||||||||| Sbjct: 283 aacggtggagatggcaaatgcattgctgattctgatgtaatcacccaagtcattgaggag 342 Query: 328 aagtacccaactccatcacttgtgacccctcctgagtatgcatcagtgggatcaaagatc 387 |||| ||||||||| || || || |||||||| || ||||||||||||||||||||||| Sbjct: 343 aagttcccaactccttctctggtcacccctccagaatatgcatcagtgggatcaaagatt 402 Query: 388 ttctccacctttgtcaccttcttgaagagcaaggacgccagcgatggctcggagaaggca 447 ||| | ||||||||| ||||||||||||||||| || || ||||| || |||||||| Sbjct: 403 ttcccagcctttgtcaagttcttgaagagcaaggatgctagtgatgggtcagagaaggcg 462 Query: 448 cttgttgacgagctgcaggcactgga 473 ||| | || ||||||||||||||||| Sbjct: 463 cttctggatgagctgcaggcactgga 488
>gb|AC078977.6| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0496H07, complete sequence Length = 164477 Score = 216 bits (109), Expect = 6e-53 Identities = 139/149 (93%) Strand = Plus / Minus Query: 227 ggttcctgaagatcaatccagagggcaaggtgcctgtgtttaacggtggtgatggcaaat 286 |||| |||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 51952 ggtttctgaagatcagcccagaggggaaggtgcctgtgtttaacggtggtgatggcaaat 51893 Query: 287 ggattgctgattctgatgtgattactcaagtcattgaggagaagtacccaactccatcac 346 ||||| |||||||||||||||| ||||||||||||||||||||||||||||| || || | Sbjct: 51892 ggattcctgattctgatgtgatcactcaagtcattgaggagaagtacccaaccccgtctc 51833 Query: 347 ttgtgacccctcctgagtatgcatcagtg 375 |||| |||||||||||||||||||||||| Sbjct: 51832 ttgtcacccctcctgagtatgcatcagtg 51804 Score = 135 bits (68), Expect = 2e-28 Identities = 83/88 (94%) Strand = Plus / Minus Query: 142 ttctcgcagagggtgctgctcacgctggaggagaagaaggtgccctacgagatgaagctc 201 |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 53269 ttctcgcagagggtgctgctgactctggaggagaagaaggtgccctacgagatgaagctc 53210 Query: 202 atcgacgtcagcaacaagcccgactggt 229 ||||||||| |||||||||||||||| Sbjct: 53209 atcgacgtccagaacaagcccgactggt 53182 Score = 83.8 bits (42), Expect = 6e-13 Identities = 48/50 (96%) Strand = Plus / Minus Query: 88 gaggtctgcgtcaaggccgccgtcggccaccccgacacgctcggcgactg 137 ||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 53430 gaggtgtgcgtcaaggccgccgtcggccacccggacacgctcggcgactg 53381
>gb|AC108504.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1654_B10, complete sequence Length = 140282 Score = 216 bits (109), Expect = 6e-53 Identities = 139/149 (93%) Strand = Plus / Minus Query: 227 ggttcctgaagatcaatccagagggcaaggtgcctgtgtttaacggtggtgatggcaaat 286 |||| |||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 119971 ggtttctgaagatcagcccagaggggaaggtgcctgtgtttaacggtggtgatggcaaat 119912 Query: 287 ggattgctgattctgatgtgattactcaagtcattgaggagaagtacccaactccatcac 346 ||||| |||||||||||||||| ||||||||||||||||||||||||||||| || || | Sbjct: 119911 ggattcctgattctgatgtgatcactcaagtcattgaggagaagtacccaaccccgtctc 119852 Query: 347 ttgtgacccctcctgagtatgcatcagtg 375 |||| |||||||||||||||||||||||| Sbjct: 119851 ttgtcacccctcctgagtatgcatcagtg 119823 Score = 135 bits (68), Expect = 2e-28 Identities = 83/88 (94%) Strand = Plus / Minus Query: 142 ttctcgcagagggtgctgctcacgctggaggagaagaaggtgccctacgagatgaagctc 201 |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 121288 ttctcgcagagggtgctgctgactctggaggagaagaaggtgccctacgagatgaagctc 121229 Query: 202 atcgacgtcagcaacaagcccgactggt 229 ||||||||| |||||||||||||||| Sbjct: 121228 atcgacgtccagaacaagcccgactggt 121201 Score = 83.8 bits (42), Expect = 6e-13 Identities = 48/50 (96%) Strand = Plus / Minus Query: 88 gaggtctgcgtcaaggccgccgtcggccaccccgacacgctcggcgactg 137 ||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 121449 gaggtgtgcgtcaaggccgccgtcggccacccggacacgctcggcgactg 121400
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 216 bits (109), Expect = 6e-53 Identities = 139/149 (93%) Strand = Plus / Minus Query: 227 ggttcctgaagatcaatccagagggcaaggtgcctgtgtttaacggtggtgatggcaaat 286 |||| |||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 847529 ggtttctgaagatcagcccagaggggaaggtgcctgtgtttaacggtggtgatggcaaat 847470 Query: 287 ggattgctgattctgatgtgattactcaagtcattgaggagaagtacccaactccatcac 346 ||||| |||||||||||||||| ||||||||||||||||||||||||||||| || || | Sbjct: 847469 ggattcctgattctgatgtgatcactcaagtcattgaggagaagtacccaaccccgtctc 847410 Query: 347 ttgtgacccctcctgagtatgcatcagtg 375 |||| |||||||||||||||||||||||| Sbjct: 847409 ttgtcacccctcctgagtatgcatcagtg 847381 Score = 135 bits (68), Expect = 2e-28 Identities = 83/88 (94%) Strand = Plus / Minus Query: 142 ttctcgcagagggtgctgctcacgctggaggagaagaaggtgccctacgagatgaagctc 201 |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 848846 ttctcgcagagggtgctgctgactctggaggagaagaaggtgccctacgagatgaagctc 848787 Query: 202 atcgacgtcagcaacaagcccgactggt 229 ||||||||| |||||||||||||||| Sbjct: 848786 atcgacgtccagaacaagcccgactggt 848759 Score = 83.8 bits (42), Expect = 6e-13 Identities = 48/50 (96%) Strand = Plus / Minus Query: 88 gaggtctgcgtcaaggccgccgtcggccaccccgacacgctcggcgactg 137 ||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 849007 gaggtgtgcgtcaaggccgccgtcggccacccggacacgctcggcgactg 848958 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 57 cgccgccgccaacgccaacgccaa 80 |||||||||||||||||||||||| Sbjct: 2340295 cgccgccgccaacgccaacgccaa 2340318 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 56 ccgccgccgccaacgccaacgcc 78 ||||||||||||||||||||||| Sbjct: 27314248 ccgccgccgccaacgccaacgcc 27314226 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 53 cccccgccgccgccaacgccaacgccaa 80 |||||||||||||| |||||||||||| Sbjct: 18798003 cccccgccgccgccgccgccaacgccaa 18797976
