Clone Name	basd19a19
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	GRP7_ARATH (Q03250) Glycine-rich RNA-binding protein 7	87	7e-18
2	GRP1_SINAL (P49310) Glycine-rich RNA-binding protein GRP1A	84	3e-17
3	GRP1_DAUCA (Q03878) Glycine-rich RNA-binding protein	84	6e-17
4	GRP2_SINAL (P49311) Glycine-rich RNA-binding protein GRP2A	83	8e-17
5	GRPA_MAIZE (P10979) Glycine-rich RNA-binding, abscisic acid-indu...	84	1e-16
6	GRP8_ARATH (Q03251) Glycine-rich RNA-binding protein 8 (CCR1 pro...	82	2e-16
7	GRP1_SORBI (Q99069) Glycine-rich RNA-binding protein 1 (Fragment)	81	5e-16
8	GRP2_SORBI (Q99070) Glycine-rich RNA-binding protein 2	80	1e-15
9	GRP10_BRANA (Q05966) Glycine-rich RNA-binding protein 10	77	9e-15
10	GRP2_ARATH (Q9SVM8) Glycine-rich RNA-binding protein 2, mitochon...	67	1e-11
11	ROC2_NICSY (Q08937) 29 kDa ribonucleoprotein B, chloroplast prec...	66	2e-11
12	ROC2_NICPL (P49314) 31 kDa ribonucleoprotein, chloroplast precur...	65	5e-11
13	ROC1_SPIOL (P28644) 28 kDa ribonucleoprotein, chloroplast (28RNP)	64	8e-11
14	ROC1_NICSY (Q08935) 29 kDa ribonucleoprotein A, chloroplast prec...	64	1e-10
15	ROC1_NICPL (P49313) 30 kDa ribonucleoprotein, chloroplast precur...	64	1e-10
16	ROC4_NICSY (P19683) 31 kDa ribonucleoprotein, chloroplast precursor	63	2e-10
17	ROC2_ARATH (Q43349) 29 kDa ribonucleoprotein, chloroplast precur...	63	2e-10
18	ROC3_ARATH (Q04836) 31 kDa ribonucleoprotein, chloroplast precur...	62	4e-10
19	RT19_ARATH (P39697) 40S ribosomal protein S19, mitochondrial pre...	62	5e-10
20	ROC3_NICSY (P19682) 28 kDa ribonucleoprotein, chloroplast precur...	61	7e-10
21	ROC1_ARATH (Q9ZUU4) Putative ribonucleoprotein At2g37220, chloro...	60	1e-09
22	CIRBP_PONPY (Q5RF83) Cold-inducible RNA-binding protein (Glycine...	60	2e-09
23	CIRBP_HUMAN (Q14011) Cold-inducible RNA-binding protein (Glycine...	60	2e-09
24	CIRBP_RAT (P60825) Cold-inducible RNA-binding protein (Glycine-r...	59	3e-09
25	CIRBP_MOUSE (P60824) Cold-inducible RNA-binding protein (Glycine...	59	3e-09
26	CIRBP_CRIGR (P60826) Cold-inducible RNA-binding protein (Glycine...	59	3e-09
27	CIRBP_XENLA (O93235) Cold-inducible RNA-binding protein (Glycine...	58	6e-09
28	RBM3_MOUSE (O89086) Putative RNA-binding protein 3 (RNA-binding ...	58	8e-09
29	RBM3_HUMAN (P98179) Putative RNA-binding protein 3 (RNA-binding ...	57	1e-08
30	ROC5_NICSY (P19684) 33 kDa ribonucleoprotein, chloroplast precursor	56	3e-08
31	PABP_YEAST (P04147) Polyadenylate-binding protein, cytoplasmic a...	55	6e-08
32	HNRPG_HUMAN (P38159) Heterogeneous nuclear ribonucleoprotein G (...	54	1e-07
33	HNRPG_RAT (P84586) Heterogeneous nuclear ribonucleoprotein G (hn...	52	4e-07
34	PABPA_XENLA (P20965) Polyadenylate-binding protein 1-A (Poly(A)-...	52	5e-07
35	PABP1_HUMAN (P11940) Polyadenylate-binding protein 1 (Poly(A)-bi...	51	7e-07
36	PABP1_BOVIN (P61286) Polyadenylate-binding protein 1 (Poly(A)-bi...	51	7e-07
37	PABP3_HUMAN (Q9H361) Polyadenylate-binding protein 3 (Poly(A)-bi...	51	7e-07
38	PUB1_YEAST (P32588) Nuclear and cytoplasmic polyadenylated RNA-b...	51	7e-07
39	PABP1_RAT (Q9EPH8) Polyadenylate-binding protein 1 (Poly(A)-bind...	51	9e-07
40	PABP1_MOUSE (P29341) Polyadenylate-binding protein 1 (Poly(A)-bi...	51	9e-07
41	HNRPG_MOUSE (O35479) Heterogeneous nuclear ribonucleoprotein G (...	51	9e-07
42	TRA2B_RAT (P62997) Arginine/serine-rich splicing factor 10 (Tran...	50	1e-06
43	TRA2B_MOUSE (P62996) Arginine/serine-rich splicing factor 10 (Tr...	50	1e-06
44	TRA2B_HUMAN (P62995) Arginine/serine-rich splicing factor 10 (Tr...	50	1e-06
45	RNPC2_MOUSE (Q8VH51) RNA-binding region-containing protein 2 (Co...	50	1e-06
46	RNPC2_HUMAN (Q14498) RNA-binding region-containing protein 2 (He...	50	1e-06
47	RBM23_HUMAN (Q86U06) Probable RNA-binding protein 23 (RNA-bindin...	50	2e-06
48	TRA2A_MOUSE (Q6PFR5) Transformer-2 protein homolog (TRA-2 alpha)	50	2e-06
49	PABPB_XENLA (Q6IP09) Polyadenylate-binding protein 1-B (Poly(A)-...	50	2e-06
50	TRA2A_HUMAN (Q13595) Transformer-2 protein homolog (TRA-2 alpha)	50	2e-06
