ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd18m06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SEC22_ARATH (Q94AU2) 25.3 kDa vesicle transport protein (AtSEC22) 236 2e-62
2SC22B_PONPY (Q5RAI9) Vesicle trafficking protein SEC22b (SEC22 v... 143 3e-34
3SC22B_MOUSE (O08547) Vesicle trafficking protein SEC22b (SEC22 v... 143 3e-34
4SC22B_HUMAN (O75396) Vesicle trafficking protein SEC22b (SEC22 v... 143 3e-34
5SEC22_YARLI (Q6C880) Protein transport protein SEC22 116 3e-26
6SEC22_SCHPO (Q9Y7L0) Protein transport protein sec22 115 8e-26
7SEC22_ASHGO (Q74ZD2) Protein transport protein SEC22 102 9e-22
8SEC22_KLULA (Q6CJA0) Protein transport protein SEC22 96 5e-20
9SEC22_YEAST (P22214) Protein transport protein SEC22 (Protein SLY2) 89 6e-18
10SEC22_CANGA (Q6FWT0) Protein transport protein SEC22 86 9e-17
11SYBL1_HUMAN (P51809) Synaptobrevin-like protein 1 (Tetanus insen... 54 2e-07
12SYBL1_PONPY (Q5RF94) Synaptobrevin-like protein 1 54 3e-07
13YKT6_SCHPO (O60073) Synaptobrevin homolog ykt6 40 0.004
14VA712_ARATH (Q9SIQ9) Vesicle-associated membrane protein 712 (At... 33 0.66
15VA713_ARATH (Q9LFP1) Vesicle-associated membrane protein 713 (At... 33 0.66
16VA711_ARATH (O49377) Vesicle-associated membrane protein 711 (At... 32 0.86
17VA714_ARATH (Q9FMR5) Vesicle-associated membrane protein 714 (At... 30 4.3
18SPAG1_RAT (Q5U2X2) Sperm-associated antigen 1 (Infertility-relat... 30 4.3

>SEC22_ARATH (Q94AU2) 25.3 kDa vesicle transport protein (AtSEC22)|
          Length = 218

 Score =  236 bits (603), Expect = 2e-62
 Identities = 114/131 (87%), Positives = 121/131 (92%)
 Frame = +1

Query: 142 MVKLTMIARVTDGLPLAEGLDDGRDQKDSDFYKQQAKLLFKNLSKGQHEASRMSIETGSY 321
           MVK+T+IARVTDGLPLAEGLDDGRD  DSD YKQQ K LFKNLS+GQ++ASRMS+ETG Y
Sbjct: 1   MVKMTLIARVTDGLPLAEGLDDGRDLPDSDMYKQQVKALFKNLSRGQNDASRMSVETGPY 60

Query: 322 FFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGSQIETAARPYAFIKFDTYI 501
            FHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNG  IETAARPYAFIKFDT+I
Sbjct: 61  VFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGPNIETAARPYAFIKFDTFI 120

Query: 502 QKTKKLYLDTR 534
           QKTKKLY DTR
Sbjct: 121 QKTKKLYQDTR 131



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>SC22B_PONPY (Q5RAI9) Vesicle trafficking protein SEC22b (SEC22 vesicle|
           trafficking protein-like 1)
          Length = 214

 Score =  143 bits (361), Expect = 3e-34
 Identities = 70/131 (53%), Positives = 97/131 (74%), Gaps = 1/131 (0%)
 Frame = +1

Query: 145 VKLTMIARVTDGLPLAEGL-DDGRDQKDSDFYKQQAKLLFKNLSKGQHEASRMSIETGSY 321
           V LTMIARV DGLPLA  + +D +  +D   Y+ QAK LF+ L+  +   +R ++E G+ 
Sbjct: 1   VLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLN--EQSPTRCTLEAGAM 58

Query: 322 FFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGSQIETAARPYAFIKFDTYI 501
            FHYIIE  VCYL +C+ ++PKKLAF YLEDL +EF+  +G ++ T +RPY+FI+FDT+I
Sbjct: 59  TFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFDEQHGKKVPTVSRPYSFIEFDTFI 118

Query: 502 QKTKKLYLDTR 534
           QKTKKLY+D+R
Sbjct: 119 QKTKKLYIDSR 129



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>SC22B_MOUSE (O08547) Vesicle trafficking protein SEC22b (SEC22 vesicle|
           trafficking protein-like 1)
          Length = 214

 Score =  143 bits (361), Expect = 3e-34
 Identities = 70/131 (53%), Positives = 97/131 (74%), Gaps = 1/131 (0%)
 Frame = +1

