| Clone Name | basd18m06 |
|---|---|
| Clone Library Name | barley_pub |
>SEC22_ARATH (Q94AU2) 25.3 kDa vesicle transport protein (AtSEC22)| Length = 218 Score = 236 bits (603), Expect = 2e-62 Identities = 114/131 (87%), Positives = 121/131 (92%) Frame = +1 Query: 142 MVKLTMIARVTDGLPLAEGLDDGRDQKDSDFYKQQAKLLFKNLSKGQHEASRMSIETGSY 321 MVK+T+IARVTDGLPLAEGLDDGRD DSD YKQQ K LFKNLS+GQ++ASRMS+ETG Y Sbjct: 1 MVKMTLIARVTDGLPLAEGLDDGRDLPDSDMYKQQVKALFKNLSRGQNDASRMSVETGPY 60 Query: 322 FFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGSQIETAARPYAFIKFDTYI 501 FHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNG IETAARPYAFIKFDT+I Sbjct: 61 VFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGPNIETAARPYAFIKFDTFI 120 Query: 502 QKTKKLYLDTR 534 QKTKKLY DTR Sbjct: 121 QKTKKLYQDTR 131
>SC22B_PONPY (Q5RAI9) Vesicle trafficking protein SEC22b (SEC22 vesicle| trafficking protein-like 1) Length = 214 Score = 143 bits (361), Expect = 3e-34 Identities = 70/131 (53%), Positives = 97/131 (74%), Gaps = 1/131 (0%) Frame = +1 Query: 145 VKLTMIARVTDGLPLAEGL-DDGRDQKDSDFYKQQAKLLFKNLSKGQHEASRMSIETGSY 321 V LTMIARV DGLPLA + +D + +D Y+ QAK LF+ L+ + +R ++E G+ Sbjct: 1 VLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLN--EQSPTRCTLEAGAM 58 Query: 322 FFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGSQIETAARPYAFIKFDTYI 501 FHYIIE VCYL +C+ ++PKKLAF YLEDL +EF+ +G ++ T +RPY+FI+FDT+I Sbjct: 59 TFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFDEQHGKKVPTVSRPYSFIEFDTFI 118 Query: 502 QKTKKLYLDTR 534 QKTKKLY+D+R Sbjct: 119 QKTKKLYIDSR 129
>SC22B_MOUSE (O08547) Vesicle trafficking protein SEC22b (SEC22 vesicle| trafficking protein-like 1) Length = 214 Score = 143 bits (361), Expect = 3e-34 Identities = 70/131 (53%), Positives = 97/131 (74%), Gaps = 1/131 (0%) Frame = +1 Query: 145 VKLTMIARVTDGLPLAEGL-DDGRDQKDSDFYKQQAKLLFKNLSKGQHEASRMSIETGSY 321 V LTMIARV DGLPLA + +D + +D Y+ QAK LF+ L+ + +R ++E G+ Sbjct: 1 VLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLN--EQSPTRCTLEAGAM 58 Query: 322 FFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGSQIETAARPYAFIKFDTYI 501 FHYIIE VCYL +C+ ++PKKLAF YLEDL +EF+ +G ++ T +RPY+FI+FDT+I Sbjct: 59 TFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFDEQHGKKVPTVSRPYSFIEFDTFI 118 Query: 502 QKTKKLYLDTR 534 QKTKKLY+D+R Sbjct: 119 QKTKKLYIDSR 129
>SC22B_HUMAN (O75396) Vesicle trafficking protein SEC22b (SEC22 vesicle| trafficking protein-like 1) Length = 214 Score = 143 bits (361), Expect = 3e-34 Identities = 70/131 (53%), Positives = 97/131 (74%), Gaps = 1/131 (0%) Frame = +1 Query: 145 VKLTMIARVTDGLPLAEGL-DDGRDQKDSDFYKQQAKLLFKNLSKGQHEASRMSIETGSY 321 V LTMIARV DGLPLA + +D + +D Y+ QAK LF+ L+ + +R ++E G+ Sbjct: 1 VLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLN--EQSPTRCTLEAGAM 58 Query: 322 FFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGSQIETAARPYAFIKFDTYI 501 FHYIIE VCYL +C+ ++PKKLAF YLEDL +EF+ +G ++ T +RPY+FI+FDT+I Sbjct: 59 TFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFDEQHGKKVPTVSRPYSFIEFDTFI 118 Query: 502 QKTKKLYLDTR 534 QKTKKLY+D+R Sbjct: 119 QKTKKLYIDSR 129
