ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd18l22 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1148 bits (579), Expect = 0.0 Identities = 591/594 (99%), Gaps = 1/594 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 120057 ggcttgcggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaat 119999 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119998 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 119939 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119938 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 119879 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119878 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 119819 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119818 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 119759 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 119758 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacg 119699 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119698 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 119639 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119638 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 119579 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119578 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 119519 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119518 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 119465 Score = 1148 bits (579), Expect = 0.0 Identities = 591/594 (99%), Gaps = 1/594 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 94837 ggcttgcggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaat 94895 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94896 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 94955 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94956 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 95015 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95016 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 95075 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95076 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 95135 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 95136 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacg 95195 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95196 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 95255 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95256 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 95315 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95316 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 95375 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95376 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 95429
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 1140 bits (575), Expect = 0.0 Identities = 590/594 (99%), Gaps = 1/594 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 968 ggcttgcggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaat 910 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 909 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 850 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 849 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 790 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 789 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 730 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 729 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 670 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 669 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacg 610 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 609 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 550 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 549 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 490 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 489 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 430 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 429 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 376
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1140 bits (575), Expect = 0.0 Identities = 590/594 (99%), Gaps = 1/594 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 44882 ggcttgcggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaat 44824 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 44823 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 44764 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44763 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 44704 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44703 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 44644 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44643 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 44584 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 44583 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacg 44524 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44523 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 44464 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44463 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 44404 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44403 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 44344 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44343 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 44290 Score = 1140 bits (575), Expect = 0.0 Identities = 590/594 (99%), Gaps = 1/594 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 20236 ggcttgcggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaat 20294 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 20295 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 20354 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20355 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 20414 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20415 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 20474 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20475 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 20534 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 20535 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacg 20594 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20595 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 20654 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20655 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 20714 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20715 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 20774 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20775 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 20828
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1140 bits (575), Expect = 0.0 Identities = 590/594 (99%), Gaps = 1/594 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 1511 ggcttgcggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaat 1453 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1452 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 1393 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1392 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 1333 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1332 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 1273 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1272 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 1213 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1212 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacg 1153 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1152 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 1093 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1092 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 1033 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1032 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 973 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 972 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 919
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1140 bits (575), Expect = 0.0 Identities = 590/594 (99%), Gaps = 1/594 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 123721 ggcttgcggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaat 123663 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 123662 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 123603 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123602 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 123543 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123542 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 123483 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123482 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 123423 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 123422 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacg 123363 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123362 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 123303 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123302 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 123243 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123242 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 123183 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123182 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 123129 Score = 1140 bits (575), Expect = 0.0 Identities = 590/594 (99%), Gaps = 1/594 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 99116 ggcttgcggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaat 99174 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 99175 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 99234 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99235 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 99294 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99295 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 99354 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99355 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 99414 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 99415 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacg 99474 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99475 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 99534 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99535 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 99594 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99595 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 99654 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99655 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 99708
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1140 bits (575), Expect = 0.0 Identities = 590/594 (99%), Gaps = 1/594 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 124438 ggcttgcggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaat 124380 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 124379 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 124320 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124319 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 124260 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124259 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 124200 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124199 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 124140 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 124139 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacg 124080 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124079 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 124020 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124019 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 123960 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123959 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 123900 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123899 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 123846 Score = 1140 bits (575), Expect = 0.0 Identities = 590/594 (99%), Gaps = 1/594 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 99793 ggcttgcggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaat 99851 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 99852 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 99911 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99912 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 99971 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99972 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 100031 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100032 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 100091 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 100092 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacg 100151 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100152 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 100211 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100212 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 100271 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100272 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 100331 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100332 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 100385
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1132 bits (571), Expect = 0.0 Identities = 589/594 (99%), Gaps = 1/594 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| Sbjct: 118838 ggcttgcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaat 118780 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 118779 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 118720 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118719 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 118660 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118659 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 118600 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118599 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 118540 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 118539 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacg 118480 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118479 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 118420 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118419 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 118360 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118359 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 118300 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118299 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 118246
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1132 bits (571), Expect = 0.0 Identities = 589/594 (99%), Gaps = 1/594 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| Sbjct: 119922 ggcttgcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaat 119864 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 119863 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 119804 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119803 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 119744 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119743 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 119684 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119683 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 119624 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 119623 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacg 119564 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119563 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 119504 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119503 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 119444 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119443 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 119384 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119383 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 119330 Score = 1132 bits (571), Expect = 0.0 Identities = 589/594 (99%), Gaps = 1/594 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| Sbjct: 95234 ggcttgcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaat 95292 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 95293 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 95352 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95353 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 95412 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95413 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 95472 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95473 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 95532 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 95533 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacg 95592 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95593 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 95652 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95653 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 95712 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95713 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 95772 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95773 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 95826
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1132 bits (571), Expect = 0.0 Identities = 589/594 (99%), Gaps = 1/594 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| Sbjct: 119922 ggcttgcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaat 119864 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 119863 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 119804 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119803 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 119744 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119743 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 119684 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119683 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 119624 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 119623 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacg 119564 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119563 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 119504 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119503 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 119444 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119443 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 119384 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119383 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 119330 Score = 1132 bits (571), Expect = 0.0 Identities = 589/594 (99%), Gaps = 1/594 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| Sbjct: 95234 ggcttgcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaat 95292 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 95293 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 95352 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95353 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 95412 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95413 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 95472 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95473 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 95532 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 95533 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacg 95592 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95593 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 95652 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95653 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 95712 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95713 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 95772 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95773 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 95826
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1132 bits (571), Expect = 0.0 Identities = 589/594 (99%), Gaps = 1/594 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| Sbjct: 119871 ggcttgcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaat 119813 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 119812 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 119753 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119752 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 119693 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119692 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 119633 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119632 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 119573 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 119572 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacg 119513 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119512 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 119453 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119452 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 119393 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119392 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 119333 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119332 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 119279 Score = 1132 bits (571), Expect = 0.0 Identities = 589/594 (99%), Gaps = 1/594 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| Sbjct: 95179 ggcttgcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaat 95237 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 95238 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 95297 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95298 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 95357 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95358 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 95417 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95418 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 95477 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 95478 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacg 95537 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95538 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 95597 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95598 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 95657 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95658 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 95717 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95718 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 95771
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1132 bits (571), Expect = 0.0 Identities = 589/594 (99%), Gaps = 1/594 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| Sbjct: 31507812 ggcttgcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaat 31507870 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 31507871 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 31507930 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507931 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 31507990 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507991 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 31508050 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508051 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 31508110 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 31508111 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacg 31508170 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508171 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 31508230 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508231 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 31508290 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508291 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 31508350 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508351 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 31508404
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1132 bits (571), Expect = 0.0 Identities = 589/594 (99%), Gaps = 1/594 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| Sbjct: 84784 ggcttgcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaat 84726 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 84725 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 84666 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84665 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 84606 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84605 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 84546 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84545 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 84486 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 84485 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacg 84426 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84425 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 84366 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84365 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 84306 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84305 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 84246 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84245 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 84192
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1132 bits (571), Expect = 0.0 Identities = 589/594 (99%), Gaps = 1/594 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| Sbjct: 119891 ggcttgcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaat 119833 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 119832 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 119773 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119772 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 119713 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119712 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 119653 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119652 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 119593 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 119592 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacg 119533 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119532 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 119473 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119472 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 119413 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119412 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 119353 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119352 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 119299 Score = 1132 bits (571), Expect = 0.0 Identities = 589/594 (99%), Gaps = 1/594 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| Sbjct: 95227 ggcttgcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaat 95285 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 95286 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 95345 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95346 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 95405 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95406 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 95465 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95466 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 95525 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 95526 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacg 95585 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95586 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 95645 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95646 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 95705 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95706 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 95765 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95766 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 95819
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1132 bits (571), Expect = 0.0 Identities = 589/594 (99%), Gaps = 1/594 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| Sbjct: 122276 ggcttgcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaat 122334 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 122335 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 122394 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122395 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 122454 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122455 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 122514 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122515 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 122574 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 122575 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacg 122634 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122635 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 122694 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122695 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 122754 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122755 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 122814 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122815 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 122868 Score = 1124 bits (567), Expect = 0.0 Identities = 588/594 (98%), Gaps = 1/594 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| Sbjct: 14001 ggcttgcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaat 14059 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 14060 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 14119 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14120 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 14179 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14180 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 14239 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14240 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 14299 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 14300 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacg 14359 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 14360 ctctgacccgagtagcatggggcacgtggaatcctgtgtgaatcagcaaggaccaccttg 14419 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14420 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 14479 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14480 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 14539 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14540 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 14593
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1132 bits (571), Expect = 0.0 Identities = 589/594 (99%), Gaps = 1/594 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| Sbjct: 58610 ggcttgcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaat 58552 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 58551 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 58492 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58491 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 58432 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58431 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 58372 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58371 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 58312 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 58311 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacg 58252 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58251 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 58192 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58191 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 58132 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58131 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 58072 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58071 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 58018
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1132 bits (571), Expect = 0.0 Identities = 589/594 (99%), Gaps = 1/594 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| Sbjct: 9268161 ggcttgcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaat 9268219 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 9268220 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 9268279 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268280 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 9268339 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268340 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 9268399 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268400 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 9268459 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 9268460 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacg 9268519 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268520 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 9268579 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268580 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 9268639 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268640 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 9268699 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268700 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 9268753 Score = 1132 bits (571), Expect = 0.0 Identities = 589/594 (99%), Gaps = 1/594 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| Sbjct: 9227661 ggcttgcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaat 9227719 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 9227720 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 9227779 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227780 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 9227839 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227840 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 9227899 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227900 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 9227959 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 9227960 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacg 9228019 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228020 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 9228079 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228080 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 9228139 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228140 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 9228199 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228200 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 9228253 Score = 1132 bits (571), Expect = 0.0 Identities = 589/594 (99%), Gaps = 1/594 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| Sbjct: 9164250 ggcttgcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaat 9164308 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 9164309 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 9164368 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164369 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 9164428 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164429 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 9164488 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164489 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 9164548 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 9164549 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacg 9164608 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164609 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 9164668 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164669 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 9164728 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164729 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 9164788 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164789 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 9164842 Score = 1124 bits (567), Expect = 0.0 Identities = 588/594 (98%), Gaps = 1/594 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| Sbjct: 9056075 ggcttgcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaat 9056133 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 9056134 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 9056193 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056194 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 9056253 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056254 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 9056313 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056314 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 9056373 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 9056374 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacg 9056433 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 9056434 ctctgacccgagtagcatggggcacgtggaatcctgtgtgaatcagcaaggaccaccttg 9056493 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056494 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 9056553 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056554 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 9056613 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056614 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 9056667 Score = 165 bits (83), Expect = 2e-37 Identities = 101/107 (94%) Strand = Plus / Minus Query: 450 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 509 |||||| |||||||||||||| || |||||||||||| |||||||||||||||||||||| Sbjct: 25171513 ggtgactgatagcgaagtagtgccatgagggaaaggtaaaaagaacccccagtgggtagt 25171454 Query: 510 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 556 |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 25171453 gaaatagaacatgaaaccgtgctgagctcccaagcagtggtagggga 25171407
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1132 bits (571), Expect = 0.0 Identities = 589/594 (99%), Gaps = 1/594 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| Sbjct: 19938146 ggcttgcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaat 19938204 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 19938205 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 19938264 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938265 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 19938324 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938325 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 19938384 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938385 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 19938444 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 19938445 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacg 19938504 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938505 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 19938564 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938565 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 19938624 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938625 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 19938684 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938685 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 19938738 Score = 1132 bits (571), Expect = 0.0 Identities = 589/594 (99%), Gaps = 1/594 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| Sbjct: 10277285 ggcttgcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaat 10277227 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 10277226 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 10277167 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277166 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 10277107 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277106 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 10277047 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277046 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 10276987 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 10276986 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacg 10276927 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276926 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 10276867 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276866 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 10276807 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276806 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 10276747 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276746 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 10276693 Score = 1124 bits (567), Expect = 0.0 Identities = 588/594 (98%), Gaps = 1/594 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| Sbjct: 10387013 ggcttgcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaat 10387071 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 10387072 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 10387131 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 10387191 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 10387251 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 10387311 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 10387312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacg 10387371 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 10387431 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 10387432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgagaa 10387491 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 10387551 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 10387605 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 468 agtaccgtgagggaaaggtgaaaagaacccc 498 ||||||||||||||||||||||||||||||| Sbjct: 2736641 agtaccgtgagggaaaggtgaaaagaacccc 2736611 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 293 ttgtgctgctaggcgaagcggttgagtgc 321 ||||||| ||||| ||||||||||||||| Sbjct: 8517723 ttgtgcttctaggtgaagcggttgagtgc 8517751
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1132 bits (571), Expect = 0.0 Identities = 589/594 (99%), Gaps = 1/594 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| Sbjct: 31598328 ggcttgcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaat 31598386 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 31598387 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 31598446 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598447 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 31598506 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598507 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 31598566 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598567 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 31598626 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 31598627 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacg 31598686 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598687 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 31598746 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598747 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 31598806 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598807 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 31598866 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598867 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 31598920
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1132 bits (571), Expect = 0.0 Identities = 589/594 (99%), Gaps = 1/594 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| Sbjct: 33525644 ggcttgcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaat 33525702 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 33525703 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 33525762 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525763 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 33525822 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525823 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 33525882 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525883 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 33525942 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 33525943 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacg 33526002 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526003 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 33526062 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526063 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 33526122 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526123 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 33526182 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526183 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 33526236 Score = 250 bits (126), Expect = 5e-63 Identities = 132/134 (98%) Strand = Plus / Minus Query: 472 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 531 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 16678101 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 16678042 Query: 532 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 591 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16678041 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 16677982 Query: 592 gccggcgactcata 605 |||||||||||||| Sbjct: 16677981 gccggcgactcata 16677968 Score = 194 bits (98), Expect = 2e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 486 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 545 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 32744772 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 32744713 Query: 546 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 595 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32744712 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 32744663 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 452 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 498 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33538588 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33538634 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 452 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 498 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33499956 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33500002 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 479 ggaaaggtgaaaagaacccccagtgggtagtgaaataga 517 |||||||||||||||||||| ||| |||||||||||||| Sbjct: 37705382 ggaaaggtgaaaagaacccctagtaggtagtgaaataga 37705420 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 43 acgaggaagggcgtagcaagcgacgaaatgcttc 76 |||||| ||||| ||||||||||||||||||||| Sbjct: 19455163 acgaggtagggcatagcaagcgacgaaatgcttc 19455196
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1132 bits (571), Expect = 0.0 Identities = 589/594 (99%), Gaps = 1/594 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| Sbjct: 47897 ggcttgcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaat 47839 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 47838 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 47779 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47778 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 47719 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47718 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 47659 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47658 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 47599 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 47598 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacg 47539 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47538 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 47479 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47478 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 47419 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47418 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 47359 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47358 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 47305
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1132 bits (571), Expect = 0.0 Identities = 589/594 (99%), Gaps = 1/594 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| Sbjct: 70841 ggcttgcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaat 70899 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 70900 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 70959 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70960 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 71019 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71020 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 71079 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71080 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 71139 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 71140 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacg 71199 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71200 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 71259 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71260 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 71319 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71320 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 71379 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71380 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 71433 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 452 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 498 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 83785 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 83831 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 452 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 498 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 45153 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 45199
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 1132 bits (571), Expect = 0.0 Identities = 589/594 (99%), Gaps = 1/594 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| Sbjct: 13 ggcttgcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaat 71 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 131 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacg 371 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605
>dbj|AK059835.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C02, full insert sequence Length = 1395 Score = 1132 bits (571), Expect = 0.0 Identities = 589/594 (99%), Gaps = 1/594 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| Sbjct: 10 ggcttgcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaat 68 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 69 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 128 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 188 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 189 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 248 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 249 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 308 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 309 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacg 368 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 369 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 428 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 429 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 488 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 489 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 548 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 549 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 602
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1132 bits (571), Expect = 0.0 Identities = 589/594 (99%), Gaps = 1/594 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| Sbjct: 19949422 ggcttgcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaat 19949480 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 19949481 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 19949540 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949541 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 19949600 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949601 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 19949660 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949661 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 19949720 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 19949721 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacg 19949780 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949781 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 19949840 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949841 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 19949900 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949901 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 19949960 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949961 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 19950014 Score = 1132 bits (571), Expect = 0.0 Identities = 589/594 (99%), Gaps = 1/594 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| Sbjct: 10283324 ggcttgcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaat 10283266 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 10283265 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 10283206 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283205 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 10283146 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283145 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 10283086 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283085 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 10283026 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 10283025 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacg 10282966 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282965 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 10282906 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282905 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 10282846 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282845 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 10282786 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282785 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 10282732 Score = 1124 bits (567), Expect = 0.0 Identities = 588/594 (98%), Gaps = 1/594 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| Sbjct: 10393052 ggcttgcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaat 10393110 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 10393111 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 10393170 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393171 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 10393230 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393231 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 10393290 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393291 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 10393350 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 10393351 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacg 10393410 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393411 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 10393470 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 10393471 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgagaa 10393530 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393531 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 10393590 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393591 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 10393644 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 452 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 498 ||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 2736608 tgaccgatagcatacaagtaccgtgagggaaaggtgaaaagaacccc 2736562 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 293 ttgtgctgctaggcgaagcggttgagtgc 321 ||||||| ||||| ||||||||||||||| Sbjct: 8522822 ttgtgcttctaggtgaagcggttgagtgc 8522850
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1132 bits (571), Expect = 0.0 Identities = 589/594 (99%), Gaps = 1/594 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| Sbjct: 119865 ggcttgcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaat 119807 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 119806 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 119747 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119746 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 119687 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119686 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 119627 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119626 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 119567 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 119566 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacg 119507 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119506 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 119447 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119446 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 119387 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119386 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 119327 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119326 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 119273 Score = 1132 bits (571), Expect = 0.0 Identities = 589/594 (99%), Gaps = 1/594 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| Sbjct: 95174 ggcttgcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaat 95232 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 95233 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 95292 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95293 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 95352 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95353 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 95412 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95413 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 95472 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 95473 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacg 95532 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95533 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 95592 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95593 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 95652 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95653 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 95712 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95713 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 95766