Query: 145 VKLTMIARVTDGLPLAEGL-DDGRDQKDSDFYKQQAKLLFKNLSKGQHEASRMSIETGSY 321
           V LTMIARV DGLPLA  + +D +  +D   Y+ QAK LF+ L+  +   +R ++E G+ 
Sbjct: 1   VLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLN--EQSPTRCTLEAGAM 58

Query: 322 FFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGSQIETAARPYAFIKFDTYI 501
            FHYIIE  VCYL +C+ ++PKKLAF YLEDL +EF+  +G ++ T +RPY+FI+FDT+I
Sbjct: 59  TFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFDEQHGKKVPTVSRPYSFIEFDTFI 118

Query: 502 QKTKKLYLDTR 534
           QKTKKLY+D+R
Sbjct: 119 QKTKKLYIDSR 129



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>SC22B_HUMAN (O75396) Vesicle trafficking protein SEC22b (SEC22 vesicle|
           trafficking protein-like 1)
          Length = 214

 Score =  143 bits (361), Expect = 3e-34
 Identities = 70/131 (53%), Positives = 97/131 (74%), Gaps = 1/131 (0%)
 Frame = +1

Query: 145 VKLTMIARVTDGLPLAEGL-DDGRDQKDSDFYKQQAKLLFKNLSKGQHEASRMSIETGSY 321
           V LTMIARV DGLPLA  + +D +  +D   Y+ QAK LF+ L+  +   +R ++E G+ 
Sbjct: 1   VLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLN--EQSPTRCTLEAGAM 58

Query: 322 FFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGSQIETAARPYAFIKFDTYI 501
            FHYIIE  VCYL +C+ ++PKKLAF YLEDL +EF+  +G ++ T +RPY+FI+FDT+I
Sbjct: 59  TFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFDEQHGKKVPTVSRPYSFIEFDTFI 118

Query: 502 QKTKKLYLDTR 534
           QKTKKLY+D+R
Sbjct: 119 QKTKKLYIDSR 129



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>SEC22_YARLI (Q6C880) Protein transport protein SEC22|
          Length = 213

 Score =  116 bits (291), Expect = 3e-26
 Identities = 57/132 (43%), Positives = 90/132 (68%), Gaps = 1/132 (0%)
 Frame = +1

Query: 142 MVKLTMIARVTDGLPLAEGLDDGRDQKDSDFYKQQAKLLFKNLSKGQHEASRMSIETGSY 321
           MV  T+I R +DGLPL+  +DDG++       K+Q KL+ + LS   + A R SIE+G+Y
Sbjct: 1   MVLSTLIMRASDGLPLSASVDDGQENLSEQ--KKQCKLVTQKLSA--NSADRASIESGNY 56

Query: 322 FFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGSQ-IETAARPYAFIKFDTY 498
             HY+++  + Y  + + SYP+KLAF YL++L  EF++ +G + ++   RPY F++FDT+
Sbjct: 57  VIHYLMKDGIVYYCISESSYPRKLAFSYLDELDREFQKSHGQEALKEGVRPYKFVEFDTF 116

Query: 499 IQKTKKLYLDTR 534
           +QKTK++Y DTR
Sbjct: 117 MQKTKRVYQDTR 128



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>SEC22_SCHPO (Q9Y7L0) Protein transport protein sec22|
          Length = 209

 Score =  115 bits (288), Expect = 8e-26
 Identities = 54/115 (46%), Positives = 82/115 (71%), Gaps = 1/115 (0%)
 Frame = +1

Query: 181 LPLAEGLDDGRDQKDSDFYKQQAKLLFKNLSKGQHEASRMSIETGSYFFHYIIEGRVCYL 360
           LPLA  +DD   +++ + +K+QAKL+ K LS    +  R SIE+G Y FHY+I+  +CYL
Sbjct: 7   LPLAASVDDESTERNLESHKKQAKLILKRLSPTSEK--RASIESGDYTFHYLIDNGICYL 64

Query: 361 TMCDRSYPKKLAFQYLEDLKNEFERVNGSQ-IETAARPYAFIKFDTYIQKTKKLY 522
            +C++SYP+KLAF YLE+L  EF    G + ++   RPYAF++FDT++QK+K++Y
Sbjct: 65  CICEQSYPRKLAFSYLEELAGEFWNSFGEEALQPGLRPYAFVQFDTFMQKSKRVY 119



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>SEC22_ASHGO (Q74ZD2) Protein transport protein SEC22|
          Length = 214

 Score =  102 bits (253), Expect = 9e-22
 Identities = 52/132 (39%), Positives = 84/132 (63%), Gaps = 1/132 (0%)
 Frame = +1

Query: 142 MVKLTMIARVTDGLPLAEGLDDGRDQKDSDFYKQQAKLLFKNLSKGQHEASRMSIETGSY 321
           M+K T+I R  DGLPL   +DD  D   +D  K++ K+L    +     A+  ++E+G+Y
Sbjct: 1   MIKSTLIFR-DDGLPLCSSVDDDTDPSLAD-QKKKVKVLISRFTP--QSANEATLESGAY 56