>gb|DQ430382.1| Sorghum propinquum locus pSB1945 genomic sequence Length = 610 Score = 81.8 bits (41), Expect = 2e-12 Identities = 89/105 (84%) Strand = Plus / Plus Query: 375 gggatcaaagatcttctccacctttgtcaccttcttgaagagcaaggacgccagcgatgg 434 |||||||||||| ||| | ||||||||| ||||||||||||||||| || || ||||| Sbjct: 493 gggatcaaagattttcccagcctttgtcaagttcttgaagagcaaggatgctagtgatgg 552 Query: 435 ctcggagaaggcacttgttgacgagctgcaggcactggaagagca 479 || |||||||| ||| | || ||||||||||||||||| ||||| Sbjct: 553 ttcagagaaggcgcttctggatgagctgcaggcactggatgagca 597
>gb|DQ430381.1| Sorghum bicolor voucher PI585454 locus pSB1945 genomic sequence Length = 618 Score = 81.8 bits (41), Expect = 2e-12 Identities = 89/105 (84%) Strand = Plus / Plus Query: 375 gggatcaaagatcttctccacctttgtcaccttcttgaagagcaaggacgccagcgatgg 434 |||||||||||| ||| | ||||||||| ||||||||||||||||| || || ||||| Sbjct: 501 gggatcaaagattttcccagcctttgtcaagttcttgaagagcaaggatgctagtgatgg 560 Query: 435 ctcggagaaggcacttgttgacgagctgcaggcactggaagagca 479 || |||||||| ||| | || ||||||||||||||||| ||||| Sbjct: 561 ttcagagaaggcgcttctggatgagctgcaggcactggatgagca 605
>gb|DQ430380.1| Sorghum bicolor voucher PI267539 locus pSB1945 genomic sequence Length = 798 Score = 81.8 bits (41), Expect = 2e-12 Identities = 89/105 (84%) Strand = Plus / Plus Query: 375 gggatcaaagatcttctccacctttgtcaccttcttgaagagcaaggacgccagcgatgg 434 |||||||||||| ||| | ||||||||| ||||||||||||||||| || || ||||| Sbjct: 681 gggatcaaagattttcccagcctttgtcaagttcttgaagagcaaggatgctagtgatgg 740 Query: 435 ctcggagaaggcacttgttgacgagctgcaggcactggaagagca 479 || |||||||| ||| | || ||||||||||||||||| ||||| Sbjct: 741 ttcagagaaggcgcttctggatgagctgcaggcactggatgagca 785
>gb|DQ430378.1| Sorghum bicolor voucher PI221607 locus pSB1945 genomic sequence Length = 798 Score = 81.8 bits (41), Expect = 2e-12 Identities = 89/105 (84%) Strand = Plus / Plus Query: 375 gggatcaaagatcttctccacctttgtcaccttcttgaagagcaaggacgccagcgatgg 434 |||||||||||| ||| | ||||||||| ||||||||||||||||| || || ||||| Sbjct: 681 gggatcaaagattttcccagcctttgtcaagttcttgaagagcaaggatgctagtgatgg 740 Query: 435 ctcggagaaggcacttgttgacgagctgcaggcactggaagagca 479 || |||||||| ||| | || ||||||||||||||||| ||||| Sbjct: 741 ttcagagaaggcgcttctggatgagctgcaggcactggatgagca 785
>gb|DQ430377.1| Sorghum bicolor voucher PI152702 locus pSB1945 genomic sequence Length = 798 Score = 81.8 bits (41), Expect = 2e-12 Identities = 89/105 (84%) Strand = Plus / Plus Query: 375 gggatcaaagatcttctccacctttgtcaccttcttgaagagcaaggacgccagcgatgg 434 |||||||||||| ||| | ||||||||| ||||||||||||||||| || || ||||| Sbjct: 681 gggatcaaagattttcccagcctttgtcaagttcttgaagagcaaggatgctagtgatgg 740 Query: 435 ctcggagaaggcacttgttgacgagctgcaggcactggaagagca 479 || |||||||| ||| | || ||||||||||||||||| ||||| Sbjct: 741 ttcagagaaggcgcttctggatgagctgcaggcactggatgagca 785
>gb|DQ430376.1| Sorghum bicolor voucher NSL92371 locus pSB1945 genomic sequence Length = 798 Score = 81.8 bits (41), Expect = 2e-12 Identities = 89/105 (84%) Strand = Plus / Plus Query: 375 gggatcaaagatcttctccacctttgtcaccttcttgaagagcaaggacgccagcgatgg 434 |||||||||||| ||| | ||||||||| ||||||||||||||||| || || ||||| Sbjct: 681 gggatcaaagattttcccagcctttgtcaagttcttgaagagcaaggatgctagtgatgg 740 Query: 435 ctcggagaaggcacttgttgacgagctgcaggcactggaagagca 479 || |||||||| ||| | || ||||||||||||||||| ||||| Sbjct: 741 ttcagagaaggcgcttctggatgagctgcaggcactggatgagca 785
>gb|DQ430375.1| Sorghum bicolor voucher NSL87902 locus pSB1945 genomic sequence Length = 798 Score = 81.8 bits (41), Expect = 2e-12 Identities = 89/105 (84%) Strand = Plus / Plus Query: 375 gggatcaaagatcttctccacctttgtcaccttcttgaagagcaaggacgccagcgatgg 434 |||||||||||| ||| | ||||||||| ||||||||||||||||| || || ||||| Sbjct: 681 gggatcaaagattttcccagcctttgtcaagttcttgaagagcaaggatgctagtgatgg 740 Query: 435 ctcggagaaggcacttgttgacgagctgcaggcactggaagagca 479 || |||||||| ||| | || ||||||||||||||||| ||||| Sbjct: 741 ttcagagaaggcgcttctggatgagctgcaggcactggatgagca 785
>gb|DQ430374.1| Sorghum bicolor voucher NSL87666 locus pSB1945 genomic sequence Length = 798 Score = 81.8 bits (41), Expect = 2e-12 Identities = 89/105 (84%) Strand = Plus / Plus Query: 375 gggatcaaagatcttctccacctttgtcaccttcttgaagagcaaggacgccagcgatgg 434 |||||||||||| ||| | ||||||||| ||||||||||||||||| || || ||||| Sbjct: 681 gggatcaaagattttcccagcctttgtcaagttcttgaagagcaaggatgctagtgatgg 740 Query: 435 ctcggagaaggcacttgttgacgagctgcaggcactggaagagca 479 || |||||||| ||| | || ||||||||||||||||| ||||| Sbjct: 741 ttcagagaaggcgcttctggatgagctgcaggcactggatgagca 785
>gb|DQ430373.1| Sorghum bicolor voucher NSL77217 locus pSB1945 genomic sequence Length = 798 Score = 81.8 bits (41), Expect = 2e-12 Identities = 89/105 (84%) Strand = Plus / Plus Query: 375 gggatcaaagatcttctccacctttgtcaccttcttgaagagcaaggacgccagcgatgg 434 |||||||||||| ||| | ||||||||| ||||||||||||||||| || || ||||| Sbjct: 681 gggatcaaagattttcccagcctttgtcaagttcttgaagagcaaggatgctagtgatgg 740 Query: 435 ctcggagaaggcacttgttgacgagctgcaggcactggaagagca 479 || |||||||| ||| | || ||||||||||||||||| ||||| Sbjct: 741 ttcagagaaggcgcttctggatgagctgcaggcactggatgagca 785
>gb|DQ430372.1| Sorghum bicolor voucher NSL77034 locus pSB1945 genomic sequence Length = 798 Score = 81.8 bits (41), Expect = 2e-12 Identities = 89/105 (84%) Strand = Plus / Plus Query: 375 gggatcaaagatcttctccacctttgtcaccttcttgaagagcaaggacgccagcgatgg 434 |||||||||||| ||| | ||||||||| ||||||||||||||||| || || ||||| Sbjct: 681 gggatcaaagattttcccagcctttgtcaagttcttgaagagcaaggatgctagtgatgg 740 Query: 435 ctcggagaaggcacttgttgacgagctgcaggcactggaagagca 479 || |||||||| ||| | || ||||||||||||||||| ||||| Sbjct: 741 ttcagagaaggcgcttctggatgagctgcaggcactggatgagca 785