>SEC22_YARLI (Q6C880) Protein transport protein SEC22| Length = 213 Score = 116 bits (291), Expect = 3e-26 Identities = 57/132 (43%), Positives = 90/132 (68%), Gaps = 1/132 (0%) Frame = +1 Query: 142 MVKLTMIARVTDGLPLAEGLDDGRDQKDSDFYKQQAKLLFKNLSKGQHEASRMSIETGSY 321 MV T+I R +DGLPL+ +DDG++ K+Q KL+ + LS + A R SIE+G+Y Sbjct: 1 MVLSTLIMRASDGLPLSASVDDGQENLSEQ--KKQCKLVTQKLSA--NSADRASIESGNY 56 Query: 322 FFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGSQ-IETAARPYAFIKFDTY 498 HY+++ + Y + + SYP+KLAF YL++L EF++ +G + ++ RPY F++FDT+ Sbjct: 57 VIHYLMKDGIVYYCISESSYPRKLAFSYLDELDREFQKSHGQEALKEGVRPYKFVEFDTF 116 Query: 499 IQKTKKLYLDTR 534 +QKTK++Y DTR Sbjct: 117 MQKTKRVYQDTR 128
>SEC22_SCHPO (Q9Y7L0) Protein transport protein sec22| Length = 209 Score = 115 bits (288), Expect = 8e-26 Identities = 54/115 (46%), Positives = 82/115 (71%), Gaps = 1/115 (0%) Frame = +1 Query: 181 LPLAEGLDDGRDQKDSDFYKQQAKLLFKNLSKGQHEASRMSIETGSYFFHYIIEGRVCYL 360 LPLA +DD +++ + +K+QAKL+ K LS + R SIE+G Y FHY+I+ +CYL Sbjct: 7 LPLAASVDDESTERNLESHKKQAKLILKRLSPTSEK--RASIESGDYTFHYLIDNGICYL 64 Query: 361 TMCDRSYPKKLAFQYLEDLKNEFERVNGSQ-IETAARPYAFIKFDTYIQKTKKLY 522 +C++SYP+KLAF YLE+L EF G + ++ RPYAF++FDT++QK+K++Y Sbjct: 65 CICEQSYPRKLAFSYLEELAGEFWNSFGEEALQPGLRPYAFVQFDTFMQKSKRVY 119
>SEC22_ASHGO (Q74ZD2) Protein transport protein SEC22| Length = 214 Score = 102 bits (253), Expect = 9e-22 Identities = 52/132 (39%), Positives = 84/132 (63%), Gaps = 1/132 (0%) Frame = +1 Query: 142 MVKLTMIARVTDGLPLAEGLDDGRDQKDSDFYKQQAKLLFKNLSKGQHEASRMSIETGSY 321 M+K T+I R DGLPL +DD D +D K++ K+L + A+ ++E+G+Y Sbjct: 1 MIKSTLIFR-DDGLPLCSSVDDDTDPSLAD-QKKKVKVLISRFTP--QSANEATLESGAY 56 Query: 322 FFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGSQ-IETAARPYAFIKFDTY 498 HY+ + V Y+ + +R YP+ LAF YL ++++EFE G++ ++ + RPYAF+ FD + Sbjct: 57 EMHYVRQQSVVYIVIVERGYPRNLAFAYLANVRHEFEHSYGNEYVKPSVRPYAFVSFDNF 116 Query: 499 IQKTKKLYLDTR 534 +QKTKK+Y D R Sbjct: 117 LQKTKKIYNDKR 128
>SEC22_KLULA (Q6CJA0) Protein transport protein SEC22| Length = 214 Score = 96.3 bits (238), Expect = 5e-20 Identities = 51/132 (38%), Positives = 79/132 (59%), Gaps = 1/132 (0%) Frame = +1 Query: 142 MVKLTMIARVTDGLPLAEGLDDGRDQKDSDFYKQQAKLLFKNLSKGQHEASRMSIETGSY 321 M++ T+I R DGLPL +DD D + K++ K+L + A+ ++E+G + Sbjct: 1 MIRSTLIFR-EDGLPLCASVDDDTDPSLQE-QKKKVKILISRFTPTS--ANEATVESGDF 56 Query: 322 FFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGSQI-ETAARPYAFIKFDTY 498 HYI V Y+ + +R+YP+ LAF YL D++ EFE G Q+ ++ RPY F+ FD + Sbjct: 57 EIHYIRLNTVVYIVVAERNYPRNLAFSYLADIQQEFEHSYGGQLSKSNVRPYEFVSFDNF 116 Query: 499 IQKTKKLYLDTR 534 +QKTKK+Y D R Sbjct: 117 LQKTKKVYNDKR 128