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1124 bits (567), Expect = 0.0 Identities = 588/594 (98%), Gaps = 1/594 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| Sbjct: 140809 ggcttgcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaat 140867 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 140868 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 140927 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140928 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 140987 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140988 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 141047 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141048 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 141107 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 141108 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacg 141167 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 141168 ctctgacccgagtagcatggggcacgtggaatcctgtgtgaatcagcaaggaccaccttg 141227 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141228 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 141287 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141288 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 141347 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141348 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 141401
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1124 bits (567), Expect = 0.0 Identities = 588/594 (98%), Gaps = 1/594 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| Sbjct: 93405 ggcttgcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaat 93463 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 93464 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 93523 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93524 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 93583 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93584 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 93643 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93644 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 93703 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 93704 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacg 93763 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93764 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 93823 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 93824 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgagaa 93883 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93884 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 93943 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93944 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 93997
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1124 bits (567), Expect = 0.0 Identities = 588/594 (98%), Gaps = 1/594 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| Sbjct: 27469 ggcttgcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaat 27527 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 27528 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 27587 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27588 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 27647 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27648 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 27707 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27708 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 27767 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 27768 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacg 27827 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27828 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 27887 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 27888 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgagaa 27947 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27948 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 28007 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28008 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 28061
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1116 bits (563), Expect = 0.0 Identities = 587/594 (98%), Gaps = 1/594 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| Sbjct: 9242120 ggcttgcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaat 9242062 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 9242061 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 9242002 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9242001 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 9241942 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 9241941 gccagaggaaaagaaagcaaaagcgattcccgtagtagcagcgagcgaaatgggagcagc 9241882 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241881 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 9241822 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 9241821 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacg 9241762 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241761 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 9241702 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241701 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 9241642 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241641 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 9241582 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 9241581 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagctggcgactcata 9241528 Score = 67.9 bits (34), Expect = 4e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 175 actgaaacatcttagtagccagaggaaaagaaag 208 |||||||||||||||||||||||||||||||||| Sbjct: 10177929 actgaaacatcttagtagccagaggaaaagaaag 10177896
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1116 bits (563), Expect = 0.0 Identities = 587/594 (98%), Gaps = 1/594 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| Sbjct: 53333 ggcttgcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaat 53275 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 53274 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 53215 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53214 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 53155 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 53154 gccagaggaaaagaaagcaaaagcgattcccgtagtagcagcgagcgaaatgggagcagc 53095 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53094 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 53035 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 53034 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacg 52975 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52974 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 52915 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52914 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 52855 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52854 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 52795 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 52794 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagctggcgactcata 52741
>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full insert sequence Length = 3614 Score = 1082 bits (546), Expect = 0.0 Identities = 558/562 (99%) Strand = Plus / Plus Query: 44 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 103 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 Query: 104 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 163 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 61 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 120 Query: 164 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 223 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 Query: 224 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 283 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 Query: 284 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 343 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gtacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 Query: 344 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 403 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 301 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 360 Query: 404 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 Query: 464 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 523 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 Query: 524 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 583 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 481 aaccgtgctgagctcccaagcagtgggaggggaaattgatctctgaccgcgtgcctgttg 540 Query: 584 aagaatgagccggcgactcata 605 |||||||||||||||||||||| Sbjct: 541 aagaatgagccggcgactcata 562
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1078 bits (544), Expect = 0.0 Identities = 585/595 (98%), Gaps = 3/595 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaag-ggcgtagcaagcgacgaaa 70 |||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||| Sbjct: 123661 ggcttgcggtggatacctaggcacccagag-acgaggaagaggcgtagcaagcgacgaaa 123603 Query: 71 tgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctttta 130 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123602 tgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttg 123543 Query: 131 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 190 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123542 aactgcctgccgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 123483 Query: 191 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123482 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 123423 Query: 251 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 310 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 123422 cctaaaccgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaag 123363 Query: 311 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 370 |||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||| Sbjct: 123362 cggttgagtgccgcaccctagatggctatagtccagtagccgatagcatcact-gcttac 123304 Query: 371 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123303 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 123244 Query: 431 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123243 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 123184 Query: 491 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123183 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 123124 Query: 551 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123123 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 123069 Score = 1078 bits (544), Expect = 0.0 Identities = 585/595 (98%), Gaps = 3/595 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaag-ggcgtagcaagcgacgaaa 70 |||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||| Sbjct: 99076 ggcttgcggtggatacctaggcacccagag-acgaggaagaggcgtagcaagcgacgaaa 99134 Query: 71 tgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctttta 130 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99135 tgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttg 99194 Query: 131 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 190 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99195 aactgcctgccgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 99254 Query: 191 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99255 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 99314 Query: 251 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 310 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 99315 cctaaaccgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaag 99374 Query: 311 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 370 |||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||| Sbjct: 99375 cggttgagtgccgcaccctagatggctatagtccagtagccgatagcatcact-gcttac 99433 Query: 371 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99434 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 99493 Query: 431 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99494 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 99553 Query: 491 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99554 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 99613 Query: 551 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99614 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 99668
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1078 bits (544), Expect = 0.0 Identities = 585/595 (98%), Gaps = 3/595 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaag-ggcgtagcaagcgacgaaa 70 |||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||| Sbjct: 5429 ggcttgcggtggatacctaggcacccagag-acgaggaagaggcgtagcaagcgacgaaa 5487 Query: 71 tgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctttta 130 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5488 tgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttg 5547 Query: 131 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 190 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5548 aactgcctgccgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 5607 Query: 191 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5608 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 5667 Query: 251 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 310 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 5668 cctaaaccgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaag 5727 Query: 311 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 370 |||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||| Sbjct: 5728 cggttgagtgccgcaccctagatggctatagtccagtagccgatagcatcact-gcttac 5786 Query: 371 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5787 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 5846 Query: 431 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5847 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 5906 Query: 491 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5907 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 5966 Query: 551 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5967 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 6021
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1078 bits (544), Expect = 0.0 Identities = 585/595 (98%), Gaps = 3/595 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaag-ggcgtagcaagcgacgaaa 70 |||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||| Sbjct: 17 ggcttgcggtggatacctaggcacccagag-acgaggaagaggcgtagcaagcgacgaaa 75 Query: 71 tgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctttta 130 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 76 tgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttg 135 Query: 131 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 190 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136 aactgcctgccgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 195 Query: 191 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 196 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 255 Query: 251 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 310 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 256 cctaaaccgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaag 315 Query: 311 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 370 |||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||| Sbjct: 316 cggttgagtgccgcaccctagatggctatagtccagtagccgatagcatcact-gcttac 374 Query: 371 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 375 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 434 Query: 431 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 435 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 494 Query: 491 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 495 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 554 Query: 551 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 555 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 609
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 999 bits (504), Expect = 0.0 Identities = 510/512 (99%) Strand = Plus / Plus Query: 94 catagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagc 153 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1 catagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagc 60 Query: 154 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 120 Query: 214 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 180 Query: 274 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagat 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagat 240 Query: 334 ggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgggg 393 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 241 ggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgggg 300 Query: 394 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 360 Query: 454 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 420 Query: 514 tagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgc 573 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 tagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgc 480 Query: 574 gtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||| Sbjct: 481 gtgcctgttgaagaatgagccggcgactcata 512
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 983 bits (496), Expect = 0.0 Identities = 505/508 (99%) Strand = Plus / Plus Query: 98 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 157 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 60 Query: 158 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 217 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 120 Query: 218 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 277 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 180 Query: 278 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 240 Query: 338 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 397 ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 241 aaagtccagtagccgaaagcatcgctagcttacgctctgacccgagtagcatggggcacg 300 Query: 398 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 457 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 360 Query: 458 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 420 Query: 518 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 577 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 480 Query: 578 ctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||| Sbjct: 481 ctgttgaagaatgagccggcgactcata 508
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 954 bits (481), Expect = 0.0 Identities = 568/594 (95%), Gaps = 5/594 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 139571 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaat 139513 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | Sbjct: 139512 gcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcga 139453 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 139452 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 139394 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139393 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 139334 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 139333 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 139274 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 ||| |||| | |||||||||||||| | |||||||||||||||||||||||| ||||| | Sbjct: 139273 ggtggagtactgcaccctagatggcgagagtccagtagccgaaagcatcactggcttacg 139214 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139213 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 139154 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139153 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 139094 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 ||||||||| ||| ||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 139093 gaacccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtggga 139037 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 || ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139036 ggagaatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 138983 Score = 954 bits (481), Expect = 0.0 Identities = 568/594 (95%), Gaps = 5/594 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 110374 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaat 110432 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | Sbjct: 110433 gcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcga 110492 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 110493 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 110551 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110552 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 110611 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 110612 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 110671 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 ||| |||| | |||||||||||||| | |||||||||||||||||||||||| ||||| | Sbjct: 110672 ggtggagtactgcaccctagatggcgagagtccagtagccgaaagcatcactggcttacg 110731 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110732 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 110791 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110792 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 110851 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 ||||||||| ||| ||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 110852 gaacccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtggga 110908 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 || ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110909 ggagaatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 110962
>dbj|AK105328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A07, full insert sequence Length = 1055 Score = 954 bits (481), Expect = 0.0 Identities = 499/504 (99%), Gaps = 1/504 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| Sbjct: 14 ggcttgcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaat 72 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 73 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 132 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 192 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 193 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 252 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 253 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 312 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 313 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacg 372 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 373 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 432 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 433 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 492 Query: 492 gaacccccagtgggtagtgaaata 515 |||||||||||||||||||||||| Sbjct: 493 gaacccccagtgggtagtgaaata 516
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 954 bits (481), Expect = 0.0 Identities = 568/594 (95%), Gaps = 5/594 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 127849 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaat 127791 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | Sbjct: 127790 gcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcga 127731 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 127730 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 127672 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 127671 gccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagc 127612 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 127611 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcatgctgctaggcgaagc 127552 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 ||| |||||| |||||||||||||| | |||||||||||||||| ||||||||||||| | Sbjct: 127551 ggtggagtgctgcaccctagatggcgagagtccagtagccgaaaacatcactagcttacg 127492 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127491 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 127432 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127431 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 127372 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 ||||||||| ||| ||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 127371 gaacccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtggga 127315 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 || ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127314 ggagaatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 127261 Score = 954 bits (481), Expect = 0.0 Identities = 568/594 (95%), Gaps = 5/594 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 107073 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaat 107131 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | Sbjct: 107132 gcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcga 107191 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 107192 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 107250 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 107251 gccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagc 107310 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 107311 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcatgctgctaggcgaagc 107370 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 ||| |||||| |||||||||||||| | |||||||||||||||| ||||||||||||| | Sbjct: 107371 ggtggagtgctgcaccctagatggcgagagtccagtagccgaaaacatcactagcttacg 107430 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107431 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 107490 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107491 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 107550 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 ||||||||| ||| ||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 107551 gaacccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtggga 107607 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 || ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107608 ggagaatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 107661
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 954 bits (481), Expect = 0.0 Identities = 568/594 (95%), Gaps = 5/594 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 134208 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaat 134150 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | Sbjct: 134149 gcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcga 134090 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 134089 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 134031 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134030 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 133971 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 133970 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 133911 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 || || ||| |||||||||||||| | |||||||||||||||||||||||||||||| | Sbjct: 133910 agtggaatgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacg 133851 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133850 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 133791 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133790 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 133731 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 ||||||||| ||| ||||||||||||| |||||||| | |||||||||||||||||| Sbjct: 133730 gaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggga 133674 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 || ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133673 ggagaatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 133620 Score = 954 bits (481), Expect = 0.0 Identities = 568/594 (95%), Gaps = 5/594 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 103763 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaat 103821 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | Sbjct: 103822 gcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcga 103881 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 103882 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 103940 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103941 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 104000 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 104001 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 104060 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 || || ||| |||||||||||||| | |||||||||||||||||||||||||||||| | Sbjct: 104061 agtggaatgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacg 104120 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104121 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 104180 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104181 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 104240 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 ||||||||| ||| ||||||||||||| |||||||| | |||||||||||||||||| Sbjct: 104241 gaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggga 104297 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 || ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104298 ggagaatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 104351
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 938 bits (473), Expect = 0.0 Identities = 566/594 (95%), Gaps = 5/594 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 142093 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaat 142035 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| | Sbjct: 142034 gcttcggggagttgaaaataagcatagatccggagattcccgaatgggtcaacctttcga 141975 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 141974 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 141916 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141915 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 141856 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 141855 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 141796 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 |||||||| | |||||||||||||| | ||||||||| |||||||||||||| ||||| | Sbjct: 141795 ggttgagtactgcaccctagatggcgagagtccagtaaccgaaagcatcactggcttacg 141736 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141735 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 141676 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141675 taaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 141616 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 ||||||||| ||| ||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 141615 gaacccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtggga 141559 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 || ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141558 ggagaatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 141505 Score = 938 bits (473), Expect = 0.0 Identities = 566/594 (95%), Gaps = 5/594 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 111564 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaat 111622 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| | Sbjct: 111623 gcttcggggagttgaaaataagcatagatccggagattcccgaatgggtcaacctttcga 111682 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 111683 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 111741 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111742 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 111801 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 111802 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 111861 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 |||||||| | |||||||||||||| | ||||||||| |||||||||||||| ||||| | Sbjct: 111862 ggttgagtactgcaccctagatggcgagagtccagtaaccgaaagcatcactggcttacg 111921 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111922 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 111981 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111982 taaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 112041 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 ||||||||| ||| ||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 112042 gaacccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtggga 112098 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 || ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112099 ggagaatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 112152
>dbj|AK060204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-H12, full insert sequence Length = 1872 Score = 934 bits (471), Expect = 0.0 Identities = 474/475 (99%) Strand = Plus / Plus Query: 131 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 60 Query: 191 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 120 Query: 251 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 180 Query: 311 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 370 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttac 240 Query: 371 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 300 Query: 431 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 360 Query: 491 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 420 Query: 551 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 475
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 928 bits (468), Expect = 0.0 Identities = 565/594 (95%), Gaps = 9/594 (1%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||||||||| |||||||||||| Sbjct: 134966 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaat 134908 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | Sbjct: 134907 gcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcga 134848 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 134847 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 134789 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134788 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 134729 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 134728 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 134669 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 || |||||| |||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct: 134668 agtggagtgctgcaccctagatggctagagtccagtagccgaaagcatcactagcttacg 134609 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134608 ttctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 134549 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134548 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 134489 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 ||||||||| ||| ||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 134488 gaacccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtggga 134432 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134431 ggagaa----atctctgaccgcgtgcctgttgaagaatgagccggcgactcata 134382 Score = 928 bits (468), Expect = 0.0 Identities = 565/594 (95%), Gaps = 9/594 (1%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||||||||| |||||||||||| Sbjct: 105316 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaat 105374 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | Sbjct: 105375 gcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcga 105434 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 105435 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 105493 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105494 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 105553 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 105554 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 105613 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 || |||||| |||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct: 105614 agtggagtgctgcaccctagatggctagagtccagtagccgaaagcatcactagcttacg 105673 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105674 ttctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 105733 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105734 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 105793 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 ||||||||| ||| ||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 105794 gaacccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtggga 105850 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105851 ggagaa----atctctgaccgcgtgcctgttgaagaatgagccggcgactcata 105900
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 924 bits (466), Expect = 0.0 Identities = 565/594 (95%), Gaps = 7/594 (1%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||||||||| |||||||||||| Sbjct: 136576 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaat 136518 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || Sbjct: 136517 gcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcaa 136458 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 136457 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 136399 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136398 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 136339 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 136338 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 136279 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 ||| |||||| |||||||||||||| | |||||||||||||||||||||||||||||| | Sbjct: 136278 ggtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacg 136219 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136218 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 136159 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 136158 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaa 136099 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 ||||||||| ||| ||||||||||||| |||||||| | |||||||||||||||||| Sbjct: 136098 gaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggga 136042 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 || | || | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 136041 ggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 135990 Score = 924 bits (466), Expect = 0.0 Identities = 565/594 (95%), Gaps = 7/594 (1%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||||||||| |||||||||||| Sbjct: 105849 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaat 105907 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || Sbjct: 105908 gcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcaa 105967 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 105968 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 106026 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106027 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 106086 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 106087 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 106146 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 ||| |||||| |||||||||||||| | |||||||||||||||||||||||||||||| | Sbjct: 106147 ggtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacg 106206 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106207 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 106266 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 106267 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaa 106326 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 ||||||||| ||| ||||||||||||| |||||||| | |||||||||||||||||| Sbjct: 106327 gaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggga 106383 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 || | || | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106384 ggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 106435
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 906 bits (457), Expect = 0.0 Identities = 563/594 (94%), Gaps = 6/594 (1%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||||||||| |||||||||||| Sbjct: 132760 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaat 132702 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| || Sbjct: 132701 gcttcggggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaa 132642 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 132641 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 132583 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132582 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 132523 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 132522 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 132463 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 || || ||| |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 132462 agtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatg 132403 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132402 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 132343 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 132342 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaa 132283 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 ||||||||| ||| ||||||||||||| |||||||| | |||||||||||||||||| Sbjct: 132282 gaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggga 132226 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 || | | | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 132225 ggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactcata 132173 Score = 906 bits (457), Expect = 0.0 Identities = 563/594 (94%), Gaps = 6/594 (1%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||||||||| |||||||||||| Sbjct: 104118 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaat 104176 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| || Sbjct: 104177 gcttcggggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaa 104236 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 104237 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 104295 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104296 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 104355 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 104356 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 104415 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 || || ||| |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 104416 agtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatg 104475 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104476 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 104535 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 104536 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaa 104595 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 ||||||||| ||| ||||||||||||| |||||||| | |||||||||||||||||| Sbjct: 104596 gaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggga 104652 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 || | | | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 104653 ggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactcata 104705
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 906 bits (457), Expect = 0.0 Identities = 563/594 (94%), Gaps = 6/594 (1%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||||||||| |||||||||||| Sbjct: 132983 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaat 132925 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||| | Sbjct: 132924 gcttcggggagttgaaaataagcgtagatccggagattcccgaataggttaaccttttga 132865 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 132864 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 132806 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132805 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 132746 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| Sbjct: 132745 ctaaaccgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagc 132686 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 ||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 132685 ggtggagtgccgcaccctagatggcgagagtccagtagccgaaagcatcactagcttatg 132626 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132625 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 132566 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 132565 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaa 132506 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 ||||||||| ||| ||||||||||||| |||||||| | |||||||||||||||||| Sbjct: 132505 gaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggga 132449 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 || | || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 132448 ggag-ccctgggctctgaccgcgtgcctgttgaagaatgagccggcgactcata 132396 Score = 906 bits (457), Expect = 0.0 Identities = 563/594 (94%), Gaps = 6/594 (1%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||||||||| |||||||||||| Sbjct: 103781 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaat 103839 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||| | Sbjct: 103840 gcttcggggagttgaaaataagcgtagatccggagattcccgaataggttaaccttttga 103899 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 103900 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 103958 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103959 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 104018 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| Sbjct: 104019 ctaaaccgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagc 104078 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 ||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 104079 ggtggagtgccgcaccctagatggcgagagtccagtagccgaaagcatcactagcttatg 104138 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104139 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 104198 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 104199 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaa 104258 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 ||||||||| ||| ||||||||||||| |||||||| | |||||||||||||||||| Sbjct: 104259 gaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggga 104315 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 || | || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 104316 ggag-ccctgggctctgaccgcgtgcctgttgaagaatgagccggcgactcata 104368
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 906 bits (457), Expect = 0.0 Identities = 563/594 (94%), Gaps = 6/594 (1%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||||||||| |||||||||||| Sbjct: 132753 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaat 132695 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| || Sbjct: 132694 gcttcggggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaa 132635 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 132634 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 132576 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132575 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 132516 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 132515 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 132456 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 || || ||| |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 132455 agtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatg 132396 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132395 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 132336 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 132335 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaa 132276 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 ||||||||| ||| ||||||||||||| |||||||| | |||||||||||||||||| Sbjct: 132275 gaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggga 132219 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 || | | | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 132218 ggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactcata 132166 Score = 906 bits (457), Expect = 0.0 Identities = 563/594 (94%), Gaps = 6/594 (1%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||||||||| |||||||||||| Sbjct: 104116 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaat 104174 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| || Sbjct: 104175 gcttcggggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaa 104234 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 104235 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 104293 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104294 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 104353 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 104354 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 104413 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 || || ||| |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 104414 agtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatg 104473 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104474 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 104533 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 104534 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaa 104593 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 ||||||||| ||| ||||||||||||| |||||||| | |||||||||||||||||| Sbjct: 104594 gaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggga 104650 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 || | | | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 104651 ggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactcata 104703
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 898 bits (453), Expect = 0.0 Identities = 562/594 (94%), Gaps = 6/594 (1%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||||||||| |||||||||||| Sbjct: 131652 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaat 131594 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| || Sbjct: 131593 gcttcggggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaa 131534 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 131533 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 131475 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131474 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 131415 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 131414 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 131355 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 || || ||| |||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 131354 agtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacg 131295 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131294 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 131235 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 131234 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaa 131175 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 ||||||||| ||| ||||||||||||| |||||||| | |||||||||||||||||| Sbjct: 131174 gaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggga 131118 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 || | | | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 131117 ggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactcata 131065 Score = 898 bits (453), Expect = 0.0 Identities = 562/594 (94%), Gaps = 6/594 (1%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||||||||| |||||||||||| Sbjct: 102983 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaat 103041 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| || Sbjct: 103042 gcttcggggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaa 103101 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 103102 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 103160 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103161 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 103220 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 103221 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 103280 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 || || ||| |||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 103281 agtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacg 103340 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103341 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 103400 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 103401 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaa 103460 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 ||||||||| ||| ||||||||||||| |||||||| | |||||||||||||||||| Sbjct: 103461 gaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggga 103517 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 || | | | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 103518 ggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactcata 103570
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 898 bits (453), Expect = 0.0 Identities = 562/594 (94%), Gaps = 6/594 (1%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||||||||| |||||||||||| Sbjct: 133944 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaat 133886 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||| | Sbjct: 133885 gcttcggggagttgaaaataagcgtagatccggagattcccgaataggttaaccttttga 133826 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 133825 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 133767 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133766 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 133707 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 ||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||| Sbjct: 133706 ctaaaccgtgaaaacggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagc 133647 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 ||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 133646 ggtggagtgccgcaccctagatggcgagagtccagtagccgaaagcatcactagcttatg 133587 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133586 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 133527 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 133526 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaa 133467 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 ||||||||| ||| ||||||||||||| |||||||| | |||||||||||||||||| Sbjct: 133466 gaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggga 133410 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 || | || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 133409 ggag-ccctgggctctgaccgcgtgcctgttgaagaatgagccggcgactcata 133357 Score = 898 bits (453), Expect = 0.0 Identities = 562/594 (94%), Gaps = 6/594 (1%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||||||||| |||||||||||| Sbjct: 104705 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaat 104763 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||| | Sbjct: 104764 gcttcggggagttgaaaataagcgtagatccggagattcccgaataggttaaccttttga 104823 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 104824 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 104882 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104883 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 104942 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 ||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||| Sbjct: 104943 ctaaaccgtgaaaacggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagc 105002 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 ||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 105003 ggtggagtgccgcaccctagatggcgagagtccagtagccgaaagcatcactagcttatg 105062 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105063 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 105122 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 105123 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaa 105182 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 ||||||||| ||| ||||||||||||| |||||||| | |||||||||||||||||| Sbjct: 105183 gaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggga 105239 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 || | || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 105240 ggag-ccctgggctctgaccgcgtgcctgttgaagaatgagccggcgactcata 105292
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 890 bits (449), Expect = 0.0 Identities = 561/594 (94%), Gaps = 6/594 (1%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||||||||| |||||||||||| Sbjct: 140345 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaat 140287 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | Sbjct: 140286 gcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcga 140227 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 140226 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 140168 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140167 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 140108 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 140107 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 140048 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 || || ||| |||||||||||||| | |||||||||||||||||||||||||||||| | Sbjct: 140047 ggcggaatgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacg 139988 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139987 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 139928 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 139927 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaa 139868 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 ||||||||| ||| ||||||||||||| |||||||| | || ||||||||||||||| Sbjct: 139867 gaacccccatcggggagtgaaatagaacatgaaaccg---taagttcccaagcagtggga 139811 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 || | | | | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 139810 ggag-acgggggctctgaccgcgtgcctgttgaagaatgagccggcgactcata 139758 Score = 890 bits (449), Expect = 0.0 Identities = 561/594 (94%), Gaps = 6/594 (1%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||||||||| |||||||||||| Sbjct: 109715 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaat 109773 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | Sbjct: 109774 gcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcga 109833 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 109834 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 109892 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109893 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 109952 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 109953 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 110012 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 || || ||| |||||||||||||| | |||||||||||||||||||||||||||||| | Sbjct: 110013 ggcggaatgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacg 110072 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110073 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 110132 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 110133 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaa 110192 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 ||||||||| ||| ||||||||||||| |||||||| | || ||||||||||||||| Sbjct: 110193 gaacccccatcggggagtgaaatagaacatgaaaccg---taagttcccaagcagtggga 110249 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 || | | | | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 110250 ggag-acgggggctctgaccgcgtgcctgttgaagaatgagccggcgactcata 110302
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 890 bits (449), Expect = 0.0 Identities = 561/594 (94%), Gaps = 6/594 (1%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||||||||| |||||||||||| Sbjct: 14 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaat 72 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||| | Sbjct: 73 gcttcggggagttgaaaataagcgtagatccggagattcccgaataggttaaccttttga 132 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 133 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 191 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 ||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||| Sbjct: 252 ctaaaccgtgaaaacggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagc 311 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 ||| ||||||||||||||||||||| | |||||||||||||| ||||||||||||||||| Sbjct: 312 ggtggagtgccgcaccctagatggcgagagtccagtagccgagagcatcactagcttatg 371 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaa 491 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 ||||||||| ||| ||||||||||||| |||||||| | |||||||||||||||||| Sbjct: 492 gaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggga 548 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 || | || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 549 ggag-ccctgggctctgaccgcgtgcctgttgaagaatgagccggcgactcata 601