51	SF3B4_HUMAN (Q15427) Splicing factor 3B subunit 4 (Spliceosome-a...	49	3e-06
52	EPAB_XENTR (Q6DEY7) Embryonic polyadenylate-binding protein (Emb...	49	3e-06
53	HNRPD_RAT (Q9JJ54) Heterogeneous nuclear ribonucleoprotein D0 (h...	49	3e-06
54	PABP5_ARATH (Q05196) Polyadenylate-binding protein 5 (Poly(A)-bi...	49	4e-06
55	RNPC1_HUMAN (Q9H0Z9) RNA-binding region-containing protein 1 (HS...	49	4e-06
56	PABP2_ARATH (P42731) Polyadenylate-binding protein 2 (Poly(A)-bi...	49	5e-06
57	PABP_DROME (P21187) Polyadenylate-binding protein (Poly(A)-bindi...	49	5e-06
58	RBPA_SYNY3 (Q57014) Putative RNA-binding protein rbpA	49	5e-06
59	ELAV2_RAT (Q8CH84) ELAV-like protein 2 (Hu-antigen B) (HuB)	48	6e-06
60	ELAV2_PONPY (Q5R9Z6) ELAV-like protein 2	48	6e-06
61	ELAV2_HUMAN (Q12926) ELAV-like protein 2 (Hu-antigen B) (HuB) (E...	48	6e-06
62	ELAV2_MOUSE (Q60899) ELAV-like protein 2 (Hu-antigen B) (HuB) (E...	48	6e-06
63	ELAV4_HUMAN (P26378) ELAV-like protein 4 (Paraneoplastic encepha...	48	6e-06
64	ELAV4_RAT (O09032) ELAV-like protein 4 (Paraneoplastic encephalo...	48	6e-06
65	RNPC1_MOUSE (Q62176) RNA-binding region-containing protein 1 (ss...	48	6e-06
66	ELAV4_MOUSE (Q61701) ELAV-like protein 4 (Paraneoplastic encepha...	48	6e-06
67	HNRPD_MOUSE (Q60668) Heterogeneous nuclear ribonucleoprotein D0 ...	48	8e-06
68	HNRPD_HUMAN (Q14103) Heterogeneous nuclear ribonucleoprotein D0 ...	48	8e-06
69	EPABA_XENLA (Q98SP8) Embryonic polyadenylate-binding protein-A (...	48	8e-06
70	YP85_CAEEL (Q09442) Putative RNA-binding protein C08B11.5	48	8e-06
71	ELAV3_MOUSE (Q60900) ELAV-like protein 3 (Hu-antigen C) (HuC)	47	1e-05
72	ELAV3_HUMAN (Q14576) ELAV-like protein 3 (Hu-antigen C) (HuC) (P...	47	1e-05
73	RB27C_DROME (P48809) Heterogeneous nuclear ribonucleoprotein 27C...	47	1e-05
74	NUCL_MOUSE (P09405) Nucleolin (Protein C23)	47	1e-05
75	NUCL_RAT (P13383) Nucleolin (Protein C23)	47	1e-05
76	GAR2_SCHPO (P41891) Protein gar2	47	1e-05
77	NUCL_MESAU (P08199) Nucleolin (Protein C23)	47	1e-05
78	NUCL_HUMAN (P19338) Nucleolin (Protein C23)	47	1e-05
79	NUCL_CHICK (P15771) Nucleolin (Protein C23)	47	1e-05
80	NUCL_PONPY (Q5RF26) Nucleolin	47	1e-05
81	NUCL_MACFA (Q4R4J7) Nucleolin	47	1e-05
82	EPABB_XENLA (Q6GR16) Embryonic polyadenylate-binding protein-B (...	47	2e-05
83	HRP1_YEAST (Q99383) Nuclear polyadenylated RNA-binding protein 4...	47	2e-05
84	PABP4_HUMAN (Q13310) Polyadenylate-binding protein 4 (Poly(A)-bi...	46	2e-05
85	SXL_MUSDO (O17310) Sex-lethal homolog	46	2e-05
86	PABPX_ARATH (Q9ZQA8) Probable polyadenylate-binding protein At2g...	46	3e-05
87	NUCL_XENLA (P20397) Nucleolin (Protein C23)	45	4e-05
88	RO22_XENLA (P51990) Heterogeneous nuclear ribonucleoprotein A2 h...	45	4e-05
89	ROA2_HUMAN (P22626) Heterogeneous nuclear ribonucleoproteins A2/...	45	4e-05
90	ROA2_MOUSE (O88569) Heterogeneous nuclear ribonucleoproteins A2/...	45	4e-05
91	NSR1_YEAST (P27476) Nuclear localization sequence-binding protei...	45	4e-05
92	TIA1_MOUSE (P52912) Nucleolysin TIA-1 (RNA-binding protein TIA-1)	45	5e-05
93	TIA1_HUMAN (P31483) Nucleolysin TIA-1 isoform p40 (RNA-binding p...	45	5e-05
94	ROAA_MOUSE (Q99020) Heterogeneous nuclear ribonucleoprotein A/B ...	45	5e-05
95	RRP2_SPIOL (P82277) Plastid-specific 30S ribosomal protein 2, ch...	45	5e-05
96	YDB2_SCHPO (Q10355) Hypothetical RNA-binding protein C22E12.02 i...	45	5e-05
97	SXL_CHRRU (O97018) Sex-lethal homolog	45	5e-05
98	TIAR_HUMAN (Q01085) Nucleolysin TIAR (TIA-1-related protein)	45	7e-05
99	TIAR_MOUSE (P70318) Nucleolysin TIAR (TIA-1-related protein)	45	7e-05
100	CSTFT_MOUSE (Q8C7E9) Cleavage stimulation factor, 64 kDa subunit...	45	7e-05
101	CSTFT_HUMAN (Q9H0L4) Cleavage stimulation factor, 64 kDa subunit...	45	7e-05
102	PABP3_ARATH (O64380) Polyadenylate-binding protein 3 (Poly(A)-bi...	45	7e-05
103	SXL_MEGSC (O01671) Sex-lethal homolog	44	9e-05
104	MSI2H_MOUSE (Q920Q6) RNA-binding protein Musashi homolog 2 (Musa...	44	9e-05
105	MSI2H_HUMAN (Q96DH6) RNA-binding protein Musashi homolog 2 (Musa...	44	9e-05
106	CSTF2_MOUSE (Q8BIQ5) Cleavage stimulation factor, 64 kDa subunit...	44	9e-05