Query: 322 FFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGSQ-IETAARPYAFIKFDTY 498
             HY+ +  V Y+ + +R YP+ LAF YL ++++EFE   G++ ++ + RPYAF+ FD +
Sbjct: 57  EMHYVRQQSVVYIVIVERGYPRNLAFAYLANVRHEFEHSYGNEYVKPSVRPYAFVSFDNF 116

Query: 499 IQKTKKLYLDTR 534
           +QKTKK+Y D R
Sbjct: 117 LQKTKKIYNDKR 128



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>SEC22_KLULA (Q6CJA0) Protein transport protein SEC22|
          Length = 214

 Score = 96.3 bits (238), Expect = 5e-20
 Identities = 51/132 (38%), Positives = 79/132 (59%), Gaps = 1/132 (0%)
 Frame = +1

Query: 142 MVKLTMIARVTDGLPLAEGLDDGRDQKDSDFYKQQAKLLFKNLSKGQHEASRMSIETGSY 321
           M++ T+I R  DGLPL   +DD  D    +  K++ K+L    +     A+  ++E+G +
Sbjct: 1   MIRSTLIFR-EDGLPLCASVDDDTDPSLQE-QKKKVKILISRFTPTS--ANEATVESGDF 56

Query: 322 FFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGSQI-ETAARPYAFIKFDTY 498
             HYI    V Y+ + +R+YP+ LAF YL D++ EFE   G Q+ ++  RPY F+ FD +
Sbjct: 57  EIHYIRLNTVVYIVVAERNYPRNLAFSYLADIQQEFEHSYGGQLSKSNVRPYEFVSFDNF 116

Query: 499 IQKTKKLYLDTR 534
           +QKTKK+Y D R
Sbjct: 117 LQKTKKVYNDKR 128



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>SEC22_YEAST (P22214) Protein transport protein SEC22 (Protein SLY2)|
          Length = 214

 Score = 89.4 bits (220), Expect = 6e-18
 Identities = 48/132 (36%), Positives = 75/132 (56%), Gaps = 1/132 (0%)
 Frame = +1

Query: 142 MVKLTMIARVTDGLPLAEGLDDGRDQKDSDFYKQQAKLLFKNLSKGQHEASRMSIETGSY 321
           M+K T+I R  DGLPL   +D+  D    +  KQ+ K++   L+     A+  ++E+GS+
Sbjct: 1   MIKSTLIYR-EDGLPLCTSVDNENDPSLFE-QKQKVKIVVSRLTP--QSATEATLESGSF 56

Query: 322 FFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGSQI-ETAARPYAFIKFDTY 498
             HY+ +  V Y  +C+  YP+ LAF YL D+  EFE    ++  +   RPY F+ FD +
Sbjct: 57  EIHYLKKSMVYYFVICESGYPRNLAFSYLNDIAQEFEHSFANEYPKPTVRPYQFVNFDNF 116

Query: 499 IQKTKKLYLDTR 534
           +Q TKK Y D +
Sbjct: 117 LQMTKKSYSDKK 128



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>SEC22_CANGA (Q6FWT0) Protein transport protein SEC22|
          Length = 215

 Score = 85.5 bits (210), Expect = 9e-17
 Identities = 45/132 (34%), Positives = 74/132 (56%), Gaps = 1/132 (0%)
 Frame = +1

Query: 142 MVKLTMIARVTDGLPLAEGLDDGRDQKDSDFYKQQAKLLFKNLSKGQHEASRMSIETGSY 321
           M+K T++ R  DGLPL   +DD       +  K++ K++   ++     A+  ++E+   
Sbjct: 1   MIKSTVVYR-DDGLPLCSSVDDDISDLSLNEQKKRIKMVVSRMTP--QSANEATLESKDS 57

Query: 322 FFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGSQI-ETAARPYAFIKFDTY 498
             HYI +  V Y  +C+  YP+ LAF YL D+  EF+    +++ +   RPYAF  FDT+
Sbjct: 58  EIHYIRQQGVIYFVICEAGYPRNLAFSYLNDVAVEFQHSYSNELSKPTIRPYAFASFDTF 117

Query: 499 IQKTKKLYLDTR 534
           +Q+TKK Y D +
Sbjct: 118 LQRTKKAYSDKK 129



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>SYBL1_HUMAN (P51809) Synaptobrevin-like protein 1 (Tetanus insensitive VAMP)|
           (Ti-VAMP) (Ti-VAMP/VAMP7)
          Length = 219

 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 25/70 (35%), Positives = 42/70 (60%)
 Frame = +1

