ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd18l24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|CR716361.2|CNS0GFOY Tetraodon nigroviridis full-length cDNA 44 0.48
2emb|BX511060.7| Zebrafish DNA sequence from clone CH211-210L19 i... 44 0.48
3ref|NM_106479.2| Arabidopsis thaliana GRF2; protein phosphorylat... 42 1.9
4gb|AC167117.5| Mus musculus chromosome 1, clone RP24-73D23, comp... 42 1.9
5ref|XM_464968.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.9
6gb|AC116695.12| Mus musculus chromosome 1, clone RP24-407C10, co... 42 1.9
7gb|AC074322.4| Homo sapiens chromosome 10 clone RP11-168O22, com... 42 1.9
8dbj|AB236849.1| Trifolium pratense RNA for putative arginine dec... 42 1.9
9dbj|AB236799.1| Trifolium pratense RNA for putative arginine dec... 42 1.9
10dbj|AB236762.1| Trifolium pratense RNA for putative arginine dec... 42 1.9
11gb|AF462807.1|AF462807 Arabidopsis thaliana At1g78300/F3F9_16 mR... 42 1.9
12emb|BX569800.8| Zebrafish DNA sequence from clone DKEY-106C24 in... 42 1.9
13dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
14emb|BX814726.1|CNS0ACAO Arabidopsis thaliana Full-length cDNA Co... 42 1.9
15emb|BX816370.1|CNS0ABVG Arabidopsis thaliana Full-length cDNA Co... 42 1.9
16emb|BX813898.1|CNS0AC4T Arabidopsis thaliana Full-length cDNA Co... 42 1.9
17emb|BX815228.1|CNS0ABJ2 Arabidopsis thaliana Full-length cDNA Co... 42 1.9
18emb|BX814839.1|CNS0ABET Arabidopsis thaliana Full-length cDNA Co... 42 1.9
19gb|AY086467.1| Arabidopsis thaliana clone 25284 mRNA, complete s... 42 1.9
20gb|AC013430.5|AC013430 Genomic sequence for Arabidopsis thaliana... 42 1.9
21dbj|AP005533.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
22dbj|AP004001.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
23emb|Z37540.1|PSARGDECA P.sativum mRNA encoding arginine decarbox... 42 1.9
24dbj|AK064078.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.9
25emb|AL953866.5| Zebrafish DNA sequence from clone DKEY-60I9 in l... 42 1.9
26gb|U09376.1|ATU09376 Arabidopsis thaliana GF14omega isoform (GRF... 42 1.9
27gb|M96855.1|ATHGF14A Arabidopsis thaliana GF14 mRNA, complete cds 42 1.9
28gb|AC154301.2| Mus musculus BAC clone RP23-392P5 from chromosome... 40 7.6
29gb|AC135104.22| Mus musculus strain C57BL/6J clone rp23-206l6, c... 40 7.6
30gb|AC122182.4| Mus musculus BAC clone RP23-12G9 from 1, complete... 40 7.6
31gb|AC151526.7| Medicago truncatula clone mth2-78c9, complete seq... 40 7.6
32emb|BX908753.8| Zebrafish DNA sequence from clone RP71-80I17 in ... 40 7.6
33emb|AL445440.9| Human DNA sequence from clone RP11-185G1 on chro... 40 7.6
34gb|AC007346.6| Homo sapiens chromosome 16 clone RP11-467J12, com... 40 7.6
35gb|AC011090.9| Homo sapiens chromosome 17, clone CTD-2005K23, co... 40 7.6
36gb|AC023751.3| Drosophila melanogaster 3L BAC RP98-31C17 (Roswel... 40 7.6
37gb|AC109471.3| Homo sapiens chromosome 5 clone RP11-395P13, comp... 40 7.6
38emb|BX322601.9| Zebrafish DNA sequence from clone DKEY-170H8 in ... 40 7.6
39emb|BX088704.7| Zebrafish DNA sequence from clone CH211-208M6 in... 40 7.6
40gb|AC160108.2| Mus musculus BAC clone RP24-155K11 from chromosom... 40 7.6
41gb|AC154340.3| Mus musculus BAC clone RP23-238B22 from chromosom... 40 7.6
42emb|BX649600.8| Zebrafish DNA sequence from clone CH211-222M18 i... 40 7.6
43emb|AL928608.17| Mouse DNA sequence from clone RP23-275P21 on ch... 40 7.6
44gb|AE003482.4| Drosophila melanogaster chromosome 3L, section 16... 40 7.6
45gb|U77952.1|MDU77952 Malus domestica auxin binding protein (ABP)... 40 7.6
46emb|AL645684.16| Mouse DNA sequence from clone RP23-35E7 on chro... 40 7.6 
>emb|CR716361.2|CNS0GFOY Tetraodon nigroviridis full-length cDNA
          Length = 668