107	ROA1_DROME (P07909) Heterogeneous nuclear ribonucleoprotein A1 (...	44	9e-05
108	CSTF2_BOVIN (Q8HXM1) Cleavage stimulation factor, 64 kDa subunit...	44	9e-05
109	CSTF2_PONPY (Q5RDA3) Cleavage stimulation factor, 64 kDa subunit...	44	9e-05
110	CSTF2_HUMAN (P33240) Cleavage stimulation factor, 64 kDa subunit...	44	9e-05
111	ROAA_HUMAN (Q99729) Heterogeneous nuclear ribonucleoprotein A/B ...	44	1e-04
112	DAZP1_MOUSE (Q9JII5) DAZ-associated protein 1 (Deleted in azoosp...	44	1e-04
113	ROA1_CAEEL (Q22037) Heterogeneous nuclear ribonucleoprotein A1	44	1e-04
114	DAZP1_XENLA (Q98SJ2) DAZ-associated protein 1 (Deleted in azoosp...	44	1e-04
115	YDC1_SCHPO (Q10422) Hypothetical RNA-binding protein C25G10.01 i...	44	1e-04
116	SXL_DROSU (Q24668) Protein sex-lethal	44	1e-04
117	SXL_DROME (P19339) Protein sex-lethal	44	1e-04
118	SAP49_SCHPO (O14102) Spliceosome-associated protein 49	44	1e-04
119	DAZP1_HUMAN (Q96EP5) DAZ-associated protein 1 (Deleted in azoosp...	44	1e-04
120	SQD_DROME (Q08473) RNA-binding protein squid (Heterogeneous nucl...	44	1e-04
121	SFRS2_RAT (Q6PDU1) Splicing factor, arginine/serine-rich 2 (Spli...	44	1e-04
122	SFRS2_PANTR (Q5R1W5) Splicing factor, arginine/serine-rich 2 (Sp...	44	1e-04
123	SFRS2_MOUSE (Q62093) Splicing factor, arginine/serine-rich 2 (Sp...	44	1e-04
124	SFRS2_HUMAN (Q01130) Splicing factor, arginine/serine-rich 2 (Sp...	44	1e-04
125	SFRS2_CHICK (P30352) Splicing factor, arginine/serine-rich 2 (Sp...	44	1e-04
126	PPIE_DROME (Q9V3G3) Peptidyl-prolyl cis-trans isomerase E (EC 5....	43	2e-04
127	DAZL_MACFA (Q95192) Deleted in azoospermia-like (DAZ-like autoso...	43	2e-04
128	DAZL_HUMAN (Q92904) Deleted in azoospermia-like (DAZ-like autoso...	43	2e-04
129	DAZL_MOUSE (Q64368) Deleted in azoospermia-like (DAZ-like autoso...	43	2e-04
130	ELAV1_HUMAN (Q15717) ELAV-like protein 1 (Hu-antigen R) (HuR)	43	2e-04
131	HNRPQ_RAT (Q7TP47) Heterogeneous nuclear ribonucleoprotein Q (hn...	43	3e-04
132	HNRPQ_MOUSE (Q7TMK9) Heterogeneous nuclear ribonucleoprotein Q (...	43	3e-04
133	HNRPQ_HUMAN (O60506) Heterogeneous nuclear ribonucleoprotein Q (...	43	3e-04
134	DAZL_CALJA (Q9BGN8) Deleted in azoospermia-like (DAZ-like autoso...	43	3e-04
135	SXL_CERCA (O61374) Sex-lethal homolog (CCSXL)	43	3e-04
136	PABP_SCHPO (P31209) Polyadenylate-binding protein (Poly(A)-bindi...	43	3e-04
137	ROA1_HUMAN (P09651) Heterogeneous nuclear ribonucleoprotein A1 (...	42	3e-04
138	ROA1_BOVIN (P09867) Heterogeneous nuclear ribonucleoprotein A1 (...	42	3e-04
139	ROA1_RAT (P04256) Heterogeneous nuclear ribonucleoprotein A1 (He...	42	3e-04
140	ROA1_MOUSE (P49312) Heterogeneous nuclear ribonucleoprotein A1 (...	42	3e-04
141	ROA1_MACMU (Q28521) Heterogeneous nuclear ribonucleoprotein A1 (...	42	3e-04
142	DRBP1_HUMAN (Q8IUH3) Developmentally-regulated RNA-binding prote...	42	3e-04
143	DRBP1_RAT (Q8CFD1) Developmentally-regulated RNA-binding protein 1	42	4e-04
144	DRBP1_MOUSE (Q8BHN5) Developmentally-regulated RNA-binding prote...	42	4e-04
145	RO21_XENLA (P51989) Heterogeneous nuclear ribonucleoprotein A2 h...	42	4e-04
146	RB97D_DROME (Q02926) Ribonucleoprotein RB97D	42	4e-04
147	ELAV1_MOUSE (P70372) ELAV-like protein 1 (Hu-antigen R) (HuR) (E...	42	6e-04
148	MSI1H_RAT (Q8K3P4) RNA-binding protein Musashi homolog 1 (Musash...	42	6e-04
149	MSI1H_MOUSE (Q61474) RNA-binding protein Musashi homolog 1 (Musa...	42	6e-04
150	CUGB1_MOUSE (P28659) CUG triplet repeat RNA-binding protein 1 (C...	42	6e-04
151	CUGB1_HUMAN (Q92879) CUG triplet repeat RNA-binding protein 1 (C...	42	6e-04
152	SAFB1_HUMAN (Q15424) Scaffold attachment factor B (Scaffold atta...	41	7e-04
153	PABP5_PONPY (P60050) Polyadenylate-binding protein 5 (Poly(A)-bi...	41	7e-04
154	PABP5_PANTR (P60049) Polyadenylate-binding protein 5 (Poly(A)-bi...	41	7e-04
155	PABP5_MACMU (Q7JGR2) Polyadenylate-binding protein 5 (Poly(A)-bi...	41	7e-04
156	PABP5_HYLLA (P60048) Polyadenylate-binding protein 5 (Poly(A)-bi...	41	7e-04
157	PABP5_HUMAN (Q96DU9) Polyadenylate-binding protein 5 (Poly(A)-bi...	41	7e-04