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 890 bits (449), Expect = 0.0 Identities = 561/594 (94%), Gaps = 6/594 (1%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||||||||| |||||||||||| Sbjct: 23 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaat 81 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| || Sbjct: 82 gcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaa 141 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 142 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 200 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 201 accagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 260 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 261 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 320 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 || |||||| |||||||||||||| | |||||||||||||||||||||||||||||| | Sbjct: 321 agtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacg 380 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 440 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 441 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaa 500 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 ||||||||| ||| ||||||||||||| |||||||| | |||||||||||||||||| Sbjct: 501 gaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggga 557 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 || | | | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 558 ggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactcata 610
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 878 bits (443), Expect = 0.0 Identities = 561/595 (94%), Gaps = 8/595 (1%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||||||||| || ||||||||| Sbjct: 136285 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaat 136227 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| | Sbjct: 136226 gcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcga 136167 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 136166 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 136108 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136107 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 136048 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 136047 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 135988 Query: 312 -ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 370 | || ||| |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 135987 agcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttat 135928 Query: 371 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135927 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 135868 Query: 431 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 490 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 135867 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaa 135808 Query: 491 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 550 |||||||||| ||| ||||||||||||| |||||||| | ||||||||||||||||| Sbjct: 135807 agaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggg 135751 Query: 551 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 ||| | || | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 135750 aggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 135698 Score = 878 bits (443), Expect = 0.0 Identities = 561/595 (94%), Gaps = 8/595 (1%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||||||||| || ||||||||| Sbjct: 106345 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaat 106403 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| | Sbjct: 106404 gcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcga 106463 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 106464 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 106522 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106523 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 106582 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 106583 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 106642 Query: 312 -ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 370 | || ||| |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 106643 agcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttat 106702 Query: 371 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106703 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 106762 Query: 431 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 490 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 106763 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaa 106822 Query: 491 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 550 |||||||||| ||| ||||||||||||| |||||||| | ||||||||||||||||| Sbjct: 106823 agaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggg 106879 Query: 551 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 ||| | || | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106880 aggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 106932
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 878 bits (443), Expect = 0.0 Identities = 561/595 (94%), Gaps = 8/595 (1%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||||||||| || ||||||||| Sbjct: 136923 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaat 136865 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| | Sbjct: 136864 gcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcga 136805 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 136804 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 136746 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136745 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 136686 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 136685 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 136626 Query: 312 ggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 370 | ||| ||| |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 136625 agcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttac 136566 Query: 371 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136565 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 136506 Query: 431 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 490 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 136505 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaa 136446 Query: 491 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 550 |||||||||| ||| ||||||||||||| |||||||| | ||||||||||||||||| Sbjct: 136445 agaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggg 136389 Query: 551 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 ||| | || | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 136388 aggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 136336 Score = 878 bits (443), Expect = 0.0 Identities = 561/595 (94%), Gaps = 8/595 (1%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||||||||| || ||||||||| Sbjct: 106634 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaat 106692 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| | Sbjct: 106693 gcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcga 106752 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 106753 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 106811 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106812 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 106871 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 106872 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 106931 Query: 312 ggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 370 | ||| ||| |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 106932 agcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttac 106991 Query: 371 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106992 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 107051 Query: 431 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 490 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 107052 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaa 107111 Query: 491 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 550 |||||||||| ||| ||||||||||||| |||||||| | ||||||||||||||||| Sbjct: 107112 agaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggg 107168 Query: 551 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 ||| | || | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 107169 aggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 107221
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 878 bits (443), Expect = 0.0 Identities = 561/595 (94%), Gaps = 8/595 (1%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||||||||| || ||||||||| Sbjct: 1539 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaat 1597 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| | Sbjct: 1598 gcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcga 1657 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1658 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 1716 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1717 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 1776 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1777 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 1836 Query: 312 -ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 370 | || ||| |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1837 agcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttat 1896 Query: 371 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1897 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 1956 Query: 431 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 490 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1957 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaa 2016 Query: 491 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 550 |||||||||| ||| ||||||||||||| |||||||| | ||||||||||||||||| Sbjct: 2017 agaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggg 2073 Query: 551 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 ||| | || | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 2074 aggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 2126
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 878 bits (443), Expect = 0.0 Identities = 561/595 (94%), Gaps = 8/595 (1%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||||||||| || ||||||||| Sbjct: 135531 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaat 135473 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| | Sbjct: 135472 gcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcga 135413 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 135412 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 135354 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135353 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 135294 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 135293 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 135234 Query: 312 ggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 370 | ||| ||| |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 135233 agcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttac 135174 Query: 371 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135173 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 135114 Query: 431 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 490 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 135113 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaa 135054 Query: 491 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 550 |||||||||| ||| ||||||||||||| |||||||| | ||||||||||||||||| Sbjct: 135053 agaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggg 134997 Query: 551 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 ||| | || | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 134996 aggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 134944 Score = 878 bits (443), Expect = 0.0 Identities = 561/595 (94%), Gaps = 8/595 (1%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||||||||| || ||||||||| Sbjct: 105505 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaat 105563 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| | Sbjct: 105564 gcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcga 105623 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 105624 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 105682 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105683 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 105742 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 105743 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 105802 Query: 312 ggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 370 | ||| ||| |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 105803 agcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttac 105862 Query: 371 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105863 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 105922 Query: 431 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 490 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 105923 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaa 105982 Query: 491 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 550 |||||||||| ||| ||||||||||||| |||||||| | ||||||||||||||||| Sbjct: 105983 agaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggg 106039 Query: 551 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 ||| | || | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106040 aggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 106092
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 878 bits (443), Expect = 0.0 Identities = 557/592 (94%), Gaps = 5/592 (0%) Strand = Plus / Plus Query: 10 agggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaa 69 ||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 14 agggcttacggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaa 72 Query: 70 atgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctttt 129 ||||||||||||| ||||||||||||||||||||||||||||| ||| ||| |||||||| Sbjct: 73 atgcttcggggagctgaaaataagcatagatccggagattcccgaatgggttaacctttt 132 Query: 130 aaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttag 189 |||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 133 gaactgc-tgctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttag 191 Query: 190 tagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagca 249 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 192 tagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagta 251 Query: 250 gcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa 309 ||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||| Sbjct: 252 gcctaaaccgtgaaaacggggttgtgggagagcaatataagtgttgtgttgctaggcgaa 311 Query: 310 gcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagctta 369 |||||||||| |||||||| |||||| | |||||||||||||||||||||||||||||| Sbjct: 312 gcggttgagtcccgcaccccagatggtgagagtccagtagccgaaagcatcactagctta 371 Query: 370 tgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacct 429 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 372 cgctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacct 431 Query: 430 tgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaa 489 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 432 tgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaa 491 Query: 490 aagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgg 549 ||||||||||| ||| ||||||||||||| |||||||| | |||||||||||||||| Sbjct: 492 aagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgg 548 Query: 550 gaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 601 |||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 549 gaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgact 600
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 878 bits (443), Expect = 0.0 Identities = 561/595 (94%), Gaps = 8/595 (1%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||||||||| || ||||||||| Sbjct: 135666 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaat 135608 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| | Sbjct: 135607 gcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcga 135548 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 135547 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 135489 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135488 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 135429 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 135428 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 135369 Query: 312 ggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 370 | ||| ||| |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 135368 agcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttac 135309 Query: 371 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135308 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 135249 Query: 431 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 490 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 135248 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaa 135189 Query: 491 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 550 |||||||||| ||| ||||||||||||| |||||||| | ||||||||||||||||| Sbjct: 135188 agaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggg 135132 Query: 551 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 ||| | || | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 135131 aggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 135079 Score = 878 bits (443), Expect = 0.0 Identities = 561/595 (94%), Gaps = 8/595 (1%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||||||||| || ||||||||| Sbjct: 105677 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaat 105735 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| | Sbjct: 105736 gcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcga 105795 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 105796 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 105854 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105855 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 105914 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 105915 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 105974 Query: 312 ggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 370 | ||| ||| |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 105975 agcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttac 106034 Query: 371 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106035 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 106094 Query: 431 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 490 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 106095 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaa 106154 Query: 491 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 550 |||||||||| ||| ||||||||||||| |||||||| | ||||||||||||||||| Sbjct: 106155 agaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggg 106211 Query: 551 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 ||| | || | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106212 aggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 106264
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 878 bits (443), Expect = 0.0 Identities = 561/595 (94%), Gaps = 8/595 (1%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||||||||| || ||||||||| Sbjct: 135664 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaat 135606 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| | Sbjct: 135605 gcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcga 135546 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 135545 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 135487 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135486 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 135427 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 135426 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 135367 Query: 312 ggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 370 | ||| ||| |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 135366 agcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttac 135307 Query: 371 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135306 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 135247 Query: 431 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 490 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 135246 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaa 135187 Query: 491 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 550 |||||||||| ||| ||||||||||||| |||||||| | ||||||||||||||||| Sbjct: 135186 agaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggg 135130 Query: 551 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 ||| | || | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 135129 aggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 135077 Score = 878 bits (443), Expect = 0.0 Identities = 561/595 (94%), Gaps = 8/595 (1%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||||||||| || ||||||||| Sbjct: 105674 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaat 105732 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| | Sbjct: 105733 gcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcga 105792 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 105793 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 105851 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105852 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 105911 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 105912 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 105971 Query: 312 ggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 370 | ||| ||| |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 105972 agcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttac 106031 Query: 371 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106032 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 106091 Query: 431 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 490 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 106092 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaa 106151 Query: 491 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 550 |||||||||| ||| ||||||||||||| |||||||| | ||||||||||||||||| Sbjct: 106152 agaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggg 106208 Query: 551 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 ||| | || | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106209 aggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 106261
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 878 bits (443), Expect = 0.0 Identities = 561/595 (94%), Gaps = 8/595 (1%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||||||||| || ||||||||| Sbjct: 135576 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaat 135518 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| | Sbjct: 135517 gcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcga 135458 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 135457 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 135399 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135398 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 135339 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 135338 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 135279 Query: 312 ggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 370 | ||| ||| |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 135278 agcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttac 135219 Query: 371 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135218 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 135159 Query: 431 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 490 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 135158 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaa 135099 Query: 491 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 550 |||||||||| ||| ||||||||||||| |||||||| | ||||||||||||||||| Sbjct: 135098 agaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggg 135042 Query: 551 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 ||| | || | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 135041 aggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 134989 Score = 878 bits (443), Expect = 0.0 Identities = 561/595 (94%), Gaps = 8/595 (1%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||||||||| || ||||||||| Sbjct: 105552 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaat 105610 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| | Sbjct: 105611 gcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcga 105670 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 105671 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 105729 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105730 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 105789 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 105790 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 105849 Query: 312 ggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 370 | ||| ||| |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 105850 agcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttac 105909 Query: 371 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105910 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 105969 Query: 431 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 490 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 105970 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaa 106029 Query: 491 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 550 |||||||||| ||| ||||||||||||| |||||||| | ||||||||||||||||| Sbjct: 106030 agaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggg 106086 Query: 551 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 ||| | || | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106087 aggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 106139
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 878 bits (443), Expect = 0.0 Identities = 561/595 (94%), Gaps = 8/595 (1%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||||||||| || ||||||||| Sbjct: 136283 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaat 136225 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| | Sbjct: 136224 gcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcga 136165 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 136164 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 136106 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136105 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 136046 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 136045 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 135986 Query: 312 -ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 370 | || ||| |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 135985 agcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttat 135926 Query: 371 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135925 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 135866 Query: 431 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 490 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 135865 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaa 135806 Query: 491 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 550 |||||||||| ||| ||||||||||||| |||||||| | ||||||||||||||||| Sbjct: 135805 agaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggg 135749 Query: 551 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 ||| | || | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 135748 aggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 135696 Score = 878 bits (443), Expect = 0.0 Identities = 561/595 (94%), Gaps = 8/595 (1%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||||||||| || ||||||||| Sbjct: 106343 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaat 106401 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| | Sbjct: 106402 gcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcga 106461 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 106462 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 106520 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106521 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 106580 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 106581 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 106640 Query: 312 -ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 370 | || ||| |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 106641 agcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttat 106700 Query: 371 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106701 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 106760 Query: 431 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 490 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 106761 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaa 106820 Query: 491 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 550 |||||||||| ||| ||||||||||||| |||||||| | ||||||||||||||||| Sbjct: 106821 agaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggg 106877 Query: 551 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 ||| | || | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106878 aggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 106930
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 874 bits (441), Expect = 0.0 Identities = 559/594 (94%), Gaps = 6/594 (1%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||||||||| |||||||||||| Sbjct: 106020 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaat 106078 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||| || Sbjct: 106079 gcttcggggagttgcaaataagcgtagatccggagattcccgaataggtcaacctttcaa 106138 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 106139 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 106197 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106198 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 106257 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 106258 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 106317 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 || ||||| |||||||||||||| | |||||||||||||||||||||||||||||| | Sbjct: 106318 agtggagtgttgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacg 106377 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106378 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 106437 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 106438 caaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaa 106497 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 ||||||||| ||| ||||||||||||| |||||||| | |||| ||||||||||||| Sbjct: 106498 gaacccccatcggggagtgaaatagaacatgaaaccg---taagcttccaagcagtggga 106554 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 || | | | | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106555 ggag-acgaggactctgaccgcgtgcctgttgaagaatgagccggcgactcata 106607 Score = 825 bits (416), Expect = 0.0 Identities = 558/597 (93%), Gaps = 9/597 (1%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||||||||| |||||||||||| Sbjct: 135889 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaat 135831 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||| || Sbjct: 135830 gcttcggggagttgcaaataagcgtagatccggagattcccgaataggtcaacctttcaa 135771 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 135770 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 135712 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135711 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 135652 Query: 252 ctaaaccgtgaaaacggggttgtgggagagc-aatacaagcgttgtgctgctaggcgaag 310 ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct: 135651 ctaaaccgtgaaaacggggttgtgggagagcaaatacaagcgtcgtgctgctaggcgaag 135592 Query: 311 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 370 | || ||||| |||||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 135591 cagtggagtgttgcaccctagatggcgagagtccagtagccgaaagcatcactagcttac 135532 Query: 371 g-ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcag-caaggaccacc 428 | | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 135531 gcccctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagccaaggaccacc 135472 Query: 429 ttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtga 488 ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 135471 ttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtga 135412 Query: 489 aaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtg 548 |||||||||||| ||| ||||||||||||| |||||||| | |||| |||||||||| Sbjct: 135411 aaagaacccccatcggggagtgaaatagaacatgaaaccg---taagcttccaagcagtg 135355 Query: 549 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 ||||| | | | | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 135354 ggaggag-acgaggactctgaccgcgtgcctgttgaagaatgagccggcgactcata 135299
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 874 bits (441), Expect = 0.0 Identities = 559/594 (94%), Gaps = 6/594 (1%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||||||||| |||||||||||| Sbjct: 136165 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaat 136107 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||| || Sbjct: 136106 gcttcggggagttgcaaataagcgtagatccggagattcccgaataggtcaacctttcaa 136047 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 136046 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 135988 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135987 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 135928 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 135927 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 135868 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 || ||||| |||||||||||||| | |||||||||||||||||||||||||||||| | Sbjct: 135867 agtggagtgttgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacg 135808 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135807 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 135748 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 135747 caaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaa 135688 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 ||||||||| ||| ||||||||||||| |||||||| | |||| ||||||||||||| Sbjct: 135687 gaacccccatcggggagtgaaatagaacatgaaaccg---taagcttccaagcagtggga 135631 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 || | | | | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 135630 ggag-acgaggactctgaccgcgtgcctgttgaagaatgagccggcgactcata 135578 Score = 874 bits (441), Expect = 0.0 Identities = 559/594 (94%), Gaps = 6/594 (1%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||||||||| |||||||||||| Sbjct: 106242 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaat 106300 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||| || Sbjct: 106301 gcttcggggagttgcaaataagcgtagatccggagattcccgaataggtcaacctttcaa 106360 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 106361 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 106419 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106420 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 106479 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 106480 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 106539 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 || ||||| |||||||||||||| | |||||||||||||||||||||||||||||| | Sbjct: 106540 agtggagtgttgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacg 106599 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106600 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 106659 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 106660 caaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaa 106719 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 ||||||||| ||| ||||||||||||| |||||||| | |||| ||||||||||||| Sbjct: 106720 gaacccccatcggggagtgaaatagaacatgaaaccg---taagcttccaagcagtggga 106776 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 || | | | | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106777 ggag-acgaggactctgaccgcgtgcctgttgaagaatgagccggcgactcata 106829
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 870 bits (439), Expect = 0.0 Identities = 560/595 (94%), Gaps = 8/595 (1%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||||||||| || ||||||||| Sbjct: 136014 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaat 135956 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||| | Sbjct: 135955 gcttcggggagttgaaaataagcatagatccggggattcccgaatagggcaacctttcga 135896 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 135895 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 135837 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135836 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 135777 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 135776 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 135717 Query: 312 -ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 370 | || ||| |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 135716 agcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttat 135657 Query: 371 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135656 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 135597 Query: 431 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 490 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 135596 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaa 135537 Query: 491 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 550 |||||||||| ||| ||||||||||||| |||||||| | ||||||||||||||||| Sbjct: 135536 agaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggg 135480 Query: 551 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 ||| | || | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 135479 aggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 135427 Score = 870 bits (439), Expect = 0.0 Identities = 560/595 (94%), Gaps = 8/595 (1%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||||||||| || ||||||||| Sbjct: 106124 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaat 106182 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||| | Sbjct: 106183 gcttcggggagttgaaaataagcatagatccggggattcccgaatagggcaacctttcga 106242 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 106243 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 106301 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106302 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 106361 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 106362 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 106421 Query: 312 -ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 370 | || ||| |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 106422 agcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttat 106481 Query: 371 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106482 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 106541 Query: 431 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 490 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 106542 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaa 106601 Query: 491 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 550 |||||||||| ||| ||||||||||||| |||||||| | ||||||||||||||||| Sbjct: 106602 agaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggg 106658 Query: 551 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 ||| | || | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106659 aggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 106711
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 870 bits (439), Expect = 0.0 Identities = 557/591 (94%), Gaps = 8/591 (1%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||||||||| || ||||||||| Sbjct: 135543 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaat 135485 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| | Sbjct: 135484 gcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcga 135425 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 135424 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 135366 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135365 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 135306 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 135305 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 135246 Query: 312 ggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 370 | ||| ||| |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 135245 agcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttac 135186 Query: 371 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135185 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 135126 Query: 431 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 490 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 135125 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaa 135066 Query: 491 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 550 |||||||||| ||| ||||||||||||| |||||||| | ||||||||||||||||| Sbjct: 135065 agaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggg 135009 Query: 551 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 601 ||| | || | |||||||||||||||||||||||||||||||||||||| Sbjct: 135008 aggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgact 134960 Score = 870 bits (439), Expect = 0.0 Identities = 557/591 (94%), Gaps = 8/591 (1%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||||||||| || ||||||||| Sbjct: 105519 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaat 105577 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| | Sbjct: 105578 gcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcga 105637 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 105638 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 105696 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105697 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 105756 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 105757 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 105816 Query: 312 ggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 370 | ||| ||| |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 105817 agcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttac 105876 Query: 371 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105877 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 105936 Query: 431 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 490 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 105937 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaa 105996 Query: 491 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 550 |||||||||| ||| ||||||||||||| |||||||| | ||||||||||||||||| Sbjct: 105997 agaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggg 106053 Query: 551 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 601 ||| | || | |||||||||||||||||||||||||||||||||||||| Sbjct: 106054 aggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgact 106102
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 868 bits (438), Expect = 0.0 Identities = 560/595 (94%), Gaps = 7/595 (1%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||||||||| |||||||||||| Sbjct: 15 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaat 73 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| || Sbjct: 74 gcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaa 133 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||| Sbjct: 134 actgc-tgctgaatccatgggcaggcaagagacaacctaacgaactgaaacatcttagta 192 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagc-ggcgagcgaaatgggagcag 250 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 193 gccagaggaaaagaaagcaaaagcgattcccgtagtagcaggcgagcgaaatgggagcag 252 Query: 251 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 310 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 253 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaag 312 Query: 311 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 370 |||| ||||||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 313 cggtgaagtgccgaaccctagatggctagagtccagtagccgaaagcatcactagcttac 372 Query: 371 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 373 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 432 Query: 431 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 490 ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct: 433 gcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaa 492 Query: 491 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 550 |||||||||| ||| ||||||||||||| |||||||| | ||||||||||||||||| Sbjct: 493 agaacccccaccggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggg 549 Query: 551 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 ||| | | | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 550 aggagcctg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactcata 603
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 858 bits (433), Expect = 0.0 Identities = 557/594 (93%), Gaps = 6/594 (1%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | ||||||||||||||| || ||||||||| Sbjct: 131776 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtattaatcgacgaaat 131718 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| | Sbjct: 131717 gcttcggggagttgaaaataagcagagatccggagattcccgaataggtcaacctttcga 131658 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||| | ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 131657 acttc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 131599 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131598 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 131539 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | Sbjct: 131538 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatc 131479 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 || |||||| | ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 131478 agtggagtgcggaaccctagatggtgaaagtccagtagccgaaagcatcactagcttatg 131419 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131418 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 131359 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 131358 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaa 131299 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 ||||||||| ||| ||||||||||||| |||||||| | ||||| |||||||||||| Sbjct: 131298 gaacccccatcggggagtgaaatagaacatgaaaccg---taagctctcaagcagtggga 131242 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||| | || | |||||||||||||||||||||||||||||||||||||||| Sbjct: 131241 gggggaccaga-ccctgaccgcgtgcctgttgaagaatgagccggcgactcata 131189 Score = 858 bits (433), Expect = 0.0 Identities = 557/594 (93%), Gaps = 6/594 (1%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | ||||||||||||||| || ||||||||| Sbjct: 101669 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtattaatcgacgaaat 101727 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| | Sbjct: 101728 gcttcggggagttgaaaataagcagagatccggagattcccgaataggtcaacctttcga 101787 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||| | ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 101788 acttc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 101846 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101847 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 101906 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | Sbjct: 101907 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatc 101966 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 || |||||| | ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 101967 agtggagtgcggaaccctagatggtgaaagtccagtagccgaaagcatcactagcttatg 102026 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102027 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 102086 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 102087 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaa 102146 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 ||||||||| ||| ||||||||||||| |||||||| | ||||| |||||||||||| Sbjct: 102147 gaacccccatcggggagtgaaatagaacatgaaaccg---taagctctcaagcagtggga 102203 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||| | || | |||||||||||||||||||||||||||||||||||||||| Sbjct: 102204 gggggaccaga-ccctgaccgcgtgcctgttgaagaatgagccggcgactcata 102256
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 854 bits (431), Expect = 0.0 Identities = 558/595 (93%), Gaps = 8/595 (1%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||||||||| |||||||||||| Sbjct: 139489 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaat 139431 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| | Sbjct: 139430 gcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcga 139371 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||||| Sbjct: 139370 actgc-tgctgaatccatgggcagacaagagacaacctggcgaactgaaacatcttagta 139312 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139311 gccggaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 139252 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| Sbjct: 139251 ctaaaccgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagc 139192 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 ||| ||||||| |||||||||||| | |||||||||||||||||||||||||||||| | Sbjct: 139191 ggtgaagtgccgaaccctagatggcgatagtccagtagccgaaagcatcactagcttacg 139132 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139131 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 139072 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 139071 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaa 139012 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 |||||||| ||| ||||||||||||| |||||||| | |||||||||||||||||| Sbjct: 139011 gaacccccgtcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggga 138955 Query: 552 gg-ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 || | || | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 138954 ggagcccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 138902 Score = 854 bits (431), Expect = 0.0 Identities = 558/595 (93%), Gaps = 8/595 (1%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||||||||| |||||||||||| Sbjct: 109608 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaat 109666 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| | Sbjct: 109667 gcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcga 109726 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||||| Sbjct: 109727 actgc-tgctgaatccatgggcagacaagagacaacctggcgaactgaaacatcttagta 109785 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109786 gccggaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 109845 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| Sbjct: 109846 ctaaaccgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagc 109905 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 ||| ||||||| |||||||||||| | |||||||||||||||||||||||||||||| | Sbjct: 109906 ggtgaagtgccgaaccctagatggcgatagtccagtagccgaaagcatcactagcttacg 109965 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109966 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 110025 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 110026 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaa 110085 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 |||||||| ||| ||||||||||||| |||||||| | |||||||||||||||||| Sbjct: 110086 gaacccccgtcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggga 110142 Query: 552 gg-ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 || | || | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 110143 ggagcccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 110195
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 850 bits (429), Expect = 0.0 Identities = 559/597 (93%), Gaps = 8/597 (1%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||||||||| |||||||||||| Sbjct: 139698 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaat 139640 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| | Sbjct: 139639 gcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcga 139580 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 139579 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 139521 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139520 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 139461 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 139460 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 139401 Query: 312 ggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 370 || || ||| ||||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 139400 agtgcgaatgctgcaccctagatggtgagagtccagtagccgaaagcatcactagcttac 139341 Query: 371 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139340 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 139281 Query: 431 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 490 |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| Sbjct: 139280 gcaaggctaaatactcctgggtgacccatagcgaagtagtaccgtgagggaagggtgaaa 139221 Query: 491 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 550 |||||||||| ||| ||||||||||||| |||||||| | ||||||||||||||||| Sbjct: 139220 agaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggg 139164 Query: 551 agggga--aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 ||| || | | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 139163 aggagactactaggactctgaccgcgtgcctgttgaagaatgagccggcgactcata 139107 Score = 850 bits (429), Expect = 0.0 Identities = 559/597 (93%), Gaps = 8/597 (1%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||||||||| |||||||||||| Sbjct: 109601 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaat 109659 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| | Sbjct: 109660 gcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcga 109719 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 109720 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 109778 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109779 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 109838 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 109839 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 109898 Query: 312 ggtt-gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 370 || || ||| ||||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 109899 agtgcgaatgctgcaccctagatggtgagagtccagtagccgaaagcatcactagcttac 109958 Query: 371 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109959 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 110018 Query: 431 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 490 |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| Sbjct: 110019 gcaaggctaaatactcctgggtgacccatagcgaagtagtaccgtgagggaagggtgaaa 110078 Query: 491 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 550 |||||||||| ||| ||||||||||||| |||||||| | ||||||||||||||||| Sbjct: 110079 agaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggg 110135 Query: 551 agggga--aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 ||| || | | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 110136 aggagactactaggactctgaccgcgtgcctgttgaagaatgagccggcgactcata 110192
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 844 bits (426), Expect = 0.0 Identities = 510/535 (95%), Gaps = 5/535 (0%) Strand = Plus / Minus Query: 19 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 78 ||||||||||||||||||||| | ||||||| |||||||| ||||||||||||||||||| Sbjct: 130513 ggtggatacctaggcacccagag-acgaggaggggcgtagtaagcgacgaaatgcttcgg 130455 Query: 79 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 138 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||| | | Sbjct: 130454 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactac-t 130396 Query: 139 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 198 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130395 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 130336 Query: 199 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130335 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 130276 Query: 259 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 318 |||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||| Sbjct: 130275 gtgaaaacggggttgtgggagagctatacaagcgtcgtgctgctaggcgaagcggtggag 130216 Query: 319 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 378 |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 130215 tgccgcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgac 130156 Query: 379 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130155 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 130096 Query: 439 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 498 ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 130095 aaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccc 130036 Query: 499 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 553 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 130035 catcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 129984 Score = 844 bits (426), Expect = 0.0 Identities = 510/535 (95%), Gaps = 5/535 (0%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 78 ||||||||||||||||||||| | ||||||| |||||||| ||||||||||||||||||| Sbjct: 101943 ggtggatacctaggcacccagag-acgaggaggggcgtagtaagcgacgaaatgcttcgg 102001 Query: 79 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 138 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||| | | Sbjct: 102002 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactac-t 102060 Query: 139 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 198 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102061 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 102120 Query: 199 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102121 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 102180 Query: 259 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 318 |||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||| Sbjct: 102181 gtgaaaacggggttgtgggagagctatacaagcgtcgtgctgctaggcgaagcggtggag 102240 Query: 319 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 378 |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 102241 tgccgcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgac 102300 Query: 379 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102301 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 102360 Query: 439 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 498 ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 102361 aaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccc 102420 Query: 499 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 553 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 102421 catcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 102472 Score = 83.8 bits (42), Expect = 6e-13 Identities = 42/42 (100%) Strand = Plus / Minus Query: 564 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 129969 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 129928 Score = 83.8 bits (42), Expect = 6e-13 Identities = 42/42 (100%) Strand = Plus / Plus Query: 564 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 102487 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 102528