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 330 ataatacatatgctctcctaaa 351
           ||||||||||||||||||||||
Sbjct: 570 ataatacatatgctctcctaaa 591
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>emb|BX511060.7| Zebrafish DNA sequence from clone CH211-210L19 in linkage group 10,
              complete sequence
          Length = 139250

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 462    gaaaatctatagagaagacaaa 483
              ||||||||||||||||||||||
Sbjct: 115120 gaaaatctatagagaagacaaa 115141
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>ref|NM_106479.2| Arabidopsis thaliana GRF2; protein phosphorylated amino acid binding
            AT1G78300 (GRF2) mRNA, complete cds
          Length = 1325

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 295  gaaattccaaaccctagaaga 315
            |||||||||||||||||||||
Sbjct: 1037 gaaattccaaaccctagaaga 1017
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>gb|AC167117.5| Mus musculus chromosome 1, clone RP24-73D23, complete sequence
          Length = 166651

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 258   agcaattggagatggcaaagcaacc 282
             ||||||||||||||||| |||||||
Sbjct: 52646 agcaattggagatggcacagcaacc 52670
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>ref|XM_464968.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3154

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 174 ataccagcagtgaaactgattcagacagcagctcagg 210
           |||| ||||||||||   |||||||||||||||||||
Sbjct: 765 atacaagcagtgaaagcaattcagacagcagctcagg 801
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>gb|AC116695.12| Mus musculus chromosome 1, clone RP24-407C10, complete sequence
          Length = 199978

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 258    agcaattggagatggcaaagcaacc 282
              ||||||||||||||||| |||||||
Sbjct: 160720 agcaattggagatggcacagcaacc 160744
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>gb|AC074322.4| Homo sapiens chromosome 10 clone RP11-168O22, complete sequence
          Length = 140880

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 25    atcttcagatagtattgaaaa 45
             |||||||||||||||||||||
Sbjct: 79565 atcttcagatagtattgaaaa 79585
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>dbj|AB236849.1| Trifolium pratense RNA for putative arginine decarboxylase, complete
            cds, clone: C559
          Length = 2851

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 99   accatccactgcagcaagctg 119
            |||||||||||||||||||||
Sbjct: 1950 accatccactgcagcaagctg 1930
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>dbj|AB236799.1| Trifolium pratense RNA for putative arginine decarboxylase, complete
            cds, clone: C1942
          Length = 2864

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 99   accatccactgcagcaagctg 119
            |||||||||||||||||||||
Sbjct: 1938 accatccactgcagcaagctg 1918
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>dbj|AB236762.1| Trifolium pratense RNA for putative arginine decarboxylase, partial
           cds, clone: C1551
          Length = 1180

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 99  accatccactgcagcaagctg 119
           |||||||||||||||||||||
Sbjct: 117 accatccactgcagcaagctg 97
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>gb|AF462807.1|AF462807 Arabidopsis thaliana At1g78300/F3F9_16 mRNA, complete cds
          Length = 1205

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 295 gaaattccaaaccctagaaga 315
           |||||||||||||||||||||
Sbjct: 958 gaaattccaaaccctagaaga 938
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>emb|BX569800.8| Zebrafish DNA sequence from clone DKEY-106C24 in linkage group 21,
              complete sequence
          Length = 188915

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 446    cacaggaagcggaagagaaaa 466
              |||||||||||||||||||||
Sbjct: 135354 cacaggaagcggaagagaaaa 135374
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                     
Query: 174      ataccagcagtgaaactgattcagacagcagctcagg 210
                |||| ||||||||||   |||||||||||||||||||
Sbjct: 10693461 atacaagcagtgaaagcaattcagacagcagctcagg 10693497
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>emb|BX814726.1|CNS0ACAO Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB91ZC01 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1148

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 295 gaaattccaaaccctagaaga 315
           |||||||||||||||||||||
Sbjct: 953 gaaattccaaaccctagaaga 933
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>emb|BX816370.1|CNS0ABVG Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH44ZC06 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1127

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 295 gaaattccaaaccctagaaga 315
           |||||||||||||||||||||
Sbjct: 942 gaaattccaaaccctagaaga 922
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>emb|BX813898.1|CNS0AC4T Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB46ZA12 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1116