158	PABP5_GORGO (P60047) Polyadenylate-binding protein 5 (Poly(A)-bi...	41	7e-04
159	MSI1H_HUMAN (O43347) RNA-binding protein Musashi homolog 1 (Musa...	41	7e-04
160	RBMX2_MOUSE (Q8R0F5) RNA-binding motif protein, X-linked 2	41	0.001
161	YG41_SCHPO (O60176) Hypothetical RNA-binding protein C23E6.01c i...	41	0.001
162	RBMX2_HUMAN (Q9Y388) RNA-binding motif protein, X-linked 2	41	0.001
163	ROA3_HUMAN (P51991) Heterogeneous nuclear ribonucleoprotein A3 (...	41	0.001
164	PPIE_MOUSE (Q9QZH3) Peptidyl-prolyl cis-trans isomerase E (EC 5....	41	0.001
165	PPIE_HUMAN (Q9UNP9) Peptidyl-prolyl cis-trans isomerase E (EC 5....	41	0.001
166	ROA3_RAT (Q6URK4) Heterogeneous nuclear ribonucleoprotein A3 (hn...	41	0.001
167	ROA3_MOUSE (Q8BG05) Heterogeneous nuclear ribonucleoprotein A3 (...	41	0.001
168	SAFB2_HUMAN (Q14151) Scaffold attachment factor B2	41	0.001
169	ROA1_SCHAM (P21522) Heterogeneous nuclear ribonucleoprotein A1, ...	40	0.001
170	MK67I_BRARE (Q8JIY8) MKI67 FHA domain-interacting nucleolar phos...	40	0.001
171	RBY1A_HUMAN (Q15414) RNA-binding motif protein, Y chromosome, fa...	40	0.001
172	SAFB1_RAT (O88453) Scaffold attachment factor B (Scaffold attach...	40	0.002
173	DAZL_CHICK (Q804A9) Deleted in azoospermia-like (DAZ-like protein)	40	0.002
174	ROA0_HUMAN (Q13151) Heterogeneous nuclear ribonucleoprotein A0 (...	40	0.002
175	RNA15_YEAST (P25299) mRNA 3'-end-processing protein RNA15	40	0.002
176	IF34_YEAST (Q04067) Eukaryotic translation initiation factor 3 R...	40	0.002
177	BOLL_MACFA (Q8WP23) Protein boule-like	40	0.002
178	BOLL_HUMAN (Q8N9W6) Protein boule-like	40	0.002
179	BOLL_MOUSE (Q924M5) Protein boule-like	40	0.002
180	RO31_XENLA (P51968) Heterogeneous nuclear ribonucleoprotein A3 h...	40	0.002
181	RO32_XENLA (P51992) Heterogeneous nuclear ribonucleoprotein A3 h...	40	0.002
182	RB87F_DROME (P48810) Heterogeneous nuclear ribonucleoprotein 87F...	40	0.002
183	YG5B_YEAST (P53316) Hypothetical 89.5 kDa protein in MGA1-GCN4 i...	39	0.003
184	DAZ2_HUMAN (Q13117) Deleted in azoospermia protein 2	39	0.004
185	RBMS2_HUMAN (Q15434) RNA-binding motif, single-stranded-interact...	39	0.004
186	RBM8A_MOUSE (Q9CWZ3) RNA-binding protein 8A (RNA-binding motif p...	39	0.004
187	RBM8A_HUMAN (Q9Y5S9) RNA-binding protein 8A (RNA-binding motif p...	39	0.004
188	RSP4_CAEEL (Q09511) Probable splicing factor, arginine/serine-ri...	39	0.004
189	RBMS1_MOUSE (Q91W59) RNA-binding motif, single-stranded-interact...	39	0.004
190	ROA1_XENLA (P17130) Heterogeneous nuclear ribonucleoproteins A1 ...	39	0.004
191	DAZ4_HUMAN (Q86SG3) Deleted in azoospermia protein 4	39	0.004
192	PPIL4_SCHPO (Q9UUE4) Peptidyl-prolyl cis-trans isomerase cyp6 (E...	39	0.004
193	DAZ1_HUMAN (Q9NQZ3) Deleted in azoospermia protein 1	39	0.004
194	DAZ3_HUMAN (Q9NR90) Deleted in azoospermia protein 3	39	0.004
195	RBMS1_HUMAN (P29558) RNA-binding motif, single-stranded-interact...	39	0.004
196	HNRPR_HUMAN (O43390) Heterogeneous nuclear ribonucleoprotein R (...	39	0.005
197	HNRPM_MOUSE (Q9D0E1) Heterogeneous nuclear ribonucleoprotein M (...	38	0.006
198	BOULE_DROME (Q24207) Protein boule	38	0.006
199	PABPX_SCHPO (Q9P6M8) mRNA export factor crp79 (Polyadenylate-bin...	38	0.006
200	NAM8_YEAST (Q00539) Protein NAM8	38	0.008
201	RBMS2_MOUSE (Q8VC70) RNA-binding motif, single-stranded-interact...	38	0.008
202	CTF1_SCHPO (O43040) Cleavage and termination factor 1 (Transcrip...	38	0.008
203	MRD1_CANAL (Q5AJS6) Multiple RNA-binding domain-containing prote...	38	0.008
204	IF34_CAEEL (Q19706) Probable eukaryotic translation initiation f...	37	0.011
205	SAFB2_MOUSE (Q80YR5) Scaffold attachment factor B2	37	0.011
206	HNRPM_RAT (Q62826) Heterogeneous nuclear ribonucleoprotein M (hn...	37	0.011
207	HNRPM_HUMAN (P52272) Heterogeneous nuclear ribonucleoprotein M (...	37	0.011
208	SFPQ_MOUSE (Q8VIJ6) Splicing factor, proline- and glutamine-rich...	37	0.014
209	YNL0_YEAST (P53927) Hypothetical 25.4 kDa protein in CYB5-LEU4 i...	37	0.014
210	SFPQ_HUMAN (P23246) Splicing factor, proline- and glutamine-rich...	37	0.014