>gb|DQ430371.1| Sorghum bicolor voucher NSL56174 locus pSB1945 genomic sequence Length = 798 Score = 81.8 bits (41), Expect = 2e-12 Identities = 89/105 (84%) Strand = Plus / Plus Query: 375 gggatcaaagatcttctccacctttgtcaccttcttgaagagcaaggacgccagcgatgg 434 |||||||||||| ||| | ||||||||| ||||||||||||||||| || || ||||| Sbjct: 681 gggatcaaagattttcccagcctttgtcaagttcttgaagagcaaggatgctagtgatgg 740 Query: 435 ctcggagaaggcacttgttgacgagctgcaggcactggaagagca 479 || |||||||| ||| | || ||||||||||||||||| ||||| Sbjct: 741 ttcagagaaggcgcttctggatgagctgcaggcactggatgagca 785
>gb|DQ430370.1| Sorghum bicolor voucher NSL56003 locus pSB1945 genomic sequence Length = 798 Score = 81.8 bits (41), Expect = 2e-12 Identities = 89/105 (84%) Strand = Plus / Plus Query: 375 gggatcaaagatcttctccacctttgtcaccttcttgaagagcaaggacgccagcgatgg 434 |||||||||||| ||| | ||||||||| ||||||||||||||||| || || ||||| Sbjct: 681 gggatcaaagattttcccagcctttgtcaagttcttgaagagcaaggatgctagtgatgg 740 Query: 435 ctcggagaaggcacttgttgacgagctgcaggcactggaagagca 479 || |||||||| ||| | || ||||||||||||||||| ||||| Sbjct: 741 ttcagagaaggcgcttctggatgagctgcaggcactggatgagca 785
>gb|DQ430369.1| Sorghum bicolor voucher NSL55243 locus pSB1945 genomic sequence Length = 798 Score = 81.8 bits (41), Expect = 2e-12 Identities = 89/105 (84%) Strand = Plus / Plus Query: 375 gggatcaaagatcttctccacctttgtcaccttcttgaagagcaaggacgccagcgatgg 434 |||||||||||| ||| | ||||||||| ||||||||||||||||| || || ||||| Sbjct: 681 gggatcaaagattttcccagcctttgtcaagttcttgaagagcaaggatgctagtgatgg 740 Query: 435 ctcggagaaggcacttgttgacgagctgcaggcactggaagagca 479 || |||||||| ||| | || ||||||||||||||||| ||||| Sbjct: 741 ttcagagaaggcgcttctggatgagctgcaggcactggatgagca 785
>gb|DQ430368.1| Sorghum bicolor voucher NSL51365 locus pSB1945 genomic sequence Length = 798 Score = 81.8 bits (41), Expect = 2e-12 Identities = 89/105 (84%) Strand = Plus / Plus Query: 375 gggatcaaagatcttctccacctttgtcaccttcttgaagagcaaggacgccagcgatgg 434 |||||||||||| ||| | ||||||||| ||||||||||||||||| || || ||||| Sbjct: 681 gggatcaaagattttcccagcctttgtcaagttcttgaagagcaaggatgctagtgatgg 740 Query: 435 ctcggagaaggcacttgttgacgagctgcaggcactggaagagca 479 || |||||||| ||| | || ||||||||||||||||| ||||| Sbjct: 741 ttcagagaaggcgcttctggatgagctgcaggcactggatgagca 785
>gb|DQ430367.1| Sorghum bicolor voucher NSL51030 locus pSB1945 genomic sequence Length = 618 Score = 81.8 bits (41), Expect = 2e-12 Identities = 89/105 (84%) Strand = Plus / Plus Query: 375 gggatcaaagatcttctccacctttgtcaccttcttgaagagcaaggacgccagcgatgg 434 |||||||||||| ||| | ||||||||| ||||||||||||||||| || || ||||| Sbjct: 501 gggatcaaagattttcccagcctttgtcaagttcttgaagagcaaggatgctagtgatgg 560 Query: 435 ctcggagaaggcacttgttgacgagctgcaggcactggaagagca 479 || |||||||| ||| | || ||||||||||||||||| ||||| Sbjct: 561 ttcagagaaggcgcttctggatgagctgcaggcactggatgagca 605
>gb|DQ430366.1| Sorghum bicolor voucher NSL50875 locus pSB1945 genomic sequence Length = 798 Score = 81.8 bits (41), Expect = 2e-12 Identities = 89/105 (84%) Strand = Plus / Plus Query: 375 gggatcaaagatcttctccacctttgtcaccttcttgaagagcaaggacgccagcgatgg 434 |||||||||||| ||| | ||||||||| ||||||||||||||||| || || ||||| Sbjct: 681 gggatcaaagattttcccagcctttgtcaagttcttgaagagcaaggatgctagtgatgg 740 Query: 435 ctcggagaaggcacttgttgacgagctgcaggcactggaagagca 479 || |||||||| ||| | || ||||||||||||||||| ||||| Sbjct: 741 ttcagagaaggcgcttctggatgagctgcaggcactggatgagca 785
>gb|DQ430365.1| Sorghum bicolor voucher BTx623 locus pSB1945 genomic sequence Length = 798 Score = 81.8 bits (41), Expect = 2e-12 Identities = 89/105 (84%) Strand = Plus / Plus Query: 375 gggatcaaagatcttctccacctttgtcaccttcttgaagagcaaggacgccagcgatgg 434 |||||||||||| ||| | ||||||||| ||||||||||||||||| || || ||||| Sbjct: 681 gggatcaaagattttcccagcctttgtcaagttcttgaagagcaaggatgctagtgatgg 740 Query: 435 ctcggagaaggcacttgttgacgagctgcaggcactggaagagca 479 || |||||||| ||| | || ||||||||||||||||| ||||| Sbjct: 741 ttcagagaaggcgcttctggatgagctgcaggcactggatgagca 785
>gb|DQ430379.1| Sorghum bicolor voucher PI267408 locus pSB1945 genomic sequence Length = 609 Score = 73.8 bits (37), Expect = 5e-10 Identities = 88/105 (83%) Strand = Plus / Plus Query: 375 gggatcaaagatcttctccacctttgtcaccttcttgaagagcaaggacgccagcgatgg 434 |||||||||||| ||| | ||||||||| ||| ||||||||||||| || || ||||| Sbjct: 492 gggatcaaagattttcccagcctttgtcaagttcctgaagagcaaggatgctagtgatgg 551 Query: 435 ctcggagaaggcacttgttgacgagctgcaggcactggaagagca 479 || |||||||| ||| | || ||||||||||||||||| ||||| Sbjct: 552 ttcagagaaggcgcttctggatgagctgcaggcactggatgagca 596
>emb|AL591783.1|SME591783 Sinorhizobium meliloti 1021 complete chromosome; segment 2/12 Length = 306650 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 213 caacaagcccgactggttcctgaagatc 240 |||||||||||||||||||||||||||| Sbjct: 77599 caacaagcccgactggttcctgaagatc 77572
>gb|AF321273.1|AF321273 Lolium temulentum FLORICAULA/LEAFY-like protein mRNA, complete cds Length = 1527 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 56 ccgccgccgccaacgccaacgccaac 81 |||||||||||||||||||||||||| Sbjct: 1212 ccgccgccgccaacgccaacgccaac 1237
>gb|AY823555.1| Pennisetum glaucum dehydroascorbate reductase mRNA, partial cds Length = 369 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 282 caaatggattgctgattctgatgt 305 |||||||||||||||||||||||| Sbjct: 24 caaatggattgctgattctgatgt 47