>SEC22_YEAST (P22214) Protein transport protein SEC22 (Protein SLY2)| Length = 214 Score = 89.4 bits (220), Expect = 6e-18 Identities = 48/132 (36%), Positives = 75/132 (56%), Gaps = 1/132 (0%) Frame = +1 Query: 142 MVKLTMIARVTDGLPLAEGLDDGRDQKDSDFYKQQAKLLFKNLSKGQHEASRMSIETGSY 321 M+K T+I R DGLPL +D+ D + KQ+ K++ L+ A+ ++E+GS+ Sbjct: 1 MIKSTLIYR-EDGLPLCTSVDNENDPSLFE-QKQKVKIVVSRLTP--QSATEATLESGSF 56 Query: 322 FFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGSQI-ETAARPYAFIKFDTY 498 HY+ + V Y +C+ YP+ LAF YL D+ EFE ++ + RPY F+ FD + Sbjct: 57 EIHYLKKSMVYYFVICESGYPRNLAFSYLNDIAQEFEHSFANEYPKPTVRPYQFVNFDNF 116 Query: 499 IQKTKKLYLDTR 534 +Q TKK Y D + Sbjct: 117 LQMTKKSYSDKK 128
>SEC22_CANGA (Q6FWT0) Protein transport protein SEC22| Length = 215 Score = 85.5 bits (210), Expect = 9e-17 Identities = 45/132 (34%), Positives = 74/132 (56%), Gaps = 1/132 (0%) Frame = +1 Query: 142 MVKLTMIARVTDGLPLAEGLDDGRDQKDSDFYKQQAKLLFKNLSKGQHEASRMSIETGSY 321 M+K T++ R DGLPL +DD + K++ K++ ++ A+ ++E+ Sbjct: 1 MIKSTVVYR-DDGLPLCSSVDDDISDLSLNEQKKRIKMVVSRMTP--QSANEATLESKDS 57 Query: 322 FFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGSQI-ETAARPYAFIKFDTY 498 HYI + V Y +C+ YP+ LAF YL D+ EF+ +++ + RPYAF FDT+ Sbjct: 58 EIHYIRQQGVIYFVICEAGYPRNLAFSYLNDVAVEFQHSYSNELSKPTIRPYAFASFDTF 117 Query: 499 IQKTKKLYLDTR 534 +Q+TKK Y D + Sbjct: 118 LQRTKKAYSDKK 129
>SYBL1_HUMAN (P51809) Synaptobrevin-like protein 1 (Tetanus insensitive VAMP)| (Ti-VAMP) (Ti-VAMP/VAMP7) Length = 219 Score = 54.3 bits (129), Expect = 2e-07 Identities = 25/70 (35%), Positives = 42/70 (60%) Frame = +1 Query: 268 LSKGQHEASRMSIETGSYFFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGS 447 L+K E ++++ G+Y FHYI + R+ YL + D + + AF +L ++K F+ GS Sbjct: 32 LAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTYGS 91 Query: 448 QIETAARPYA 477 + +TA PYA Sbjct: 92 RAQTAL-PYA 100
>SYBL1_PONPY (Q5RF94) Synaptobrevin-like protein 1| Length = 219 Score = 53.9 bits (128), Expect = 3e-07 Identities = 25/70 (35%), Positives = 42/70 (60%) Frame = +1 Query: 268 LSKGQHEASRMSIETGSYFFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGS 447 L+K E ++++ G+Y FHYI + R+ YL + D + + AF +L ++K F+ GS Sbjct: 32 LAKIPSENNKLTYPHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTYGS 91 Query: 448 QIETAARPYA 477 + +TA PYA Sbjct: 92 RAQTAL-PYA 100