211	IF39_YEAST (P06103) Eukaryotic translation initiation factor 3 9...	37	0.014
212	TCG1_SCHPO (Q9HEQ9) Single-stranded TG1-3 DNA-binding protein	37	0.014
213	RSD1_SCHPO (O13845) RNA-binding protein rsd1	37	0.014
214	TRA2_DROME (P19018) Transformer-2 sex-determining protein	37	0.018
215	RBM8A_DROME (Q9V535) RNA-binding protein 8A (Protein tsunagi)	37	0.018
216	ELAV_DROVI (P23241) Protein elav (Embryonic lethal abnormal visu...	37	0.018
217	ELAV_DROME (P16914) Protein elav (Embryonic lethal abnormal visu...	37	0.018
218	MRD1_CANGA (Q6FXP4) Multiple RNA-binding domain-containing prote...	36	0.024
219	IF34_MOUSE (Q9Z1D1) Eukaryotic translation initiation factor 3 s...	36	0.024
220	IF34_HUMAN (O75821) Eukaryotic translation initiation factor 3 s...	36	0.024
221	TADBP_MOUSE (Q921F2) TAR DNA-binding protein 43 (TDP-43)	36	0.024
222	MK67I_XENTR (Q6GL69) MKI67 FHA domain-interacting nucleolar phos...	36	0.024
223	CSX1_SCHPO (O13759) RNA-binding post-transcriptional regulator csx1	36	0.031
224	TADBP_HUMAN (Q13148) TAR DNA-binding protein 43 (TDP-43)	36	0.031
225	PUF68_DROME (Q8T6B9) Poly U-binding splicing factor half pint (6...	36	0.031
226	GBP2_YEAST (P25555) Single-strand telomeric DNA-binding protein ...	35	0.040
227	NGR1_YEAST (P32831) Negative growth regulatory protein NGR1 (RNA...	35	0.040
228	TRA2_DROVI (O02008) Transformer-2 sex-determining protein	35	0.040
229	PPIL4_NEUCR (Q871A4) Peptidyl-prolyl cis-trans isomerase-like 4 ...	35	0.040
230	NOP12_YARLI (Q6C2Q7) Nucleolar protein 12	35	0.040
231	MK67I_XENLA (Q7SYS2) MKI67 FHA domain-interacting nucleolar phos...	35	0.040
232	RU17_ARATH (Q42404) U1 small nuclear ribonucleoprotein 70 kDa (U...	35	0.053
233	RU17_DROME (P17133) U1 small nuclear ribonucleoprotein 70 kDa (U...	35	0.069
234	IF34_SCHPO (P78795) Probable eukaryotic translation initiation f...	35	0.069
235	RBM34_MOUSE (Q8C5L7) RNA-binding protein 34 (RNA-binding motif p...	34	0.090
236	RBM28_MOUSE (Q8CGC6) RNA-binding protein 28 (RNA-binding motif p...	34	0.090
237	FCA_ARATH (O04425) Flowering time control protein FCA	34	0.090
238	RBM34_RAT (Q5M9F1) RNA-binding protein 34 (RNA-binding motif pro...	34	0.090
239	IST3_YEAST (P40565) U2 snRNP component IST3 (U2 snRNP protein SN...	34	0.090
240	RBM28_HUMAN (Q9NW13) RNA-binding protein 28 (RNA-binding motif p...	34	0.090
241	FUSIP_MOUSE (Q9R0U0) FUS-interacting serine-arginine-rich protei...	34	0.090
242	FUSIP_HUMAN (O75494) FUS-interacting serine-arginine-rich protei...	34	0.090
243	RBM34_HUMAN (P42696) RNA-binding protein 34 (RNA-binding motif p...	34	0.090
244	A2BP1_MOUSE (Q9JJ43) Ataxin-2-binding protein 1	34	0.12
245	RBM9_HUMAN (O43251) RNA-binding protein 9 (RNA-binding motif pro...	34	0.12
246	RBM19_HUMAN (Q9Y4C8) Probable RNA-binding protein 19 (RNA-bindin...	34	0.12
247	MK67I_MOUSE (Q91VE6) MKI67 FHA domain-interacting nucleolar phos...	34	0.12
248	A2BP1_HUMAN (Q9NWB1) Ataxin-2-binding protein 1	34	0.12
249	MRD1_ASPFU (Q4WJT7) Multiple RNA-binding domain-containing prote...	34	0.12
250	HNRPC_RAT (P17132) Heterogeneous nuclear ribonucleoprotein C (hn...	33	0.15
251	SCE3_SCHPO (O14369) Probable RNA-binding protein sce3	33	0.15
252	RU17_YEAST (Q00916) U1 small nuclear ribonucleoprotein 70 kDa ho...	33	0.20
253	DAZL_BRARE (Q9YGW7) Deleted in azoospermia-like (DAZ-like protei...	33	0.20
254	RNP24_SCHPO (Q09100) RNA-binding protein rnp24	33	0.20
255	MRD1_ASHGO (Q75A83) Multiple RNA-binding domain-containing prote...	33	0.20
256	CPSF6_BRARE (Q6NWC6) Cleavage and polyadenylation specificity fa...	33	0.26
257	MYEF2_HUMAN (Q9P2K5) Myelin expression factor 2 (MyEF-2) (MST156)	33	0.26
258	MYEF2_MOUSE (Q8C854) Myelin expression factor 2 (MyEF-2) (MEF-2)	33	0.26
259	MRD1_YARLI (Q6CEW9) Multiple RNA-binding domain-containing prote...	33	0.26
260	PPIL4_USTMA (P0C196) Peptidyl-prolyl cis-trans isomerase-like 4 ...	33	0.26
261	PPIL4_MOUSE (Q9CXG3) Peptidyl-prolyl cis-trans isomerase-like 4 ...	33	0.26
262	PPIL4_HUMAN (Q8WUA2) Peptidyl-prolyl cis-trans isomerase-like 4 ...	33	0.26
263	MRD1_NEUCR (Q7SG09) Multiple RNA-binding domain-containing prote...	33	0.26