>ref|XM_550074.1| Oryza sativa (japonica cultivar-group), mRNA Length = 303 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Minus Query: 57 cgccgccgccaacgccaacgccaa 80 |||||||||||||||||||||||| Sbjct: 49 cgccgccgccaacgccaacgccaa 26
>gb|AC104277.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1264_A04, complete sequence Length = 133271 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 57 cgccgccgccaacgccaacgccaa 80 |||||||||||||||||||||||| Sbjct: 15895 cgccgccgccaacgccaacgccaa 15918
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 48.1 bits (24), Expect = 0.031 Identities = 45/52 (86%) Strand = Plus / Minus Query: 284 aatggattgctgattctgatgtgattactcaagtcattgaggagaagtaccc 335 ||||| |||||||||||||||| ||||| |||| || || ||||||||||| Sbjct: 6905125 aatgggttgctgattctgatgttattacacaagcgatagaagagaagtaccc 6905074 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 57 cgccgccgccaacgccaacgcc 78 |||||||||||||||||||||| Sbjct: 29820478 cgccgccgccaacgccaacgcc 29820457 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 56 ccgccgccgccaacgccaacgccaac 81 ||||||||||||| |||||||||||| Sbjct: 5642129 ccgccgccgccaatgccaacgccaac 5642154 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 51 tccccccgccgccgccaacgccaacgcc 78 |||| ||||||||||||| ||||||||| Sbjct: 22850703 tccctccgccgccgccaatgccaacgcc 22850730
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 57 cgccgccgccaacgccaacgccaa 80 |||||||||||||||||||||||| Sbjct: 2101552 cgccgccgccaacgccaacgccaa 2101575 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 57 cgccgccgccaacgccaacgcc 78 |||||||||||||||||||||| Sbjct: 23915825 cgccgccgccaacgccaacgcc 23915846
>dbj|AP002913.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0480E02 Length = 141862 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 57 cgccgccgccaacgccaacgccaa 80 |||||||||||||||||||||||| Sbjct: 22664 cgccgccgccaacgccaacgccaa 22687
>dbj|AP005522.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0479H10 Length = 139874 Score = 48.1 bits (24), Expect = 0.031 Identities = 45/52 (86%) Strand = Plus / Minus Query: 284 aatggattgctgattctgatgtgattactcaagtcattgaggagaagtaccc 335 ||||| |||||||||||||||| ||||| |||| || || ||||||||||| Sbjct: 94650 aatgggttgctgattctgatgttattacacaagcgatagaagagaagtaccc 94599
>dbj|AK106013.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-B04, full insert sequence Length = 1123 Score = 48.1 bits (24), Expect = 0.031 Identities = 45/52 (86%) Strand = Plus / Plus Query: 284 aatggattgctgattctgatgtgattactcaagtcattgaggagaagtaccc 335 ||||| |||||||||||||||| ||||| |||| || || ||||||||||| Sbjct: 508 aatgggttgctgattctgatgttattacacaagcgatagaagagaagtaccc 559
>dbj|AK070471.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050F24, full insert sequence Length = 1197 Score = 48.1 bits (24), Expect = 0.031 Identities = 45/52 (86%) Strand = Plus / Minus Query: 284 aatggattgctgattctgatgtgattactcaagtcattgaggagaagtaccc 335 ||||| |||||||||||||||| ||||| |||| || || ||||||||||| Sbjct: 663 aatgggttgctgattctgatgttattacacaagcgatagaagagaagtaccc 612
>dbj|AK065644.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013037C13, full insert sequence Length = 1182 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 57 cgccgccgccaacgccaacgccaa 80 |||||||||||||||||||||||| Sbjct: 44 cgccgccgccaacgccaacgccaa 67
>gb|AC105262.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1489_G03, complete sequence Length = 107870 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 57 cgccgccgccaacgccaacgccaa 80 |||||||||||||||||||||||| Sbjct: 68210 cgccgccgccaacgccaacgccaa 68233
>gb|AC129717.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0079H23, complete sequence Length = 191765 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 56 ccgccgccgccaacgccaacgcc 78 ||||||||||||||||||||||| Sbjct: 189217 ccgccgccgccaacgccaacgcc 189195
>gb|AC093956.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1263_E10, complete sequence Length = 116469 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 56 ccgccgccgccaacgccaacgcc 78 ||||||||||||||||||||||| Sbjct: 26705 ccgccgccgccaacgccaacgcc 26683
>dbj|AK103746.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033138P03, full insert sequence Length = 1223 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 56 ccgccgccgccaacgccaacgcc 78 ||||||||||||||||||||||| Sbjct: 296 ccgccgccgccaacgccaacgcc 274
>ref|XM_466436.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1375 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 49 cttccccccgccgccgccaacgccaacgcc 78 |||||| ||||||||||||||||| ||||| Sbjct: 65 cttcccaccgccgccgccaacgccgacgcc 94
>ref|NM_192703.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 666 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 57 cgccgccgccaacgccaacgcc 78 |||||||||||||||||||||| Sbjct: 357 cgccgccgccaacgccaacgcc 378
>emb|AL590822.36| Human DNA sequence from clone RP11-181G12 on chromosome 1 Contains the 3' end of the PRKCZ gene for protein kinase C zeta, a novel gene, a novel gene (FLJ31031), the SKI gene for v-ski sarcoma viral oncogene homolog (avian) and five CpG islands, complete sequence Length = 179836 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 60 cgccgccaacgccaacgccaac 81 |||||||||||||||||||||| Sbjct: 87305 cgccgccaacgccaacgccaac 87284