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 295 gaaattccaaaccctagaaga 315
           |||||||||||||||||||||
Sbjct: 913 gaaattccaaaccctagaaga 893
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>emb|BX815228.1|CNS0ABJ2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS44ZB03 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1161

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 295 gaaattccaaaccctagaaga 315
           |||||||||||||||||||||
Sbjct: 942 gaaattccaaaccctagaaga 922
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>emb|BX814839.1|CNS0ABET Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS10ZE06 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1155

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 295 gaaattccaaaccctagaaga 315
           |||||||||||||||||||||
Sbjct: 941 gaaattccaaaccctagaaga 921
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>gb|AY086467.1| Arabidopsis thaliana clone 25284 mRNA, complete sequence
          Length = 1283

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 295  gaaattccaaaccctagaaga 315
            |||||||||||||||||||||
Sbjct: 1037 gaaattccaaaccctagaaga 1017
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>gb|AC013430.5|AC013430 Genomic sequence for Arabidopsis thaliana BAC F3F9 from chromosome I,
             complete sequence
          Length = 95769

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 295   gaaattccaaaccctagaaga 315
             |||||||||||||||||||||
Sbjct: 63337 gaaattccaaaccctagaaga 63357
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>dbj|AP005533.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0018M09
          Length = 157377

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                   
Query: 174    ataccagcagtgaaactgattcagacagcagctcagg 210
              |||| ||||||||||   |||||||||||||||||||
Sbjct: 111151 atacaagcagtgaaagcaattcagacagcagctcagg 111187
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>dbj|AP004001.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1115_D03
          Length = 169378

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 174   ataccagcagtgaaactgattcagacagcagctcagg 210
             |||| ||||||||||   |||||||||||||||||||
Sbjct: 32942 atacaagcagtgaaagcaattcagacagcagctcagg 32978
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>emb|Z37540.1|PSARGDECA P.sativum mRNA encoding arginine decarboxylase
          Length = 3161

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 99   accatccactgcagcaagctg 119
            |||||||||||||||||||||
Sbjct: 2030 accatccactgcagcaagctg 2010
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>dbj|AK064078.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-A08, full
           insert sequence
          Length = 3154

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 174 ataccagcagtgaaactgattcagacagcagctcagg 210
           |||| ||||||||||   |||||||||||||||||||
Sbjct: 765 atacaagcagtgaaagcaattcagacagcagctcagg 801
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>emb|AL953866.5| Zebrafish DNA sequence from clone DKEY-60I9 in linkage group 21, complete
              sequence
          Length = 198925

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 446    cacaggaagcggaagagaaaa 466
              |||||||||||||||||||||
Sbjct: 124861 cacaggaagcggaagagaaaa 124881
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>gb|U09376.1|ATU09376 Arabidopsis thaliana GF14omega isoform (GRF2) gene, complete cds
          Length = 2250

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 295  gaaattccaaaccctagaaga 315
            |||||||||||||||||||||
Sbjct: 1798 gaaattccaaaccctagaaga 1778
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>gb|M96855.1|ATHGF14A Arabidopsis thaliana GF14 mRNA, complete cds
          Length = 1133

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 295 gaaattccaaaccctagaaga 315
           |||||||||||||||||||||
Sbjct: 891 gaaattccaaaccctagaaga 871
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>gb|AC154301.2| Mus musculus BAC clone RP23-392P5 from chromosome 14, complete sequence
          Length = 207510

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 292    aatgaaattccaaaccctag 311
              ||||||||||||||||||||
Sbjct: 157707 aatgaaattccaaaccctag 157688
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>gb|AC135104.22| Mus musculus strain C57BL/6J clone rp23-206l6, complete sequence
          Length = 198294

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 265   ggagatggcaaagcaaccag 284
             ||||||||||||||||||||
Sbjct: 99853 ggagatggcaaagcaaccag 99834
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>gb|AC122182.4| Mus musculus BAC clone RP23-12G9 from 1, complete sequence
          Length = 197197

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 374   acaaattacatgagaaagaa 393
             ||||||||||||||||||||
Sbjct: 75760 acaaattacatgagaaagaa 75741
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>gb|AC151526.7| Medicago truncatula clone mth2-78c9, complete sequence
          Length = 134556

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 469   tatagagaagacaaattgccaagcaaaggtaatagt 504
             ||||||||||| || |||||||  ||||||||||||
Sbjct: 46453 tatagagaagataagttgccaaagaaaggtaatagt 46488
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>emb|BX908753.8| Zebrafish DNA sequence from clone RP71-80I17 in linkage group 6,
             complete sequence
          Length = 93379