264	MRD1_KLULA (Q6CQR6) Multiple RNA-binding domain-containing prote...	33	0.26
265	SRR35_HUMAN (Q8WXF0) 35 kDa SR repressor protein (SRrp35)	33	0.26
266	MRD1_YEAST (Q06106) Multiple RNA-binding domain-containing prote...	33	0.26
267	RU17_XENTR (Q66II8) U1 small nuclear ribonucleoprotein 70 kDa (U...	32	0.34
268	RU17_MOUSE (Q62376) U1 small nuclear ribonucleoprotein 70 kDa (U...	32	0.45
269	RU17_HUMAN (P08621) U1 small nuclear ribonucleoprotein 70 kDa (U...	32	0.45
270	YRA1_YEAST (Q12159) RNA annealing protein YRA1	32	0.45
271	NOP4_YEAST (P37838) Nucleolar protein NOP4 (Nucleolar protein NO...	32	0.45
272	ACF_MOUSE (Q5YD48) APOBEC1 complementation factor (APOBEC1-stimu...	32	0.45
273	RBM19_MOUSE (Q8R3C6) Probable RNA-binding protein 19 (RNA-bindin...	32	0.58
274	RBM11_HUMAN (P57052) Putative RNA-binding protein 11 (RNA-bindin...	32	0.58
275	ACF_RAT (Q923K9) APOBEC1 complementation factor (APOBEC1-stimula...	32	0.58
276	YNR5_YEAST (P53883) Hypothetical 45.7 kDa protein in RPS3-PSD1 i...	32	0.58
277	CPSF7_MOUSE (Q8BTV2) Cleavage and polyadenylation specificity fa...	32	0.58
278	CPSF7_HUMAN (Q8N684) Cleavage and polyadenylation specificity fa...	32	0.58
279	CPSF7_RAT (Q5XI29) Cleavage and polyadenylation specificity fact...	32	0.58
280	PRT1_PICAN (P12806) Putative PRT1 protein	32	0.58
281	MSA1_SCHPO (Q10277) Multicopy suppressor of sporulation protein ...	31	0.76
282	FOX1_CAEEL (Q10572) Sex determination protein fox-1 (Feminizing ...	31	0.76
283	LARK_DROME (Q94901) RNA-binding protein lark	31	0.99
284	U2AF2_MOUSE (P26369) Splicing factor U2AF 65 kDa subunit (U2 aux...	30	1.3
285	U2AF2_HUMAN (P26368) Splicing factor U2AF 65 kDa subunit (U2 aux...	30	1.3
286	MRD1_USTMA (Q4PC17) Multiple RNA-binding domain-containing prote...	30	1.3
287	CWC2_YARLI (Q6C007) Pre-mRNA-splicing factor CWC2	30	1.3
288	SART3_MOUSE (Q9JLI8) Squamous cell carcinoma antigen recognized ...	30	1.7
289	ACF_HUMAN (Q9NQ94) APOBEC1 complementation factor (APOBEC1-stimu...	30	1.7
290	U2AF2_SCHPO (P36629) Splicing factor U2AF 59 kDa subunit (U2 aux...	30	1.7
291	HNRU2_HUMAN (P07029) Heterogeneous nuclear ribonucleoprotein UP2...	30	1.7
292	NOP12_YEAST (Q08208) Nucleolar protein 12	30	2.2
293	CWC2_EMENI (Q5BB35) Pre-mRNA-splicing factor cwc2	30	2.2
294	NELFE_MOUSE (P19426) Negative elongation factor E (NELF-E) (RD p...	30	2.2
295	SART3_PONPY (Q5REG1) Squamous cell carcinoma antigen recognized ...	30	2.2
296	NOP12_KLULA (Q6CKV6) Nucleolar protein 12	30	2.2
297	SART3_HUMAN (Q15020) Squamous cell carcinoma antigen recognized ...	30	2.2
298	NELFE_HUMAN (P18615) Negative elongation factor E (NELF-E) (RD p...	30	2.2
299	DAZ1_CAEEL (Q20870) DAZ protein 1	30	2.2
300	ACF_PONPY (Q5R9H4) APOBEC1 complementation factor (APOBEC1-stimu...	30	2.2
301	NELFE_DROVI (Q95ZE9) Negative elongation factor E	29	2.9
302	CAZ_DROME (Q27294) RNA-binding protein cabeza (Sarcoma-associate...	29	3.8
303	RSP3_CAEEL (Q9NEW6) Probable splicing factor, arginine/serine-ri...	28	4.9
304	CWC2_ASPFU (Q4WU07) Pre-mRNA-splicing factor cwc2	28	4.9
305	ARP2_PLAFA (P13824) Clustered-asparagine-rich protein (CARP)	28	4.9
306	CWC2_SCHPO (P87126) Pre-mRNA-splicing factor cwc2 (Complexed wit...	28	4.9
307	FUS_HUMAN (P35637) RNA-binding protein FUS (Oncogene FUS) (Oncog...	28	6.4
308	FUS_BOVIN (Q28009) RNA-binding protein FUS (Pigpen protein)	28	6.4
309	NACAM_MOUSE (P70670) Nascent polypeptide-associated complex alph...	28	6.4
310	RBM7_HUMAN (Q9Y580) RNA-binding protein 7 (RNA-binding motif pro...	28	6.4
311	FUS_MOUSE (P56959) RNA-binding protein FUS (Pigpen protein)	28	6.4
312	RBM7_BOVIN (Q3MHY8) RNA-binding protein 7 (RNA-binding motif pro...	28	6.4
313	RBM5_HUMAN (P52756) RNA-binding protein 5 (RNA-binding motif pro...	28	6.4
314	U2AF2_DROME (Q24562) Splicing factor U2AF 50 kDa subunit (U2 aux...	28	8.4
315	RNPS1_XENLA (Q5XG24) RNA-binding protein with serine-rich domain 1	28	8.4
316	RBM7_MOUSE (Q9CQT2) RNA-binding protein 7 (RNA-binding motif pro...	28	8.4
317	CWC2_LEPMC (Q6T412) Pre-mRNA-splicing factor CWC2	28	8.4