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 842 bits (425), Expect = 0.0 Identities = 515/542 (95%), Gaps = 5/542 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||||||||| |||||||||||| Sbjct: 23 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaat 81 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| || Sbjct: 82 gcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaa 141 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 142 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 200 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 201 accagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 260 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 261 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 320 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 ||| |||||| |||||||||||||| | |||||||||||||||||||||||||||||| | Sbjct: 321 ggtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacg 380 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 440 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| Sbjct: 441 caaggctaaatactcctgggtgaccgatagcgaagtactaccgtgagggaagggtgaaaa 500 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 ||||||||| ||| ||||||||| ||| |||||||| | |||||||||||||||||| Sbjct: 501 gaacccccatcggggagtgaaataaaacatgaaaccg---taagctcccaagcagtggga 557 Query: 552 gg 553 || Sbjct: 558 gg 559
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 842 bits (425), Expect = 0.0 Identities = 515/542 (95%), Gaps = 5/542 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||||||||| |||||||||||| Sbjct: 23 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaat 81 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| || Sbjct: 82 gcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaa 141 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 142 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 200 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 201 accagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 260 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 261 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 320 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 ||| |||||| |||||||||||||| | |||||||||||||||||||||||||||||| | Sbjct: 321 ggtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacg 380 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 440 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| Sbjct: 441 caaggctaaatactcctgggtgaccgatagcgaagtactaccgtgagggaagggtgaaaa 500 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 ||||||||| || ||||||||||||| |||||||| | |||||||||||||||||| Sbjct: 501 gaacccccatccgggagtgaaatagaacatgaaaccg---taagctcccaagcagtggga 557 Query: 552 gg 553 || Sbjct: 558 gg 559 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 564 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||| ||||||||||||||||||| | ||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaagaattaaccggcgactcata 622
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 841 bits (424), Expect = 0.0 Identities = 549/584 (94%), Gaps = 9/584 (1%) Strand = Plus / Plus Query: 23 gatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggag 82 ||||||||||||||||| | |||||||||||||||| || |||||||||||||||||||| Sbjct: 1 gatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggag 59 Query: 83 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 142 |||||||||||||||||||||||||||||| |||||| |||||||| |||||| ||||| Sbjct: 60 ttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctg 118 Query: 143 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 202 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 178 Query: 203 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 179 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 238 Query: 263 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgc 321 ||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| Sbjct: 239 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgc 298 Query: 322 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 381 |||||| | ||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 299 tgcaccc-atatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccg 357 Query: 382 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 441 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 358 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 417 Query: 442 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 501 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 418 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 477 Query: 502 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 561 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 478 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg 534 Query: 562 atctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 535 --ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 576
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 835 bits (421), Expect = 0.0 Identities = 514/542 (94%), Gaps = 5/542 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||||||||| |||||||||||| Sbjct: 23 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaat 81 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| || Sbjct: 82 gcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaa 141 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 142 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 200 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 201 accagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 260 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 261 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 320 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 ||| |||||| |||||||||||||| | ||||||||||||||||||||| |||||||| | Sbjct: 321 ggtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatccctagcttacg 380 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 440 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| Sbjct: 441 caaggctaaatactcctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaa 500 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 ||||||||| || ||||||||||||| |||||||| | |||||||||||||||||| Sbjct: 501 gaacccccatccgggagtgaaatagaacatgaaaccg---taagctcccaagcagtggga 557 Query: 552 gg 553 || Sbjct: 558 gg 559 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 564 ctctgaccgcgtgcctgttgaagaatga 591 |||||| ||||||||||||||| ||||| Sbjct: 581 ctctgaacgcgtgcctgttgaaaaatga 608
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 835 bits (421), Expect = 0.0 Identities = 514/542 (94%), Gaps = 5/542 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||||||||| |||||||||||| Sbjct: 23 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaat 81 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| || Sbjct: 82 gcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaa 141 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 142 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 200 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 201 accagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 260 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 261 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 320 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 ||| |||||| |||||||||||||| | ||||||||||||||||||||| |||||||| | Sbjct: 321 ggtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatccctagcttacg 380 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 440 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| Sbjct: 441 caaggctaaatactcctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaa 500 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 ||||||||| ||| ||||||||| ||| |||||||| | |||||||||||||||||| Sbjct: 501 gaacccccatcggggagtgaaataaaacatgaaaccg---taagctcccaagcagtggga 557 Query: 552 gg 553 || Sbjct: 558 gg 559 Score = 44.1 bits (22), Expect = 0.53 Identities = 38/42 (90%), Gaps = 1/42 (2%) Strand = Plus / Plus Query: 564 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||| |||||||||||| || |||||||| |||||||||| Sbjct: 581 ctctgaacgcgtgcctgtttaaaaatgagcc-gcgactcata 621
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 835 bits (421), Expect = 0.0 Identities = 514/542 (94%), Gaps = 5/542 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||||||||| |||||||||||| Sbjct: 23 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaat 81 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||| || Sbjct: 82 gcttcggggggttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaa 141 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 142 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 200 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 201 accagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 260 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 261 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 320 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 ||| |||||| |||||||||||||| | ||||||||||||||||||||| |||||||| | Sbjct: 321 ggtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatccctagcttacg 380 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 440 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| Sbjct: 441 caaggctaaatactcctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaa 500 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 ||||||||| ||| ||||||||||||| |||||||| | |||||||||||||||||| Sbjct: 501 gaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggga 557 Query: 552 gg 553 || Sbjct: 558 gg 559 Score = 60.0 bits (30), Expect = 9e-06 Identities = 40/42 (95%), Gaps = 1/42 (2%) Strand = Plus / Plus Query: 564 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||| ||||||||||||||| ||||||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaa-aatgagccggcgactcata 621
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 829 bits (418), Expect = 0.0 Identities = 553/594 (93%), Gaps = 7/594 (1%) Strand = Plus / Plus Query: 10 agggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaa 69 ||||||| |||||||||||||||||||||| | |||||||||||||| | |||||||||| Sbjct: 86275 agggcttacggtggatacctaggcacccagag-acgaggaagggcgtggtaagcgacgaa 86333 Query: 70 atgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctttt 129 ||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||| ||| Sbjct: 86334 atgcttcggggagttgaaaatgagcatagatccggagattcccgaataggttaacccttt 86393 Query: 130 aaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttag 189 |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 86394 taactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttag 86452 Query: 190 tagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagca 249 |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 86453 tagccagaggaatagaaagcaaaagcgattcccgtagtagtggcgagcgaaatgggagca 86512 Query: 250 gcctaaaccgtgaaaacggggttgtgggagagc--aatacaagcgttgtgctgctaggcg 307 ||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||| Sbjct: 86513 gcctaaaccgtgaaaacggggttgtgggagagcccaatataagctctgtgctgctaggcg 86572 Query: 308 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 367 |||||||||||| | ||||||||||||| | |||||||||||||||||||||| | ||| Sbjct: 86573 aagcggttgagtcctgcaccctagatggtgagagtccagtagccgaaagcatcattggct 86632 Query: 368 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 427 || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86633 tacgctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 86692 Query: 428 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 487 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86693 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 86752 Query: 488 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 547 ||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||||| Sbjct: 86753 aaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagt 86809 Query: 548 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 601 |||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 86810 gggaggaaaattagatctctgaccgcgtgcctgttgaagaatgagccggcgact 86863
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 829 bits (418), Expect = 0.0 Identities = 508/535 (94%), Gaps = 5/535 (0%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 78 ||||||||||||||||||||| | |||| |||||||||| || |||||||||||||||| Sbjct: 46274 ggtggatacctaggcacccagag-acgaagaagggcgtattaatcgacgaaatgcttcgg 46332 Query: 79 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 138 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 46333 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-t 46391 Query: 139 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 198 |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 46392 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttactagccagag 46451 Query: 199 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 258 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 46452 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaacc 46511 Query: 259 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 318 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 46512 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggag 46571 Query: 319 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 378 | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 46572 taccgcaccctagatggctagagtccagtagccgaaagcatcactagcttatgctctgac 46631 Query: 379 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46632 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 46691 Query: 439 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 498 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 46692 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 46751 Query: 499 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 553 || ||| ||||||||||||| |||||||| | ||||| |||||||||||||| Sbjct: 46752 catcggggagtgaaatagaacatgaaaccg---taagctctcaagcagtgggagg 46803 Score = 83.8 bits (42), Expect = 6e-13 Identities = 42/42 (100%) Strand = Plus / Plus Query: 564 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 46818 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 46859
>dbj|AK060245.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G06, full insert sequence Length = 1707 Score = 829 bits (418), Expect = 0.0 Identities = 424/426 (99%) Strand = Plus / Plus Query: 86 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 145 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1 aaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaat 60 Query: 146 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 120 Query: 206 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 180 Query: 266 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 240 Query: 326 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 385 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 241 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 300 Query: 386 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 360 Query: 446 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 420 Query: 506 tagtga 511 |||||| Sbjct: 421 tagtga 426
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 829 bits (418), Expect = 0.0 Identities = 553/594 (93%), Gaps = 7/594 (1%) Strand = Plus / Plus Query: 10 agggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaa 69 ||||||| |||||||||||||||||||||| | |||||||||||||| | |||||||||| Sbjct: 88361 agggcttacggtggatacctaggcacccagag-acgaggaagggcgtggtaagcgacgaa 88419 Query: 70 atgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctttt 129 ||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||| Sbjct: 88420 atgcttcggggagttgaaaattagcatagatccggagattcccgaataggttaacctttt 88479 Query: 130 aaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttag 189 ||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 88480 tcactgc-tgctgaatccatgggcaggcaagagacaacctggtgaactgaaacatcttag 88538 Query: 190 tagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagca 249 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88539 tagccagaggaatagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagca 88598 Query: 250 gcctaaaccgtgaaaacggggttgtgggagagca--atacaagcgttgtgctgctaggcg 307 |||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||| Sbjct: 88599 gcctaaaccgtgaaaacggggttgtgggagagcacaatataagctctgtgctgctaggcg 88658 Query: 308 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 367 |||||||||||| | ||||||||||||| | |||||||||||||||||||||| | ||| Sbjct: 88659 aagcggttgagtcctgcaccctagatggtgagagtccagtagccgaaagcatcattggct 88718 Query: 368 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 427 || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88719 tacgctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 88778 Query: 428 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 487 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88779 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 88838 Query: 488 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 547 ||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||||| Sbjct: 88839 aaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagt 88895 Query: 548 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 601 |||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 88896 gggaggaaaattagatctctgaccgcgtgcctgttgaagaatgagccggcgact 88949
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 823 bits (415), Expect = 0.0 Identities = 547/587 (93%), Gaps = 7/587 (1%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 78 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 4253 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 4311 Query: 79 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 138 ||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| | Sbjct: 4312 ggagttgaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-t 4370 Query: 139 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 198 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4371 gctgaattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 4430 Query: 199 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 258 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 4431 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaacc 4490 Query: 259 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 318 ||||||||||||||||||||||||||||||||||| ||| ||||||||||||| | || Sbjct: 4491 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgttgctaggcgaagcaatcgaa 4550 Query: 319 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 378 || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4551 tgttgcaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgac 4610 Query: 379 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4611 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 4670 Query: 439 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 498 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 4671 aaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccc 4730 Query: 499 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 558 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 4731 tgtcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagctg 4787 Query: 559 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 | | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 4788 ggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 4832
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 823 bits (415), Expect = 0.0 Identities = 547/587 (93%), Gaps = 7/587 (1%) Strand = Plus / Minus Query: 19 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 78 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 23672 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 23614 Query: 79 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 138 ||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| | Sbjct: 23613 ggagttgaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-t 23555 Query: 139 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 198 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23554 gctgaattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 23495 Query: 199 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 258 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 23494 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaacc 23435 Query: 259 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 318 ||||||||||||||||||||||||||||||||||| ||| ||||||||||||| | || Sbjct: 23434 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgttgctaggcgaagcaatcgaa 23375 Query: 319 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 378 || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 23374 tgttgcaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgac 23315 Query: 379 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23314 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 23255 Query: 439 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 498 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 23254 aaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccc 23195 Query: 499 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 558 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 23194 tgtcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagctg 23138 Query: 559 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 | | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 23137 ggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 23093
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 823 bits (415), Expect = 0.0 Identities = 548/587 (93%), Gaps = 8/587 (1%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 78 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 4522 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 4580 Query: 79 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 138 ||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| | Sbjct: 4581 ggagttgaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-t 4639 Query: 139 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 198 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4640 gctgaattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 4699 Query: 199 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4700 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 4759 Query: 259 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 318 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 4760 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtcgaa 4819 Query: 319 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 378 || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4820 tgttgcaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgac 4879 Query: 379 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 438 ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 4880 ccgagtaacatggggcacgtgaaatcccgtgtgaatcagcaaggaccaccttgcaaggct 4939 Query: 439 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 498 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 4940 aaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccc 4999 Query: 499 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 558 | ||| ||||||||||||| |||||||| | ||||||||| |||||||||| | Sbjct: 5000 tggcggggagtgaaatagaacatgaaaccg---taagctcccaa-cagtgggaggagctg 5055 Query: 559 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 | | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 5056 ggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 5100
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 823 bits (415), Expect = 0.0 Identities = 548/587 (93%), Gaps = 8/587 (1%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 78 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 4522 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 4580 Query: 79 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 138 ||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| | Sbjct: 4581 ggagttgaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-t 4639 Query: 139 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 198 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4640 gctgaattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 4699 Query: 199 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4700 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 4759 Query: 259 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 318 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 4760 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtcgaa 4819 Query: 319 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 378 || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4820 tgttgcaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgac 4879 Query: 379 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 438 ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 4880 ccgagtaacatggggcacgtgaaatcccgtgtgaatcagcaaggaccaccttgcaaggct 4939 Query: 439 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 498 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 4940 aaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccc 4999 Query: 499 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 558 | ||| ||||||||||||| |||||||| | ||||||||| |||||||||| | Sbjct: 5000 tggcggggagtgaaatagaacatgaaaccg---taagctcccaa-cagtgggaggagctg 5055 Query: 559 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 | | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 5056 ggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 5100
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 817 bits (412), Expect = 0.0 Identities = 545/584 (93%), Gaps = 8/584 (1%) Strand = Plus / Minus Query: 23 gatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggag 82 ||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||| Sbjct: 142853 gatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggag 142795 Query: 83 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 142 |||||||||||| |||||||||||||||| ||| ||||||||||| |||||| ||||| Sbjct: 142794 ttgaaaataagcgcagatccggagattcccgaatgggtcaacctttcgaactgc-tgctg 142736 Query: 143 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 202 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142735 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 142676 Query: 203 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142675 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 142616 Query: 263 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg-agtgc 321 ||||||||||||||||||| |||||||||| ||||||||||||||||| | || ||||| Sbjct: 142615 aaacggggttgtgggagagtcatacaagcgtcgtgctgctaggcgaagcagctggagtgc 142556 Query: 322 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 381 ||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 142555 tgcaccctagatggtgagagtccagtagccgaaagcatcactagcttacgctctgacccg 142496 Query: 382 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 441 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 142495 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaa 142436 Query: 442 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 501 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 142435 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 142376 Query: 502 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 561 ||| ||||||||||||| |||||||| | ||||||||||||||||||| | || | Sbjct: 142375 cggggagtgaaatagaacatgaaaccg---taggctcccaagcagtgggaggagccaggg 142319 Query: 562 atctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 142318 --ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 142277 Score = 817 bits (412), Expect = 0.0 Identities = 545/584 (93%), Gaps = 8/584 (1%) Strand = Plus / Plus Query: 23 gatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggag 82 ||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||| Sbjct: 110475 gatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggag 110533 Query: 83 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 142 |||||||||||| |||||||||||||||| ||| ||||||||||| |||||| ||||| Sbjct: 110534 ttgaaaataagcgcagatccggagattcccgaatgggtcaacctttcgaactgc-tgctg 110592 Query: 143 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 202 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110593 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 110652 Query: 203 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110653 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 110712 Query: 263 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg-agtgc 321 ||||||||||||||||||| |||||||||| ||||||||||||||||| | || ||||| Sbjct: 110713 aaacggggttgtgggagagtcatacaagcgtcgtgctgctaggcgaagcagctggagtgc 110772 Query: 322 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 381 ||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 110773 tgcaccctagatggtgagagtccagtagccgaaagcatcactagcttacgctctgacccg 110832 Query: 382 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 441 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 110833 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaa 110892 Query: 442 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 501 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 110893 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 110952 Query: 502 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 561 ||| ||||||||||||| |||||||| | ||||||||||||||||||| | || | Sbjct: 110953 cggggagtgaaatagaacatgaaaccg---taggctcccaagcagtgggaggagccaggg 111009 Query: 562 atctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 111010 --ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 111051
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 817 bits (412), Expect = 0.0 Identities = 553/595 (92%), Gaps = 9/595 (1%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | ||||||||||||||| || ||||||||| Sbjct: 511 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtattaatcgacgaaat 569 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||| |||||||||||||||| |||||| |||||||| | Sbjct: 570 gcttcggggagttgaaaataagccgagatccggagattcccgaatagggcaacctttcga 629 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||| | ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 630 acttc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 688 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 689 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 748 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | Sbjct: 749 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatc 808 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 || |||||| | ||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 809 tgtggagtgcggtaccctagatggtgaaagtccagtagccgaaagcatcactagcttacg 868 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 869 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 928 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagta-ccgtgagggaaaggtgaaa 490 ||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||| Sbjct: 929 caaggctaaatactcctgggtgaccgatagccaaatagtacccgtgagggaaaggtgaaa 988 Query: 491 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 550 |||||||||| ||| ||||||||||||| |||||||| | ||||| ||||||||||| Sbjct: 989 agaacccccatcggggagtgaaatagaacatgaaaccg---taagctctcaagcagtggg 1045 Query: 551 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 ||| || || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1046 aggagacag---gctctgaccgcgtgcctgttgaagaatgagccggcgactcata 1097
>gb|AF497435.1| Gossypium hirsutum clone T1F05 unknown chloroplast sequence Length = 640 Score = 815 bits (411), Expect = 0.0 Identities = 537/574 (93%), Gaps = 8/574 (1%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 78 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 71 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 129 Query: 79 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 138 |||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 130 ggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-t 188 Query: 139 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 198 |||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 189 gctgaatccatgggcagacaagagacaacctggcgaactgaaacatcttagtagccggag 248 Query: 199 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 249 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 308 Query: 259 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 318 |||||||||||||||||||||||||||| |||||| |||||||||||||||||||| || Sbjct: 309 gtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgaag 368 Query: 319 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 378 ||||| |||||||||||| | |||||||||||||||||||||||||||||| |||||||| Sbjct: 369 tgccgaaccctagatggcgatagtccagtagccgaaagcatcactagcttacgctctgac 428 Query: 379 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 429 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 488 Query: 439 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 498 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 489 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 548 Query: 499 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-ggaa 557 | ||| ||||||||||||| |||||||| | ||||||||||||| |||||| | Sbjct: 549 cgtcggggagtgaaatagaacatgaaaccg---taagctcccaagcagngggaggagccc 605 Query: 558 agtgatctctgaccgcgtgcctgttgaagaatga 591 || | |||||||||||||||||||||||||||| Sbjct: 606 aggg--ctctgaccgcgtgcctgttgaagaatga 637
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 815 bits (411), Expect = 0.0 Identities = 553/591 (93%), Gaps = 11/591 (1%) Strand = Plus / Plus Query: 18 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 77 |||||||||||||||||||||| | |||||||||||||||| || | ||||||||||||| Sbjct: 1788 cggtggatacctaggcacccagag-acgaggaagggcgtagtaatc-acgaaatgcttcg 1845 Query: 78 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 137 ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 1846 gggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc- 1904 Query: 138 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 197 ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1905 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaccatcttagtagccaga 1964 Query: 198 ggaaaagaaagcaaaag-cgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 256 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1965 ggaaaagaaagcaaaaggcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 2024 Query: 257 ccgtgaaaacggggttgtgggagagcaatacaagc-gttgtgctgctaggcgaagc-ggt 314 ||||||||||||||||||||||||||||||||||| | ||||||||||||||||| | Sbjct: 2025 ccgtgaaaacggggttgtgggagagcaatacaagcggccgtgctgctaggcgaagcagcc 2084 Query: 315 tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 374 || ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 2085 cgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctc 2144 Query: 375 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2145 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 2204 Query: 435 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 494 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 2205 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 2264 Query: 495 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 554 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 2265 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 2321 Query: 555 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 | || | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 2322 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 2370
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 807 bits (407), Expect = 0.0 Identities = 550/594 (92%), Gaps = 8/594 (1%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | ||||||||||||||| || ||||||||| Sbjct: 23 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtattaatcgacgaaat 81 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||| |||||||||||||||| |||||| |||||||| | Sbjct: 82 gcttcggggagttgaaaataagccgagatccggagattcccgaatagggcaacctttcga 141 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||| | ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 142 acttc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 200 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 201 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 260 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | Sbjct: 261 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatc 320 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 || |||||| | ||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 321 tgtggagtgcggtaccctagatggtgaaagtccagtagccgaaagcatcactagcttacg 380 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 440 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| Sbjct: 441 caaggctaaatactcctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaa 500 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 ||||||||| ||| ||||||||| ||| |||||||| | ||||| |||||||||||| Sbjct: 501 gaacccccatcggggagtgaaataaaacatgaaaccg---taagctctcaagcagtggga 557 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 || || || |||||| ||||||||||||||| ||||||||||||||||||| Sbjct: 558 ggagacag---gctctgaacgcgtgcctgttgaaaaatgagccggcgactcata 608
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 805 bits (406), Expect = 0.0 Identities = 555/596 (93%), Gaps = 13/596 (2%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||||||||| || ||||||||| Sbjct: 115 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaat 173 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| | Sbjct: 174 gcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcga 233 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt- 190 ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 234 actgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtg 292 Query: 191 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 293 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 352 Query: 251 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 310 ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 353 cctaaaccgtgaaaacggg-ttgtgggagagcaatacaagcgtcgtgctgctaggcgaag 411 Query: 311 -cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagctta 369 || || ||| |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 412 acgcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagctta 471 Query: 370 tgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacct 429 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 472 tgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcgacaaggaccacct 531 Query: 430 tgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaa 489 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 532 tgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaa 591 Query: 490 aagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgg 549 ||||| ||||| ||| ||||||||||||| |||||||| | |||||||||||||||| Sbjct: 592 aagaa-ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgg 647 Query: 550 gaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||| | | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 648 gaggcca----gggctctgaccgcgtgcctgttgaagaatgagccggcgactcata 699
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 799 bits (403), Expect = 0.0 Identities = 550/591 (93%), Gaps = 10/591 (1%) Strand = Plus / Minus Query: 19 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 78 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 131849 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 131791 Query: 79 ggagttgaaaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcc 137 |||||||||||||||| ||||||||| ||||||| | |||||||||||||| |||||| Sbjct: 131790 ggagttgaaaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc- 131732 Query: 138 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 197 ||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 131731 tgctgaatccacgggcaggcaagagacaacctggtgaactgaaacatcttagtagccaga 131672 Query: 198 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131671 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 131612 Query: 258 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 317 ||||||||||||||||||||||||| ||||||| || ||||||||||||||||| | || Sbjct: 131611 cgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcaga 131552 Query: 318 g--tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 375 | ||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||| Sbjct: 131551 gaatgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctct 131492 Query: 376 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 435 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131491 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 131432 Query: 436 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 495 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 131431 gctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaac 131372 Query: 496 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-g 554 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 131371 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 131315 Query: 555 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 | | || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 131314 gctcggga-ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 131265 Score = 799 bits (403), Expect = 0.0 Identities = 550/591 (93%), Gaps = 10/591 (1%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 78 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 103545 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 103603 Query: 79 ggagttgaaaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcc 137 |||||||||||||||| ||||||||| ||||||| | |||||||||||||| |||||| Sbjct: 103604 ggagttgaaaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc- 103662 Query: 138 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 197 ||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 103663 tgctgaatccacgggcaggcaagagacaacctggtgaactgaaacatcttagtagccaga 103722 Query: 198 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103723 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 103782 Query: 258 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 317 ||||||||||||||||||||||||| ||||||| || ||||||||||||||||| | || Sbjct: 103783 cgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcaga 103842 Query: 318 g--tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 375 | ||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||| Sbjct: 103843 gaatgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctct 103902 Query: 376 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 435 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103903 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 103962 Query: 436 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 495 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 103963 gctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaac 104022 Query: 496 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-g 554 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 104023 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 104079 Query: 555 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 | | || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 104080 gctcggga-ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 104129
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 791 bits (399), Expect = 0.0 Identities = 550/595 (92%), Gaps = 8/595 (1%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||| |||| || ||||||||| Sbjct: 52671 ggcttacggtggatacctaggcacccagag-acgaggaaggatgtagtaatcgacgaaat 52613 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| | Sbjct: 52612 gcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaaccttttga 52553 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||||||||| Sbjct: 52552 actgc-tgctgaatccatgggcagacaagagataacctggcgaactgaaacatcttagta 52494 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 52493 gccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagc 52434 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa-g 310 |||||||| |||||||||||||||||||||||||| ||| || ||||||||||||||| | Sbjct: 52433 ctaaaccgcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgctaggcgaacg 52374 Query: 311 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 370 | |||| ||| |||||||||||||| |||||||||||||||||||||||| |||||| | Sbjct: 52373 agcttgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcattagcttgt 52314 Query: 371 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 430 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 52313 gctctgacccgagtagcatgggacacgtggaatcccgtgtgaatcagcaaggaccacctt 52254 Query: 431 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 490 |||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||| Sbjct: 52253 gcaaggctaaatactcctgggtaaccgatagttaagtagtaccgtgagggaagggtgaaa 52194 Query: 491 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 550 |||||||||| |||| ||||||||||||| |||||||| | ||||||||||||||||| Sbjct: 52193 agaacccccattggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggg 52137 Query: 551 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 ||| | || | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 52136 aggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 52084 Score = 791 bits (399), Expect = 0.0 Identities = 550/595 (92%), Gaps = 8/595 (1%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||| |||| || ||||||||| Sbjct: 37157 ggcttacggtggatacctaggcacccagag-acgaggaaggatgtagtaatcgacgaaat 37215 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| | Sbjct: 37216 gcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaaccttttga 37275 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||||||||| Sbjct: 37276 actgc-tgctgaatccatgggcagacaagagataacctggcgaactgaaacatcttagta 37334 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 37335 gccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagc 37394 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa-g 310 |||||||| |||||||||||||||||||||||||| ||| || ||||||||||||||| | Sbjct: 37395 ctaaaccgcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgctaggcgaacg 37454 Query: 311 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 370 | |||| ||| |||||||||||||| |||||||||||||||||||||||| |||||| | Sbjct: 37455 agcttgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcattagcttgt 37514 Query: 371 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 430 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 37515 gctctgacccgagtagcatgggacacgtggaatcccgtgtgaatcagcaaggaccacctt 37574 Query: 431 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 490 |||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||| Sbjct: 37575 gcaaggctaaatactcctgggtaaccgatagttaagtagtaccgtgagggaagggtgaaa 37634 Query: 491 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 550 |||||||||| |||| ||||||||||||| |||||||| | ||||||||||||||||| Sbjct: 37635 agaacccccattggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggg 37691 Query: 551 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 ||| | || | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 37692 aggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 37744
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 791 bits (399), Expect = 0.0 Identities = 547/592 (92%), Gaps = 6/592 (1%) Strand = Plus / Minus Query: 10 agggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaa 69 ||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 116196 agggcttacggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaa 116138 Query: 70 atgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctttt 129 ||||||||||||| |||||||||| |||||||||||||||||| ||||||| ||||||| Sbjct: 116137 atgcttcggggagctgaaaataagtatagatccggagattcccgaataggttaacctttg 116078 Query: 130 aaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttag 189 ||||||| |||||||| ||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 116077 aaactgc-tgctgaattcataggcagacaagagacaacctggcgaactgaaacatcttag 116019 Query: 190 tagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagca 249 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || Sbjct: 116018 tagccagaggaaaagaaagcaaaagcgattctcgtagtagcggcgagcgaaatgggaaca 115959 Query: 250 gcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa 309 |||||||||||||||||||| ||||||| |||| | | ||| |||||| ||||||||||| Sbjct: 115958 gcctaaaccgtgaaaacggg-ttgtgggggagctaaataagtgttgtgttgctaggcgaa 115900 Query: 310 gcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagctta 369 || ||||||| | ||||||||||||| ||||||||||| ||||||||| |||||||||| Sbjct: 115899 gcagttgagtcctgcaccctagatggtgaaagtccagtaaccgaaagcagcactagctta 115840 Query: 370 tgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacct 429 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115839 ggctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacct 115780 Query: 430 tgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaa 489 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115779 tgtaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaa 115720 Query: 490 aagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgg 549 ||||||||||| ||| ||||||||||||| |||||||| | |||||||||||||||| Sbjct: 115719 aagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgg 115663 Query: 550 gaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 601 |||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 115662 gaggagaattgaatctctgaccgcgtgcctgttgaagaatgagccggcgact 115611 Score = 791 bits (399), Expect = 0.0 Identities = 547/592 (92%), Gaps = 6/592 (1%) Strand = Plus / Plus Query: 10 agggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaa 69 ||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 85924 agggcttacggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaa 85982 Query: 70 atgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctttt 129 ||||||||||||| |||||||||| |||||||||||||||||| ||||||| ||||||| Sbjct: 85983 atgcttcggggagctgaaaataagtatagatccggagattcccgaataggttaacctttg 86042 Query: 130 aaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttag 189 ||||||| |||||||| ||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 86043 aaactgc-tgctgaattcataggcagacaagagacaacctggcgaactgaaacatcttag 86101 Query: 190 tagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagca 249 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || Sbjct: 86102 tagccagaggaaaagaaagcaaaagcgattctcgtagtagcggcgagcgaaatgggaaca 86161 Query: 250 gcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa 309 |||||||||||||||||||| ||||||| |||| | | ||| |||||| ||||||||||| Sbjct: 86162 gcctaaaccgtgaaaacggg-ttgtgggggagctaaataagtgttgtgttgctaggcgaa 86220 Query: 310 gcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagctta 369 || ||||||| | ||||||||||||| ||||||||||| ||||||||| |||||||||| Sbjct: 86221 gcagttgagtcctgcaccctagatggtgaaagtccagtaaccgaaagcagcactagctta 86280 Query: 370 tgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacct 429 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86281 ggctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacct 86340 Query: 430 tgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaa 489 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86341 tgtaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaa 86400 Query: 490 aagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgg 549 ||||||||||| ||| ||||||||||||| |||||||| | |||||||||||||||| Sbjct: 86401 aagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgg 86457 Query: 550 gaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 601 |||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 86458 gaggagaattgaatctctgaccgcgtgcctgttgaagaatgagccggcgact 86509
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 791 bits (399), Expect = 0.0 Identities = 550/595 (92%), Gaps = 8/595 (1%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||| |||| || ||||||||| Sbjct: 4085 ggcttacggtggatacctaggcacccagag-acgaggaaggatgtagtaatcgacgaaat 4143 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| | Sbjct: 4144 gcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaaccttttga 4203 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||||||||| Sbjct: 4204 actgc-tgctgaatccatgggcagacaagagataacctggcgaactgaaacatcttagta 4262 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 4263 gccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagc 4322 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa-g 310 |||||||| |||||||||||||||||||||||||| ||| || ||||||||||||||| | Sbjct: 4323 ctaaaccgcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgctaggcgaacg 4382 Query: 311 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 370 | |||| ||| |||||||||||||| |||||||||||||||||||||||| |||||| | Sbjct: 4383 agcttgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcattagcttgt 4442 Query: 371 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 430 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 4443 gctctgacccgagtagcatgggacacgtggaatcccgtgtgaatcagcaaggaccacctt 4502 Query: 431 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 490 |||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||| Sbjct: 4503 gcaaggctaaatactcctgggtaaccgatagttaagtagtaccgtgagggaagggtgaaa 4562 Query: 491 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 550 |||||||||| |||| ||||||||||||| |||||||| | ||||||||||||||||| Sbjct: 4563 agaacccccattggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggg 4619 Query: 551 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 ||| | || | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 4620 aggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 4672
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 789 bits (398), Expect = 0.0 Identities = 401/402 (99%) Strand = Plus / Plus Query: 204 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 263 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 60 Query: 264 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 323 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 120 Query: 324 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 383 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 121 caccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgag 180 Query: 384 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 240 Query: 444 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 503 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 300 Query: 504 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 563 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 360 Query: 564 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 402
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 785 bits (396), Expect = 0.0 Identities = 399/400 (99%) Strand = Plus / Plus Query: 206 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 266 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 326 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 385 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 386 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 446 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 506 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 360 Query: 566 ctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctgaccgcgtgcctgttgaagaatgagccggcgactcata 400
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 785 bits (396), Expect = 0.0 Identities = 399/400 (99%) Strand = Plus / Plus Query: 206 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 266 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 326 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 385 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 386 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 446 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 506 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 360 Query: 566 ctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctgaccgcgtgcctgttgaagaatgagccggcgactcata 400
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 785 bits (396), Expect = 0.0 Identities = 551/600 (91%), Gaps = 11/600 (1%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||| ||| | ||||||||||||||||||| ||||||||| Sbjct: 128431 ggcttacggtggatacctaggcactcagag-acgaggaagggcgtagcaatcgacgaaat 128373 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||| |||||| |||||||||||||||||||||| ||||||| |||||||| | Sbjct: 128372 gcttcggggagctgaaaacaagcatagatccggagattcccgaataggttaaccttttga 128313 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 128312 actgc-tgctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagta 128254 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 ||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||| ||| Sbjct: 128253 gccagaggaaaggaaagcaaacgcgattcccgtagtagcggcgagcgaagtgggagtagc 128194 Query: 252 ctaaaccgtgaaaacggggttgtgggagagc------aatacaagcgttgtgctgctagg 305 |||||||||||||||||||||||||| |||| ||||||||| ||||||||||||| Sbjct: 128193 ctaaaccgtgaaaacggggttgtgggggagcgatacaaatacaagctttgtgctgctagg 128134 Query: 306 cgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 365 |||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 128133 cgaagcggttgagtcccgcaccctagatggcaagagtccagtagccgaaagcatcactag 128074 Query: 366 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 425 || | ||||| |||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128073 ctcacgctctaacccaagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 128014 Query: 426 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaagg 485 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || Sbjct: 128013 accttgcaaggctaaatactcctgggtgaccgatagcgaagcagtaccgtgagggaaggg 127954 Query: 486 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 545 ||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||| Sbjct: 127953 tgaaaagaacccccataggggagtgaaatagaacatgaaaccg---taagctcccaagca 127897 Query: 546 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||| ||| ||||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 127896 gtgggaggagaattggatctctgaccgcatgcctgttgaggaatgagccggcgactcata 127837 Score = 785 bits (396), Expect = 0.0 Identities = 551/600 (91%), Gaps = 11/600 (1%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||| ||| | ||||||||||||||||||| ||||||||| Sbjct: 95016 ggcttacggtggatacctaggcactcagag-acgaggaagggcgtagcaatcgacgaaat 95074 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||| |||||| |||||||||||||||||||||| ||||||| |||||||| | Sbjct: 95075 gcttcggggagctgaaaacaagcatagatccggagattcccgaataggttaaccttttga 95134 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 95135 actgc-tgctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagta 95193 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 ||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||| ||| Sbjct: 95194 gccagaggaaaggaaagcaaacgcgattcccgtagtagcggcgagcgaagtgggagtagc 95253 Query: 252 ctaaaccgtgaaaacggggttgtgggagagc------aatacaagcgttgtgctgctagg 305 |||||||||||||||||||||||||| |||| ||||||||| ||||||||||||| Sbjct: 95254 ctaaaccgtgaaaacggggttgtgggggagcgatacaaatacaagctttgtgctgctagg 95313 Query: 306 cgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 365 |||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 95314 cgaagcggttgagtcccgcaccctagatggcaagagtccagtagccgaaagcatcactag 95373 Query: 366 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 425 || | ||||| |||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95374 ctcacgctctaacccaagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 95433 Query: 426 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaagg 485 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || Sbjct: 95434 accttgcaaggctaaatactcctgggtgaccgatagcgaagcagtaccgtgagggaaggg 95493 Query: 486 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 545 ||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||| Sbjct: 95494 tgaaaagaacccccataggggagtgaaatagaacatgaaaccg---taagctcccaagca 95550 Query: 546 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||| ||| ||||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 95551 gtgggaggagaattggatctctgaccgcatgcctgttgaggaatgagccggcgactcata 95610