>gb|CP000282.1| Saccharophagus degradans 2-40, complete genome Length = 5057531 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 57 cgccgccgccaacgccaacgccaaca 82 ||||| |||||||||||||||||||| Sbjct: 3132380 cgccgacgccaacgccaacgccaaca 3132355 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 ccgccgccgccaacgccaac 75 |||||||||||||||||||| Sbjct: 1107308 ccgccgccgccaacgccaac 1107289
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 49 cttccccccgccgccgccaacgccaacgcc 78 |||||| ||||||||||||||||| ||||| Sbjct: 22636958 cttcccaccgccgccgccaacgccgacgcc 22636987 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 cacgctggaggagaagaagg 181 |||||||||||||||||||| Sbjct: 22241386 cacgctggaggagaagaagg 22241367
>ref|XM_219703.3| PREDICTED: Rattus norvegicus similar to Cezanne 2 protein (LOC309252), mRNA Length = 3047 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 56 ccgccgccgccaacgccaacgccaac 81 ||||||| |||||||||||||||||| Sbjct: 2167 ccgccgcagccaacgccaacgccaac 2192
>dbj|AP003303.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0704D04 Length = 147638 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 57 cgccgccgccaacgccaacgcc 78 |||||||||||||||||||||| Sbjct: 62229 cgccgccgccaacgccaacgcc 62250
>dbj|AP003216.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0090K04 Length = 152556 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 57 cgccgccgccaacgccaacgcc 78 |||||||||||||||||||||| Sbjct: 30347 cgccgccgccaacgccaacgcc 30368
>dbj|AP003614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0481E08 Length = 171965 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 57 cgccgccgccaacgccaacgcc 78 |||||||||||||||||||||| Sbjct: 15991 cgccgccgccaacgccaacgcc 15970
>dbj|AP004687.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0021C04 Length = 162115 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 56 ccgccgccgccaacgccaacgccaac 81 ||||||||||||| |||||||||||| Sbjct: 34276 ccgccgccgccaatgccaacgccaac 34301
>dbj|AP005644.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0056I22 Length = 147728 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 49 cttccccccgccgccgccaacgccaacgcc 78 |||||| ||||||||||||||||| ||||| Sbjct: 84769 cttcccaccgccgccgccaacgccgacgcc 84798
>dbj|AK069595.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023024G02, full insert sequence Length = 1375 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 49 cttccccccgccgccgccaacgccaacgcc 78 |||||| ||||||||||||||||| ||||| Sbjct: 65 cttcccaccgccgccgccaacgccgacgcc 94
>emb|X60995.1|DSANTPE1 D.subobscura antennapedia homeotic gene (Antp), exons 4-7 Length = 2016 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 58 gccgccgccaacgccaacgcca 79 |||||||||||||||||||||| Sbjct: 623 gccgccgccaacgccaacgcca 644
>ref|XM_470389.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1425 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 53 cccccgccgccgccaacgcca 73 ||||||||||||||||||||| Sbjct: 334 cccccgccgccgccaacgcca 354
>ref|XM_472197.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1224 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 55 cccgccgccgccaacgccaacgcca 79 |||| |||||||||||||||||||| Sbjct: 712 cccggcgccgccaacgccaacgcca 736
>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence Length = 4837408 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 468 actggaagagcacctaaaggcccat 492 |||| |||||||||||||||||||| Sbjct: 3943538 actgcaagagcacctaaaggcccat 3943514
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 cccccgccgccgccaacgcca 73 ||||||||||||||||||||| Sbjct: 35202603 cccccgccgccgccaacgcca 35202583
>gb|AC092852.6| Oryza sativa chromosome 3 BAC OSJNBa0032G11 genomic sequence, complete sequence Length = 156606 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 cccccgccgccgccaacgcca 73 ||||||||||||||||||||| Sbjct: 81364 cccccgccgccgccaacgcca 81344
>emb|AL162402.19| Human DNA sequence from clone RP5-1054K23 on chromosome 1p13.3-21.1, complete sequence Length = 80743 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 322 gaggagaagtacccaactcca 342 ||||||||||||||||||||| Sbjct: 18278 gaggagaagtacccaactcca 18298
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 57 cgccgccgccaacgccaacgccaac 81 ||||| ||||||||||||||||||| Sbjct: 131086 cgccgacgccaacgccaacgccaac 131110
>gb|AE012465.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 373 of 460 of the complete genome Length = 12933 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 gccgccaacgccaacgccaac 81 ||||||||||||||||||||| Sbjct: 5298 gccgccaacgccaacgccaac 5278
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 gccgccaacgccaacgccaac 81 ||||||||||||||||||||| Sbjct: 844214 gccgccaacgccaacgccaac 844234 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 cgccaacgccaacgccaaca 82 |||||||||||||||||||| Sbjct: 1672013 cgccaacgccaacgccaaca 1671994
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 55 cccgccgccgccaacgccaacgcca 79 |||| |||||||||||||||||||| Sbjct: 18403788 cccggcgccgccaacgccaacgcca 18403764
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 atccagagggcaaggtgcctgtgtt 266 |||||||||||||||||||| |||| Sbjct: 2187866 atccagagggcaaggtgcctctgtt 2187842
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 ccgccgccaacgccaacgcca 79 ||||||||||||||||||||| Sbjct: 8613349 ccgccgccaacgccaacgcca 8613329
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 cccccgccgccgccaacgcca 73 ||||||||||||||||||||| Sbjct: 35292675 cccccgccgccgccaacgcca 35292655
>dbj|AP005782.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0079G12 Length = 139796 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 ccgccgccaacgccaacgcca 79 ||||||||||||||||||||| Sbjct: 134559 ccgccgccaacgccaacgcca 134539