---

>GRP7_ARATH (Q03250) Glycine-rich RNA-binding protein 7|
          Length = 176

 Score = 86.7 bits (213), Expect(2) = 7e-18
 Identities = 40/53 (75%), Positives = 47/53 (88%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           +L+ AF++YGDVIDSKII DRETGRSRGFGFVTF  ++AM+ AIE MNGQDLD
Sbjct: 23  ALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLD 75



 Score = 21.6 bits (44), Expect(2) = 7e-18
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = +1

Query: 172 ITVNEAQSRRS 204
           ITVNEAQSR S
Sbjct: 79  ITVNEAQSRGS 89

---

>GRP1_SINAL (P49310) Glycine-rich RNA-binding protein GRP1A|
          Length = 166

 Score = 84.3 bits (207), Expect(2) = 3e-17
 Identities = 38/53 (71%), Positives = 47/53 (88%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           +L+ AFS+YG+V+DSKII DRETGRSRGFGFVTF  +++M+ AIE MNGQDLD
Sbjct: 23  ALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLD 75



 Score = 21.6 bits (44), Expect(2) = 3e-17
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = +1

Query: 172 ITVNEAQSRRS 204
           ITVNEAQSR S
Sbjct: 79  ITVNEAQSRGS 89

---

>GRP1_DAUCA (Q03878) Glycine-rich RNA-binding protein|
          Length = 157

 Score = 83.6 bits (205), Expect(2) = 6e-17
 Identities = 38/53 (71%), Positives = 46/53 (86%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           SL+ AFS++GD+ DSKII DRETGRSRGFGFVTF  +++MR AIE MNGQ+LD
Sbjct: 21  SLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEGMNGQELD 73



 Score = 21.6 bits (44), Expect(2) = 6e-17
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = +1

Query: 172 ITVNEAQSRRS 204
           ITVNEAQSR S
Sbjct: 77  ITVNEAQSRGS 87

---

>GRP2_SINAL (P49311) Glycine-rich RNA-binding protein GRP2A|
          Length = 169

 Score = 83.2 bits (204), Expect(2) = 8e-17
 Identities = 37/53 (69%), Positives = 47/53 (88%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           SL+ AFS++G+++DSKII DRETGRSRGFGFVTF  +++M+ AIE MNGQDLD
Sbjct: 23  SLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLD 75



 Score = 21.6 bits (44), Expect(2) = 8e-17
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = +1

Query: 172 ITVNEAQSRRS 204
           ITVNEAQSR S
Sbjct: 79  ITVNEAQSRGS 89

---

>GRPA_MAIZE (P10979) Glycine-rich RNA-binding, abscisic acid-inducible protein|
          Length = 157

 Score = 84.0 bits (206), Expect = 1e-16
 Identities = 37/53 (69%), Positives = 48/53 (90%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           SL+NAF+ YG+++DSK+ITDRETGRSRGFGFVTF+S+ +M  AIE MNG++LD
Sbjct: 23  SLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMNGKELD 75

---

>GRP8_ARATH (Q03251) Glycine-rich RNA-binding protein 8 (CCR1 protein)|
          Length = 169