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 783 bits (395), Expect = 0.0 Identities = 398/399 (99%) Strand = Plus / Plus Query: 207 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 Query: 267 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 Query: 327 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 386 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 180 Query: 387 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 Query: 447 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 Query: 507 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 Query: 567 tgaccgcgtgcctgttgaagaatgagccggcgactcata 605 ||||||||||||||||||||||||||||||||||||||| Sbjct: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcata 399
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 783 bits (395), Expect = 0.0 Identities = 398/399 (99%) Strand = Plus / Plus Query: 207 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 63 Query: 267 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 123 Query: 327 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 386 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 124 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 183 Query: 387 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 243 Query: 447 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 303 Query: 507 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 304 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 363 Query: 567 tgaccgcgtgcctgttgaagaatgagccggcgactcata 605 ||||||||||||||||||||||||||||||||||||||| Sbjct: 364 tgaccgcgtgcctgttgaagaatgagccggcgactcata 402
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 779 bits (393), Expect = 0.0 Identities = 396/397 (99%) Strand = Plus / Plus Query: 209 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 268 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 60 Query: 269 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 120 Query: 329 tagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagca 388 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 121 tagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagca 180 Query: 389 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 240 Query: 449 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 300 Query: 509 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 568 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 360 Query: 569 accgcgtgcctgttgaagaatgagccggcgactcata 605 ||||||||||||||||||||||||||||||||||||| Sbjct: 361 accgcgtgcctgttgaagaatgagccggcgactcata 397
>dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast genes for tRNA-Ile(GAU), tRNA-Ala(UGC), 23S rRNA, partial sequence Length = 2767 Score = 777 bits (392), Expect = 0.0 Identities = 546/593 (92%), Gaps = 6/593 (1%) Strand = Plus / Plus Query: 10 agggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaa 69 ||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 2057 agggcttatggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaa 2115 Query: 70 atgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctttt 129 ||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 2116 atgcttcggggagctgaaaataagcatagatccggagattcccgaataggttaacctttt 2175 Query: 130 aaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttag 189 |||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 2176 gaactgc-tgctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttag 2234 Query: 190 tagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagca 249 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 2235 tagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggacta 2294 Query: 250 gcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa 309 ||||||||||||||||||||||||||||||||||| | ||| ||||| ||||||||||| Sbjct: 2295 gcctaaaccgtgaaaacggggttgtgggagagcaaaataagtgttgttttgctaggcgaa 2354 Query: 310 gcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcacta-gctt 368 || ||||||| | ||||||||||||| | |||||||||||||||||||| || | || Sbjct: 2355 gcagttgagtcctgcaccctagatggtgagagtccagtagccgaaagcataacaacactc 2414 Query: 369 atgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacc 428 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2415 atgctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacc 2474 Query: 429 ttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtga 488 ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 2475 ttgtaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtga 2534 Query: 489 aaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtg 548 |||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||||| Sbjct: 2535 aaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtg 2591 Query: 549 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 601 ||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2592 ggaggagaatcgaatctctgaccgcgtgcctgttgaagaatgagccggcgact 2644
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 777 bits (392), Expect = 0.0 Identities = 546/593 (92%), Gaps = 6/593 (1%) Strand = Plus / Minus Query: 10 agggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaa 69 ||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 118136 agggcttatggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaa 118078 Query: 70 atgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctttt 129 ||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 118077 atgcttcggggagctgaaaataagcatagatccggagattcccgaataggttaacctttt 118018 Query: 130 aaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttag 189 |||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 118017 gaactgc-tgctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttag 117959 Query: 190 tagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagca 249 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 117958 tagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggacta 117899 Query: 250 gcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa 309 ||||||||||||||||||||||||||||||||||| | ||| ||||| ||||||||||| Sbjct: 117898 gcctaaaccgtgaaaacggggttgtgggagagcaaaataagtgttgttttgctaggcgaa 117839 Query: 310 gcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcacta-gctt 368 || ||||||| | ||||||||||||| | |||||||||||||||||||| || | || Sbjct: 117838 gcagttgagtcctgcaccctagatggtgagagtccagtagccgaaagcataacaacactc 117779 Query: 369 atgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacc 428 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117778 atgctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacc 117719 Query: 429 ttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtga 488 ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 117718 ttgtaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtga 117659 Query: 489 aaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtg 548 |||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||||| Sbjct: 117658 aaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtg 117602 Query: 549 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 601 ||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 117601 ggaggagaatcgaatctctgaccgcgtgcctgttgaagaatgagccggcgact 117549 Score = 777 bits (392), Expect = 0.0 Identities = 546/593 (92%), Gaps = 6/593 (1%) Strand = Plus / Plus Query: 10 agggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaa 69 ||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 89966 agggcttatggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaa 90024 Query: 70 atgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctttt 129 ||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 90025 atgcttcggggagctgaaaataagcatagatccggagattcccgaataggttaacctttt 90084 Query: 130 aaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttag 189 |||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 90085 gaactgc-tgctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttag 90143 Query: 190 tagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagca 249 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 90144 tagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggacta 90203 Query: 250 gcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa 309 ||||||||||||||||||||||||||||||||||| | ||| ||||| ||||||||||| Sbjct: 90204 gcctaaaccgtgaaaacggggttgtgggagagcaaaataagtgttgttttgctaggcgaa 90263 Query: 310 gcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcacta-gctt 368 || ||||||| | ||||||||||||| | |||||||||||||||||||| || | || Sbjct: 90264 gcagttgagtcctgcaccctagatggtgagagtccagtagccgaaagcataacaacactc 90323 Query: 369 atgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacc 428 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90324 atgctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacc 90383 Query: 429 ttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtga 488 ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 90384 ttgtaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtga 90443 Query: 489 aaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtg 548 |||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||||| Sbjct: 90444 aaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtg 90500 Query: 549 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 601 ||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 90501 ggaggagaatcgaatctctgaccgcgtgcctgttgaagaatgagccggcgact 90553
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 775 bits (391), Expect = 0.0 Identities = 544/592 (91%), Gaps = 5/592 (0%) Strand = Plus / Plus Query: 10 agggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaa 69 ||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 3903 agggcttacggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaa 3961 Query: 70 atgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctttt 129 ||||||||||||| |||||| |||||||||||||||||||||| ||||||| |||||||| Sbjct: 3962 atgcttcggggagctgaaaagaagcatagatccggagattcccgaataggttaacctttt 4021 Query: 130 aaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttag 189 |||||| |||||||| || || | |||||||||||| ||||||||||||||||||||| Sbjct: 4022 gaactgc-tgctgaattcacaagtaagcaagagacaacttggcgaactgaaacatcttag 4080 Query: 190 tagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagca 249 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 4081 tagccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagta 4140 Query: 250 gcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa 309 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| Sbjct: 4141 gcctaaaccgtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaa 4200 Query: 310 gcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagctta 369 || ||||||| | |||||| |||||| | ||||||||||||||||||| |||| |||| Sbjct: 4201 gcagttgagttctgcaccccagatggtgagagtccagtagccgaaagcaccactgtctta 4260 Query: 370 tgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacct 429 || | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4261 cactttaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacct 4320 Query: 430 tgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaa 489 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4321 tgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaa 4380 Query: 490 aagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgg 549 ||||||||||| ||| ||||||||||||| ||||| || | |||| |||||||||| Sbjct: 4381 aagaacccccatcggggagtgaaatagaacatgaaatcg---taagcttccaagcagtga 4437 Query: 550 gaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 601 |||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4438 gaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgact 4489
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 775 bits (391), Expect = 0.0 Identities = 544/592 (91%), Gaps = 5/592 (0%) Strand = Plus / Plus Query: 10 agggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaa 69 ||||||| ||||||||||||||||||||| | |||| |||||||||||||||||||||| Sbjct: 14 agggcttatggtggatacctaggcacccagag-acgaagaagggcgtagcaagcgacgaa 72 Query: 70 atgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctttt 129 ||||||||||||| ||||||||||||| ||||||||||||||| ||||||| |||||||| Sbjct: 73 atgcttcggggagctgaaaataagcatggatccggagattcccgaataggttaacctttt 132 Query: 130 aaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttag 189 |||||| |||||||| ||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 133 gaactgc-tgctgaattcataggcagacaagagacaacctggcgaactgaaacatcttag 191 Query: 190 tagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagca 249 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | Sbjct: 192 tagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagta 251 Query: 250 gcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa 309 |||||||||||||||||||||||||||| |||||| | |||||||| |||||||||| Sbjct: 252 gcctaaaccgtgaaaacggggttgtgggggagcaaagtaggcgttgtgtcgctaggcgaa 311 Query: 310 gcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagctta 369 || ||||| | | ||||| ||||||| | |||||||||||||||||||||||||| ||| Sbjct: 312 gcagttgaatcctgcaccatagatggtgagagtccagtagccgaaagcatcactagttta 371 Query: 370 tgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacct 429 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 372 tgctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacct 431 Query: 430 tgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaa 489 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 432 tgtaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaa 491 Query: 490 aagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgg 549 ||||||||||| ||| ||||||||||||| |||||||| | |||||||||||||||| Sbjct: 492 aagaacccccataggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgg 548 Query: 550 gaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 601 |||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 549 gaggagaatcgaatctctgaccgcgtgcctgttgaagaatgagccggcgact 600
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 775 bits (391), Expect = 0.0 Identities = 544/592 (91%), Gaps = 5/592 (0%) Strand = Plus / Plus Query: 10 agggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaa 69 ||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 13 agggcttacggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaa 71 Query: 70 atgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctttt 129 ||||||||||||| |||||| |||||||||||||||||||||| ||||||| |||||||| Sbjct: 72 atgcttcggggagctgaaaagaagcatagatccggagattcccgaataggttaacctttt 131 Query: 130 aaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttag 189 |||||| |||||||| || || | |||||||||||| ||||||||||||||||||||| Sbjct: 132 gaactgc-tgctgaattcacaagtaagcaagagacaacttggcgaactgaaacatcttag 190 Query: 190 tagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagca 249 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 191 tagccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagta 250 Query: 250 gcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa 309 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| Sbjct: 251 gcctaaaccgtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaa 310 Query: 310 gcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagctta 369 || ||||||| | |||||| |||||| | ||||||||||||||||||| |||| |||| Sbjct: 311 gcagttgagttctgcaccccagatggtgagagtccagtagccgaaagcaccactgtctta 370 Query: 370 tgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacct 429 || | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 371 cactttaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacct 430 Query: 430 tgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaa 489 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 431 tgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaa 490 Query: 490 aagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgg 549 ||||||||||| ||| ||||||||||||| ||||| || | |||| |||||||||| Sbjct: 491 aagaacccccatcggggagtgaaatagaacatgaaatcg---taagcttccaagcagtga 547 Query: 550 gaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 601 |||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 548 gaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgact 599
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 775 bits (391), Expect = 0.0 Identities = 544/592 (91%), Gaps = 5/592 (0%) Strand = Plus / Minus Query: 10 agggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaa 69 ||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 151232 agggcttacggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaa 151174 Query: 70 atgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctttt 129 ||||||||||||| |||||| |||||||||||||||||||||| ||||||| |||||||| Sbjct: 151173 atgcttcggggagctgaaaagaagcatagatccggagattcccgaataggttaacctttt 151114 Query: 130 aaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttag 189 |||||| |||||||| || || | |||||||||||| ||||||||||||||||||||| Sbjct: 151113 gaactgc-tgctgaattcacaagtaagcaagagacaacttggcgaactgaaacatcttag 151055 Query: 190 tagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagca 249 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 151054 tagccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagta 150995 Query: 250 gcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa 309 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| Sbjct: 150994 gcctaaaccgtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaa 150935 Query: 310 gcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagctta 369 || ||||||| | |||||| |||||| | ||||||||||||||||||| |||| |||| Sbjct: 150934 gcagttgagttctgcaccccagatggtgagagtccagtagccgaaagcaccactgtctta 150875 Query: 370 tgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacct 429 || | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150874 cactttaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacct 150815 Query: 430 tgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaa 489 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150814 tgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaa 150755 Query: 490 aagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgg 549 ||||||||||| ||| ||||||||||||| ||||| || | |||| |||||||||| Sbjct: 150754 aagaacccccatcggggagtgaaatagaacatgaaatcg---taagcttccaagcagtga 150698 Query: 550 gaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 601 |||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 150697 gaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgact 150646 Score = 775 bits (391), Expect = 0.0 Identities = 544/592 (91%), Gaps = 5/592 (0%) Strand = Plus / Plus Query: 10 agggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaa 69 ||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 117434 agggcttacggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaa 117492 Query: 70 atgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctttt 129 ||||||||||||| |||||| |||||||||||||||||||||| ||||||| |||||||| Sbjct: 117493 atgcttcggggagctgaaaagaagcatagatccggagattcccgaataggttaacctttt 117552 Query: 130 aaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttag 189 |||||| |||||||| || || | |||||||||||| ||||||||||||||||||||| Sbjct: 117553 gaactgc-tgctgaattcacaagtaagcaagagacaacttggcgaactgaaacatcttag 117611 Query: 190 tagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagca 249 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 117612 tagccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagta 117671 Query: 250 gcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa 309 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| Sbjct: 117672 gcctaaaccgtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaa 117731 Query: 310 gcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagctta 369 || ||||||| | |||||| |||||| | ||||||||||||||||||| |||| |||| Sbjct: 117732 gcagttgagttctgcaccccagatggtgagagtccagtagccgaaagcaccactgtctta 117791 Query: 370 tgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacct 429 || | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117792 cactttaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacct 117851 Query: 430 tgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaa 489 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117852 tgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaa 117911 Query: 490 aagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgg 549 ||||||||||| ||| ||||||||||||| ||||| || | |||| |||||||||| Sbjct: 117912 aagaacccccatcggggagtgaaatagaacatgaaatcg---taagcttccaagcagtga 117968 Query: 550 gaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 601 |||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 117969 gaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgact 118020
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 775 bits (391), Expect = 0.0 Identities = 544/592 (91%), Gaps = 5/592 (0%) Strand = Plus / Plus Query: 10 agggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaa 69 ||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 13 agggcttacggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaa 71 Query: 70 atgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctttt 129 ||||||||||||| |||||| |||||||||||||||||||||| ||||||| |||||||| Sbjct: 72 atgcttcggggagctgaaaagaagcatagatccggagattcccgaataggttaacctttt 131 Query: 130 aaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttag 189 |||||| |||||||| || || | |||||||||||| ||||||||||||||||||||| Sbjct: 132 gaactgc-tgctgaattcacaagtaagcaagagacaacttggcgaactgaaacatcttag 190 Query: 190 tagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagca 249 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 191 tagccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagta 250 Query: 250 gcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa 309 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| Sbjct: 251 gcctaaaccgtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaa 310 Query: 310 gcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagctta 369 || ||||||| | |||||| |||||| | ||||||||||||||||||| |||| |||| Sbjct: 311 gcagttgagttctgcaccccagatggtgagagtccagtagccgaaagcaccactgtctta 370 Query: 370 tgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacct 429 || | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 371 cactttaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacct 430 Query: 430 tgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaa 489 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 431 tgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaa 490 Query: 490 aagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgg 549 ||||||||||| ||| ||||||||||||| ||||| || | |||| |||||||||| Sbjct: 491 aagaacccccatcggggagtgaaatagaacatgaaatcg---taagcttccaagcagtga 547 Query: 550 gaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 601 |||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 548 gaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgact 599
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 773 bits (390), Expect = 0.0 Identities = 547/596 (91%), Gaps = 9/596 (1%) Strand = Plus / Plus Query: 10 agggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaa 69 ||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 14 agggcttacggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaa 72 Query: 70 atgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctttt 129 ||||||||||||| |||||||||| || ||||||||||||||| ||||||| |||||||| Sbjct: 73 atgcttcggggagctgaaaataagtatggatccggagattcccgaataggttaacctttt 132 Query: 130 aaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttag 189 ||||||| |||||||| ||| || |||||||||||||| |||||||||||||||||||| Sbjct: 133 aaactgc-tgctgaattcataggcgggcaagagacaacccggcgaactgaaacatcttag 191 Query: 190 tagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagca 249 ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 192 tagccggaggaaaagaaagcaaaagcgattctcgtagtagcggcgagcgaaatgggagcg 251 Query: 250 gcctaaaccgtgaaaacggggttgtgggagagcaatacaa----gcgttgtgctgctagg 305 |||||||||||||||||||||||||||| |||| |||||| || ||| ||||||||| Sbjct: 252 gcctaaaccgtgaaaacggggttgtgggggagctatacaaataagcattgcgctgctagg 311 Query: 306 cgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 365 |||||| ||||||| | |||||| |||||| | ||||||||| |||||||||| || | Sbjct: 312 cgaagcagttgagtcctgcaccccagatggtgagagtccagtaaccgaaagcataacaat 371 Query: 366 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 425 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 372 cttatgctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 431 Query: 426 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaagg 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 432 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaagg 491 Query: 486 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 545 ||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||| Sbjct: 492 tgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagca 548 Query: 546 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 601 |||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 549 gtgggaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgact 604
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 767 bits (387), Expect = 0.0 Identities = 511/548 (93%), Gaps = 6/548 (1%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | ||||||||||||||| || ||||||||| Sbjct: 23 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtattaatcgacgaaat 81 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||| |||||||||||||||| |||||| |||||||| | Sbjct: 82 gcttcggggagttgaaaataagccgagatccggagattcccgaatagggcaacctttcga 141 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||| | ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 142 acttc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagta 200 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 201 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 260 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | Sbjct: 261 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatc 320 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 || |||||| | ||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 321 tgtggagtgcggtaccctagatggtgaaagtccagtagccgaaagcatcactagcttacg 380 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 440 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 441 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaa 500 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 ||| ||||| ||| ||||||||| ||| |||||||| | ||||| |||||||||||| Sbjct: 501 gaa-ccccatcggggagtgaaataaaacatgaaaccg---taagctctcaagcagtggga 556 Query: 552 ggggaaag 559 || ||||| Sbjct: 557 ggagaaag 564
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 767 bits (387), Expect = 0.0 Identities = 537/584 (91%), Gaps = 5/584 (0%) Strand = Plus / Plus Query: 18 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 77 |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 5 cggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcg 63 Query: 78 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 137 ||||| |||||||||| |||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 64 gggagctgaaaataagtatagatccggagattcccgaataggttaaccttttaaactgc- 122 Query: 138 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 197 |||||||||||| || |||||||||||||||||||||||||||||||||||||||| || Sbjct: 123 tgctgaatccataggcgggcaagagacaacctggcgaactgaaacatcttagtagccgga 182 Query: 198 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 257 |||| |||||||||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 183 ggaagagaaagcaaaagcgattctcgtagtagcggcgagcgaaacgggagcagcctaaac 242 Query: 258 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 317 |||||||||||||||||||| |||| | | |||| |||| ||||||||||||| ||||| Sbjct: 243 cgtgaaaacggggttgtgggggagctaaagaagcattgtattgctaggcgaagcagttga 302 Query: 318 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 377 || | ||||||||||||| | ||||||||| |||||||||| || ||||| ||||| | Sbjct: 303 gtcctgcaccctagatggtgagagtccagtaaccgaaagcattacaagcttgggctctaa 362 Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 363 cccgagtaacatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 Query: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 Query: 498 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 557 ||| ||| ||||||||||||| |||||||| | |||| ||||||||||||||| ||| Sbjct: 483 ccatcggggagtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggagaa 539 Query: 558 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 601 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 540 tcggatctctgaccgcgtgcctgttgaagaatgagccggcgact 583
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 761 bits (384), Expect = 0.0 Identities = 544/593 (91%), Gaps = 6/593 (1%) Strand = Plus / Minus Query: 10 agggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaa 69 ||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 146546 agggcttacggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaa 146488 Query: 70 atgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctttt 129 ||||||||||||| ||||||| ||||| ||||||||||||||| ||||||| |||||||| Sbjct: 146487 atgcttcggggagctgaaaatgagcatggatccggagattcccgaataggttaacctttt 146428 Query: 130 aaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttag 189 |||| | |||||||| ||| |||||| ||||||||||||||||||||||||||||||| Sbjct: 146427 gaactac-tgctgaattcataggcaggcgagagacaacctggcgaactgaaacatcttag 146369 Query: 190 tagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagca 249 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 146368 tagccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagta 146309 Query: 250 gcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa 309 ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 146308 gcctaaaccgtgaaaacggggttgtgggagagcaatataagcgttttgctgctaggcgaa 146249 Query: 310 gcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc-tt 368 || ||||||| | | ||||||||||| | |||||||||||||||||||||||| || || Sbjct: 146248 gcagttgagtcctgtaccctagatggtgagagtccagtagccgaaagcatcactggcttt 146189 Query: 369 atgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacc 428 |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 146188 atgctccaacccgagtagcatggggcacgcagaatcccgtgtgaatcagcaaggaccacc 146129 Query: 429 ttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtga 488 ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 146128 ttgtaaggctaaatactcctgggtgaccgatagcaaagtagtaccgtgagggaaaggtga 146069 Query: 489 aaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtg 548 ||||||||||| ||| ||||||||||||| |||||||| | |||||||||||||| Sbjct: 146068 aaagaacccccgtcggggagtgaaatagaacatgaaaccg---taggctcccaagcagtg 146012 Query: 549 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 601 ||||| ||| |||| |||||||||||||||||||||||||||||||||||| Sbjct: 146011 ggaggagaatcggatccctgaccgcgtgcctgttgaagaatgagccggcgact 145959 Score = 761 bits (384), Expect = 0.0 Identities = 544/593 (91%), Gaps = 6/593 (1%) Strand = Plus / Plus Query: 10 agggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaa 69 ||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 111916 agggcttacggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaa 111974 Query: 70 atgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctttt 129 ||||||||||||| ||||||| ||||| ||||||||||||||| ||||||| |||||||| Sbjct: 111975 atgcttcggggagctgaaaatgagcatggatccggagattcccgaataggttaacctttt 112034 Query: 130 aaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttag 189 |||| | |||||||| ||| |||||| ||||||||||||||||||||||||||||||| Sbjct: 112035 gaactac-tgctgaattcataggcaggcgagagacaacctggcgaactgaaacatcttag 112093 Query: 190 tagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagca 249 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 112094 tagccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagta 112153 Query: 250 gcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa 309 ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 112154 gcctaaaccgtgaaaacggggttgtgggagagcaatataagcgttttgctgctaggcgaa 112213 Query: 310 gcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc-tt 368 || ||||||| | | ||||||||||| | |||||||||||||||||||||||| || || Sbjct: 112214 gcagttgagtcctgtaccctagatggtgagagtccagtagccgaaagcatcactggcttt 112273 Query: 369 atgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacc 428 |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 112274 atgctccaacccgagtagcatggggcacgcagaatcccgtgtgaatcagcaaggaccacc 112333 Query: 429 ttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtga 488 ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 112334 ttgtaaggctaaatactcctgggtgaccgatagcaaagtagtaccgtgagggaaaggtga 112393 Query: 489 aaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtg 548 ||||||||||| ||| ||||||||||||| |||||||| | |||||||||||||| Sbjct: 112394 aaagaacccccgtcggggagtgaaatagaacatgaaaccg---taggctcccaagcagtg 112450 Query: 549 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 601 ||||| ||| |||| |||||||||||||||||||||||||||||||||||| Sbjct: 112451 ggaggagaatcggatccctgaccgcgtgcctgttgaagaatgagccggcgact 112503
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 751 bits (379), Expect = 0.0 Identities = 551/595 (92%), Gaps = 19/595 (3%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | |||||||||||||||| |||||||||||| Sbjct: 718 ggcttacggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaat 660 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||| Sbjct: 659 gcttcggggagttgaaaataagcgtagatccggagattcccgaataggtca--ctt---g 605 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||| |||||||||||||| |||||||||||||| || |||| ||| ||||||||||| Sbjct: 604 actg-ctgctgaatccatg-gcaggcaagagaca--ct-gcga--tga-acatcttagta 553 Query: 192 gccagaggaaaagaaa-gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 250 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 552 gccagaggaaaagaaaggcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 493 Query: 251 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 310 |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 492 cctaaaccgtgaaaacggggttgtgggagagcgatacaagcgtcgtgctgctaggcgaag 433 Query: 311 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 370 |||| |||||| |||||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 432 cggtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttac 373 Query: 371 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 372 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 313 Query: 431 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 490 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 312 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaa 253 Query: 491 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 550 |||||||||| ||| ||||||||||||| |||||||| | ||||||||||||||||| Sbjct: 252 agaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggg 196 Query: 551 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 ||| | | | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 195 aggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactcata 142
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 745 bits (376), Expect = 0.0 Identities = 456/478 (95%), Gaps = 5/478 (1%) Strand = Plus / Plus Query: 22 ggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgggga 81 |||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||| Sbjct: 22 ggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgggga 80 Query: 82 gttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 141 ||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| |||| Sbjct: 81 gttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgct 139 Query: 142 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 201 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140 gaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 199 Query: 202 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtg 261 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 200 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtg 259 Query: 262 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 321 |||||||||||||||||||||||||||||||| |||||||||||||||||||| || | | Sbjct: 260 aaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggaatac 319 Query: 322 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 381 |||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 320 tgcaccctagatggcgatagtccagtagccgaaagcatcactagcttacgctctgacccg 379 Query: 382 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 441 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 439 Query: 442 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 499 |||| | |||||||||||| |||||||||||||||||||| |||| ||||||||||| Sbjct: 440 tactac--ggtgaccgatagtgaagtagtaccgtgagggaagggtg-aaagaaccccc 494
>gb|DQ166037.1| Passiflora edulis 23S ribosomal RNA gene, partial sequence; chloroplast Length = 467 Score = 741 bits (374), Expect = 0.0 Identities = 447/469 (95%), Gaps = 2/469 (0%) Strand = Plus / Plus Query: 21 tggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgggg 80 ||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||| Sbjct: 1 tggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgggg 59 Query: 81 agttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgc 140 |||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||| Sbjct: 60 agttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgc 118 Query: 141 tgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagga 200 ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 119 cgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagagga 178 Query: 201 aaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 260 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 179 aaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 238 Query: 261 gaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtg 320 ||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 239 gaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggccgaaca 298 Query: 321 ccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc 380 ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| Sbjct: 299 ccgcaccctagatggtgggagtccagtagccgaaagcatcactagcttacgctctgaccc 358 Query: 381 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 440 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 359 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 418 Query: 441 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaa 489 |||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 419 atactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaa 467
>emb|AJ538655.1|NTA538655 Nicotiana tabacum cDNA-AFLP-fragment BC34-M2-001 Length = 512 Score = 737 bits (372), Expect = 0.0 Identities = 475/505 (94%), Gaps = 7/505 (1%) Strand = Plus / Minus Query: 102 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 161 ||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 512 cggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 454 Query: 162 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 221 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 394 Query: 222 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 281 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 393 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 334 Query: 282 caatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaa 340 |||||||||||| ||||||||||||||||| | || ||| |||||||||||||| ||| Sbjct: 333 caatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaa 274 Query: 341 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 400 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 273 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 214 Query: 401 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 460 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 213 aatcccgtgtgaatcagcaaggaccgccttgcaaggctaaatactcctgggtgaccgata 154 Query: 461 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 520 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 153 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 94 Query: 521 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 580 |||||||| | |||||||||||||||||||| | || | ||||||||||||||||| Sbjct: 93 tgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctg 39 Query: 581 ttgaagaatgagccggcgactcata 605 ||||||||||||||||||||||||| Sbjct: 38 ttgaagaatgagccggcgactcata 14
>emb|AJ538560.1|NTA538560 Nicotiana tabacum cDNA-AFLP-fragment BC3-M22-001 Length = 501 Score = 724 bits (365), Expect = 0.0 Identities = 446/470 (94%), Gaps = 6/470 (1%) Strand = Plus / Plus Query: 137 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 196 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 76 Query: 197 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 136 Query: 257 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt- 315 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 137 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagccc 196 Query: 316 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 375 || ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 197 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctct 256 Query: 376 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 435 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 316 Query: 436 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 495 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 317 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 376 Query: 496 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 555 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 377 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 433 Query: 556 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 || | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 434 ccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 481
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 710 bits (358), Expect = 0.0 Identities = 385/393 (97%), Gaps = 1/393 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||||||||||||||||||| |||||| | | ||||||||||||||||||||||||||| Sbjct: 123455 ggcttgcggtggatacctaggtacccagag-atgaggaagggcgtagcaagcgacgaaat 123397 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 123396 gcttcggggagttgaaattaagcatagatccggagattcccaaataggtcaaccttttga 123337 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123336 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 123277 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123276 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 123217 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123216 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 123157 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 123156 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacg 123097 Query: 372 ctctgacccgagtagcatggggcacgtggaatc 404 ||||| ||||||||||||||||||||||||||| Sbjct: 123096 ctctgccccgagtagcatggggcacgtggaatc 123064 Score = 408 bits (206), Expect = e-111 Identities = 209/210 (99%) Strand = Plus / Minus Query: 396 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 455 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122820 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 122761 Query: 456 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 515 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122760 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 122701 Query: 516 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 575 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122700 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 122641 Query: 576 gcctgttgaagaatgagccggcgactcata 605 ||||||||||||||||||||| |||||||| Sbjct: 122640 gcctgttgaagaatgagccggtgactcata 122611
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 710 bits (358), Expect = 0.0 Identities = 385/393 (97%), Gaps = 1/393 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||||||||||||||||||| |||||| | | ||||||||||||||||||||||||||| Sbjct: 12825996 ggcttgcggtggatacctaggtacccagag-atgaggaagggcgtagcaagcgacgaaat 12825938 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 12825937 gcttcggggagttgaaattaagcatagatccggagattcccaaataggtcaaccttttga 12825878 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825877 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 12825818 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825817 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 12825758 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825757 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 12825698 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 12825697 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacg 12825638 Query: 372 ctctgacccgagtagcatggggcacgtggaatc 404 ||||| ||||||||||||||||||||||||||| Sbjct: 12825637 ctctgccccgagtagcatggggcacgtggaatc 12825605 Score = 408 bits (206), Expect = e-111 Identities = 209/210 (99%) Strand = Plus / Minus Query: 396 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 455 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825361 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 12825302 Query: 456 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 515 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825301 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 12825242 Query: 516 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 575 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825241 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 12825182 Query: 576 gcctgttgaagaatgagccggcgactcata 605 ||||||||||||||||||||| |||||||| Sbjct: 12825181 gcctgttgaagaatgagccggtgactcata 12825152 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 341 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 400 ||||||||||||||||||||||||||||||||||||| || |||||||||| ||| |||| Sbjct: 16021783 gtccagtagccgaaagcatcactagcttatgctctgaaccaagtagcatggcgcatgtgg 16021842
>dbj|AK107856.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-B02, full insert sequence Length = 998 Score = 710 bits (358), Expect = 0.0 Identities = 364/366 (99%) Strand = Plus / Plus Query: 95 atagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagca 154 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 atagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagca 60 Query: 155 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 214 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 120 Query: 215 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 274 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 180 Query: 275 gggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 334 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 240 Query: 335 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 394 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 241 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 300 Query: 395 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 454 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 360 Query: 455 ccgata 460 |||||| Sbjct: 361 ccgata 366
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 680 bits (343), Expect = 0.0 Identities = 537/595 (90%), Gaps = 9/595 (1%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| |||||||||||||||||||||| | ||||||||||| |||| || ||||||||| Sbjct: 15 ggcttacggtggatacctaggcacccagag-acgaggaagggtgtagtaatcgacgaaat 73 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||| |||||||| ||| || ||||||| | Sbjct: 74 gcttcggggagttgaaaataagcatagatccgtagattcccgaatggggtaacctttcac 133 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||| |||| |||||||| ||||| |||||||||||||||||||||||||||||||||| Sbjct: 134 actgc-tgctcaatccatgggcaggaaagagacaacctggcgaactgaaacatcttagta 192 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||| Sbjct: 193 gccagaggaaaataaagcaaaagcgattcccatagtagcggcgagcgaaatgggatcagc 252 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||| Sbjct: 253 ctaaaccgcgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagc 312 Query: 312 -ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 370 | || | || |||||||||||||| |||||||||||| | |||||||||||| || Sbjct: 313 agcttaaatgatgcaccctagatggcgaaagtccagtagtcaaaagcatcactacgttgc 372 Query: 371 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 430 |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 373 gctctgacccgagtagcatgggacacgtgtaatcccgtgtgaatcagcaaggaccacctt 432 Query: 431 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 490 |||||||||||||||||||||| ||| |||| ||||||||||||||||||| ||||||| Sbjct: 433 gcaaggctaaatactcctgggtaaccaatagtaaagtagtaccgtgagggaagggtgaaa 492 Query: 491 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 550 |||| ||||| |||| ||||||||||||| |||||||| | |||| |||||||||||| Sbjct: 493 agaa-ccccattggggagtgaaatagaacatgaaaccg---taagctaccaagcagtggg 548 Query: 551 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 ||| | || | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 549 aggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 601
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 668 bits (337), Expect = 0.0 Identities = 376/390 (96%), Gaps = 13/390 (3%) Strand = Plus / Minus Query: 221 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 280 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75478 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 75419 Query: 281 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 340 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75418 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 75359 Query: 341 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 400 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 75358 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 75299 Query: 401 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 455 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 75298 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 75239 Query: 456 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 515 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75238 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 75179 Query: 516 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 575 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 75178 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 75127 Query: 576 gcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||| Sbjct: 75126 gcctgttgaagaatgagccggcgactcata 75097 Score = 394 bits (199), Expect = e-106 Identities = 211/214 (98%), Gaps = 1/214 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 75697 ggcttgcggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaat 75639 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 75638 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 75579 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75578 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 75519 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgta 225 |||||||||||||||||||||||||||||||||| Sbjct: 75518 gccagaggaaaagaaagcaaaagcgattcccgta 75485 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 152 gcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 430381 gcaggcaagagacaacctagcgaactgaaacatcttagta 430342 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 452 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 498 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 400814 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 400860
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 668 bits (337), Expect = 0.0 Identities = 376/390 (96%), Gaps = 13/390 (3%) Strand = Plus / Plus Query: 221 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 280 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382060 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 382119 Query: 281 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 340 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382120 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 382179 Query: 341 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 400 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 382180 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 382239 Query: 401 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 455 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 382240 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 382299 Query: 456 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 515 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382300 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 382359 Query: 516 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 575 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 382360 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 382411 Query: 576 gcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||| Sbjct: 382412 gcctgttgaagaatgagccggcgactcata 382441 Score = 394 bits (199), Expect = e-106 Identities = 211/214 (98%), Gaps = 1/214 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 381841 ggcttgcggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaat 381899 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 381900 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 381959 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381960 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 382019 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgta 225 |||||||||||||||||||||||||||||||||| Sbjct: 382020 gccagaggaaaagaaagcaaaagcgattcccgta 382053 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 152 gcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 254042 gcaggcaagagacaacctagcgaactgaaacatcttagta 254081 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 152 gcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 125350 gcaggcaagagacaacctagcgaactgaaacatcttagta 125389 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 452 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 498 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 283605 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 283559 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 452 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 498 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 154913 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 154867
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 668 bits (337), Expect = 0.0 Identities = 376/390 (96%), Gaps = 13/390 (3%) Strand = Plus / Minus Query: 221 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 280 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113569 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 113510 Query: 281 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 340 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113509 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 113450 Query: 341 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 400 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 113449 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 113390 Query: 401 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 455 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 113389 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 113330 Query: 456 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 515 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113329 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 113270 Query: 516 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 575 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 113269 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 113218 Query: 576 gcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||| Sbjct: 113217 gcctgttgaagaatgagccggcgactcata 113188 Score = 394 bits (199), Expect = e-106 Identities = 211/214 (98%), Gaps = 1/214 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 113788 ggcttgcggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaat 113730 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 113729 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 113670 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113669 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 113610 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgta 225 |||||||||||||||||||||||||||||||||| Sbjct: 113609 gccagaggaaaagaaagcaaaagcgattcccgta 113576 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 152 gcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 323068 gcaggcaagagacaacctagcgaactgaaacatcttagta 323029 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 452 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 498 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 293448 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 293494