>YKT6_SCHPO (O60073) Synaptobrevin homolog ykt6| Length = 197 Score = 40.0 bits (92), Expect = 0.004 Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 2/84 (2%) Frame = +1 Query: 262 KNLSKGQHEASRMSIETGSYFFH-YIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERV 438 K +++ + R +E +Y FH Y +C + D+ YP ++A+ L + +EF Sbjct: 45 KTVAERTNPGQRQDVEQSNYVFHVYNRSDGLCGVIASDKEYPLRVAYTLLNKILDEFLTK 104 Query: 439 N-GSQIETAARPYAFIKFDTYIQK 507 N ++ E+ A +F + DTY+ K Sbjct: 105 NPRTKWESGAVTLSFPELDTYLSK 128
>VA712_ARATH (Q9SIQ9) Vesicle-associated membrane protein 712 (AtVAMP712)| Length = 219 Score = 32.7 bits (73), Expect = 0.66 Identities = 17/57 (29%), Positives = 25/57 (43%) Frame = +1 Query: 292 SRMSIETGSYFFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGSQIETA 462 S +S Y FH + L M D +++ F +LED+ F R G I +A Sbjct: 42 SHVSYSQDRYVFHVKRTDGLTVLCMADEDAGRRIPFSFLEDIHQRFVRTYGRAIHSA 98
>VA713_ARATH (Q9LFP1) Vesicle-associated membrane protein 713 (AtVAMP713)| Length = 221 Score = 32.7 bits (73), Expect = 0.66 Identities = 17/62 (27%), Positives = 26/62 (41%) Frame = +1 Query: 277 GQHEASRMSIETGSYFFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGSQIE 456 G S MS Y FH + L M D + + + F +L+D+ F + G I Sbjct: 38 GNDSDSHMSYSQDRYIFHVKRTDGLTVLCMADETAGRNIPFAFLDDIHQRFVKTYGRAIH 97 Query: 457 TA 462 +A Sbjct: 98 SA 99
>VA711_ARATH (O49377) Vesicle-associated membrane protein 711 (AtVAMP711)| (v-SNARE synaptobrevin 7C) (AtVAMP7C) Length = 219 Score = 32.3 bits (72), Expect = 0.86 Identities = 16/57 (28%), Positives = 26/57 (45%) Frame = +1 Query: 292 SRMSIETGSYFFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGSQIETA 462 S +S Y FH + L M + + +++ F +LED+ F R G + TA Sbjct: 42 SNVSYSQDRYVFHVKRTDGLTVLCMAEETAGRRIPFAFLEDIHQRFVRTYGRAVHTA 98
>VA714_ARATH (Q9FMR5) Vesicle-associated membrane protein 714 (AtVAMP714)| Length = 221 Score = 30.0 bits (66), Expect = 4.3 Identities = 13/56 (23%), Positives = 26/56 (46%) Frame = +1 Query: 295 RMSIETGSYFFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGSQIETA 462 R+ Y FH + + +L M + ++ +++ F YLE++ F + G A Sbjct: 44 RLCFSQDRYIFHILRSDGLTFLCMANDTFGRRVPFSYLEEIHMRFMKNYGKVAHNA 99
>SPAG1_RAT (Q5U2X2) Sperm-associated antigen 1 (Infertility-related sperm| protein Spag-1) (HSD-3.8) Length = 893 Score = 30.0 bits (66), Expect = 4.3 Identities = 15/33 (45%), Positives = 20/33 (60%) Frame = -2 Query: 103 LMANRDGGRRARRLETPRPSSGKQIAGGREESG 5 LM GGRR+RR TP P + +Q G+ E+G Sbjct: 380 LMVRSQGGRRSRRARTPMPGAEQQ--EGQPETG 410 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 67,929,609 Number of Sequences: 219361 Number of extensions: 1313692 Number of successful extensions: 3433 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 3353 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3416 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4200495993 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)