| Clone Name | basd18l24 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | TUD_DROME (P25823) Maternal protein tudor | 31 | 2.7 | 2 | T2R38_MOUSE (Q7TQA6) Putative taste receptor type 2 member 38 (T... | 30 | 4.6 | 3 | NHR10_CAEEL (P41999) Nuclear hormone receptor family member nhr-10 | 30 | 6.0 | 4 | STX11_MOUSE (Q9D3G5) Syntaxin-11 | 30 | 6.0 | 5 | C1TC_YEAST (P07245) C-1-tetrahydrofolate synthase, cytoplasmic (... | 29 | 7.8 |
|---|
>TUD_DROME (P25823) Maternal protein tudor| Length = 2515 Score = 30.8 bits (68), Expect = 2.7 Identities = 14/51 (27%), Positives = 26/51 (50%) Frame = +2 Query: 2 AGDNDXDPSSDSIEKNTDGLLADGRDQLTNSVYHPLQQAEEENQLHDNVEI 154 A ++ P+ + K+ D ++ D HP+ Q + NQLH+N++I Sbjct: 1602 AAESKQAPAQEDPYKDLDCVVLSHCDNPAQFYVHPIDQLSKLNQLHENLQI 1652
>T2R38_MOUSE (Q7TQA6) Putative taste receptor type 2 member 38 (T2R38) (mT2r31)| Length = 331 Score = 30.0 bits (66), Expect = 4.6 Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 5/60 (8%) Frame = -2 Query: 514 NKLHYYLCLAICLLY-----RFSLPLPVQVRSCLRFTTPVAYEVKLLSHVICTALCLKTF 350 N++ +L + LLY RFS P+ V S + V LL ICTALCL F Sbjct: 103 NQVSLWLAACLSLLYCSKIVRFSHTFPLHVASWVSRRFLQMLLVVLLLSCICTALCLWDF 162
>NHR10_CAEEL (P41999) Nuclear hormone receptor family member nhr-10| Length = 395 Score = 29.6 bits (65), Expect = 6.0 Identities = 10/27 (37%), Positives = 18/27 (66%) Frame = +2 Query: 20 DPSSDSIEKNTDGLLADGRDQLTNSVY 100 +P +D ++ N L+DGR +TN++Y Sbjct: 307 NPDADDVDSNAKKTLSDGRSAITNALY 333
>STX11_MOUSE (Q9D3G5) Syntaxin-11| Length = 287 Score = 29.6 bits (65), Expect = 6.0 Identities = 16/44 (36%), Positives = 22/44 (50%) Frame = +2 Query: 5 GDNDXDPSSDSIEKNTDGLLADGRDQLTNSVYHPLQQAEEENQL 136 GDND D + I TD +L S+Y +Q ++ENQL Sbjct: 22 GDNDFDAPREDIVFETDNIL--------ESLYRVIQDIQDENQL 57
>C1TC_YEAST (P07245) C-1-tetrahydrofolate synthase, cytoplasmic (C1-THF| synthase) [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9); Formyltetrahydrofolate synthetase (EC 6.3.4.3)] Length = 946 Score = 29.3 bits (64), Expect = 7.8 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = +2 Query: 401 LICNRSGKSKATPDLHRKRKRKSIEKTN 484 L+ ++GK K TP + R+ R I+KTN Sbjct: 484 LVPRKNGKRKFTPSMQRRLNRLGIQKTN 511 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 74,905,804 Number of Sequences: 219361 Number of extensions: 1462950 Number of successful extensions: 3552 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 3483 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3549 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4528412720 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)