>dbj|AP005802.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0057D11 Length = 190790 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 ccgccgccaacgccaacgcca 79 ||||||||||||||||||||| Sbjct: 43145 ccgccgccaacgccaacgcca 43125
>gb|AE004999.1| Halobacterium sp. NRC-1 section 30 of 170 of the complete genome Length = 16155 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 102 ggccgccgtcggccaccccgacacgctcggcga 134 ||||||||||||| || ||||| |||||||||| Sbjct: 7634 ggccgccgtcggcgacgccgacgcgctcggcga 7602
>dbj|AK119185.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-G04, full insert sequence Length = 1135 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 242 atccagagggcaaggtgcctgtgtt 266 |||||||||||||||||||| |||| Sbjct: 660 atccagagggcaaggtgcctctgtt 684
>dbj|AK105900.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-F08, full insert sequence Length = 1399 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 ccgccgccaacgccaacgcca 79 ||||||||||||||||||||| Sbjct: 336 ccgccgccaacgccaacgcca 356
>dbj|AK104445.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-B05, full insert sequence Length = 1124 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 242 atccagagggcaaggtgcctgtgtt 266 |||||||||||||||||||| |||| Sbjct: 660 atccagagggcaaggtgcctctgtt 684
>dbj|AK071762.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023109H06, full insert sequence Length = 1136 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 242 atccagagggcaaggtgcctgtgtt 266 |||||||||||||||||||| |||| Sbjct: 661 atccagagggcaaggtgcctctgtt 685
>dbj|AK059168.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-E06, full insert sequence Length = 1425 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 53 cccccgccgccgccaacgcca 73 ||||||||||||||||||||| Sbjct: 334 cccccgccgccgccaacgcca 354
>gb|AY107074.1| Zea mays PCO084029 mRNA sequence Length = 552 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 60 cgccgccaacgccaacgccaa 80 ||||||||||||||||||||| Sbjct: 125 cgccgccaacgccaacgccaa 145
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 57 cgccgccgccaacgccaacgccaac 81 ||||| ||||||||||||||||||| Sbjct: 153845 cgccgacgccaacgccaacgccaac 153869 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 57 cgccgccgccaacgccaacgccaac 81 ||||| ||||||||||||||||||| Sbjct: 153671 cgccgacgccaacgccaacgccaac 153695 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 57 cgccgccgccaacgccaacgccaac 81 ||||| ||||||||||||||||||| Sbjct: 153539 cgccgacgccaacgccaacgccaac 153563
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 atccagagggcaaggtgcctgtgtt 266 |||||||||||||||||||| |||| Sbjct: 2195647 atccagagggcaaggtgcctctgtt 2195623
>emb|AL607003.3|OSJN00130 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0006N15, complete sequence Length = 133413 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 55 cccgccgccgccaacgccaacgcca 79 |||| |||||||||||||||||||| Sbjct: 105711 cccggcgccgccaacgccaacgcca 105687
>emb|BX000499.1|CNS08CDP Oryza sativa chromosome 11, . BAC OSJNBa0039D03 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 125593 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 atccagagggcaaggtgcctgtgtt 266 |||||||||||||||||||| |||| Sbjct: 84560 atccagagggcaaggtgcctctgtt 84536
>ref|NM_000908.2| Homo sapiens natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C) (NPR3), mRNA Length = 2651 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 ccgccgccgccaacgccaacgcca 79 |||||||||||||||||| ||||| Sbjct: 316 ccgccgccgccaacgccaccgcca 293
>gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome Length = 2572079 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 tttaacggtggtgatggcaa 284 |||||||||||||||||||| Sbjct: 2408465 tttaacggtggtgatggcaa 2408484
>ref|XM_475190.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1158 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 53 cccccgccgccgccaacgccaacgccaa 80 |||||||||||||| |||||||||||| Sbjct: 527 cccccgccgccgccgccgccaacgccaa 554
>ref|NM_197547.1| Oryza sativa (japonica cultivar-group) putative DNA-binding protein (OSJNBa0040D23.9), mRNA Length = 939 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 49 cttccccccgccgccgccaacgcc 72 ||||||||||||||||||| |||| Sbjct: 249 cttccccccgccgccgccaccgcc 226
>ref|XM_518006.1| PREDICTED: Pan troglodytes similar to Nedd4 family interacting protein 1; Nedd4 WW domain-binding protein 5 (LOC462156), mRNA Length = 854 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 cgccgccaacgccaacgcca 79 |||||||||||||||||||| Sbjct: 176 cgccgccaacgccaacgcca 157
>ref|XM_526959.1| PREDICTED: Pan troglodytes similar to natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C) (LOC471581), mRNA Length = 2352 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 ccgccgccgccaacgccaacgcca 79 |||||||||||||||||| ||||| Sbjct: 461 ccgccgccgccaacgccaccgcca 438
>gb|BT017577.1| Zea mays clone EL01N0427H02.c mRNA sequence Length = 938 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 ccgccgccgccaacgccaac 75 |||||||||||||||||||| Sbjct: 242 ccgccgccgccaacgccaac 223
>ref|XM_953788.1| Neurospora crassa OR74A hypothetical protein (NCU07388.1) partial mRNA Length = 1695 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 cgccaacgccaacgccaaca 82 |||||||||||||||||||| Sbjct: 1401 cgccaacgccaacgccaaca 1420