Query: 268 LSKGQHEASRMSIETGSYFFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGS 447
           L+K   E ++++   G+Y FHYI + R+ YL + D  + +  AF +L ++K  F+   GS
Sbjct: 32  LAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTYGS 91

Query: 448 QIETAARPYA 477
           + +TA  PYA
Sbjct: 92  RAQTAL-PYA 100



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>SYBL1_PONPY (Q5RF94) Synaptobrevin-like protein 1|
          Length = 219

 Score = 53.9 bits (128), Expect = 3e-07
 Identities = 25/70 (35%), Positives = 42/70 (60%)
 Frame = +1

Query: 268 LSKGQHEASRMSIETGSYFFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGS 447
           L+K   E ++++   G+Y FHYI + R+ YL + D  + +  AF +L ++K  F+   GS
Sbjct: 32  LAKIPSENNKLTYPHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTYGS 91

Query: 448 QIETAARPYA 477
           + +TA  PYA
Sbjct: 92  RAQTAL-PYA 100



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>YKT6_SCHPO (O60073) Synaptobrevin homolog ykt6|
          Length = 197

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
 Frame = +1

Query: 262 KNLSKGQHEASRMSIETGSYFFH-YIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERV 438
           K +++  +   R  +E  +Y FH Y     +C +   D+ YP ++A+  L  + +EF   
Sbjct: 45  KTVAERTNPGQRQDVEQSNYVFHVYNRSDGLCGVIASDKEYPLRVAYTLLNKILDEFLTK 104

Query: 439 N-GSQIETAARPYAFIKFDTYIQK 507
           N  ++ E+ A   +F + DTY+ K
Sbjct: 105 NPRTKWESGAVTLSFPELDTYLSK 128



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>VA712_ARATH (Q9SIQ9) Vesicle-associated membrane protein 712 (AtVAMP712)|
          Length = 219

 Score = 32.7 bits (73), Expect = 0.66
 Identities = 17/57 (29%), Positives = 25/57 (43%)
 Frame = +1

Query: 292 SRMSIETGSYFFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGSQIETA 462
           S +S     Y FH      +  L M D    +++ F +LED+   F R  G  I +A
Sbjct: 42  SHVSYSQDRYVFHVKRTDGLTVLCMADEDAGRRIPFSFLEDIHQRFVRTYGRAIHSA 98



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>VA713_ARATH (Q9LFP1) Vesicle-associated membrane protein 713 (AtVAMP713)|
          Length = 221

 Score = 32.7 bits (73), Expect = 0.66
 Identities = 17/62 (27%), Positives = 26/62 (41%)
 Frame = +1

Query: 277 GQHEASRMSIETGSYFFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGSQIE 456
           G    S MS     Y FH      +  L M D +  + + F +L+D+   F +  G  I 
Sbjct: 38  GNDSDSHMSYSQDRYIFHVKRTDGLTVLCMADETAGRNIPFAFLDDIHQRFVKTYGRAIH 97

Query: 457 TA 462
           +A
Sbjct: 98  SA 99



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>VA711_ARATH (O49377) Vesicle-associated membrane protein 711 (AtVAMP711)|
           (v-SNARE synaptobrevin 7C) (AtVAMP7C)
          Length = 219

 Score = 32.3 bits (72), Expect = 0.86
 Identities = 16/57 (28%), Positives = 26/57 (45%)
 Frame = +1

Query: 292 SRMSIETGSYFFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGSQIETA 462
           S +S     Y FH      +  L M + +  +++ F +LED+   F R  G  + TA
Sbjct: 42  SNVSYSQDRYVFHVKRTDGLTVLCMAEETAGRRIPFAFLEDIHQRFVRTYGRAVHTA 98



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>VA714_ARATH (Q9FMR5) Vesicle-associated membrane protein 714 (AtVAMP714)|
          Length = 221

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 13/56 (23%), Positives = 26/56 (46%)
 Frame = +1

Query: 295 RMSIETGSYFFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGSQIETA 462
           R+      Y FH +    + +L M + ++ +++ F YLE++   F +  G     A
Sbjct: 44  RLCFSQDRYIFHILRSDGLTFLCMANDTFGRRVPFSYLEEIHMRFMKNYGKVAHNA 99



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>SPAG1_RAT (Q5U2X2) Sperm-associated antigen 1 (Infertility-related sperm|
           protein Spag-1) (HSD-3.8)
          Length = 893

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = -2

Query: 103 LMANRDGGRRARRLETPRPSSGKQIAGGREESG 5
           LM    GGRR+RR  TP P + +Q   G+ E+G
Sbjct: 380 LMVRSQGGRRSRRARTPMPGAEQQ--EGQPETG 410


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,929,609
Number of Sequences: 219361
Number of extensions: 1313692
Number of successful extensions: 3433
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3416
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4200495993
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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