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 668 bits (337), Expect = 0.0 Identities = 376/390 (96%), Gaps = 13/390 (3%) Strand = Plus / Minus Query: 221 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 280 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368251 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 368192 Query: 281 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 340 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368191 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 368132 Query: 341 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 400 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 368131 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 368072 Query: 401 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 455 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 368071 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 368012 Query: 456 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 515 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368011 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 367952 Query: 516 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 575 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 367951 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 367900 Query: 576 gcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||| Sbjct: 367899 gcctgttgaagaatgagccggcgactcata 367870 Score = 668 bits (337), Expect = 0.0 Identities = 376/390 (96%), Gaps = 13/390 (3%) Strand = Plus / Minus Query: 221 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 280 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184856 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 184797 Query: 281 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 340 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184796 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 184737 Query: 341 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 400 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 184736 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 184677 Query: 401 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 455 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 184676 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 184617 Query: 456 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 515 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184616 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 184557 Query: 516 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 575 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 184556 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 184505 Query: 576 gcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||| Sbjct: 184504 gcctgttgaagaatgagccggcgactcata 184475 Score = 394 bits (199), Expect = e-106 Identities = 211/214 (98%), Gaps = 1/214 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 368470 ggcttgcggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaat 368412 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 368411 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 368352 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368351 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 368292 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgta 225 |||||||||||||||||||||||||||||||||| Sbjct: 368291 gccagaggaaaagaaagcaaaagcgattcccgta 368258 Score = 394 bits (199), Expect = e-106 Identities = 211/214 (98%), Gaps = 1/214 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 185075 ggcttgcggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaat 185017 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 185016 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 184957 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184956 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 184897 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgta 225 |||||||||||||||||||||||||||||||||| Sbjct: 184896 gccagaggaaaagaaagcaaaagcgattcccgta 184863 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 152 gcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 295897 gcaggcaagagacaacctagcgaactgaaacatcttagta 295858 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 452 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 498 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 266283 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 266329
>gb|DQ160037.1| Taraxacum officinale To27-3 mRNA, partial sequence Length = 336 Score = 563 bits (284), Expect = e-157 Identities = 321/332 (96%), Gaps = 1/332 (0%) Strand = Plus / Minus Query: 122 aaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaa 181 ||||||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 335 aacctttcaaactgc-tgctgaatccatgggcaggcaggagacaacctggcgaactgaaa 277 Query: 182 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 276 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 217 Query: 242 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 216 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgc 157 Query: 302 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 361 |||||||||| || || ||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 156 taggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 97 Query: 362 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 421 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 37 Query: 422 gaccaccttgcaaggctaaatactcctgggtg 453 |||||||||||||||||||||||||||||||| Sbjct: 36 gaccaccttgcaaggctaaatactcctgggtg 5
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 549 bits (277), Expect = e-153 Identities = 513/590 (86%), Gaps = 4/590 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 |||||||||||||||||||||||||||| | |||| ||||||||| |||| ||||||||| Sbjct: 143934 ggcttgcggtggatacctaggcacccagag-acgaagaagggcgtggcaaacgacgaaat 143992 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||| ||||||| | |||||||||||||||||| ||||||| |||||| || Sbjct: 143993 gcttcggggagccgaaaataggtatagatccggagattcccgaataggttaaccttccaa 144052 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||| || ||||| |||||||||||| |||||||||||||||||||||| Sbjct: 144053 actgcctgctgaattcagaagcagacaagagacaacccggcgaactgaaacatcttagta 144112 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 ||| ||||| | |||||||||||||||||| ||||| ||||||| |||| |||| ||| Sbjct: 144113 gccggaggaggaaaaagcaaaagcgattcccctagtaacggcgagtgaaacgggaagagc 144172 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||| ||||||||||||||||| || || | || | ||||||||||| Sbjct: 144173 ctaaaccgtgaagacggggttgtgggagagtgatgagggcttcgttttactaggcgaagc 144232 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 ||||||||| |||||| |||||| | ||||||||||||| ||| | |||||| | | Sbjct: 144233 agttgagtgctgcaccccagatggtgatagtccagtagccggaagtacagctagctcacg 144292 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 ||| |||| |||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 144293 ctccaacccaagtagcatggggcacgcaaaatcccgtgtgaatcagcgaggaccaccttg 144352 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 ||||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||| Sbjct: 144353 taaggctaaatattcctgagtgaccgatagcgaagcagtaccgtgagggaaaggtgaaaa 144412 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 |||||||| ||| ||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 144413 gaacccccgtcggggagtgaaatagaacatgaaaccg---cgagctcccaagcagtggga 144469 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 601 || ||| | ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 144470 ggagaatgagatctctaaccgcgtgcctgttgaagaatgagccggcgact 144519 Score = 549 bits (277), Expect = e-153 Identities = 513/590 (86%), Gaps = 4/590 (0%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 |||||||||||||||||||||||||||| | |||| ||||||||| |||| ||||||||| Sbjct: 88917 ggcttgcggtggatacctaggcacccagag-acgaagaagggcgtggcaaacgacgaaat 88859 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 ||||||||||| ||||||| | |||||||||||||||||| ||||||| |||||| || Sbjct: 88858 gcttcggggagccgaaaataggtatagatccggagattcccgaataggttaaccttccaa 88799 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||| || ||||| |||||||||||| |||||||||||||||||||||| Sbjct: 88798 actgcctgctgaattcagaagcagacaagagacaacccggcgaactgaaacatcttagta 88739 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 ||| ||||| | |||||||||||||||||| ||||| ||||||| |||| |||| ||| Sbjct: 88738 gccggaggaggaaaaagcaaaagcgattcccctagtaacggcgagtgaaacgggaagagc 88679 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 311 |||||||||||| ||||||||||||||||| || || | || | ||||||||||| Sbjct: 88678 ctaaaccgtgaagacggggttgtgggagagtgatgagggcttcgttttactaggcgaagc 88619 Query: 312 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 371 ||||||||| |||||| |||||| | ||||||||||||| ||| | |||||| | | Sbjct: 88618 agttgagtgctgcaccccagatggtgatagtccagtagccggaagtacagctagctcacg 88559 Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 ||| |||| |||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 88558 ctccaacccaagtagcatggggcacgcaaaatcccgtgtgaatcagcgaggaccaccttg 88499 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 ||||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||| Sbjct: 88498 taaggctaaatattcctgagtgaccgatagcgaagcagtaccgtgagggaaaggtgaaaa 88439 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 |||||||| ||| ||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 88438 gaacccccgtcggggagtgaaatagaacatgaaaccg---cgagctcccaagcagtggga 88382 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 601 || ||| | ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 88381 ggagaatgagatctctaaccgcgtgcctgttgaagaatgagccggcgact 88332
>gb|M37149.1|SOYCPRTG Soybean chloroplast 16S rRNA (3' end), 18S rRNA (5' end), Ile-tRNA, and Ala-tRNA genes Length = 3022 Score = 545 bits (275), Expect = e-152 Identities = 377/405 (93%), Gaps = 6/405 (1%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 78 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 2621 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 2679 Query: 79 ggagttgaaaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcc 137 |||||||||||||||| ||||||||| ||||||| | |||||||||||||| |||||| Sbjct: 2680 ggagttgaaaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc- 2738 Query: 138 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 197 ||||||||||| | |||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 2739 tgctgaatccacgggcaggcaagagacaacttggtgaactgaaacatcttagtagccaga 2798 Query: 198 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2799 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 2858 Query: 258 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 317 ||||||||||||||||||||||||| ||||||| || ||||||||||||||||| | || Sbjct: 2859 cgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcaga 2918 Query: 318 g--tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 375 | ||| |||||||||||||| | |||||||||||||||||||||||| ||||| ||||| Sbjct: 2919 gaatgctgcaccctagatggcgagagtccagtagccgaaagcatcact-gcttacgctct 2977 Query: 376 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 420 |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 2978 gacccgagtagcatagggcacgtggaatcccgtgtgaatcagcaa 3022
>gb|M21402.1|SOYRDNASPA Soybean chloroplast 16S/23S ribosomal intergenic spacer DNA Length = 1277 Score = 545 bits (275), Expect = e-152 Identities = 377/405 (93%), Gaps = 6/405 (1%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 78 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 876 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 934 Query: 79 ggagttgaaaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcc 137 |||||||||||||||| ||||||||| ||||||| | |||||||||||||| |||||| Sbjct: 935 ggagttgaaaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc- 993 Query: 138 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 197 ||||||||||| | |||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 994 tgctgaatccacgggcaggcaagagacaacttggtgaactgaaacatcttagtagccaga 1053 Query: 198 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1054 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 1113 Query: 258 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 317 ||||||||||||||||||||||||| ||||||| || ||||||||||||||||| | || Sbjct: 1114 cgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcaga 1173 Query: 318 g--tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 375 | ||| |||||||||||||| | |||||||||||||||||||||||| ||||| ||||| Sbjct: 1174 gaatgctgcaccctagatggcgagagtccagtagccgaaagcatcact-gcttacgctct 1232 Query: 376 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 420 |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1233 gacccgagtagcatagggcacgtggaatcccgtgtgaatcagcaa 1277
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 529 bits (267), Expect = e-147 Identities = 270/271 (99%) Strand = Plus / Plus Query: 335 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 394 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 60 Query: 395 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 454 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 120 Query: 455 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 514 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 180 Query: 515 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 574 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 240 Query: 575 tgcctgttgaagaatgagccggcgactcata 605 ||||||||||||||||||||||||||||||| Sbjct: 241 tgcctgttgaagaatgagccggcgactcata 271
>dbj|AK104484.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H11, full insert sequence Length = 1091 Score = 521 bits (263), Expect = e-145 Identities = 278/282 (98%), Gaps = 1/282 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| Sbjct: 13 ggcttgcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaat 71 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 131 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 293 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 293
>dbj|AK060870.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H08, full insert sequence Length = 1091 Score = 521 bits (263), Expect = e-145 Identities = 278/282 (98%), Gaps = 1/282 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| Sbjct: 13 ggcttgcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaat 71 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 131 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 251 Query: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 293 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 252 ctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 293
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 482 bits (243), Expect = e-133 Identities = 335/362 (92%), Gaps = 3/362 (0%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 78 ||||||||||||||||||||| | | |||||||||||||| || |||||||||||||||| Sbjct: 177053 ggtggatacctaggcacccagag-aggaggaagggcgtagtaatcgacgaaatgcttcgg 177111 Query: 79 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 138 |||||||||||| ||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 177112 ggagttgaaaatcagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 177170 Query: 139 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 198 |||||||||||| |||||||||||| |||| |||||||||||| |||||||||||||||| Sbjct: 177171 gctgaatccatgggcaggcaagagagaaccaggcgaactgaaagatcttagtagccagag 177230 Query: 199 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 258 |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 177231 gaaaagaaagcaaaagcgattcccgtagtagcggcgggcgaaatgggagctgcctaaacc 177290 Query: 259 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 317 ||||||||||||||||||||||||||||||||||| |||| |||||||||||| | || Sbjct: 177291 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgcagctaggcgaagcagcccga 177350 Query: 318 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 377 ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 177351 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttaggctctga 177410 Query: 378 cc 379 || Sbjct: 177411 cc 177412 Score = 83.8 bits (42), Expect = 6e-13 Identities = 42/42 (100%) Strand = Plus / Plus Query: 564 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 177405 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 177446 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 452 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 497 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 418398 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 418443 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 452 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 497 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 67648 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 67693 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 171 gcgaactgaaacatcttagtagc 193 ||||||||||||||||||||||| Sbjct: 417776 gcgaactgaaacatcttagtagc 417798 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 171 gcgaactgaaacatcttagtagc 193 ||||||||||||||||||||||| Sbjct: 67026 gcgaactgaaacatcttagtagc 67048
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 458 bits (231), Expect = e-125 Identities = 510/598 (85%), Gaps = 19/598 (3%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| ||||||||||||||||||||| | |||||||||||||||||| ||||| ||| Sbjct: 139254 ggcttacggtggatacctaggcacccaaag-acgaggaagggcgtagcaggcgac--aat 139198 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||| || | |||||||||||||||||||| ||| ||| ||| |||| || | Sbjct: 139197 gcttcgggaagccagagataagcatagatccggagatccccgaatgggttaaccccttga 139138 Query: 132 actgcctgctgaatccatgagcagg----caagagacaacctggcgaactgaaacatctt 187 |||||| ||||||||| | || |||||||| ||| ||||||| |||||||| Sbjct: 139137 actgcc----gaatccatgggatgggcggcaagagacgacccggcgaaccgaaacatcca 139082 Query: 188 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 247 | ||||| | |||| |||| |||||||||||||||| |||||||||||||||| ||||| Sbjct: 139081 aatagccgggggaagagaaggcaaaagcgattcccgcagtagcggcgagcgaagagggag 139022 Query: 248 cagcctaaaccgtgaaaacggggttgtgggagagcaatac----aagcgttgtgctgcta 303 ||||||||||||| ||||||||||||||||||| ||| ||| ||||||||| || Sbjct: 139021 tagcctaaaccgtgggaacggggttgtgggagagcgataagtataag-gttgtgctgtta 138963 Query: 304 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 363 || |||||||| |||| ||||| || ||| || || ||||| ||||||| ||||| ||| Sbjct: 138962 ggtgaagcggtcgagtcccgcatcccagacggttagagtccggtagccggaagcagcaca 138903 Query: 364 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 423 ||||| ||||||||||||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 138902 ggcttacgctctgacccgagtagcatggggcacgtggaatcccgtgcgaatcagcgagga 138843 Query: 424 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 483 |||||| | ||||||||||||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 138842 ccacctcgtaaggctaaatacttctgggtgaccgatagcgaaatagtaccgtgagggaaa 138783 Query: 484 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 543 ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||| || Sbjct: 138782 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccgag 138726 Query: 544 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 601 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 138725 cagtgggaggagaattggatctctgaccgcgtgcctgttgaagaatgagccggcgact 138668 Score = 458 bits (231), Expect = e-125 Identities = 510/598 (85%), Gaps = 19/598 (3%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||| ||||||||||||||||||||| | |||||||||||||||||| ||||| ||| Sbjct: 82623 ggcttacggtggatacctaggcacccaaag-acgaggaagggcgtagcaggcgac--aat 82679 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||| || | |||||||||||||||||||| ||| ||| ||| |||| || | Sbjct: 82680 gcttcgggaagccagagataagcatagatccggagatccccgaatgggttaaccccttga 82739 Query: 132 actgcctgctgaatccatgagcagg----caagagacaacctggcgaactgaaacatctt 187 |||||| ||||||||| | || |||||||| ||| ||||||| |||||||| Sbjct: 82740 actgcc----gaatccatgggatgggcggcaagagacgacccggcgaaccgaaacatcca 82795 Query: 188 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 247 | ||||| | |||| |||| |||||||||||||||| |||||||||||||||| ||||| Sbjct: 82796 aatagccgggggaagagaaggcaaaagcgattcccgcagtagcggcgagcgaagagggag 82855 Query: 248 cagcctaaaccgtgaaaacggggttgtgggagagcaatac----aagcgttgtgctgcta 303 ||||||||||||| ||||||||||||||||||| ||| ||| ||||||||| || Sbjct: 82856 tagcctaaaccgtgggaacggggttgtgggagagcgataagtataag-gttgtgctgtta 82914 Query: 304 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 363 || |||||||| |||| ||||| || ||| || || ||||| ||||||| ||||| ||| Sbjct: 82915 ggtgaagcggtcgagtcccgcatcccagacggttagagtccggtagccggaagcagcaca 82974 Query: 364 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 423 ||||| ||||||||||||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 82975 ggcttacgctctgacccgagtagcatggggcacgtggaatcccgtgcgaatcagcgagga 83034 Query: 424 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 483 |||||| | ||||||||||||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 83035 ccacctcgtaaggctaaatacttctgggtgaccgatagcgaaatagtaccgtgagggaaa 83094 Query: 484 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 543 ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||| || Sbjct: 83095 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccgag 83151 Query: 544 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 601 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 83152 cagtgggaggagaattggatctctgaccgcgtgcctgttgaagaatgagccggcgact 83209
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 430 bits (217), Expect = e-117 Identities = 220/221 (99%) Strand = Plus / Plus Query: 385 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 60 Query: 445 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 120 Query: 505 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 564 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gtagtgaaataggacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 180 Query: 565 tctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tctgaccgcgtgcctgttgaagaatgagccggcgactcata 221
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 410 bits (207), Expect = e-111 Identities = 292/319 (91%), Gaps = 1/319 (0%) Strand = Plus / Minus Query: 117 aggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaac 176 |||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||| ||| Sbjct: 3695 aggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcaaac 3637 Query: 177 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 236 ||||| |||||||||||||||||||||||||||||||| ||||||||||||| || |||| Sbjct: 3636 tgaaatatcttagtagccagaggaaaagaaagcaaaagtgattcccgtagtaacgacgag 3577 Query: 237 cgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgt 296 ||||||||||||||||||||||| |||| | ||||||||||||||||| ||| ||| || Sbjct: 3576 tgaaatgggagcagcctaaaccgtaaaaatgaggttgtgggagagcaatgcaaacgtagt 3517 Query: 297 gctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaag 356 || ||||||| ||||||| ||||| |||||||||||||| | ||| |||||||||||| Sbjct: 3516 gccgctaggcaaagcggtggagtgttgcaccctagatggcgagagtttagtagccgaaag 3457 Query: 357 catcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatca 416 |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 3456 catccctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatta 3397 Query: 417 gcaaggaccaccttgcaag 435 ||||||||||||||||||| Sbjct: 3396 gcaaggaccaccttgcaag 3378 Score = 95.6 bits (48), Expect = 2e-16 Identities = 75/84 (89%) Strand = Plus / Minus Query: 444 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 503 ||||||| ||||| |||| |||||||||||||||||||| ||||||||||||||||| | Sbjct: 3365 ctcctggctgacctatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 3306 Query: 504 ggtagtgaaatagaacgtgaaacc 527 || |||||||||||| ||||||| Sbjct: 3305 gggagtgaaatagaagatgaaacc 3282 Score = 87.7 bits (44), Expect = 4e-14 Identities = 83/95 (87%), Gaps = 1/95 (1%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 |||| |||||||||||||| |||||||| | |||||||||||| ||| ||||||||||| Sbjct: 3787 ggctggcggtggatacctatgcacccagag-acgaggaagggcatagttagcgacgaaat 3729 Query: 72 gcttcggggagttgaaaataagcatagatccggag 106 ||||| | |||||| |||||||| |||||| |||| Sbjct: 3728 gcttcagagagttgcaaataagcgtagatcaggag 3694 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 564 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 3249 ctctgaccgcgtacctattgaagaatgagccgacgactcata 3208
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 408 bits (206), Expect = e-111 Identities = 307/340 (90%), Gaps = 3/340 (0%) Strand = Plus / Minus Query: 262 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 321 ||||||||||||||||||||||||| |||||||||| |||||| ||||| ||||||| | Sbjct: 6284 aaaacggggttgtgggagagcaatataagcgttgtgtcgctaggtgaagcagttgagtcc 6225 Query: 322 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 381 ||||||||||||| | |||||||||| ||||||| || | ||||| ||||| ||||| Sbjct: 6224 tgcaccctagatggtgagagtccagtagtcgaaagcggcattggcttacgctctaacccg 6165 Query: 382 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 441 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6164 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 6105 Query: 442 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 501 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 6104 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccctat 6045 Query: 502 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 561 ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| | Sbjct: 6044 cggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaatgga 5988 Query: 562 atctctgaccgcgtgcctgttgaagaatgagccggcgact 601 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 5987 atctctgaccgcgtgccttttgaagaatgagccggcgact 5948 Score = 262 bits (132), Expect = 1e-66 Identities = 185/200 (92%), Gaps = 2/200 (1%) Strand = Plus / Minus Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 ||||||||||||||||||||||||| || | |||||||||||||||||||| ||||||| Sbjct: 6512 agcgacgaaatgcttcggggagttgtaattc-gcatagatccggagattcccgaataggt 6454 Query: 121 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 180 |||||||| |||||| ||||||||||||| ||||| ||| | |||||||| |||||||| Sbjct: 6453 taaccttttgaactgc-tgctgaatccatgggcaggtaaggggcaacctggtgaactgaa 6395 Query: 181 acatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaa 240 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 6394 acatcttagtaaccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaa 6335 Query: 241 atgggagcagcctaaaccgt 260 |||||||||||||||||||| Sbjct: 6334 atgggagcagcctaaaccgt 6315
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 406 bits (205), Expect = e-110 Identities = 205/205 (100%) Strand = Plus / Plus Query: 401 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 460 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 60 Query: 461 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 520 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 120 Query: 521 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 580 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 180 Query: 581 ttgaagaatgagccggcgactcata 605 ||||||||||||||||||||||||| Sbjct: 181 ttgaagaatgagccggcgactcata 205
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 Score = 406 bits (205), Expect = e-110 Identities = 217/220 (98%), Gaps = 1/220 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 75781 ggcttgcggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaat 75839 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75840 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 75899 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 191 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75900 actgcctgcggaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 75959 Query: 192 gccagaggaaaagaaagcaaaagcgattcccgtagtagcg 231 |||||||||||||||||||||||||||||||||||||||| Sbjct: 75960 gccagaggaaaagaaagcaaaagcgattcccgtagtagcg 75999 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 452 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 498 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 374093 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 374047 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 452 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 498 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 262355 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 262309 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 ggcgaactgaaacatcttag 189 |||||||||||||||||||| Sbjct: 320856 ggcgaactgaaacatcttag 320837
>gb|DQ460110.1| Nicotiana tabacum cDNA-AFLP fragment H-N_BC3M12-1 sequence Length = 249 Score = 404 bits (204), Expect = e-109 Identities = 238/248 (95%), Gaps = 1/248 (0%) Strand = Plus / Plus Query: 214 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 273 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1 gcgattcccgtagtagcggcgagcgaaatgggagcagcctagaccgtgaaaacggggttg 60 Query: 274 tgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctaga 332 |||||||||||||||||||| ||||||||||||||||| | || ||| |||||||||| Sbjct: 61 tgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctaga 120 Query: 333 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 392 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 Query: 393 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 452 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgctaggctaaatactcctgggt 240 Query: 453 gaccgata 460 |||||||| Sbjct: 241 gaccgata 248
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 402 bits (203), Expect = e-109 Identities = 246/258 (95%), Gaps = 2/258 (0%) Strand = Plus / Minus Query: 19 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 78 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 79748 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 79690 Query: 79 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 138 ||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| | Sbjct: 79689 ggagttgaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-t 79631 Query: 139 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 198 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79630 gctgaattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 79571 Query: 199 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 258 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 79570 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaacc 79511 Query: 259 gtgaaaacggggttgtgg 276 |||||||||||||||||| Sbjct: 79510 gtgaaaacggggttgtgg 79493
>gb|DQ160136.1| Taraxacum officinale To110-2 mRNA, partial sequence Length = 282 Score = 392 bits (198), Expect = e-106 Identities = 252/268 (94%), Gaps = 4/268 (1%) Strand = Plus / Plus Query: 338 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 397 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3 aaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacg 62 Query: 398 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 457 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 122 Query: 458 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 517 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 123 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 182 Query: 518 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 577 || |||||||| | |||||||||||||||||||||| | | |||||||||||||| Sbjct: 183 acatgaaaccg---taagctcccaagcagtgggaggggcccg-gggctctgaccgcgtgc 238 Query: 578 ctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||| Sbjct: 239 ctgttgaagaatgagccggcgactcata 266
>emb|AJ538583.1|NTA538583 Nicotiana tabacum cDNA-AFLP-fragment BC3-M31-041 Length = 226 Score = 355 bits (179), Expect = 1e-94 Identities = 200/207 (96%) Strand = Plus / Plus Query: 323 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 382 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10 gcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccga 69 Query: 383 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 442 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 70 gtagcatggggcacgtggaatcccgtgtgaatcaacaaggaccaccttgcaaggctaaat 129 Query: 443 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 502 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 130 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 189 Query: 503 gggtagtgaaatagaacgtgaaaccgt 529 ||| ||||||||||||| ||||||||| Sbjct: 190 ggggagtgaaatagaacatgaaaccgt 216
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 349 bits (176), Expect = 7e-93 Identities = 494/589 (83%), Gaps = 16/589 (2%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 78 ||||||||||||||||||||| | | || ||||||| || || || ||||||||| || Sbjct: 21 ggtggatacctaggcacccaggg-atgaagaagggcataataattgatgaaatgctttgg 79 Query: 79 ggagttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcc 137 |||||| |||| ||| ||||||||||||||||||| ||||||| ||||||| |||||| Sbjct: 80 ggagttaaaaaataaacatagatccggagattcccgaataggtaaaccttt--aactgc- 136 Query: 138 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 197 |||| | |||||| |||| ||||||| ||||||| ||||||||||||||||||||||||| Sbjct: 137 tgcttattccatg-gcagacaagaga-aacctggtgaactgaaacatcttagtagccaga 194 Query: 198 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 257 |||||| |||||||||| |||||| |||||| ||| | |||| |||| ||||||||| Sbjct: 195 ggaaaataaagcaaaagttattcccatagtagtggcaaatgaaaagggaacagcctaaat 254 Query: 258 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 317 || |||| ||||||| || ||||||| ||| || || |||||| || || || || Sbjct: 255 cgctaaaatggggttgggg---agcaataaaagtattttgttgctagacggagtagtgga 311 Query: 318 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 377 || | | ||||||||||| | |||||||||| |||| |||| ||||||||||| | | Sbjct: 312 gttctgaaccctagatggtgagagtccagtagtataaagtatcattagcttatgctttta 371 Query: 378 -cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 436 ||||||||||||||| || |||||||||||||||||||||||||||||||||| |||| Sbjct: 372 acccgagtagcatgggacatatggaatcccgtgtgaatcagcaaggaccaccttgaaagg 431 Query: 437 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 496 |||||||||| ||||||||| |||| |||||||||||||||||||| ||||||||||||| Sbjct: 432 ctaaatactcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaacc 491 Query: 497 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 556 |||| |||| |||||| |||||| ||||| | | ||| ||||||||||||||| || Sbjct: 492 cccattggggagtgaactagaacatgaaaac---atatgctaccaagcagtgggaggaga 548 Query: 557 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 || | |||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 549 caggg--ctctgaccacgtgcccgttgaagaatgagtcggcgactcata 595
>dbj|AK059621.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-H01, full insert sequence Length = 1729 Score = 301 bits (152), Expect = 1e-78 Identities = 167/171 (97%), Gaps = 1/171 (0%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaat 71 ||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| Sbjct: 1560 ggcttgcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaat 1618 Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1619 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttga 1678 Query: 132 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 182 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1679 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 1729
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 293 bits (148), Expect = 3e-76 Identities = 226/251 (90%), Gaps = 1/251 (0%) Strand = Plus / Plus Query: 10 agggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaa 69 ||||||| ||||||||||||||||||||| | |||| |||||||||||||||||||||| Sbjct: 14 agggcttatggtggatacctaggcacccagag-acgaagaagggcgtagcaagcgacgaa 72 Query: 70 atgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctttt 129 ||||||||||||| ||| || |||||| ||||||||||| ||| |||||| ||||| || Sbjct: 73 atgcttcggggagctgagaacaagcattgatccggagatgcccgaataggggaacctatt 132 Query: 130 aaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttag 189 |||||||||||||| || | |||||||||||||||||||||||||||||||||||| Sbjct: 133 tgactgcctgctgaattgatagggaggcaagagacaacctggcgaactgaaacatcttag 192 Query: 190 tagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagca 249 ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| || Sbjct: 193 tagccagaggaaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatgggaaca 252 Query: 250 gcctaaaccgt 260 ||||||||||| Sbjct: 253 gcctaaaccgt 263 Score = 291 bits (147), Expect = 1e-75 Identities = 206/225 (91%), Gaps = 3/225 (1%) Strand = Plus / Plus Query: 377 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 436 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 391 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 450 Query: 437 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 496 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 451 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 510 Query: 497 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 556 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| || Sbjct: 511 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 567 Query: 557 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 601 | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 568 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgact 612
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 291 bits (147), Expect = 1e-75 Identities = 206/225 (91%), Gaps = 3/225 (1%) Strand = Plus / Plus Query: 377 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 436 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 378 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 437 Query: 437 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 496 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 438 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 497 Query: 497 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 556 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| || Sbjct: 498 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 554 Query: 557 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 601 | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 555 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgact 599 Score = 280 bits (141), Expect = 5e-72 Identities = 217/242 (89%), Gaps = 1/242 (0%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 78 || ||| |||||||||||||| | |||| ||||||||||||||||||||||||||||||| Sbjct: 10 ggyggagacctaggcacccagag-acgaagaagggcgtagcaagcgacgaaatgcttcgg 68 Query: 79 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 138 |||| ||| || |||||| ||||||||||| ||| |||||| ||||| || ||||||| Sbjct: 69 ggagctgagaacaagcattgatccggagatgcccgaataggggaacctatttgactgcct 128 Query: 139 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 198 ||||||| || | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129 gctgaattgatagggaggcaagagacaacctggcgaactgaaacatcttagtagccagag 188 Query: 199 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 258 |||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||| Sbjct: 189 gaaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatgggaacagcctaaacc 248 Query: 259 gt 260 || Sbjct: 249 gt 250
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 289 bits (146), Expect = 5e-75 Identities = 205/224 (91%), Gaps = 3/224 (1%) Strand = Plus / Plus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 496 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 555 Query: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 497 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 556 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 615 Query: 498 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 557 ||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| Sbjct: 616 ccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaa 672 Query: 558 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 601 | |||||||||||||||||||||||||||||||||||||||| Sbjct: 673 tggaatctctgaccgcgtgcctgttgaagaatgagccggcgact 716 Score = 283 bits (143), Expect = 3e-73 Identities = 224/250 (89%), Gaps = 1/250 (0%) Strand = Plus / Plus Query: 10 agggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaa 69 ||||||| ||||||||||||||||||||| | |||| |||||||||||||||||||||| Sbjct: 118 agggcttatggtggatacctaggcacccagag-acgaagaagggcgtagcaagcgacgaa 176 Query: 70 atgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctttt 129 |||||||||| || ||| || |||||| ||||||||||| ||| |||||| ||||| || Sbjct: 177 atgcttcgggaagctgagaacaagcattgatccggagatgcccgaataggggaacctatt 236 Query: 130 aaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttag 189 |||||||||||||| || | |||||||||||||||||||||||||||||||||||| Sbjct: 237 tgactgcctgctgaattgatagggaggcaagagacaacctggcgaactgaaacatcttag 296 Query: 190 tagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagca 249 ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| || Sbjct: 297 tagccagaggaaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatgggaaca 356 Query: 250 gcctaaaccg 259 |||||||||| Sbjct: 357 gcctaaaccg 366
>gb|AC137922.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0046A04, complete sequence Length = 141001 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 331 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 389 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 95252 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 95311 Query: 390 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 449 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 95312 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 95371 Query: 450 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 509 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 95372 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 95431 Query: 510 gaaatagaacgtgaaaccgtgctgagctcc 539 |||||||||||||||||||||||||||||| Sbjct: 95432 gaaatagaacgtgaaaccgtgctgagctcc 95461
>gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007C02, complete sequence Length = 148265 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Minus Query: 331 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 389 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 937 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 878 Query: 390 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 449 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 877 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 818 Query: 450 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 509 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 817 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 758 Query: 510 gaaatagaacgtgaaaccgtgctgagctcc 539 |||||||||||||||||||||||||||||| Sbjct: 757 gaaatagaacgtgaaaccgtgctgagctcc 728
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 331 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 389 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11893525 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11893584 Query: 390 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 449 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11893585 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11893644 Query: 450 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 509 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11893645 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11893704 Query: 510 gaaatagaacgtgaaaccgtgctgagctcc 539 |||||||||||||||||||||||||||||| Sbjct: 11893705 gaaatagaacgtgaaaccgtgctgagctcc 11893734 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 532 tgagctcccaagcagtgggaggggaaagtgatc 564 |||||||||||| |||||||| ||||||||||| Sbjct: 9056543 tgagctcccaagtagtgggagaggaaagtgatc 9056575
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 289 bits (146), Expect = 5e-75 Identities = 242/273 (88%), Gaps = 1/273 (0%) Strand = Plus / Plus Query: 10 agggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaa 69 ||||||| |||||||||||||||||||||| | |||| ||||||||| | |||||||||| Sbjct: 14 agggcttacggtggatacctaggcacccagag-acgaagaagggcgtggtaagcgacgaa 72 Query: 70 atgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctttt 129 ||||||||||||| || || ||||||||||||| ||| ||| |||||| |||||| || Sbjct: 73 atgcttcggggagctgcgaacaagcatagatccgaagacccccgaatagggcaacctctt 132 Query: 130 aaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttag 189 ||| | |||||||||||| ||| | |||||| ||||||||||||||||||||||||| Sbjct: 133 gtactacttgctgaatccataggcaagaaagagataacctggcgaactgaaacatcttag 192 Query: 190 tagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagca 249 ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| || Sbjct: 193 tagccagaggaaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacgggatca 252 Query: 250 gcctaaaccgtgaaaacggggttgtgggagagc 282 |||||||||| |||| ||||||||||||||||| Sbjct: 253 gcctaaaccgcgaaagcggggttgtgggagagc 285 Score = 264 bits (133), Expect = 3e-67 Identities = 261/303 (86%), Gaps = 3/303 (0%) Strand = Plus / Plus Query: 299 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 358 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 302 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 361 Query: 359 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 418 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 362 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 421 Query: 419 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 478 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 422 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 481 Query: 479 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 538 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 482 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 538 Query: 539 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 598 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 539 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 598 Query: 599 act 601 ||| Sbjct: 599 act 601
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 331 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 389 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11971932 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11971991 Query: 390 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 449 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11971992 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11972051 Query: 450 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 509 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11972052 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11972111 Query: 510 gaaatagaacgtgaaaccgtgctgagctcc 539 |||||||||||||||||||||||||||||| Sbjct: 11972112 gaaatagaacgtgaaaccgtgctgagctcc 11972141 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 532 tgagctcccaagcagtgggaggggaaagtgatc 564 |||||||||||| |||||||| ||||||||||| Sbjct: 9128240 tgagctcccaagtagtgggagaggaaagtgatc 9128272
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 289 bits (146), Expect = 5e-75 Identities = 242/273 (88%), Gaps = 1/273 (0%) Strand = Plus / Minus Query: 10 agggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaa 69 ||||||| |||||||||||||||||||||| | |||| ||||||||| | |||||||||| Sbjct: 125251 agggcttacggtggatacctaggcacccagag-acgaagaagggcgtggtaagcgacgaa 125193 Query: 70 atgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctttt 129 ||||||||||||| || || ||||||||||||| ||| ||| |||||| |||||| || Sbjct: 125192 atgcttcggggagctgcgaacaagcatagatccgaagacccccgaatagggcaacctctt 125133 Query: 130 aaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttag 189 ||| | |||||||||||| ||| | |||||| ||||||||||||||||||||||||| Sbjct: 125132 gtactacttgctgaatccataggcaagaaagagataacctggcgaactgaaacatcttag 125073 Query: 190 tagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagca 249 ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| || Sbjct: 125072 tagccagaggaaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacgggatca 125013 Query: 250 gcctaaaccgtgaaaacggggttgtgggagagc 282 |||||||||| |||| ||||||||||||||||| Sbjct: 125012 gcctaaaccgcgaaagcggggttgtgggagagc 124980 Score = 289 bits (146), Expect = 5e-75 Identities = 242/273 (88%), Gaps = 1/273 (0%) Strand = Plus / Plus Query: 10 agggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaa 69 ||||||| |||||||||||||||||||||| | |||| ||||||||| | |||||||||| Sbjct: 94615 agggcttacggtggatacctaggcacccagag-acgaagaagggcgtggtaagcgacgaa 94673 Query: 70 atgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctttt 129 ||||||||||||| || || ||||||||||||| ||| ||| |||||| |||||| || Sbjct: 94674 atgcttcggggagctgcgaacaagcatagatccgaagacccccgaatagggcaacctctt 94733 Query: 130 aaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttag 189 ||| | |||||||||||| ||| | |||||| ||||||||||||||||||||||||| Sbjct: 94734 gtactacttgctgaatccataggcaagaaagagataacctggcgaactgaaacatcttag 94793 Query: 190 tagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagca 249 ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| || Sbjct: 94794 tagccagaggaaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacgggatca 94853 Query: 250 gcctaaaccgtgaaaacggggttgtgggagagc 282 |||||||||| |||| ||||||||||||||||| Sbjct: 94854 gcctaaaccgcgaaagcggggttgtgggagagc 94886 Score = 264 bits (133), Expect = 3e-67 Identities = 261/303 (86%), Gaps = 3/303 (0%) Strand = Plus / Minus Query: 299 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 358 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 124963 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 124904 Query: 359 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 418 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 124903 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 124844 Query: 419 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 478 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 124843 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 124784 Query: 479 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 538 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 124783 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 124727 Query: 539 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 598 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 124726 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 124667 Query: 599 act 601 ||| Sbjct: 124666 act 124664 Score = 264 bits (133), Expect = 3e-67 Identities = 261/303 (86%), Gaps = 3/303 (0%) Strand = Plus / Plus Query: 299 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 358 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 94903 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 94962 Query: 359 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 418 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 94963 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 95022 Query: 419 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 478 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 95023 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 95082 Query: 479 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 538 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 95083 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 95139 Query: 539 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 598 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 95140 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 95199 Query: 599 act 601 ||| Sbjct: 95200 act 95202
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 285 bits (144), Expect = 8e-74 Identities = 227/253 (89%), Gaps = 5/253 (1%) Strand = Plus / Plus Query: 353 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 412 |||| |||| ||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 373 aaagtatcattagcttatgctttgacccgagtagcatgggacacgtggaatcccgtgtga 432 Query: 413 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 472 |||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||| Sbjct: 433 atcagcaaggaccaccttgcaaggctaaatactcttgggtgaccaatagtgaagtagtac 492 Query: 473 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 532 | |||||||| ||||||||||||||| | |||| ||||||||||||| ||||| | | Sbjct: 493 catgagggaagggtgaaaagaacccctattggggagtgaaatagaacatgaaaac---at 549 Query: 533 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 592 |||| ||||||||||||||| | || | ||||||||||||||||||||||||||||| Sbjct: 550 aagctaccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgag 607 Query: 593 ccggcgactcata 605 ||||||||||||| Sbjct: 608 ccggcgactcata 620 Score = 133 bits (67), Expect = 7e-28 Identities = 154/181 (85%), Gaps = 4/181 (2%) Strand = Plus / Plus Query: 152 gcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaa 211 |||| ||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 149 gcagacaagaga-aacctggtgaactgaaacatcttagtagccagaggaaaataaagcaa 207 Query: 212 aagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggt 271 ||| |||||| |||||| ||||||||||| |||| |||||||||||| |||| ||||| Sbjct: 208 aagttattcccatagtagtggcgagcgaaaagggaacagcctaaaccgctaaaatggggt 267 Query: 272 tgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctag 331 | || |||||||| ||| ||||| |||||| |||||| || |||| | | ||||||| Sbjct: 268 t---ggggagcaataaaagtattgtgttgctagacgaagcagtggagttctgaaccctag 324 Query: 332 a 332 | Sbjct: 325 a 325
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 276 bits (139), Expect = 8e-71 Identities = 204/225 (90%), Gaps = 3/225 (1%) Strand = Plus / Plus Query: 377 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 436 |||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||| Sbjct: 337 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagg 396 Query: 437 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 496 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 397 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 456 Query: 497 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 556 ||| ||| ||||||||||||| |||||||| | ||| |||||||||||||| || Sbjct: 457 cccgtaggggagtgaaatagaacatgaaaccg---taagcctacaagcagtgggaggaga 513 Query: 557 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 601 | |||||||||||||||||||||||||||||||||||||||| Sbjct: 514 atagaatctctgaccgcgtgcctgttgaagaatgagccggcgact 558 Score = 184 bits (93), Expect = 2e-43 Identities = 185/212 (87%), Gaps = 4/212 (1%) Strand = Plus / Plus Query: 48 gaagggcgtagcaagcgacgaaatgct-tcggggagttgaaaataagcatagatccggag 106 |||||||||| |||||||||||||||| |||| |||| || |||| || ||||||||| Sbjct: 7 gaagggcgtaacaagcgacgaaatgctctcggagagtcgagaataggct--gatccggag 64 Query: 107 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 166 || ||| |||||| ||||| |||||||| |||||||| || |||| | ||||| || Sbjct: 65 atccccgaatagggtaacctaataaactgc-tgctgaatatataggcagacgagagataa 123 Query: 167 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 124 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctcag 183 Query: 227 tagcggcgagcgaaatgggagcagcctaaacc 258 ||| |||||||||||||||| ||||||||||| Sbjct: 184 tagtggcgagcgaaatgggaacagcctaaacc 215
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 274 bits (138), Expect = 3e-70 Identities = 141/142 (99%) Strand = Plus / Minus Query: 43 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 102 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19434061 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 19434002 Query: 103 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 162 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 19434001 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 19433942 Query: 163 acaacctggcgaactgaaacat 184 |||||||||||||||||||||| Sbjct: 19433941 acaacctggcgaactgaaacat 19433920 Score = 83.8 bits (42), Expect = 6e-13 Identities = 42/42 (100%) Strand = Plus / Minus Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 593 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 12182494 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 12182453 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 470 taccgtgagggaaaggtgaaaagaacc 496 |||||||||||||||||||||| |||| Sbjct: 14553517 taccgtgagggaaaggtgaaaataacc 14553543
>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476H10 Length = 151703 Score = 274 bits (138), Expect = 3e-70 Identities = 141/142 (99%) Strand = Plus / Minus Query: 43 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 102 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51588 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 51529 Query: 103 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 162 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 51528 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 51469 Query: 163 acaacctggcgaactgaaacat 184 |||||||||||||||||||||| Sbjct: 51468 acaacctggcgaactgaaacat 51447
>dbj|AP004879.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0475F05 Length = 147522 Score = 274 bits (138), Expect = 3e-70 Identities = 141/142 (99%) Strand = Plus / Minus Query: 43 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 102 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119552 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 119493 Query: 103 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 162 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119492 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 119433 Query: 163 acaacctggcgaactgaaacat 184 |||||||||||||||||||||| Sbjct: 119432 acaacctggcgaactgaaacat 119411
>emb|AJ535053.1|OSA535053 Oryza sativa (japonica cultivar-group) pdr2 gene for PDR-like ABC transporter, exons 1-22 Length = 15112 Score = 274 bits (138), Expect = 3e-70 Identities = 141/142 (99%) Strand = Plus / Plus Query: 43 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 102 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6070 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 6129 Query: 103 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 162 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 6130 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 6189 Query: 163 acaacctggcgaactgaaacat 184 |||||||||||||||||||||| Sbjct: 6190 acaacctggcgaactgaaacat 6211
>dbj|AP006444.1| Brassica napus mitochondrial DNA, complete genome Length = 221853 Score = 260 bits (131), Expect = 5e-66 Identities = 187/202 (92%), Gaps = 3/202 (1%) Strand = Plus / Minus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaa- 70 ||||| ||||||||||| |||||||||| | ||||||||| |||||| ||||||||||| Sbjct: 89867 ggcttacggtggataccaaggcacccagag-acgaggaagagcgtagtaagcgacgaaaa 89809 Query: 71 tgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctttta 130 |||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||| Sbjct: 89808 tgcttcggggagttgaaaataagcgtagatccggagattccggaataggttaaccttttg 89749 Query: 131 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 190 |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 89748 aactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttact 89690 Query: 191 agccagaggaaaagaaagcaaa 212 |||||||||||||||||||||| Sbjct: 89689 agccagaggaaaagaaagcaaa 89668 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 452 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 497 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 120438 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 120483
>gb|AC172860.1| Brassica rapa subsp. pekinensis clone KBrB042G11, complete sequence Length = 124347 Score = 260 bits (131), Expect = 5e-66 Identities = 187/202 (92%), Gaps = 3/202 (1%) Strand = Plus / Plus Query: 12 ggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaa- 70 ||||| ||||||||||| |||||||||| | ||||||||| |||||| ||||||||||| Sbjct: 403 ggcttacggtggataccaaggcacccagag-acgaggaagagcgtagtaagcgacgaaaa 461 Query: 71 tgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctttta 130 |||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||| Sbjct: 462 tgcttcggggagttgaaaataagcgtagatccggagattccggaataggttaaccttttg 521 Query: 131 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 190 |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 522 aactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttact 580 Query: 191 agccagaggaaaagaaagcaaa 212 |||||||||||||||||||||| Sbjct: 581 agccagaggaaaagaaagcaaa 602 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 452 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 497 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 42056 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 42101