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 280   accagagcctggaatgaaat 299
             ||||||||||||||||||||
Sbjct: 19023 accagagcctggaatgaaat 19042
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>emb|AL445440.9| Human DNA sequence from clone RP11-185G1 on chromosome 9, complete
             sequence
          Length = 165833

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 483   attgccaagcaaaggtaata 502
             ||||||||||||||||||||
Sbjct: 75404 attgccaagcaaaggtaata 75423
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>gb|AC007346.6| Homo sapiens chromosome 16 clone RP11-467J12, complete sequence
          Length = 204130

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    tagtattgaaaagaatacag 53
             ||||||||||||||||||||
Sbjct: 50969 tagtattgaaaagaatacag 50950
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>gb|AC011090.9| Homo sapiens chromosome 17, clone CTD-2005K23, complete sequence
          Length = 94042

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 478   gacaaattgccaagcaaagg 497
             ||||||||||||||||||||
Sbjct: 46001 gacaaattgccaagcaaagg 45982
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>gb|AC023751.3| Drosophila melanogaster 3L BAC RP98-31C17 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 187437

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 371   ggtacaaattacatgagaaa 390
             ||||||||||||||||||||
Sbjct: 48352 ggtacaaattacatgagaaa 48333
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>gb|AC109471.3| Homo sapiens chromosome 5 clone RP11-395P13, complete sequence
          Length = 164473

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 175    taccagcagtgaaactgatt 194
              ||||||||||||||||||||
Sbjct: 137115 taccagcagtgaaactgatt 137096
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>emb|BX322601.9| Zebrafish DNA sequence from clone DKEY-170H8 in linkage group 7, complete
              sequence
          Length = 210153

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 488    caagcaaaggtaatagtgaa 507
              ||||||||||||||||||||
Sbjct: 189001 caagcaaaggtaatagtgaa 189020
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>emb|BX088704.7| Zebrafish DNA sequence from clone CH211-208M6 in linkage group 7,
              complete sequence
          Length = 209042

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 488    caagcaaaggtaatagtgaa 507
              ||||||||||||||||||||
Sbjct: 204032 caagcaaaggtaatagtgaa 204051
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>gb|AC160108.2| Mus musculus BAC clone RP24-155K11 from chromosome 13, complete
             sequence
          Length = 168567

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 376   aaattacatgagaaagaagt 395
             ||||||||||||||||||||
Sbjct: 28149 aaattacatgagaaagaagt 28130
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>gb|AC154340.3| Mus musculus BAC clone RP23-238B22 from chromosome 14, complete sequence
          Length = 210115

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 292    aatgaaattccaaaccctag 311
              ||||||||||||||||||||
Sbjct: 205795 aatgaaattccaaaccctag 205814
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>emb|BX649600.8| Zebrafish DNA sequence from clone CH211-222M18 in linkage group 18,
              complete sequence
          Length = 228633

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 458    aagagaaaatctatagagaa 477
              ||||||||||||||||||||
Sbjct: 120682 aagagaaaatctatagagaa 120663
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>emb|AL928608.17| Mouse DNA sequence from clone RP23-275P21 on chromosome 2, complete
              sequence
          Length = 152515

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 240    acttctatcctcaaattgag 259
              ||||||||||||||||||||
Sbjct: 138987 acttctatcctcaaattgag 139006
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>gb|AE003482.4| Drosophila melanogaster chromosome 3L, section 16 of 83 of the complete
              sequence
          Length = 302417

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 371    ggtacaaattacatgagaaa 390
              ||||||||||||||||||||
Sbjct: 121362 ggtacaaattacatgagaaa 121343
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>gb|U77952.1|MDU77952 Malus domestica auxin binding protein (ABP) mRNA, complete cds
          Length = 711

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 110 cagcaagctgaagaagaaaa 129
           ||||||||||||||||||||
Sbjct: 57  cagcaagctgaagaagaaaa 38
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>emb|AL645684.16| Mouse DNA sequence from clone RP23-35E7 on chromosome 11, complete
             sequence
          Length = 122461

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 265   ggagatggcaaagcaaccag 284
             ||||||||||||||||||||
Sbjct: 39602 ggagatggcaaagcaaccag 39621


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,281,706
Number of Sequences: 3902068
Number of extensions: 5281706
Number of successful extensions: 101117
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 100986
Number of HSP's gapped (non-prelim): 132
length of query: 557
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 534
effective length of database: 17,143,297,704
effective search space: 9154520973936
effective search space used: 9154520973936
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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