>gb|BC004317.1| Homo sapiens Nedd4 family interacting protein 1, mRNA (cDNA clone MGC:10924 IMAGE:3628100), complete cds Length = 1837 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 cgccgccaacgccaacgcca 79 |||||||||||||||||||| Sbjct: 125 cgccgccaacgccaacgcca 106
>ref|XM_327673.1| Neurospora crassa OR74A hypothetical protein (NCU07388.1) partial mRNA Length = 1695 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 cgccaacgccaacgccaaca 82 |||||||||||||||||||| Sbjct: 1401 cgccaacgccaacgccaaca 1420
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 58 gccgccgccaacgccaacgccaac 81 |||| ||||||||||||||||||| Sbjct: 1938028 gccggcgccaacgccaacgccaac 1938005
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 cgccaacgccaacgccaaca 82 |||||||||||||||||||| Sbjct: 4667990 cgccaacgccaacgccaaca 4668009
>gb|DQ491001.1| Chlorella virus MT325 ctg_71 genomic sequence Length = 314335 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 cgccaacgccaacgccaaca 82 |||||||||||||||||||| Sbjct: 161944 cgccaacgccaacgccaaca 161963 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 cgccaacgccaacgccaaca 82 |||||||||||||||||||| Sbjct: 161872 cgccaacgccaacgccaaca 161891
>gb|AY192728.1| Homo sapiens breast cancer-associated protein SGA-1M mRNA, complete cds Length = 1905 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 cgccgccaacgccaacgcca 79 |||||||||||||||||||| Sbjct: 193 cgccgccaacgccaacgcca 174
>emb|AJ007036.1|MGR7036 Mycosphaerella graminicola microsatellite ST2C10 DNA Length = 304 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 ccgccgccgccaacgccaacgcca 79 |||||||||||||||||| ||||| Sbjct: 162 ccgccgccgccaacgccaccgcca 139
>ref|XM_808826.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1 (DGF-1) (Tc00.1047053510607.29) partial mRNA Length = 9781 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 ccgccgccgccaacgccaacgcca 79 ||||||| |||||||||||||||| Sbjct: 172 ccgccgcagccaacgccaacgcca 149
>gb|AC118539.5| Mus musculus strain 129/Sv clone ct7-282g9 map 14, complete sequence Length = 98063 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 cgccaacgccaacgccaaca 82 |||||||||||||||||||| Sbjct: 37873 cgccaacgccaacgccaaca 37892
>ref|XM_504187.1| Yarrowia lipolytica CLIB122, YALI0E20449g predicted mRNA Length = 1464 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 cgccaacgccaacgccaaca 82 |||||||||||||||||||| Sbjct: 885 cgccaacgccaacgccaaca 904
>gb|AC011401.9| Homo sapiens chromosome 5 clone CTB-35K5, complete sequence Length = 199275 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 cgccgccaacgccaacgcca 79 |||||||||||||||||||| Sbjct: 102396 cgccgccaacgccaacgcca 102415
>emb|BX842638.1| Neurospora crassa DNA linkage group I cosmid contig G17B7 Length = 60687 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 cgccaacgccaacgccaaca 82 |||||||||||||||||||| Sbjct: 35987 cgccaacgccaacgccaaca 35968
>emb|BX908776.14| Zebrafish DNA sequence from clone DKEY-88E12 in linkage group 3, complete sequence Length = 249946 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 gccaacgccaacgccaacat 83 |||||||||||||||||||| Sbjct: 244074 gccaacgccaacgccaacat 244055
>gb|AC074196.14| Oryza sativa chromosome 10 BAC OSJNBa0040D23 genomic sequence, complete sequence Length = 134102 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 49 cttccccccgccgccgccaacgcc 72 ||||||||||||||||||| |||| Sbjct: 37825 cttccccccgccgccgccaccgcc 37848
>dbj|AB097037.1| Homo sapiens mRNA for putative MAPK activating protein, complete cds, clone: PM13 Length = 1864 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 cgccgccaacgccaacgcca 79 |||||||||||||||||||| Sbjct: 173 cgccgccaacgccaacgcca 154
>dbj|AB097010.1| Homo sapiens mRNA for putative NFkB activating protein, complete cds, clone: 164 Length = 1864 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 cgccgccaacgccaacgcca 79 |||||||||||||||||||| Sbjct: 173 cgccgccaacgccaacgcca 154
>dbj|AK075524.1| Homo sapiens cDNA PSEC0223 fis, clone HEMBA1005628, highly similar to Nedd4 family interacting protein 1 Length = 1874 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 cgccgccaacgccaacgcca 79 |||||||||||||||||||| Sbjct: 176 cgccgccaacgccaacgcca 157
>dbj|AK075495.1| Homo sapiens cDNA PSEC0192 fis, clone HEMBA1000675 Length = 1557 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 cgccgccaacgccaacgcca 79 |||||||||||||||||||| Sbjct: 157 cgccgccaacgccaacgcca 138
>gb|AE012386.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 294 of 460 of the complete genome Length = 10029 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 cgccaacgccaacgccaaca 82 |||||||||||||||||||| Sbjct: 1333 cgccaacgccaacgccaaca 1352
>dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023 Length = 2661830 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 cgccaacgccaacgccaaca 82 |||||||||||||||||||| Sbjct: 724723 cgccaacgccaacgccaaca 724742
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 ccaccccgacacgctcggcg 133 |||||||||||||||||||| Sbjct: 1081917 ccaccccgacacgctcggcg 1081898
>dbj|AP008934.1| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 DNA, complete genome Length = 2516575 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 gattgctgattctgatgtga 307 |||||||||||||||||||| Sbjct: 2496737 gattgctgattctgatgtga 2496718
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 cccccgccgccgccaacgcc 72 |||||||||||||||||||| Sbjct: 1104021 cccccgccgccgccaacgcc 1104002
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 ccgccgccaacgccaacgcc 78 |||||||||||||||||||| Sbjct: 19633262 ccgccgccaacgccaacgcc 19633281