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 258 bits (130), Expect = 2e-65 Identities = 201/224 (89%), Gaps = 3/224 (1%) Strand = Plus / Plus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 378 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 437 Query: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 497 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 438 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 497 Query: 498 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 557 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 498 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 554 Query: 558 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 601 |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 555 tttgatctctgaccgcgtgcctattgaagaatgagccggcgact 598 Score = 172 bits (87), Expect = 9e-40 Identities = 202/240 (84%), Gaps = 1/240 (0%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 78 || ||| ||||||||| |||| | |||| |||||||||| || |||||||| ||| ||| Sbjct: 10 ggyggagacctaggcatccagag-acgacgaagggcgtactaatcgacgaaacgctccgg 68 Query: 79 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 138 | || ||| || |||||| ||||||||||| ||| |||||| |||||| || |||| | Sbjct: 69 gaagctgacaagaagcattgatccggagatccccgaatagggcaacctcttgaactctcc 128 Query: 139 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 198 ||||||| || || | ||||||||||||| ||| |||||||||||||||||||||| Sbjct: 129 gctgaataaataggcggagcagagacaacctggtgaattgaaacatcttagtagccagag 188 Query: 199 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 258 |||||||||||||||||||||||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 189 gaaaagaaagcaaaagcgattcccttagtagcggcgagcgaaaggggaacagtctaaacc 248
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 258 bits (130), Expect = 2e-65 Identities = 201/224 (89%), Gaps = 3/224 (1%) Strand = Plus / Minus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 115284 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 115225 Query: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 497 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 115224 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 115165 Query: 498 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 557 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 115164 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 115108 Query: 558 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 601 |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 115107 tttgatctctgaccgcgtgcctattgaagaatgagccggcgact 115064 Score = 258 bits (130), Expect = 2e-65 Identities = 201/224 (89%), Gaps = 3/224 (1%) Strand = Plus / Plus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 86704 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 86763 Query: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 497 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 86764 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 86823 Query: 498 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 557 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 86824 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 86880 Query: 558 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 601 |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 86881 tttgatctctgaccgcgtgcctattgaagaatgagccggcgact 86924 Score = 194 bits (98), Expect = 2e-46 Identities = 212/249 (85%), Gaps = 1/249 (0%) Strand = Plus / Minus Query: 10 agggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaa 69 ||||||| ||||||||||||||||| |||| | |||| |||||||||| || ||||||| Sbjct: 115662 agggcttacggtggatacctaggcatccagag-acgacgaagggcgtactaatcgacgaa 115604 Query: 70 atgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctttt 129 | ||| |||| || ||| || |||||| ||||||||||| ||| |||||| |||||| || Sbjct: 115603 acgctccgggaagctgacaagaagcattgatccggagatccccgaatagggcaacctctt 115544 Query: 130 aaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttag 189 |||| | ||||||| || || | ||||||||||||| ||| ||||||||||||| Sbjct: 115543 gaactctccgctgaataaataggcggagcagagacaacctggtgaattgaaacatcttag 115484 Query: 190 tagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagca 249 ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| || Sbjct: 115483 tagccagaggaaaagaaagcaaaagcgattcccttagtagcggcgagcgaaaggggaaca 115424 Query: 250 gcctaaacc 258 | ||||||| Sbjct: 115423 gtctaaacc 115415 Score = 194 bits (98), Expect = 2e-46 Identities = 212/249 (85%), Gaps = 1/249 (0%) Strand = Plus / Plus Query: 10 agggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaa 69 ||||||| ||||||||||||||||| |||| | |||| |||||||||| || ||||||| Sbjct: 86326 agggcttacggtggatacctaggcatccagag-acgacgaagggcgtactaatcgacgaa 86384 Query: 70 atgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctttt 129 | ||| |||| || ||| || |||||| ||||||||||| ||| |||||| |||||| || Sbjct: 86385 acgctccgggaagctgacaagaagcattgatccggagatccccgaatagggcaacctctt 86444 Query: 130 aaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttag 189 |||| | ||||||| || || | ||||||||||||| ||| ||||||||||||| Sbjct: 86445 gaactctccgctgaataaataggcggagcagagacaacctggtgaattgaaacatcttag 86504 Query: 190 tagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagca 249 ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| || Sbjct: 86505 tagccagaggaaaagaaagcaaaagcgattcccttagtagcggcgagcgaaaggggaaca 86564 Query: 250 gcctaaacc 258 | ||||||| Sbjct: 86565 gtctaaacc 86573
>dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1109A06 Length = 171438 Score = 250 bits (126), Expect = 5e-63 Identities = 132/134 (98%) Strand = Plus / Minus Query: 472 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 531 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 108050 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 107991 Query: 532 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 591 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107990 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 107931 Query: 592 gccggcgactcata 605 |||||||||||||| Sbjct: 107930 gccggcgactcata 107917
>gb|L49157.1|STXCPRGOL Stigeoclonium helveticum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 6393 Score = 244 bits (123), Expect = 3e-61 Identities = 201/224 (89%), Gaps = 6/224 (2%) Strand = Plus / Plus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 410 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 469 Query: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 497 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 470 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 529 Query: 498 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 557 || | ||| ||||||||||||| ||||||||| | ||| |||||||||||| |||| Sbjct: 530 ccggaggggagtgaaatagaacatgaaaccgtcc---gctgacaagcagtggga--ggaa 584 Query: 558 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 601 | ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 585 atagat-tctgaccgcgtgcctgttgaagaatgagccggcgact 627 Score = 95.6 bits (48), Expect = 2e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 158 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 217 ||||| ||||| || ||| ||||||||||||||| || ||||||||||||||||| |||| Sbjct: 148 aagaggcaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaacgcga 207 Query: 218 ttcccgtagtagcggcgagcgaaatgggagcagcctaaac 257 || || ||||||||||||||||| || | |||||||||| Sbjct: 208 tttcctgagtagcggcgagcgaaacggaatcagcctaaac 247
>gb|L42993.1|URMCPRGOL Uronema belkae large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2619 Score = 244 bits (123), Expect = 3e-61 Identities = 201/224 (89%), Gaps = 6/224 (2%) Strand = Plus / Plus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 497 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 490 Query: 498 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 557 || | ||| |||||||||||||| |||||||| | ||| |||||||||||| |||| Sbjct: 491 ccggaggggagtgaaatagaacgcgaaaccgtcc---gctgacaagcagtggga--ggaa 545 Query: 558 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 601 ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 546 gaagat-tctgaccgcgtgcctgttgaagaatgagccggcgact 588 Score = 109 bits (55), Expect = 1e-20 Identities = 76/83 (91%) Strand = Plus / Plus Query: 158 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 217 ||||||||||| || ||| ||||||||||||||| || |||||||||||||||||||||| Sbjct: 140 aagagacaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaaagcga 199 Query: 218 ttcccgtagtagcggcgagcgaa 240 || || ||||||||||||||||| Sbjct: 200 tttccttagtagcggcgagcgaa 222
>gb|DQ160045.1| Taraxacum officinale To45-1 mRNA, partial sequence Length = 329 Score = 240 bits (121), Expect = 4e-60 Identities = 145/153 (94%) Strand = Plus / Minus Query: 306 cgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 365 |||||| || || ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 329 cgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 270 Query: 366 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 425 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 cttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 210 Query: 426 accttgcaaggctaaatactcctgggtgaccga 458 |||||||||||||||||||||||| | |||||| Sbjct: 209 accttgcaaggctaaatactcctgcgggaccga 177
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 238 bits (120), Expect = 2e-59 Identities = 217/247 (87%), Gaps = 2/247 (0%) Strand = Plus / Plus Query: 10 agggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaa 69 ||||||| ||||||||||||||| || ||| | |||| ||||||||||| |||||||||| Sbjct: 4047 agggcttacggtggatacctaggtactcagag-acgaagaagggcgtagtaagcgacgaa 4105 Query: 70 atgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctttt 129 |||||||||||||| ||||| | |||||||||||||||||||| ||| || |||| || Sbjct: 4106 atgcttcggggagtcgaaaacaggcatagatccggagattcccgaatggggtaacccctt 4165 Query: 130 aaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttag 189 |||||| ||||||||||| || | |||||| ||||||| ||||||||||||||||| Sbjct: 4166 gtactgcc-gctgaatccataggcggataagagagaacctggtgaactgaaacatcttag 4224 Query: 190 tagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagca 249 |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 4225 tagccagaggaaaaaaaagcaaaagcgattccctgagtagcggcgagcgaaatgggagaa 4284 Query: 250 gcctaaa 256 ||||||| Sbjct: 4285 gcctaaa 4291 Score = 232 bits (117), Expect = 1e-57 Identities = 242/283 (85%), Gaps = 3/283 (1%) Strand = Plus / Plus Query: 323 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 382 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 4370 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 4429 Query: 383 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 442 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 4430 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 4489 Query: 443 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 502 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 4490 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 4549 Query: 503 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 562 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 4550 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 4606 Query: 563 tctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 ||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 4607 tctttgaccgcgtgcctgttgaagaatgagccggcgactcata 4649
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 238 bits (120), Expect = 2e-59 Identities = 217/247 (87%), Gaps = 2/247 (0%) Strand = Plus / Plus Query: 10 agggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaa 69 ||||||| ||||||||||||||| || ||| | |||| ||||||||||| |||||||||| Sbjct: 14 agggcttacggtggatacctaggtactcagag-acgaagaagggcgtagtaagcgacgaa 72 Query: 70 atgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctttt 129 |||||||||||||| ||||| | |||||||||||||||||||| ||| || |||| || Sbjct: 73 atgcttcggggagtcgaaaacaggcatagatccggagattcccgaatggggtaacccctt 132 Query: 130 aaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttag 189 |||||| ||||||||||| || | |||||| ||||||| ||||||||||||||||| Sbjct: 133 gtactgcc-gctgaatccataggcggataagagagaacctggtgaactgaaacatcttag 191 Query: 190 tagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagca 249 |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 192 tagccagaggaaaaaaaagcaaaagcgattccctgagtagcggcgagcgaaatgggagaa 251 Query: 250 gcctaaa 256 ||||||| Sbjct: 252 gcctaaa 258 Score = 232 bits (117), Expect = 1e-57 Identities = 242/283 (85%), Gaps = 3/283 (1%) Strand = Plus / Plus Query: 323 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 382 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 383 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 442 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 443 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 502 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 503 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 562 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 573 Query: 563 tctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 ||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 574 tctttgaccgcgtgcctgttgaagaatgagccggcgactcata 616
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 232 bits (117), Expect = 1e-57 Identities = 180/201 (89%) Strand = Plus / Plus Query: 325 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 384 ||||||||||| | |||||||||| |||| |||| ||||||||||| |||| ||||| Sbjct: 332 accctagatggtgagagtccagtagtataaagtatcattagcttatgctttgactcgagt 391 Query: 385 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 444 |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 392 agcatgggacacgtggaatcccgtgtgaatcagcaaggatcaccttgcaaggctaaatac 451 Query: 445 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 504 || ||||||||| |||| |||||||||||||||||||| ||||||||||||| | | ||| Sbjct: 452 tcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaacctctactgg 511 Query: 505 gtagtgaaatagaacgtgaaa 525 | ||||||||||||| ||||| Sbjct: 512 ggagtgaaatagaacatgaaa 532 Score = 182 bits (92), Expect = 9e-43 Identities = 218/255 (85%), Gaps = 4/255 (1%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 78 ||||||||||||||||||||| | | || ||||||| || || || |||||||||||| Sbjct: 21 ggtggatacctaggcacccaggg-atgaagaagggcataataattgatgaaatgcttcgg 79 Query: 79 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 138 |||||| ||||||| ||||||||||||||||||| ||||||| ||||||| |||||| || Sbjct: 80 ggagttaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactg-ct 138 Query: 139 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 198 ||| | |||||| |||| ||| ||| ||||||| |||||||| ||||||||||| ||||| Sbjct: 139 gcttattccatg-gcagacaaaaga-aacctggtgaactgaatcatcttagtagacagag 196 Query: 199 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 258 ||||| |||||||||| ||| || |||||| |||||| |||| |||| ||||||||||| Sbjct: 197 gaaaataaagcaaaagttattaccatagtagtggcgagtgaaaagggaacagcctaaacc 256 Query: 259 gtgaaaacggggttg 273 | |||| ||||||| Sbjct: 257 gctaaaatggggttg 271 Score = 67.9 bits (34), Expect = 4e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 564 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 ||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 566 ctctgactgcgttcctgttgaagaatgagccggcgactcata 607
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 232 bits (117), Expect = 1e-57 Identities = 206/235 (87%), Gaps = 3/235 (1%) Strand = Plus / Plus Query: 371 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 430 ||||| |||| ||||||||||| |||||| ||||||||||||||| || |||||||||| Sbjct: 380 gctctaacccaagtagcatgggacacgtgaaatcccgtgtgaatctgcgaggaccacctc 439 Query: 431 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 490 ||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 440 gcaaggctaaatacttctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaa 499 Query: 491 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 550 |||||||||| ||| ||||||| ||||| |||||||| | ||| ||||||||||| Sbjct: 500 agaacccccataggggagtgaaaaagaacatgaaaccg---taggctttcaagcagtggg 556 Query: 551 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 || ||| | |||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 557 agaagaattttatctttgaccgcgtgcctgttgaagaatgagccggcgactcata 611 Score = 208 bits (105), Expect = 2e-50 Identities = 215/248 (86%), Gaps = 3/248 (1%) Strand = Plus / Plus Query: 10 agggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaa 69 ||||||| ||||||||||||||| || ||| | |||| ||||||||||| |||||||||| Sbjct: 14 agggcttacggtggatacctaggtactcagag-acgaagaagggcgtagtaagcgacgaa 72 Query: 70 atgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct-tt 128 | |||||||||||| ||||| | | ||||||||||||||||| ||| || |||| || Sbjct: 73 acgcttcggggagtcgaaaacagacgtagatccggagattcccgaatggggtaacccctt 132 Query: 129 taaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctta 188 | |||||| ||||||| ||| ||| | |||||||||||||| |||||||||||||||| Sbjct: 133 tgtactgcc-gctgaattcataagcggataagagacaacctggtgaactgaaacatctta 191 Query: 189 gtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagc 248 ||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 192 gtaaccagaggaaaagaaagcaaaagcgatttcctgagtagcggcgagcgaaatgggaga 251 Query: 249 agcctaaa 256 |||||||| Sbjct: 252 agcctaaa 259
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 232 bits (117), Expect = 1e-57 Identities = 242/283 (85%), Gaps = 3/283 (1%) Strand = Plus / Plus Query: 323 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 382 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 383 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 442 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 443 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 502 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 503 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 562 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 573 Query: 563 tctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 ||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 574 tctttgaccgcgtgcctgttgaagaatgagccggcgactcata 616 Score = 230 bits (116), Expect = 4e-57 Identities = 216/247 (87%), Gaps = 2/247 (0%) Strand = Plus / Plus Query: 10 agggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaa 69 ||||||| ||||||||||||||| || ||| | |||| ||||||||||| |||||||||| Sbjct: 14 agggcttacggtggatacctaggtactcagag-acgaagaagggcgtagtaagcgacgaa 72 Query: 70 atgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctttt 129 |||||||||||||| ||||| | |||||||||||||||||||| ||| || |||| || Sbjct: 73 atgcttcggggagtcgaaaacaggcatagatccggagattcccgaatggggtaacccctt 132 Query: 130 aaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttag 189 |||||| ||||||| ||| || | |||||| ||||||| ||||||||||||||||| Sbjct: 133 gtactgcc-gctgaatacataggcggataagagagaacctggtgaactgaaacatcttag 191 Query: 190 tagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagca 249 |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 192 tagccagaggaaaaaaaagcaaaagcgattccctgagtagcggcgagcgaaatgggagaa 251 Query: 250 gcctaaa 256 ||||||| Sbjct: 252 gcctaaa 258
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 230 bits (116), Expect = 4e-57 Identities = 198/224 (88%), Gaps = 6/224 (2%) Strand = Plus / Plus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 398 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 457 Query: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 497 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 458 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 517 Query: 498 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 557 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 518 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 574 Query: 558 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 601 | | | |||||||||||||||||||||||||||||||||||| Sbjct: 575 a---agccctgaccgcgtgcctgttgaagaatgagccggcgact 615 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 159 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 218 |||| |||||| | ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 149 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 208 Query: 219 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 259 |||| |||||||||||||| || |||| |||||||||||| Sbjct: 209 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 249 Score = 85.7 bits (43), Expect = 2e-13 Identities = 92/108 (85%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 78 || ||| |||||||||||||| | |||| ||||||||||| || |||||||| ||||||| Sbjct: 10 ggyggagacctaggcacccagag-acgatgaagggcgtagtaaccgacgaaacgcttcgg 68 Query: 79 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 126 |||| || ||| |||| | |||||| |||||||| |||||| |||||| Sbjct: 69 ggagctggaaacaagctttgatccgtagattcccgaatagggcaacct 116
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 230 bits (116), Expect = 4e-57 Identities = 198/224 (88%), Gaps = 6/224 (2%) Strand = Plus / Plus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 2167 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 2226 Query: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 497 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 2227 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 2286 Query: 498 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 557 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 2287 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 2343 Query: 558 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 601 | | | |||||||||||||||||||||||||||||||||||| Sbjct: 2344 a---agccctgaccgcgtgcctgttgaagaatgagccggcgact 2384 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 159 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 218 |||| |||||| | ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 1915 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 1974 Query: 219 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 259 |||| |||||||||||||| || |||| |||||||||||| Sbjct: 1975 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 2015 Score = 107 bits (54), Expect = 4e-20 Identities = 102/117 (87%), Gaps = 1/117 (0%) Strand = Plus / Plus Query: 10 agggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaa 69 ||||||| |||||||||||||||||||||| | |||| ||||||||||| || ||||||| Sbjct: 1767 agggcttacggtggatacctaggcacccagag-acgatgaagggcgtagtaaccgacgaa 1825 Query: 70 atgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 126 | ||||||||||| || ||| |||| | |||||| |||||||| |||||| |||||| Sbjct: 1826 acgcttcggggagctggaaacaagctttgatccgtagattcccgaatagggcaacct 1882
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 230 bits (116), Expect = 4e-57 Identities = 202/230 (87%), Gaps = 3/230 (1%) Strand = Plus / Plus Query: 372 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 431 |||| |||||||||||||| |||||||| || | |||||||||||| |||||||||| | Sbjct: 338 ctctaacccgagtagcatgaggcacgtgaaaccttgtgtgaatcagcgaggaccacctcg 397 Query: 432 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 491 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 398 taaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaa 457 Query: 492 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 551 ||||||||| |||| ||||||||||| |||||||| | ||| |||||||||||| Sbjct: 458 gaacccccactggggagtgaaatagataatgaaaccg---taagcctacaagcagtggga 514 Query: 552 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 601 || || | || ||||||||||||||||||||||||||||||||||||| Sbjct: 515 ggaaaatataatttctgaccgcgtgcctgttgaagaatgagccggcgact 564 Score = 139 bits (70), Expect = 1e-29 Identities = 88/94 (93%) Strand = Plus / Plus Query: 165 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 224 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 125 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatttcctt 184 Query: 225 agtagcggcgagcgaaatgggagcagcctaaacc 258 ||||| ||||||||||| || | ||||||||||| Sbjct: 185 agtagtggcgagcgaaacggaatcagcctaaacc 218 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Plus Query: 43 acgaggaagggcgtagcaagcgacgaaatgcttcgg 78 |||| ||||||||||| ||||||||||| ||||||| Sbjct: 7 acgaagaagggcgtagtaagcgacgaaacgcttcgg 42
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 230 bits (116), Expect = 4e-57 Identities = 233/271 (85%), Gaps = 1/271 (0%) Strand = Plus / Plus Query: 10 agggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaa 69 ||||||| |||||||||||||||| |||| | |||| ||||||||||| |||||||||| Sbjct: 14 agggcttatggtggatacctaggcatccagag-acgaagaagggcgtagtaagcgacgaa 72 Query: 70 atgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctttt 129 ||||||||||||| || || ||| ||||||||| |||||||| |||||| |||||| || Sbjct: 73 atgcttcggggagctgcgaacaagtatagatccgaagattcccgaatagggcaacctctt 132 Query: 130 aaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttag 189 ||| |||| ||| ||| | |||| ||||| ||||| | ||||||||||||||||| Sbjct: 133 gtactacctgtaaaatacataatcaggttagagaaaacctagtgaactgaaacatcttag 192 Query: 190 tagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagca 249 |||| ||||||| | |||||||||||||||||| |||||| ||||||||||| |||| || Sbjct: 193 tagctagaggaataaaaagcaaaagcgattcccttagtagtggcgagcgaaacgggaaca 252 Query: 250 gcctaaaccgtgaaaacggggttgtgggaga 280 ||||||||||||||| ||||||||||||||| Sbjct: 253 gcctaaaccgtgaaagcggggttgtgggaga 283 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 382 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 441 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 444 Query: 442 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 501 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 504 Query: 502 tgggtagtgaaatagaacgtgaaacc 527 ||| ||||||||||||| ||||||| Sbjct: 505 aggggagtgaaatagaacatgaaacc 530 Score = 69.9 bits (35), Expect = 9e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 567 tgaccgcgtgcctgttgaagaatgagccggcgact 601 ||||||||||||||||||||||||||||||||||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgact 601
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 228 bits (115), Expect = 2e-56 Identities = 198/224 (88%), Gaps = 5/224 (2%) Strand = Plus / Plus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 376 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 435 Query: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 497 || |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 436 tacatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 495 Query: 498 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 557 || ||| ||||||| ||| | |||||||| || ||| |||||||||||||||| Sbjct: 496 ccgcaggggagtgaaaaagatcatgaaaccg---tgtgcttacaagcagtgggagggg-- 550 Query: 558 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 601 ||| | |||||||||||||||||||||||||||||||||||| Sbjct: 551 cctgagccctgaccgcgtgcctgttgaagaatgagccggcgact 594 Score = 163 bits (82), Expect = 8e-37 Identities = 202/241 (83%), Gaps = 1/241 (0%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 78 |||||||||||||||||| || | |||| ||||||||| | | |||||| | ||| ||| Sbjct: 10 ggtggatacctaggcacctagag-acgaagaagggcgtcactaccgacgatacgctccgg 68 Query: 79 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 138 |||| || || ||||| | ||||||||||||||| ||| || |||||| ||| ||| Sbjct: 69 ggagctggaagtaagcttcgatccggagattcccgaatggggcaacctcaaggactccct 128 Query: 139 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 198 ||||||| ||| ||||| |||| |||| || |||||||||||||||||||||| ||| Sbjct: 129 gctgaattcataggcagggtagaggaaacccggtgaactgaaacatcttagtagccggag 188 Query: 199 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 258 |||||||||||||| ||||||||| |||||||||||||||||| |||| ||||||||||| Sbjct: 189 gaaaagaaagcaaacgcgattcccttagtagcggcgagcgaaacgggaccagcctaaacc 248 Query: 259 g 259 | Sbjct: 249 g 249
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 340 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 399 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 400 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 459 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 460 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 519 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 520 gtgaaa 525 ||||| Sbjct: 504 atgaaa 509 Score = 153 bits (77), Expect = 8e-34 Identities = 200/235 (85%), Gaps = 5/235 (2%) Strand = Plus / Plus Query: 22 ggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgggga 81 |||||||||||||||||| | ||| ||||||| || || || ||||||||||||||| Sbjct: 24 ggatacctaggcacccagggt-cgaagaagggcataataattgatgaaatgcttcgggga 82 Query: 82 gttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgc 140 ||| |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| ||| Sbjct: 83 gttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgc 141 Query: 141 tgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagga 200 | | |||||| | || ||||||| |||| || ||||||||||||||||||| |||||||| Sbjct: 142 ttattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagagga 199 Query: 201 aaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 255 ||| |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 200 aaataaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 564 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 340 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 399 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 400 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 459 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 460 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 519 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 520 gtgaaa 525 ||||| Sbjct: 503 atgaaa 508 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 67 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 125 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 126 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 185 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 186 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 245 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 246 agcagcctaa 255 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 564 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 582
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 340 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 399 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 400 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 459 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 460 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 519 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 520 gtgaaa 525 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 67 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 125 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 126 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 185 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 186 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 245 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 246 agcagcctaa 255 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 564 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 340 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 399 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 400 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 459 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 460 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 519 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 520 gtgaaa 525 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 67 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 125 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 126 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 185 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 186 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 245 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 246 agcagcctaa 255 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 564 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||| ||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccacgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 340 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 399 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 400 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 459 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 460 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 519 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 520 gtgaaa 525 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 67 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 125 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 126 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 185 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 186 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 245 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 246 agcagcctaa 255 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 564 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 340 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 399 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 400 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 459 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 460 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 519 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 520 gtgaaa 525 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 159/182 (87%), Gaps = 4/182 (2%) Strand = Plus / Plus Query: 67 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 125 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 126 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 185 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 186 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 245 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 246 ag 247 || Sbjct: 245 ag 246 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 564 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 340 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 399 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 400 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 459 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 460 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 519 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 520 gtgaaa 525 ||||| Sbjct: 503 atgaaa 508 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 67 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 125 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 126 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 185 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 186 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 245 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 246 agcagcctaa 255 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 564 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 582
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 340 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 399 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 400 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 459 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 460 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 519 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 520 gtgaaa 525 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 67 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 125 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 126 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 185 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 186 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 245 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 246 agcagcctaa 255 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 564 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 340 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 399 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 400 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 459 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 460 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 519 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 520 gtgaaa 525 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 67 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 125 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 126 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 185 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 186 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 245 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 246 agcagcctaa 255 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 564 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 340 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 399 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 400 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 459 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 460 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 519 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 520 gtgaaa 525 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 67 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 125 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 126 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 185 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 186 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 245 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 246 agcagcctaa 255 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 564 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 340 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 399 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 400 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 459 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 460 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 519 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 520 gtgaaa 525 ||||| Sbjct: 504 atgaaa 509 Score = 155 bits (78), Expect = 2e-34 Identities = 166/190 (87%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 67 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 125 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 126 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 185 ||| ||||||| |||| | |||||| | || ||||||| |||| |||||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggcgaactgaaacatc 184 Query: 186 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 245 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 246 agcagcctaa 255 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 564 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 340 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 399 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 400 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 459 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 460 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 519 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 520 gtgaaa 525 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 67 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 125 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 126 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 185 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 186 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 245 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 246 agcagcctaa 255 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 564 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 340 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 399 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 400 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 459 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 460 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 519 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 520 gtgaaa 525 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 67 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 125 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 126 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 185 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 186 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 245 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 246 agcagcctaa 255 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 564 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 340 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 399 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 400 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 459 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 460 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 519 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 520 gtgaaa 525 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 67 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 125 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 126 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 185 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 186 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 245 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 246 agcagcctaa 255 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 564 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 340 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 399 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 400 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 459 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 460 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 519 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 520 gtgaaa 525 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 67 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 125 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 126 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 185 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 186 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 245 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 246 agcagcctaa 255 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 564 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 216 bits (109), Expect = 6e-53 Identities = 199/226 (88%), Gaps = 6/226 (2%) Strand = Plus / Plus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 355 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 414 Query: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa-gaacc 496 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 415 taaatactcctgggtaaccgatagtgaagtagtaccgtgagggaaaggtgaaaaagaacc 474 Query: 497 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 556 || | ||| ||||||| ||||| ||||||| || |||| |||||||||||| ||| Sbjct: 475 cctggaggggagtgaaaaagaacatgaaacc---ctaagctgacaagcagtggga--gga 529 Query: 557 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 602 | | |||||||||||||||||||||||||||||||||||||| Sbjct: 530 cttttaagtctgaccgcgtgcctgttgaagaatgagccggcgactc 575 Score = 123 bits (62), Expect = 7e-25 Identities = 86/94 (91%) Strand = Plus / Plus Query: 164 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 223 ||||| || ||| |||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 64 caacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcgattcccc 123 Query: 224 tagtagcggcgagcgaaatgggagcagcctaaac 257 |||||||||||||||||| |||| |||||||||| Sbjct: 124 tagtagcggcgagcgaaaagggaacagcctaaac 157
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 214 bits (108), Expect = 3e-52 Identities = 231/271 (85%), Gaps = 1/271 (0%) Strand = Plus / Plus Query: 10 agggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaa 69 ||||||| |||||||||||||||| |||| | |||| ||||||||||| |||||||||| Sbjct: 3048 agggcttatggtggatacctaggcatccagag-acgaagaagggcgtagtaagcgacgaa 3106 Query: 70 atgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctttt 129 |||||| |||||| || || ||| ||||||||| |||||||| |||||| |||||| || Sbjct: 3107 atgctttggggagctgcgaacaagtatagatccgaagattcccgaatagggcaacctctt 3166 Query: 130 aaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttag 189 ||| |||| ||| ||| |||| ||||| ||||| | ||||||||||||||||| Sbjct: 3167 gtactacctgtaaaatacatagtcaggttagagaaaacctagtgaactgaaacatcttag 3226 Query: 190 tagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagca 249 |||| ||||||| | |||||||||||||||||| |||||| ||||||||||| |||| || Sbjct: 3227 tagctagaggaataaaaagcaaaagcgattcccttagtagtggcgagcgaaacgggaaca 3286 Query: 250 gcctaaaccgtgaaaacggggttgtgggaga 280 ||||||||||||||| ||||||||||||||| Sbjct: 3287 gcctaaaccgtgaaagcggggttgtgggaga 3317 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 382 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 441 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 3419 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 3478 Query: 442 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 501 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 3479 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 3538 Query: 502 tgggtagtgaaatagaacgtgaaacc 527 ||| ||||||||||||| ||||||| Sbjct: 3539 aggggagtgaaatagaacatgaaacc 3564 Score = 69.9 bits (35), Expect = 9e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 567 tgaccgcgtgcctgttgaagaatgagccggcgact 601 ||||||||||||||||||||||||||||||||||| Sbjct: 3601 tgaccgcgtgcctgttgaagaatgagccggcgact 3635
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 212 bits (107), Expect = 1e-51 Identities = 196/225 (87%), Gaps = 3/225 (1%) Strand = Plus / Plus Query: 377 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 436 |||||||||||||| |||||||| || | ||||||||||||| |||||||||| | |||| Sbjct: 784 acccgagtagcatgaggcacgtgaaacctcgtgtgaatcagcgaggaccacctcgtaagg 843 Query: 437 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 496 |||||||||||| ||||| |||||| |||| ||||||||||||||||||||||||||||| Sbjct: 844 ctaaatactcctaggtgatcgatagtgaagaagtaccgtgagggaaaggtgaaaagaacc 903 Query: 497 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 556 |||| ||| ||||||||||| |||||||| | |||| ||||||||||||| || Sbjct: 904 cccataggggagtgaaatagactatgaaaccg---taagcttacaagcagtgggagaaga 960 Query: 557 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 601 | | |||| ||||||||||||||||||||||||||||||||||| Sbjct: 961 atctaatctttgaccgcgtgcctgttgaagaatgagccggcgact 1005 Score = 178 bits (90), Expect = 1e-41 Identities = 213/251 (84%), Gaps = 4/251 (1%) Strand = Plus / Plus Query: 10 agggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaa 69 ||||||| ||||||||||||| |||| || |||| ||||||||||| |||||||||| Sbjct: 417 agggcttatggtggatacctagacacctaga-aacgatgaagggcgtagaaagcgacgaa 475 Query: 70 atgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctttt 129 ||||||||| | || || ||| || | |||||||||||| |||||| |||||| | Sbjct: 476 atgcttcggttaactgcgaacaag--taaacccggagattcccgaatagggcaacctgt- 532 Query: 130 aaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttag 189 ||||||| |||||||| ||| || | |||||||||||||| ||||||||||||||||| Sbjct: 533 aaactgcttgctgaattcataggcgagtaagagacaacctggtgaactgaaacatcttag 592 Query: 190 tagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagca 249 || ||||||||| |||||||||||||||||||| |||||| ||||||||||| |||| || Sbjct: 593 taaccagaggaacagaaagcaaaagcgattcccttagtagtggcgagcgaaacgggaaca 652 Query: 250 gcctaaaccgt 260 ||||||||||| Sbjct: 653 gcctaaaccgt 663
>gb|L49155.1|NEHCPRGOLA Neochloris aquatica chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5569 Score = 212 bits (107), Expect = 1e-51 Identities = 196/224 (87%), Gaps = 5/224 (2%) Strand = Plus / Plus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||| | Sbjct: 517 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagac 576 Query: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 497 |||||||||||| | ||||||||||||| |||||| | || ||||||||||||||||||| Sbjct: 577 taaatactcctgagagaccgatagcgaaatagtacagcgatggaaaggtgaaaagaaccc 636 Query: 498 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 557 || ||| ||||||||||||| ||||| || |||||| |||||||||||| ||| Sbjct: 637 ccgtaggggagtgaaatagaacatgaaatcg---tgagctgacaagcagtggga--ggat 691 Query: 558 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 601 ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 692 tttgaaatctgaccgcgtgcctgttgaagaatgagccggcgact 735 Score = 129 bits (65), Expect = 1e-26 Identities = 83/89 (93%) Strand = Plus / Plus Query: 158 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 217 ||||| |||||||| |||||||||||||| ||||||||||||| ||||| |||||||||| Sbjct: 148 aagaggcaacctggtgaactgaaacatctcagtagccagaggagaagaacgcaaaagcga 207 Query: 218 ttcccgtagtagcggcgagcgaaatggga 246 ||||| ||||||||||||||||||||||| Sbjct: 208 ttcccttagtagcggcgagcgaaatggga 236
>gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2920 Score = 212 bits (107), Expect = 1e-51 Identities = 140/151 (92%) Strand = Plus / Plus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 601 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 660 Query: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 497 |||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||| Sbjct: 661 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtaaaaagaaccc 720 Query: 498 ccagtgggtagtgaaatagaacgtgaaaccg 528 || |||| ||||||||||||| |||||||| Sbjct: 721 ccgttggggagtgaaatagaacatgaaaccg 751 Score = 151 bits (76), Expect = 3e-33 Identities = 166/196 (84%) Strand = Plus / Plus Query: 63 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 122 |||||||| ||||||||||| || ||||||| | |||||| |||| ||| |||||| || Sbjct: 45 cgacgaaacgcttcggggagctggcaataagcgttgatccgaagatccccgaatagggca 104 Query: 123 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 182 |||| |||| ||| | ||| ||| || |||||||||| |||| || |||||||||| Sbjct: 105 acctcaagaactacctccctaattcataaggaggcaagagagaacccggtgaactgaaac 164 Query: 183 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 242 |||| ||||||| ||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 165 atctaagtagccggaggaaaagaaagcaaacgcgattcccatagtagcggcgagcgaaaa 224 Query: 243 gggagcagcctaaacc 258 |||| ||||||||||| Sbjct: 225 gggaacagcctaaacc 240 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 566 ctgaccgcgtgcctgttgaagaatgagccggcgact 601 |||||||||||||||||||||||||||||||||||| Sbjct: 796 ctgaccgcgtgcctgttgaagaatgagccggcgact 831
>gb|AF482503.1| Chlorokybus atmophyticus 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast genes for chloroplast products Length = 906 Score = 210 bits (106), Expect = 4e-51 Identities = 172/193 (89%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 10 agggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaa 69 ||||||| |||||||||||||||||||||| | |||| |||||||||| || ||||||| Sbjct: 715 agggcttacggtggatacctaggcacccagag-acgaagaagggcgtactaaccgacgaa 773 Query: 70 atgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctttt 129 | ||||||||||| |||||| |||||| ||||||||||||||| |||||| |||||| || Sbjct: 774 acgcttcggggagctgaaaagaagcattgatccggagattcccgaatagggcaacctctt 833 Query: 130 aaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttag 189 |||| |||||||||| ||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 834 gaacttcctgctgaattcataggcaggatagagacaacctggcgaactgaaacatcttag 893 Query: 190 tagccagaggaaa 202 ||||||||||||| Sbjct: 894 tagccagaggaaa 906
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 210 bits (106), Expect = 4e-51 Identities = 166/186 (89%) Strand = Plus / Plus Query: 340 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 399 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 400 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 459 ||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccatgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 460 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 519 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 520 gtgaaa 525 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 159/182 (87%), Gaps = 4/182 (2%) Strand = Plus / Plus Query: 67 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 125 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 126 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 185 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 186 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 245 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 246 ag 247 || Sbjct: 245 ag 246 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 564 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 210 bits (106), Expect = 4e-51 Identities = 229/269 (85%), Gaps = 1/269 (0%) Strand = Plus / Plus Query: 10 agggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaa 69 ||||||| |||||||||||||||| |||| | |||| ||||||||||| ||||||||| Sbjct: 14 agggcttatggtggatacctaggcatccagag-acgaagaagggcgtagtcagcgacgaa 72 Query: 70 atgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctttt 129 ||||||||||||| || || ||||||| ||||| |||||||| |||||| ||||| || Sbjct: 73 atgcttcggggagctgcgaacaagcataaatccgaagattcccgaatagggtaacctctt 132 Query: 130 aaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttag 189 ||| |||| |||| || | |||| ||||| ||||| | ||||||||||||||||| Sbjct: 133 gtactacctgtagaattaataatcaggttagagaaaacctagtgaactgaaacatcttag 192 Query: 190 tagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagca 249 |||| |||||||||||||||||||||||||||| ||||| ||||||||||| |||| || Sbjct: 193 tagctagaggaaaagaaagcaaaagcgattccctcagtagtggcgagcgaaacgggaaca 252 Query: 250 gcctaaaccgtgaaaacggggttgtggga 278 |||||||||| |||| ||||||||||||| Sbjct: 253 gcctaaaccgcgaaagcggggttgtggga 281 Score = 194 bits (98), Expect = 2e-46 Identities = 190/220 (86%), Gaps = 3/220 (1%) Strand = Plus / Plus Query: 382 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 441 ||||| ||||| |||||| |||||| | |||||| |||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatctacaaggaccaccttgtaaggctaaa 444 Query: 442 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 501 |||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgcgagggaaaggtgaaaagaacccccat 504 Query: 502 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 561 ||| ||||||||||||| ||||||| | |||| |||||||||||||| | | Sbjct: 505 aggggagtgaaatagaacatgaaacc---ataagctttcaagcagtgggaggaggattga 561 Query: 562 atctctgaccgcgtgcctgttgaagaatgagccggcgact 601 | || ||||||||||||||||||||||||||||||||||| Sbjct: 562 acctttgaccgcgtgcctgttgaagaatgagccggcgact 601
>gb|L43500.1|RTCCPRRNL Carteria olivieri Length = 5667 Score = 206 bits (104), Expect = 6e-50 Identities = 140/152 (92%) Strand = Plus / Plus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 691 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 750 Query: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 497 |||||||||||||||||||||||||||| |||||||| ||||||| ||| |||||||||| Sbjct: 751 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaagggtaaaaagaaccc 810 Query: 498 ccagtgggtagtgaaatagaacgtgaaaccgt 529 || |||| ||||||||||||| ||||||||| Sbjct: 811 ccgttggggagtgaaatagaacatgaaaccgt 842 Score = 145 bits (73), Expect = 2e-31 Identities = 97/105 (92%) Strand = Plus / Plus Query: 154 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 213 |||||||||| |||| || |||||||||||||| ||||||| |||||||||||||||||| Sbjct: 137 aggcaagagagaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaa 196 Query: 214 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 258 ||||||||| |||||||||||||||||| |||| ||||||||||| Sbjct: 197 gcgattcccttagtagcggcgagcgaaaagggaacagcctaaacc 241 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 566 ctgaccgcgtgcctgttgaagaatgagccggcgact 601 |||||||||||||||||||||||||||||||||||| Sbjct: 895 ctgaccgcgtgcctgttgaagaatgagccggcgact 930
>gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CelI gene Length = 3779 Score = 206 bits (104), Expect = 6e-50 Identities = 142/152 (93%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 409 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 468 Query: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 497 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 469 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 528 Query: 498 ccagtgggtagtgaaatagaacgtgaaaccgt 529 || || || ||||||||||||| ||||||||| Sbjct: 529 cc-gtagg-agtgaaatagaacatgaaaccgt 558 Score = 123 bits (62), Expect = 7e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 177 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 236 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 tgaaacatcttagtagctggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 223 Query: 237 cgaaatgggagcagcctaaacc 258 |||| |||| ||||||||||| Sbjct: 224 cgaaccgggaacagcctaaacc 245 Score = 73.8 bits (37), Expect = 6e-10 Identities = 37/37 (100%) Strand = Plus / Plus Query: 565 tctgaccgcgtgcctgttgaagaatgagccggcgact 601 ||||||||||||||||||||||||||||||||||||| Sbjct: 585 tctgaccgcgtgcctgttgaagaatgagccggcgact 621 Score = 46.1 bits (23), Expect = 0.13 Identities = 87/108 (80%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 78 || ||| |||||||||||||| | |||| |||||||| || | || ||||| ||||||| Sbjct: 3 ggyggagacctaggcacccagag-acgatgaagggcgcagataccggcgaaacgcttcgg 61 Query: 79 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 126 |||| || || |||| | |||||| |||| ||| |||||| |||||| Sbjct: 62 ggagctggcaacaagctttgatccgaagatccccgaatagggcaacct 109
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 202 bits (102), Expect = 1e-48 Identities = 117/122 (95%) Strand = Plus / Plus Query: 377 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 436 ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 373 acccgagtagcatggggcacgtgaaatcccgtgtgaatccgcaaggaccaccttgcaagg 432 Query: 437 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 496 |||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 433 ctaaatactcctagatgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 492 Query: 497 cc 498 || Sbjct: 493 cc 494 Score = 159 bits (80), Expect = 1e-35 Identities = 98/104 (94%) Strand = Plus / Plus Query: 156 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagc 215 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 147 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaacgc 206 Query: 216 gattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 259 ||||||| ||||||||||||||||| |||| ||||||||||| Sbjct: 207 gattcccttagtagcggcgagcgaagcgggaatagcctaaaccg 250 Score = 69.9 bits (35), Expect = 9e-09 Identities = 77/90 (85%), Gaps = 1/90 (1%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 78 |||||||||||||||| | || | |||||||||||||| | | |||||||||||||||| Sbjct: 23 ggtggatacctaggcatctagag-acgaggaagggcgtggttaccgacgaaatgcttcgg 81 Query: 79 ggagttgaaaataagcatagatccggagat 108 ||||||| ||| | || |||||||||||| Sbjct: 82 ggagttggaaagaggctgagatccggagat 111 Score = 67.9 bits (34), Expect = 4e-08 Identities = 34/34 (100%) Strand = Plus / Plus Query: 568 gaccgcgtgcctgttgaagaatgagccggcgact 601 |||||||||||||||||||||||||||||||||| Sbjct: 562 gaccgcgtgcctgttgaagaatgagccggcgact 595
>emb|X52737.1|CHCO23S Coleochaete orbicularis chloroplast DNA for transfer RNA-Ala, transfer RNA-Ile and 23S ribosomal RNA Length = 2305 Score = 202 bits (102), Expect = 1e-48 Identities = 135/146 (92%) Strand = Plus / Plus Query: 382 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 441 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 2152 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 2211 Query: 442 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 501 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2212 tactcctgggtgaccgatagcgaagaagtaccgtgagggaaaggtgaaaagaacccccat 2271 Query: 502 tgggtagtgaaatagaacgtgaaacc 527 ||| ||||||||||||| ||||||| Sbjct: 2272 aggggagtgaaatagaacatgaaacc 2297 Score = 194 bits (98), Expect = 2e-46 Identities = 227/269 (84%), Gaps = 1/269 (0%) Strand = Plus / Plus Query: 10 agggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaa 69 ||||||| |||||||||||||||| |||| | |||| ||||||||||| |||||||||| Sbjct: 1781 agggcttatggtggatacctaggcatccagag-acgaagaagggcgtagtaagcgacgaa 1839 Query: 70 atgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctttt 129 ||||||||||||| || || ||| ||| ||||| |||||||| |||||| ||||| || Sbjct: 1840 atgcttcggggagctgcgaacaagtataaatccgaagattcccgaatagggtaacctctt 1899 Query: 130 aaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttag 189 ||| |||| |||| || | |||| ||||| ||||| | ||||||||||||||||| Sbjct: 1900 gtactacctgtataatcaataatcaggttagagaaaacctagtgaactgaaacatcttag 1959 Query: 190 tagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagca 249 |||| ||||||| | |||||||||||||||||| |||||| ||||||||||| |||| | Sbjct: 1960 tagctagaggaataaaaagcaaaagcgattcccttagtagtggcgagcgaaacgggaacc 2019 Query: 250 gcctaaaccgtgaaaacggggttgtggga 278 ||||||||||| ||| ||||||||||||| Sbjct: 2020 gcctaaaccgttaaagcggggttgtggga 2048
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 558 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 617 Query: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 497 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 618 taaatactcctgggtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaacct 677 Query: 498 ccagtgggtagtgaaatagaacgtgaaaccgt 529 | | | ||||||||||||| ||||||||| Sbjct: 678 ctgaagaggagtgaaatagaacatgaaaccgt 709 Score = 131 bits (66), Expect = 3e-27 Identities = 78/82 (95%) Strand = Plus / Plus Query: 177 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 236 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 tgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 219 Query: 237 cgaaatgggagcagcctaaacc 258 |||| ||||| |||||||||| Sbjct: 220 cgaactgggactagcctaaacc 241 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 566 ctgaccgcgtgcctgttgaagaatgagccggcgact 601 |||||||||||||||||||||||||||||||||||| Sbjct: 745 ctgaccgcgtgcctgttgaagaatgagccggcgact 780
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 497 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 498 ccagtgggtagtgaaatagaacgtgaaaccgt 529 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 7e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 173 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 232 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 233 cgagcgaaatgggagcagcctaaac 257 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 69.9 bits (35), Expect = 9e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 567 tgaccgcgtgcctgttgaagaatgagccggcgact 601 ||||||||||||||||||||||||||||||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgact 615 Score = 52.0 bits (26), Expect = 0.002 Identities = 89/109 (81%), Gaps = 1/109 (0%) Strand = Plus / Plus Query: 18 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 77 ||||||| |||||||||| ||| | |||| |||||||| || | || ||| | |||||| Sbjct: 20 cggtggagacctaggcactcagag-acgaagaagggcgcagataccggcgatacgcttcg 78 Query: 78 gggagttgaaaataagcatagatccggagattcccaaataggtcaacct 126 ||||| || || |||| | |||||| ||||||||||||||| |||||| Sbjct: 79 gggagctggcaacaagctttgatccgaagattcccaaatagggcaacct 127
>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4038 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 497 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 498 ccagtgggtagtgaaatagaacgtgaaaccgt 529 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 173 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 232 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 233 cgagcgaaatgggagcagcctaaacc 258 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 69.9 bits (35), Expect = 9e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 567 tgaccgcgtgcctgttgaagaatgagccggcgact 601 ||||||||||||||||||||||||||||||||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgact 669 Score = 52.0 bits (26), Expect = 0.002 Identities = 89/109 (81%), Gaps = 1/109 (0%) Strand = Plus / Plus Query: 18 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 77 ||||||| |||||||||| ||| | |||| |||||||| || | || ||| | |||||| Sbjct: 20 cggtggagacctaggcactcagag-acgaagaagggcgcagataccggcgatacgcttcg 78 Query: 78 gggagttgaaaataagcatagatccggagattcccaaataggtcaacct 126 ||||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 79 gggagctggcaacaagctttgatccggagattcccgaatagggcaacct 127
>gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3978 Score = 198 bits (100), Expect = 1e-47 Identities = 141/152 (92%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 412 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 471 Query: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 497 |||||||||||| ||||||||||| ||| |||||||| |||||||||||||||||||||| Sbjct: 472 taaatactcctgagtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaagaaccc 531 Query: 498 ccagtgggtagtgaaatagaacgtgaaaccgt 529 || || || ||||||||||||| ||||||||| Sbjct: 532 cc-gtagg-agtgaaatagaacatgaaaccgt 561 Score = 123 bits (62), Expect = 7e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 177 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 236 ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaataaagcaaaagcgattcccgtagtagcggcgag 218 Query: 237 cgaaatgggagcagcctaaacc 258 ||||| |||| ||||||||||| Sbjct: 219 cgaaacgggaacagcctaaacc 240 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 566 ctgaccgcgtgcctgttgaagaatgagccggcgact 601 |||||||||||||||||||||||||||||||||||| Sbjct: 593 ctgaccgcgtgcctgttgaagaatgagccggcgact 628
>gb|L42859.1|CRECPRGOL Chlamydomonas mutabilis chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmuI gene Length = 3744 Score = 198 bits (100), Expect = 1e-47 Identities = 197/226 (87%), Gaps = 10/226 (4%) Strand = Plus / Plus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 |||||||||||||| |||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 436 cccgagtagcatggaacacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 495 Query: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 497 |||||| ||||||||||||||||||||| |||||| | || |||||||||||||| |||| Sbjct: 496 taaatattcctgggtgaccgatagcgaaatagtactgcgaaggaaaggtgaaaagtaccc 555 Query: 498 ccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagggg 555 || |||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 556 ccgttggggagtgaaatagaacatgaaaccgtttgctga-----caagcagtgggagggt 610 Query: 556 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 601 | | || | |||||||||||||||||||||||||||||||||||| Sbjct: 611 aca--gaac-ctgaccgcgtgcctgttgaagaatgagccggcgact 653 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 173 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 232 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 216 Query: 233 cgagcgaaatgggagcagcctaaacc 258 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242
>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome Length = 203828 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Minus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 151990 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 151931 Query: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 497 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 151930 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 151871 Query: 498 ccagtgggtagtgaaatagaacgtgaaaccgt 529 | |||| ||||||||||||| ||||||||| Sbjct: 151870 ctgttggggagtgaaatagaacatgaaaccgt 151839 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 42213 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 42272 Query: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 497 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 42273 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 42332 Query: 498 ccagtgggtagtgaaatagaacgtgaaaccgt 529 | |||| ||||||||||||| ||||||||| Sbjct: 42333 ctgttggggagtgaaatagaacatgaaaccgt 42364 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 173 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 232 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 152206 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 152147 Query: 233 cgagcgaaatgggagcagcctaaacc 258 |||||||| |||| ||||||||||| Sbjct: 152146 cgagcgaaccgggaacagcctaaacc 152121 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 173 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 232 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 41997 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 42056 Query: 233 cgagcgaaatgggagcagcctaaacc 258 |||||||| |||| ||||||||||| Sbjct: 42057 cgagcgaaccgggaacagcctaaacc 42082 Score = 69.9 bits (35), Expect = 9e-09 Identities = 35/35 (100%) Strand = Plus / Minus Query: 567 tgaccgcgtgcctgttgaagaatgagccggcgact 601 ||||||||||||||||||||||||||||||||||| Sbjct: 151806 tgaccgcgtgcctgttgaagaatgagccggcgact 151772 Score = 69.9 bits (35), Expect = 9e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 567 tgaccgcgtgcctgttgaagaatgagccggcgact 601 ||||||||||||||||||||||||||||||||||| Sbjct: 42397 tgaccgcgtgcctgttgaagaatgagccggcgact 42431 Score = 44.1 bits (22), Expect = 0.53 Identities = 88/109 (80%), Gaps = 1/109 (0%) Strand = Plus / Minus Query: 18 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 77 ||||||| |||||||||| ||| | |||| |||||||| || | || ||| | |||||| Sbjct: 152361 cggtggagacctaggcactcagag-acgaagaagggcgcagataccggcgatacgcttcg 152303 Query: 78 gggagttgaaaataagcatagatccggagattcccaaataggtcaacct 126 ||||| || || |||| | |||||| |||||||| |||||| |||||| Sbjct: 152302 gggagctggcaacaagctttgatccgaagattcccgaatagggcaacct 152254 Score = 44.1 bits (22), Expect = 0.53 Identities = 88/109 (80%), Gaps = 1/109 (0%) Strand = Plus / Plus Query: 18 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 77 ||||||| |||||||||| ||| | |||| |||||||| || | || ||| | |||||| Sbjct: 41842 cggtggagacctaggcactcagag-acgaagaagggcgcagataccggcgatacgcttcg 41900 Query: 78 gggagttgaaaataagcatagatccggagattcccaaataggtcaacct 126 ||||| || || |||| | |||||| |||||||| |||||| |||||| Sbjct: 41901 gggagctggcaacaagctttgatccgaagattcccgaatagggcaacct 41949
>emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene, exon 1 Length = 2572 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 497 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 498 ccagtgggtagtgaaatagaacgtgaaaccgt 529 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 173 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 232 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 233 cgagcgaaatgggagcagcctaaacc 258 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 69.9 bits (35), Expect = 9e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 567 tgaccgcgtgcctgttgaagaatgagccggcgact 601 ||||||||||||||||||||||||||||||||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgact 669 Score = 52.0 bits (26), Expect = 0.002 Identities = 89/109 (81%), Gaps = 1/109 (0%) Strand = Plus / Plus Query: 18 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 77 ||||||| |||||||||| ||| | |||| |||||||| || | || ||| | |||||| Sbjct: 20 cggtggagacctaggcactcagag-acgaagaagggcgcagataccggcgatacgcttcg 78 Query: 78 gggagttgaaaataagcatagatccggagattcccaaataggtcaacct 126 ||||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 79 gggagctggcaacaagctttgatccggagattcccgaatagggcaacct 127
>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1 Length = 1285 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 497 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 498 ccagtgggtagtgaaatagaacgtgaaaccgt 529 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 7e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 173 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 232 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 233 cgagcgaaatgggagcagcctaaac 257 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 69.9 bits (35), Expect = 9e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 567 tgaccgcgtgcctgttgaagaatgagccggcgact 601 ||||||||||||||||||||||||||||||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgact 615 Score = 52.0 bits (26), Expect = 0.002 Identities = 89/109 (81%), Gaps = 1/109 (0%) Strand = Plus / Plus Query: 18 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 77 ||||||| |||||||||| ||| | |||| |||||||| || | || ||| | |||||| Sbjct: 20 cggtggagacctaggcactcagag-acgaagaagggcgcagataccggcgatacgcttcg 78 Query: 78 gggagttgaaaataagcatagatccggagattcccaaataggtcaacct 126 ||||| || || |||| | |||||| ||||||||||||||| |||||| Sbjct: 79 gggagctggcaacaagctttgatccgaagattcccaaatagggcaacct 127
>emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and 23S rRNA Length = 2603 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 385 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 444 Query: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 497 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 445 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 504 Query: 498 ccagtgggtagtgaaatagaacgtgaaaccgt 529 | |||| ||||||||||||| ||||||||| Sbjct: 505 ctgttggggagtgaaatagaacatgaaaccgt 536 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 173 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 232 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 169 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 228 Query: 233 cgagcgaaatgggagcagcctaaacc 258 |||||||| |||| ||||||||||| Sbjct: 229 cgagcgaaccgggaacagcctaaacc 254 Score = 69.9 bits (35), Expect = 9e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 567 tgaccgcgtgcctgttgaagaatgagccggcgact 601 ||||||||||||||||||||||||||||||||||| Sbjct: 569 tgaccgcgtgcctgttgaagaatgagccggcgact 603 Score = 44.1 bits (22), Expect = 0.53 Identities = 88/109 (80%), Gaps = 1/109 (0%) Strand = Plus / Plus Query: 18 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 77 ||||||| |||||||||| ||| | |||| |||||||| || | || ||| | |||||| Sbjct: 14 cggtggagacctaggcactcagag-acgaagaagggcgcagataccggcgatacgcttcg 72 Query: 78 gggagttgaaaataagcatagatccggagattcccaaataggtcaacct 126 ||||| || || |||| | |||||| |||||||| |||||| |||||| Sbjct: 73 gggagctggcaacaagctttgatccgaagattcccgaatagggcaacct 121
>gb|J01398.1|CRECPRG23 c.reinhardtii (algae) chloroplast 3s, 7s & 23s(5') rrna gene Length = 814 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 470 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 529 Query: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 497 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 530 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 589 Query: 498 ccagtgggtagtgaaatagaacgtgaaaccgt 529 | |||| ||||||||||||| ||||||||| Sbjct: 590 ctgttggggagtgaaatagaacatgaaaccgt 621 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 173 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 232 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 254 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 313 Query: 233 cgagcgaaatgggagcagcctaaacc 258 |||||||| |||| ||||||||||| Sbjct: 314 cgagcgaaccgggaacagcctaaacc 339 Score = 69.9 bits (35), Expect = 9e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 567 tgaccgcgtgcctgttgaagaatgagccggcgact 601 ||||||||||||||||||||||||||||||||||| Sbjct: 654 tgaccgcgtgcctgttgaagaatgagccggcgact 688 Score = 44.1 bits (22), Expect = 0.53 Identities = 88/109 (80%), Gaps = 1/109 (0%) Strand = Plus / Plus Query: 18 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 77 ||||||| |||||||||| ||| | |||| |||||||| || | || ||| | |||||| Sbjct: 99 cggtggagacctaggcactcagag-acgaagaagggcgcagataccggcgatacgcttcg 157 Query: 78 gggagttgaaaataagcatagatccggagattcccaaataggtcaacct 126 ||||| || || |||| | |||||| |||||||| |||||| |||||| Sbjct: 158 gggagctggcaacaagctttgatccgaagattcccgaatagggcaacct 206
>gb|L42986.1|RTCCPRGOLA Carteria lunzensis Length = 4448 Score = 196 bits (99), Expect = 6e-47 Identities = 199/225 (88%), Gaps = 8/225 (3%) Strand = Plus / Plus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 442 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 501 Query: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 496 |||||||||||||||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 502 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaatggttaaatagaacc 561 Query: 497 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 556 ||| || || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 562 ccc-gtagg-agtgaaatagaacatgaaaccgttc---gctgacaagcagtgggagggg- 615 Query: 557 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 601 ||| | |||||||||||||||||||||||||||||||||||| Sbjct: 616 gtttga-ccctgaccgcgtgcctgttgaagaatgagccggcgact 659 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 158 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 217 ||||| ||||| || ||| |||||||||||||||||| |||||||||||||||||||||| Sbjct: 141 aagaggcaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaaagcga 200 Query: 218 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 259 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 201 ttcccggagtagcggcgagcgaaacgggaacagcctaaaccg 242
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 497 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 498 ccagtgggtagtgaaatagaacgtgaaacc 527 | ||| ||||||||||||| ||||||| Sbjct: 491 ctgtaggggagtgaaatagaacatgaaacc 520 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 173 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 232 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 155 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 214 Query: 233 cgagcgaaatgggagcagcctaaacc 258 |||||||||||||| | ||||||||| Sbjct: 215 cgagcgaaatgggaacggcctaaacc 240 Score = 83.8 bits (42), Expect = 6e-13 Identities = 87/101 (86%), Gaps = 1/101 (0%) Strand = Plus / Plus Query: 26 acctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttg 85 |||||||||||||| | |||| ||||||||| | || |||||||| ||||||||||| || Sbjct: 9 acctaggcacccagag-acgatgaagggcgtggaaaccgacgaaacgcttcggggagctg 67 Query: 86 aaaataagcatagatccggagattcccaaataggtcaacct 126 ||| ||||| ||||||||||||||| |||||| |||||| Sbjct: 68 gaaacaagcaatgatccggagattcccgaatagggcaacct 108 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 566 ctgaccgcgtgcctgttgaagaatgagccggcgact 601 |||||||||||||||||||||||||||||||||||| Sbjct: 554 ctgaccgcgtgcctgttgaagaatgagccggcgact 589
>dbj|AP003265.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0490D09 Length = 154430 Score = 194 bits (98), Expect = 2e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 486 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 545 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 107567 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 107508 Query: 546 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 595 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107507 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 107458
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 25180 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 25239 Query: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 497 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 25240 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 25299 Query: 498 ccagtgggtagtgaaatagaacgtgaaacc 527 | ||| ||||||||||||| ||||||| Sbjct: 25300 ctgtaggggagtgaaatagaacatgaaacc 25329 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 173 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 232 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 24964 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 25023 Query: 233 cgagcgaaatgggagcagcctaaacc 258 |||||||||||||| ||||||||||| Sbjct: 25024 cgagcgaaatgggaacagcctaaacc 25049 Score = 75.8 bits (38), Expect = 1e-10 Identities = 90/105 (85%), Gaps = 2/105 (1%) Strand = Plus / Plus Query: 22 ggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgggga 81 ||||||||||||||| || | |||| ||||||||| | || |||||||| |||||||||| Sbjct: 24815 ggatacctaggcacctagag-acgatgaagggcgtgg-aaccgacgaaacgcttcgggga 24872 Query: 82 gttgaaaataagcatagatccggagattcccaaataggtcaacct 126 | || ||| ||||| ||||||||||||||| |||||| |||||| Sbjct: 24873 gctggaaacaagcaatgatccggagattcccgaatagggcaacct 24917 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 566 ctgaccgcgtgcctgttgaagaatgagccggcgact 601 |||||||||||||||||||||||||||||||||||| Sbjct: 25363 ctgaccgcgtgcctgttgaagaatgagccggcgact 25398
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 192 bits (97), Expect = 9e-46 Identities = 136/149 (91%) Strand = Plus / Plus Query: 381 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 440 ||||||||||||||||||| |||||||||||||||| | |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgtgaaatcccgtgtgaatcatcgaggaccacctcgaaaggctaa 60 Query: 441 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 500 ||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 61 atactcctgtgtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 501 gtgggtagtgaaatagaacgtgaaaccgt 529 | ||| ||||||||||||| ||||||||| Sbjct: 121 gaggggagtgaaatagaacatgaaaccgt 149 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 574 gtgcctgttgaagaatgagccggcgact 601 |||||||||||||||||||||||||||| Sbjct: 191 gtgcctgttgaagaatgagccggcgact 218
>gb|L42989.1|CRECPRGOLC Chlamydomonas humicola chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-ChuI gene Length = 4005 Score = 192 bits (97), Expect = 9e-46 Identities = 197/227 (86%), Gaps = 10/227 (4%) Strand = Plus / Plus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 438 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 496 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 497 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 554 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 555 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 601 | | | | |||||||||||||||||||||||||||||||||||| Sbjct: 578 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgact 622 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 177 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 236 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 178 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 237 Query: 237 cgaa 240 |||| Sbjct: 238 cgaa 241
>gb|L42988.1|CRECPRGOLB Chlamydomonas applanata large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2863 Score = 192 bits (97), Expect = 9e-46 Identities = 197/227 (86%), Gaps = 10/227 (4%) Strand = Plus / Plus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 384 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 443 Query: 438 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 496 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 444 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 503 Query: 497 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 554 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 504 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 558 Query: 555 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 601 | | | | |||||||||||||||||||||||||||||||||||| Sbjct: 559 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgact 603 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 177 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 236 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 218 Query: 237 cgaa 240 |||| Sbjct: 219 cgaa 222
>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2864 Score = 192 bits (97), Expect = 9e-46 Identities = 196/225 (87%), Gaps = 8/225 (3%) Strand = Plus / Plus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 506 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 565 Query: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 496 |||||||| ||| ||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 566 taaatactactgagtgaccgatagcgaaatagtaccgcgagggaacggttaaatagaacc 625 Query: 497 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 556 ||| || || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 626 ccc-gtagggagtgaaatagaacatgaaaccgttc---gctgacaagcagtgggaggggt 681 Query: 557 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 601 || | |||||||||||||||||||||||||||||||||||| Sbjct: 682 tag---accctgaccgcgtgcctgttgaagaatgagccggcgact 723 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 158 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 217 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 140 aagaggcaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaagcga 199 Query: 218 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 259 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 200 ttcccggagtagcggcgagcgaaaagggaacagcctaaaccg 241
>emb|X68921.1|CHCHRRNL1 Chloroplast Chlamydomonas humicola rrnL gene, exon 1 Length = 2524 Score = 192 bits (97), Expect = 9e-46 Identities = 197/227 (86%), Gaps = 10/227 (4%) Strand = Plus / Plus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 438 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 496 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 497 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 554 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 555 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 601 | | | | |||||||||||||||||||||||||||||||||||| Sbjct: 578 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgact 622 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 177 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 236 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 178 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 237 Query: 237 cgaa 240 |||| Sbjct: 238 cgaa 241
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 190 bits (96), Expect = 4e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 497 ||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 aaaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 498 ccagtgggtagtgaaatagaacgtgaaaccgt 529 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 173 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 232 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 216 Query: 233 cgagcgaaatgggagcagcctaaacc 258 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242 Score = 69.9 bits (35), Expect = 9e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 567 tgaccgcgtgcctgttgaagaatgagccggcgact 601 ||||||||||||||||||||||||||||||||||| Sbjct: 578 tgaccgcgtgcctgttgaagaatgagccggcgact 612 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Plus Query: 72 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 126 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 55 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacct 109
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 190 bits (96), Expect = 4e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 402 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 461 Query: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 497 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 462 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 521 Query: 498 ccagtgggtagtgaaatagaacgtgaaaccgt 529 | |||| ||||||||||||| ||||||||| Sbjct: 522 ctgttggggagtgaaatagaacatgaaaccgt 553 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 173 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 232 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 233 cgagcgaaatgggagcagcctaaacc 258 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 567 tgaccgcgtgcctgttgaagaatgagccggcgact 601 |||| |||||||||||||||||||||||||||||| Sbjct: 586 tgactgcgtgcctgttgaagaatgagccggcgact 620 Score = 44.1 bits (22), Expect = 0.53 Identities = 88/109 (80%), Gaps = 1/109 (0%) Strand = Plus / Plus Query: 18 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 77 ||||||| |||||||||| ||| | |||| |||||||| || | || ||| | |||||| Sbjct: 20 cggtggagacctaggcactcagag-acgaagaagggcgcagataccggcgatacgcttcg 78 Query: 78 gggagttgaaaataagcatagatccggagattcccaaataggtcaacct 126 ||||| || || |||| | |||||| |||||||| |||||| |||||| Sbjct: 79 gggagctggcaacaagctttgatccgaagattcccgaatagggcaacct 127
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 188 bits (95), Expect = 1e-44 Identities = 190/221 (85%), Gaps = 3/221 (1%) Strand = Plus / Plus Query: 381 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 440 ||||||||||||||||| |||||||| ||||||||||| |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgaggaatcccatgtgaatcagcgaggaccacctcgtaaggctaa 60 Query: 441 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 500 ||||| ||| ||||||||||| ||| ||||||| ||||||||||||||||||||||| Sbjct: 61 atactactgtgtgaccgatagtgaaccagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 501 gtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagt 560 ||| ||||||||||||| |||||||| | |||| |||||||||||||| | | Sbjct: 121 aaggggagtgaaatagaacatgaaaccg---ttagcttacaagcagtgggaggactattt 177 Query: 561 gatctctgaccgcgtgcctgttgaagaatgagccggcgact 601 | ||||||||||||||||||||||||||||||||||||| Sbjct: 178 aaagtctgaccgcgtgcctgttgaagaatgagccggcgact 218
>gb|L43352.1|CRECPRRNLC Chlamydomonas frankii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 6750 Score = 188 bits (95), Expect = 1e-44 Identities = 195/226 (86%), Gaps = 8/226 (3%) Strand = Plus / Plus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 497 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 498 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg--g 555 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 556 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 601 ||| || |||||||||||||| ||||||||||||||||||||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgact 606 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 173 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 232 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 233 cgagcgaaatgggagcagcctaaacc 258 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261
>emb|X68905.1|CHCFRRNL1 Chloroplast Chlamydomonas frankii rrnL gene, exon 1 Length = 1282 Score = 188 bits (95), Expect = 1e-44 Identities = 195/226 (86%), Gaps = 8/226 (3%) Strand = Plus / Plus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 497 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 498 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg--g 555 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 556 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 601 ||| || |||||||||||||| ||||||||||||||||||||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgact 606 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 173 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 232 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 233 cgagcgaaatgggagcagcctaaacc 258 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Minus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 171123 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 171064 Query: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 497 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 171063 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 171004 Query: 498 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 553 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 171003 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 170951 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 121803 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 121862 Query: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 497 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 121863 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 121922 Query: 498 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 553 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 121923 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 121975 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Minus Query: 159 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 218 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 171357 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 171298 Query: 219 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 259 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 171297 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 171257 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 159 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 218 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 121569 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 121628 Query: 219 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 259 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 121629 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 121669 Score = 81.8 bits (41), Expect = 2e-12 Identities = 92/108 (85%), Gaps = 1/108 (0%) Strand = Plus / Minus Query: 19 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 78 ||||||||||||||||||||| | |||| |||||||||||||| |||||||| || ||| Sbjct: 171496 ggtggatacctaggcacccagag-acgaagaagggcgtagcaaccgacgaaaccctccgg 171438 Query: 79 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 126 |||| || || |||| ||||||||||||||| |||||| |||||| Sbjct: 171437 ggagctggaagcaagctctgatccggagattcccgaatagggcaacct 171390 Score = 81.8 bits (41), Expect = 2e-12 Identities = 92/108 (85%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 78 ||||||||||||||||||||| | |||| |||||||||||||| |||||||| || ||| Sbjct: 121430 ggtggatacctaggcacccagag-acgaagaagggcgtagcaaccgacgaaaccctccgg 121488 Query: 79 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 126 |||| || || |||| ||||||||||||||| |||||| |||||| Sbjct: 121489 ggagctggaagcaagctctgatccggagattcccgaatagggcaacct 121536 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Minus Query: 566 ctgaccgcgtgcctgttgaagaatgagccggcgact 601 |||||||||||||||||||||||||||||||||||| Sbjct: 170941 ctgaccgcgtgcctgttgaagaatgagccggcgact 170906 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 566 ctgaccgcgtgcctgttgaagaatgagccggcgact 601 |||||||||||||||||||||||||||||||||||| Sbjct: 121985 ctgaccgcgtgcctgttgaagaatgagccggcgact 122020
>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome Length = 161452 Score = 186 bits (94), Expect = 6e-44 Identities = 195/226 (86%), Gaps = 12/226 (5%) Strand = Plus / Minus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 155833 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 155774 Query: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 496 |||||||||||| ||||||||||| |||| ||||| | || |||||||||||| |||||| Sbjct: 155773 taaatactcctgagtgaccgatagtgaagaagtacagcgatggaaaggtgaaatagaacc 155714 Query: 497 cccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 555 ||| || ||| ||||||| ||||| |||||||| | |||| |||||||||||||| Sbjct: 155713 ccctgtcggggagtgaaagagaacatgaaaccg---taagctgacaagcagtgggaggat 155657 Query: 556 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 601 || ||||||||||||||||||||||||||||||||||||| Sbjct: 155656 aa-------tctgaccgcgtgcctgttgaagaatgagccggcgact 155618 Score = 186 bits (94), Expect = 6e-44 Identities = 195/226 (86%), Gaps = 12/226 (5%) Strand = Plus / Plus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 78059 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 78118 Query: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 496 |||||||||||| ||||||||||| |||| ||||| | || |||||||||||| |||||| Sbjct: 78119 taaatactcctgagtgaccgatagtgaagaagtacagcgatggaaaggtgaaatagaacc 78178 Query: 497 cccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 555 ||| || ||| ||||||| ||||| |||||||| | |||| |||||||||||||| Sbjct: 78179 ccctgtcggggagtgaaagagaacatgaaaccg---taagctgacaagcagtgggaggat 78235 Query: 556 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 601 || ||||||||||||||||||||||||||||||||||||| Sbjct: 78236 aa-------tctgaccgcgtgcctgttgaagaatgagccggcgact 78274 Score = 145 bits (73), Expect = 2e-31 Identities = 94/101 (93%) Strand = Plus / Minus Query: 158 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 217 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 156138 aagaggcaacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcga 156079 Query: 218 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 258 |||||| |||||||||||||||||||||| ||||||||||| Sbjct: 156078 ttcccggagtagcggcgagcgaaatgggaacagcctaaacc 156038 Score = 145 bits (73), Expect = 2e-31 Identities = 94/101 (93%) Strand = Plus / Plus Query: 158 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 217 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 77754 aagaggcaacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcga 77813 Query: 218 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 258 |||||| |||||||||||||||||||||| ||||||||||| Sbjct: 77814 ttcccggagtagcggcgagcgaaatgggaacagcctaaacc 77854 Score = 54.0 bits (27), Expect = 5e-04 Identities = 102/126 (80%), Gaps = 1/126 (0%) Strand = Plus / Minus Query: 7 acgagggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgac 66 |||| ||||| ||||||| |||||||||| ||| | |||| |||||||| || | || | Sbjct: 156291 acgaaggcttacggtggagacctaggcactcagag-acgatgaagggcgcagataccggc 156233 Query: 67 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 126 || | ||||||||||| || || |||||| |||||| |||| ||| |||||| |||||| Sbjct: 156232 gatacgcttcggggagctggtaacaagcatcgatccgaagatccccgaatagggcaacct 156173 Query: 127 tttaaa 132 ||||| Sbjct: 156172 cttaaa 156167 Score = 54.0 bits (27), Expect = 5e-04 Identities = 102/126 (80%), Gaps = 1/126 (0%) Strand = Plus / Plus Query: 7 acgagggcttgcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgac 66 |||| ||||| ||||||| |||||||||| ||| | |||| |||||||| || | || | Sbjct: 77601 acgaaggcttacggtggagacctaggcactcagag-acgatgaagggcgcagataccggc 77659 Query: 67 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 126 || | ||||||||||| || || |||||| |||||| |||| ||| |||||| |||||| Sbjct: 77660 gatacgcttcggggagctggtaacaagcatcgatccgaagatccccgaatagggcaacct 77719 Query: 127 tttaaa 132 ||||| Sbjct: 77720 cttaaa 77725
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 453 Query: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 497 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 454 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 513 Query: 498 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 553 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 514 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 566 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 159 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 218 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 160 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 219 Query: 219 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 259 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 220 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 260 Score = 81.8 bits (41), Expect = 2e-12 Identities = 92/108 (85%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 78 ||||||||||||||||||||| | |||| |||||||||||||| |||||||| || ||| Sbjct: 21 ggtggatacctaggcacccagag-acgaagaagggcgtagcaaccgacgaaaccctccgg 79 Query: 79 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 126 |||| || || |||| ||||||||||||||| |||||| |||||| Sbjct: 80 ggagctggaagcaagctctgatccggagattcccgaatagggcaacct 127 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 566 ctgaccgcgtgcctgttgaagaatgagccggcgact 601 |||||||||||||||||||||||||||||||||||| Sbjct: 576 ctgaccgcgtgcctgttgaagaatgagccggcgact 611
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 184 bits (93), Expect = 2e-43 Identities = 139/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||||| Sbjct: 446 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaaggc 505 Query: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaacc 496 |||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||| || Sbjct: 506 taaatactcctgagtgaccgatagcgaactagtaccgtgagggaaaggtgaaaaagatcc 565 Query: 497 cccagtgggtagtgaaatagaacgtgaaaccgt 529 ||| ||| ||||||||||||| ||||||||| Sbjct: 566 cccgtagggaagtgaaatagaacatgaaaccgt 598 Score = 137 bits (69), Expect = 5e-29 Identities = 201/242 (83%), Gaps = 3/242 (1%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 78 || ||| |||||||||| ||| | |||| ||||||||| | || |||||||| ||||||| Sbjct: 10 ggyggagacctaggcactcagag-acgatgaagggcgtggtaaccgacgaaacgcttcgg 68 Query: 79 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 138 |||| || | | ||| | |||||| |||||||| |||||| |||||| || ||| | | Sbjct: 69 ggagctggatacgagctttgatccgaagattcccgaatagggcaacctcttggactcctt 128 Query: 139 gctgaatccatgagc-aggcaagagacaacctggcgaactgaaacatcttagtagccaga 197 ||||| ||| ||| | | |||||| |||| || ||| ||||||||||||||| || || Sbjct: 129 agtgaattcat-agctaagaaagagataacccggtgaattgaaacatcttagtaaccgga 187 Query: 198 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 257 ||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 188 ggaaaagaaagcaaacgcgattcccttagtagcggcgagcgaaatgggaacagcctaaac 247 Query: 258 cg 259 || Sbjct: 248 cg 249 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 566 ctgaccgcgtgcctgttgaagaatgagccggcgact 601 |||||||||||||||||||||||||||||||||||| Sbjct: 629 ctgaccgcgtgcctgttgaagaatgagccggcgact 664
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 182 bits (92), Expect = 9e-43 Identities = 137/152 (90%) Strand = Plus / Plus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||| | Sbjct: 371 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaagac 430 Query: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 497 |||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 498 ccagtgggtagtgaaatagaacgtgaaaccgt 529 ||| ||| ||||||||||| | ||||||||| Sbjct: 491 ccataggggagtgaaatagatcatgaaaccgt 522 Score = 159 bits (80), Expect = 1e-35 Identities = 179/212 (84%) Strand = Plus / Plus Query: 48 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 107 ||||||||||| | |||||| | ||||||||||| || || |||| | |||||| ||| Sbjct: 38 gaagggcgtagttaccgacgatacgcttcggggagctggaatcaagctttgatccgaaga 97 Query: 108 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 167 ||||| |||||| ||||||| || ||| |||| ||||| ||| |||| |||||||||| Sbjct: 98 ttcccgaatagggcaaccttatatacttcctgttgaattcatagacaggtaagagacaac 157 Query: 168 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 227 | |||||| |||||||||||||||||| | ||||||||||||||| ||||||||| |||| Sbjct: 158 ccggcgaattgaaacatcttagtagccggtggaaaagaaagcaaacgcgattcccttagt 217 Query: 228 agcggcgagcgaaatgggagcagcctaaaccg 259 || ||||||||||| |||| ||| |||||||| Sbjct: 218 agtggcgagcgaaaagggatcagtctaaaccg 249 Score = 73.8 bits (37), Expect = 6e-10 Identities = 37/37 (100%) Strand = Plus / Plus Query: 565 tctgaccgcgtgcctgttgaagaatgagccggcgact 601 ||||||||||||||||||||||||||||||||||||| Sbjct: 556 tctgaccgcgtgcctgttgaagaatgagccggcgact 592
>gb|L42984.1|ANKCPRGOL Ankistrodesmus stipitatus chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-AstI gene Length = 4859 Score = 178 bits (90), Expect = 1e-41 Identities = 198/228 (86%), Gaps = 12/228 (5%) Strand = Plus / Plus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 |||||||||||||||||||||||||||||||||||||| || |||||||||| | ||||| Sbjct: 383 cccgagtagcatggggcacgtggaatcccgtgtgaatctgcgaggaccacctcgtaaggc 442 Query: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 496 ||||||||| | |||||||||||||||| |||||| |||| |||||| ||||| |||||| Sbjct: 443 taaatactcttaggtgaccgatagcgaaatagtacagtgatggaaagttgaaagagaacc 502 Query: 497 ccc-agtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagg 553 ||| ||| ||||||||||||| |||||||| |||||| |||||||||||||| Sbjct: 503 cccttaaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggagg 557 Query: 554 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 601 | ||| || |||||||||||||||||||||||||||||||||||| Sbjct: 558 gtttagt--tc-ctgaccgcgtgcctgttgaagaatgagccggcgact 602 Score = 113 bits (57), Expect = 7e-22 Identities = 160/193 (82%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 66 cgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacc 125 ||||| ||||||||||| || || |||||| |||||| |||| ||| |||||| ||||| Sbjct: 49 cgaaacgcttcggggagctggcaacaagcatcgatccgaagatccccgaatagggcaacc 108 Query: 126 tttta-aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 184 | ||| ||||||| |||||| ||| | || |||| |||| ||||| |||||||| Sbjct: 109 tcttagaactgcccactgaattcataggtgggtcagaggcaactcagcgaattgaaacat 168 Query: 185 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 244 ||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 169 cttagtagctgaaggaaaagaaagcaaaagcgattcccaaagtagcggcgagcggaatgg 228 Query: 245 gagcagcctaaac 257 || |||||||||| Sbjct: 229 gaacagcctaaac 241
>gb|L49148.1|CRECPRGOLF Chlamydomonas mexicana chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4181 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 497 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 498 ccagtgggtagtgaaatagaacgtgaaacc 527 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 97.6 bits (49), Expect = 4e-17 Identities = 193/240 (80%), Gaps = 1/240 (0%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 78 |||||| |||||||||| ||| | |||| |||||||| || | || ||| | ||||||| Sbjct: 21 ggtggagacctaggcactcagag-acgatgaagggcgcagataccggcgatacgcttcgg 79 Query: 79 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 138 |||| || || |||| | ||||||||||||||| |||||| |||||| | ||||| ||| Sbjct: 80 ggagctggcaacaagctttgatccggagattcccgaatagggcaacctataaaactacct 139 Query: 139 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 198 ||| ||| ||| ||||| ||||| | |||||||||||||| |||||| ||| Sbjct: 140 atataattcatagttaggaaagaggcaacccagtgaactgaaacatctaagtagctggag 199 Query: 199 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 258 |||||||||||||| |||||||||||||||| ||||| |||| |||| |||||||||| Sbjct: 200 gaaaagaaagcaaacgcgattcccgtagtagtggcgaacgaaccgggattagcctaaacc 259 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 566 ctgaccgcgtgcctgttgaagaatgagccggcgact 601 |||||||||||||||||||||||||||||||||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgact 617
>gb|DQ313084.1| Uncultured bacterium clone 3R3F 23S ribosomal RNA gene, partial sequence Length = 629 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 ||||||||||||||| |||| | |||||||||||||||||| |||||||||| | ||||| Sbjct: 243 cccgagtagcatgggacacgagaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 302 Query: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 497 ||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 303 taaatactcttaggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 362 Query: 498 ccagtgggtagtgaaatagaacgtgaaacc 527 | ||| ||||||||||||| ||||||| Sbjct: 363 ctgtaggggagtgaaatagaacatgaaacc 392 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 173 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 232 ||||||||||||||||||||| ||||| |||||||||| |||||||||| ||||| || Sbjct: 8 gaactgaaacatcttagtagctgaaggaagagaaagcaaacgcgattcccggagtagtgg 67 Query: 233 cgagcgaaatgggagcagcctaaacc 258 |||||||||||||| ||||||||||| Sbjct: 68 cgagcgaaatgggaacagcctaaacc 93 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 566 ctgaccgcgtgcctgttgaagaatgagccggcgact 601 |||||||||| |||||||||||||| |||||||||| Sbjct: 426 ctgaccgcgtacctgttgaagaatgggccggcgact 461
>emb|X68910.1|CHCMRRNL1 Chloroplast Chlamydomonas mexicana rrnL gene, exon 1 Length = 1965 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 497 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 498 ccagtgggtagtgaaatagaacgtgaaacc 527 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 97.6 bits (49), Expect = 4e-17 Identities = 193/240 (80%), Gaps = 1/240 (0%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 78 |||||| |||||||||| ||| | |||| |||||||| || | || ||| | ||||||| Sbjct: 21 ggtggagacctaggcactcagag-acgatgaagggcgcagataccggcgatacgcttcgg 79 Query: 79 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 138 |||| || || |||| | ||||||||||||||| |||||| |||||| | ||||| ||| Sbjct: 80 ggagctggcaacaagctttgatccggagattcccgaatagggcaacctataaaactacct 139 Query: 139 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 198 ||| ||| ||| ||||| ||||| | |||||||||||||| |||||| ||| Sbjct: 140 atataattcatagttaggaaagaggcaacccagtgaactgaaacatctaagtagctggag 199 Query: 199 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 258 |||||||||||||| |||||||||||||||| ||||| |||| |||| |||||||||| Sbjct: 200 gaaaagaaagcaaacgcgattcccgtagtagtggcgaacgaaccgggattagcctaaacc 259 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 566 ctgaccgcgtgcctgttgaagaatgagccggcgact 601 |||||||||||||||||||||||||||||||||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgact 617
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 176 bits (89), Expect = 5e-41 Identities = 134/149 (89%) Strand = Plus / Plus Query: 381 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 440 ||||||||||||||| ||| |||||| ||||||||||| || |||| || | |||||||| Sbjct: 1 gagtagcatggggcaggtgaaatcccatgtgaatcagcgagaaccatctcgtaaggctaa 60 Query: 441 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 500 ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 61 atactcctgtgtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaaccccga 120 Query: 501 gtgggtagtgaaatagaacgtgaaaccgt 529 ||| ||||||||||||| ||||||||| Sbjct: 121 aaggggagtgaaatagaacatgaaaccgt 149 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 565 tctgaccgcgtgcctgttgaagaatgagccggcga 599 |||||||| |||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcga 216
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 176 bits (89), Expect = 5e-41 Identities = 138/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 527 cccgagtagcatggggcacgtgaaatcccgtgtgaatccacgaggaccacctcgtaaggc 586 Query: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 497 |||||||||||||||||||||||| ||| |||||||| |||||||||||||||| | || Sbjct: 587 taaatactcctgggtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaaagaacc 646 Query: 498 ccagt-gggtagtgaaatagaacgtgaaaccgt 529 ||||| ||| ||||||||||||| ||||||||| Sbjct: 647 ccagtcggggagtgaaatagaacatgaaaccgt 679 Score = 147 bits (74), Expect = 5e-32 Identities = 95/102 (93%) Strand = Plus / Plus Query: 158 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 217 ||||||||||| || ||| |||||||||||||||||| ||||||||||||||||| |||| Sbjct: 148 aagagacaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcga 207 Query: 218 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 259 ||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 208 ttcccgtagtagcggcgagcgaactgggaacagcctaaaccg 249 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 567 tgaccgcgtgcctgttgaagaatgagccggcgact 601 ||||||| ||||||||||||||||||||||||||| Sbjct: 714 tgaccgcatgcctgttgaagaatgagccggcgact 748 Score = 61.9 bits (31), Expect = 2e-06 Identities = 89/108 (82%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 19 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 78 || ||| |||||||||||||| | |||| ||||||||| | || |||||||| ||||||| Sbjct: 10 ggyggagacctaggcacccagag-acgaagaagggcgtggaaaccgacgaaacgcttcgg 68 Query: 79 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 126 | || || ||| |||| |||||| |||||||| |||||| |||||| Sbjct: 69 gaagctggaaacaagctatgatccgaagattcccgaatagggcaacct 116
>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 497 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 498 ccagtgggtagtgaaatagaacgtgaaaccgtg 530 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 171 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 230 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 231 ggcgagcgaaatgggagcagcctaaacc 258 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 567 tgaccgcgtgcctgttgaagaatgagccggcgact 601 |||||| |||||||||||||||||||||||||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgact 439
>gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 497 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 498 ccagtgggtagtgaaatagaacgtgaaaccgtg 530 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 171 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 230 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 231 ggcgagcgaaatgggagcagcctaaacc 258 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 567 tgaccgcgtgcctgttgaagaatgagccggcgact 601 |||||| |||||||||||||||||||||||||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgact 439
>gb|DQ312972.1| Uncultured bacterium clone 3N4D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 497 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 498 ccagtgggtagtgaaatagaacgtgaaaccgtg 530 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 73.8 bits (37), Expect = 6e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 174 aactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggc 233 |||||||||||||||||||| ||||||| ||||| |||| ||| |||| ||||||||| Sbjct: 22 aactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagcggc 81 Query: 234 gagcgaaatgggagcagcctaaacc 258 ||||||| |||| |||||||||| Sbjct: 82 gagcgaacggggaagagcctaaacc 106 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 567 tgaccgcgtgcctgttgaagaatgagccggcgact 601 |||||| |||||||||||||||||||||||||||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgact 452
>gb|DQ312883.1| Uncultured bacterium clone 3K4C 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 497 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 498 ccagtgggtagtgaaatagaacgtgaaaccgtg 530 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 171 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 230 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 231 ggcgagcgaaatgggagcagcctaaacc 258 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 567 tgaccgcgtgcctgttgaagaatgagccggcgact 601 |||||| |||||||||||||||||||||||||||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgact 452
>gb|DQ312801.1| Uncultured bacterium clone 3H5F 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 497 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 498 ccagtgggtagtgaaatagaacgtgaaaccgtg 530 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 171 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 230 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 231 ggcgagcgaaatgggagcagcctaaacc 258 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 567 tgaccgcgtgcctgttgaagaatgagccggcgact 601 |||||| |||||||||||||||||||||||||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgact 439
>gb|DQ312666.1| Uncultured bacterium clone 3D4G 23S ribosomal RNA gene, partial sequence Length = 806 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 497 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 498 ccagtgggtagtgaaatagaacgtgaaaccgtg 530 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 171 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 230 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 231 ggcgagcgaaatgggagcagcctaaacc 258 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 567 tgaccgcgtgcctgttgaagaatgagccggcgact 601 |||||| |||||||||||||||||||||||||||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgact 452
>gb|DQ312593.1| Uncultured bacterium clone 3B8B 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 497 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 498 ccagtgggtagtgaaatagaacgtgaaaccgtg 530 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 171 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 230 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 231 ggcgagcgaaatgggagcagcctaaacc 258 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 567 tgaccgcgtgcctgttgaagaatgagccggcgact 601 |||||| |||||||||||||||||||||||||||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgact 452
>gb|DQ312550.1| Uncultured bacterium clone 3B11D 23S ribosomal RNA gene, partial sequence Length = 806 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 497 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 498 ccagtgggtagtgaaatagaacgtgaaaccgtg 530 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 171 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 230 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 231 ggcgagcgaaatgggagcagcctaaacc 258 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 567 tgaccgcgtgcctgttgaagaatgagccggcgact 601 |||||| |||||||||||||||||||||||||||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgact 452
>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3397 Score = 176 bits (89), Expect = 5e-41 Identities = 194/225 (86%), Gaps = 8/225 (3%) Strand = Plus / Plus Query: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 567 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 626 Query: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 497 |||||||||||||||||||||||| | | ||||||| ||||||| ||||| |||||||| Sbjct: 627 taaatactcctgggtgaccgatagtgcaa-agtaccgcgagggaatggtgataagaaccc 685 Query: 498 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 557 | ||| ||||||||||||| |||||||| | |||| ||||||||||||| | Sbjct: 686 ctgtaggggagtgaaatagaacatgaaaccg---taagctgacaagcagtgggagc---a 739 Query: 558 agtgatctc-tgaccgcgtgcctgttgaagaatgagccggcgact 601 ||| | || ||||||||||||||||||||||||||||||||||| Sbjct: 740 agttaacttgtgaccgcgtgcctgttgaagaatgagccggcgact 784 Score = 119 bits (60), Expect = 1e-23 Identities = 90/100 (90%) Strand = Plus / Plus Query: 159 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 218 |||||||||| | ||| ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 140 agagacaacccagtgaattgaaacatcttagtagctggaggaaaagaaagcaaacgcgat 199 Query: 219 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 258 |||||||||||||||||||||| |||| ||||||||||| Sbjct: 200 tcccgtagtagcggcgagcgaaccgggatcagcctaaacc 239
>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2604 Score = 176 bits (89), Expect = 5e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 377 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 436 ||||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||| Sbjct: 365 acccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaagg 424 Query: 437 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 496 |||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 425 ctaaatactcctggatgaccgatagcgaactagtaccgtgagggaagggtgaaaagaacc 484 Query: 497 c 497 | Sbjct: 485 c 485 Score = 135 bits (68), Expect = 2e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 164 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 223 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 150 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 209 Query: 224 tagtagcggcgagcgaaatgggagcagcctaaaccg 259 |||||||||||||||| |||| |||||||||||| Sbjct: 210 cagtagcggcgagcgaagagggaacagcctaaaccg 245 Score = 79.8 bits (40), Expect = 1e-11 Identities = 40/40 (100%) Strand = Plus / Plus Query: 566 ctgaccgcgtgcctgttgaagaatgagccggcgactcata 605 |||||||||||||||||||||||||||||||||||||||| Sbjct: 551 ctgaccgcgtgcctgttgaagaatgagccggcgactcata 590 Score = 44.1 bits (22), Expect = 0.53 Identities = 43/50 (86%) Strand = Plus / Plus Query: 300 gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 349 ||||| |||||||||||||| ||||||| |||||| | |||||||||| Sbjct: 287 gctagacgaagcggttgagttccgcaccgcagatggtgagagtccagtag 336 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,054,344 Number of Sequences: 3902068 Number of extensions: 4054344 Number of successful extensions: 121329 Number of sequences better than 10.0: 26622 Number of HSP's better than 10.0 without gapping: 26449 Number of HSP's successfully gapped in prelim test: 208 Number of HSP's that attempted gapping in prelim test: 76713 Number of HSP's gapped (non-prelim): 42394 length of query: 605 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 582 effective length of database: 17,143,297,704 effective search space: 9977399263728 effective search space used: 9977399263728 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