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 49 cttccccccgccgccgccaacgcc 72 ||||||||||||||||||| |||| Sbjct: 20397677 cttccccccgccgccgccaccgcc 20397700
>gb|AC008766.4|AC008766 Homo sapiens chromosome 5 clone CTD-2004A9, complete sequence Length = 147530 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 ccgccgccgccaacgccaacgcca 79 |||||||||||||||||| ||||| Sbjct: 109855 ccgccgccgccaacgccaccgcca 109832
>dbj|AB101582.2| Homo sapiens NPRC gene for natriuretic peptide receptor C, complete cds Length = 2872 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 ccgccgccgccaacgccaacgcca 79 |||||||||||||||||| ||||| Sbjct: 152 ccgccgccgccaacgccaccgcca 129
>gb|AE004596.1| Pseudomonas aeruginosa PAO1, section 157 of 529 of the complete genome Length = 11958 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 cgccaacgccaacgccaaca 82 |||||||||||||||||||| Sbjct: 9719 cgccaacgccaacgccaaca 9700
>ref|NM_030571.2| Homo sapiens Nedd4 family interacting protein 1 (NDFIP1), mRNA Length = 2533 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 cgccgccaacgccaacgcca 79 |||||||||||||||||||| Sbjct: 237 cgccgccaacgccaacgcca 218
>dbj|AP006161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1267B06 Length = 156989 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 cacgctggaggagaagaagg 181 |||||||||||||||||||| Sbjct: 30 cacgctggaggagaagaagg 11
>dbj|AP003617.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0502H06 Length = 165630 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 51 tccccccgccgccgccaacgccaacgcc 78 |||| ||||||||||||| ||||||||| Sbjct: 25525 tccctccgccgccgccaatgccaacgcc 25552
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 cgaggtctgcgtcaaggccg 106 |||||||||||||||||||| Sbjct: 6118899 cgaggtctgcgtcaaggccg 6118880
>dbj|AP006070.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1342F01 Length = 153287 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 cacgctggaggagaagaagg 181 |||||||||||||||||||| Sbjct: 137230 cacgctggaggagaagaagg 137211
>emb|AL079302.7|CNS00M8S Human chromosome 14 DNA sequence BAC R-1089B7 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 204230 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 gtgctgctcacgctggagga 173 |||||||||||||||||||| Sbjct: 40669 gtgctgctcacgctggagga 40650
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 58 gccgccgccaacgccaacgccaac 81 |||| ||||||||||||||||||| Sbjct: 3468756 gccggcgccaacgccaacgccaac 3468733
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 ccgccgccaacgccaacgcc 78 |||||||||||||||||||| Sbjct: 3535040 ccgccgccaacgccaacgcc 3535059
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 49 cttccccccgccgccgccaacgcc 72 ||||||||||||||||||| |||| Sbjct: 20408949 cttccccccgccgccgccaccgcc 20408972
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 ccgccgccaacgccaacgcc 78 |||||||||||||||||||| Sbjct: 19559476 ccgccgccaacgccaacgcc 19559495
>emb|AL837527.2|CNS08CAQ Oryza sativa chromosome 12, . BAC OSJNBb0078B20 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 133659 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 ccgccgccaacgccaacgcc 78 |||||||||||||||||||| Sbjct: 93731 ccgccgccaacgccaacgcc 93712
>gb|AE009442.1| Xylella fastidiosa Temecula1, complete genome Length = 2519802 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 cgccaacgccaacgccaaca 82 |||||||||||||||||||| Sbjct: 276312 cgccaacgccaacgccaaca 276331 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 ccgccaacgccaacgccaac 81 |||||||||||||||||||| Sbjct: 276305 ccgccaacgccaacgccaac 276324
>gb|AF025998.1|AF025998 Homo sapiens atrial natriuretic peptide clearance receptor (ANPRC) mRNA, complete cds Length = 1623 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 ccgccgccgccaacgccaacgcca 79 |||||||||||||||||| ||||| Sbjct: 98 ccgccgccgccaacgccaccgcca 75
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 cgccaacgccaacgccaaca 82 |||||||||||||||||||| Sbjct: 2424809 cgccaacgccaacgccaaca 2424828
>gb|M59305.1|HUMANPCR Human atrial natriuretic peptide clearance receptor (ANP C-receptor) mRNA, complete cds Length = 2081 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 ccgccgccgccaacgccaacgcca 79 |||||||||||||||||| ||||| Sbjct: 460 ccgccgccgccaacgccaccgcca 437
>gb|AC105258.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1057_G07, complete sequence Length = 71145 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 53 cccccgccgccgccaacgccaacgccaa 80 |||||||||||||| |||||||||||| Sbjct: 20369 cccccgccgccgccgccgccaacgccaa 20342
>emb|X52282.1|HSANPCR Human mRNA for atrial natriuretic peptide clearance receptor (ANP-C receptor) Length = 1752 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 ccgccgccgccaacgccaacgcca 79 |||||||||||||||||| ||||| Sbjct: 152 ccgccgccgccaacgccaccgcca 129 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,860,581 Number of Sequences: 3902068 Number of extensions: 4860581 Number of successful extensions: 102594 Number of sequences better than 10.0: 136 Number of HSP's better than 10.0 without gapping: 141 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 100101 Number of HSP's gapped (non-prelim): 2482 length of query: 555 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 532 effective length of database: 17,143,297,704 effective search space: 9120234378528 effective search space used: 9120234378528 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