 Score = 81.6 bits (200), Expect(2) = 2e-16
 Identities = 38/52 (73%), Positives = 45/52 (86%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           LQ  FS++GDVIDSKII DRE+GRSRGFGFVTF  ++AMR AIE MNG++LD
Sbjct: 22  LQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMNGKELD 73



 Score = 21.6 bits (44), Expect(2) = 2e-16
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = +1

Query: 172 ITVNEAQSRRS 204
           ITVNEAQSR S
Sbjct: 77  ITVNEAQSRGS 87

---

>GRP1_SORBI (Q99069) Glycine-rich RNA-binding protein 1 (Fragment)|
          Length = 142

 Score = 81.3 bits (199), Expect(2) = 5e-16
 Identities = 38/53 (71%), Positives = 47/53 (88%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           SL +AFS YG+V++SKII DRET RSRGFGFVTF+++EAMR AIE MNG++LD
Sbjct: 2   SLHSAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRSAIEGMNGKELD 54



 Score = 20.8 bits (42), Expect(2) = 5e-16
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = +1

Query: 172 ITVNEAQSR 198
           ITVNEAQSR
Sbjct: 58  ITVNEAQSR 66

---

>GRP2_SORBI (Q99070) Glycine-rich RNA-binding protein 2|
          Length = 168

 Score = 80.1 bits (196), Expect = 1e-15
 Identities = 36/53 (67%), Positives = 47/53 (88%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           +L+ AF+ +G VIDSK+ITDRETGRSRGFGFVTF+S+++M  AIE MNG++LD
Sbjct: 23  TLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIENMNGKELD 75

---

>GRP10_BRANA (Q05966) Glycine-rich RNA-binding protein 10|
          Length = 169

 Score = 77.0 bits (188), Expect(2) = 9e-15
 Identities = 34/52 (65%), Positives = 45/52 (86%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           L+  FS++G+VIDSKII DRETGRSRGFGFVTF  +++M+ AI+ MNG++LD
Sbjct: 22  LERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAIDEMNGKELD 73



 Score = 20.8 bits (42), Expect(2) = 9e-15
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = +1

Query: 172 ITVNEAQSR 198
           ITVNEAQSR
Sbjct: 77  ITVNEAQSR 85

---

>GRP2_ARATH (Q9SVM8) Glycine-rich RNA-binding protein 2, mitochondrial|
           precursor (AtGRP2)
          Length = 158

 Score = 67.0 bits (162), Expect = 1e-11
 Identities = 30/53 (56%), Positives = 42/53 (79%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           SL++AF+ +GDV+D+K+I DRETGRSRGFGFV F  + A   AI  M+G++L+
Sbjct: 50  SLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELN 102

---

>ROC2_NICSY (Q08937) 29 kDa ribonucleoprotein B, chloroplast precursor (CP29B)|
          Length = 291

 Score = 66.2 bits (160), Expect = 2e-11
 Identities = 27/53 (50%), Positives = 44/53 (83%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           +L+  FS+ G+V+D+K++ DR++GRSRGFGFVT++S + +  AI+++NG DLD
Sbjct: 222 ALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEVNDAIDSLNGVDLD 274



 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 22/53 (41%), Positives = 34/53 (64%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           +L   F + G+V   ++I D+ TGRSRGFGFVT ++ E +  A +  NG ++D
Sbjct: 102 ALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKEEVEAAEQQFNGYEID 154

---

>ROC2_NICPL (P49314) 31 kDa ribonucleoprotein, chloroplast precursor (CP-RBP31)|
          Length = 292

 Score = 65.1 bits (157), Expect = 5e-11
 Identities = 27/53 (50%), Positives = 44/53 (83%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           +L+  FS+ G+V+D+K++ DR++GRSRGFGFVT++S + +  AI+++NG DLD
Sbjct: 223 ALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNDAIDSLNGIDLD 275



 Score = 45.1 bits (105), Expect = 5e-05
 Identities = 21/53 (39%), Positives = 34/53 (64%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           +L   F + G+V   ++I D+ +GRSRGFGFVT ++ E +  A +  NG ++D
Sbjct: 103 ALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKEEVEAAEQQFNGYEID 155

---

>ROC1_SPIOL (P28644) 28 kDa ribonucleoprotein, chloroplast (28RNP)|
          Length = 233

 Score = 64.3 bits (155), Expect = 8e-11
 Identities = 27/52 (51%), Positives = 41/52 (78%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           L+  FS++G V+ +++++DRETGRSRGFGFVT +S+  +  AI A++GQ LD
Sbjct: 165 LEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAALDGQTLD 216



 Score = 49.3 bits (116), Expect = 3e-06
 Identities = 24/52 (46%), Positives = 34/52 (65%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           L   F   G V  +++I +RET RSRGFGFVT ++ E   +A+E +NG D+D
Sbjct: 71  LAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVELLNGYDMD 122

---

>ROC1_NICSY (Q08935) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A)|
          Length = 273

 Score = 63.9 bits (154), Expect = 1e-10
 Identities = 27/53 (50%), Positives = 43/53 (81%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           +L+  FS+ G V+D+K++ DR++GRSRGFGFVT++S E +  AIE+++G DL+
Sbjct: 203 ALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLN 255



 Score = 49.3 bits (116), Expect = 3e-06
 Identities = 24/53 (45%), Positives = 34/53 (64%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           +L   F + G+V   ++I D+ TGRSRGFGFVT +S E +  A +  NG +LD
Sbjct: 102 ALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELD 154

---

>ROC1_NICPL (P49313) 30 kDa ribonucleoprotein, chloroplast precursor (CP-RBP30)|
          Length = 279

 Score = 63.9 bits (154), Expect = 1e-10
 Identities = 27/53 (50%), Positives = 43/53 (81%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           +L+  FS+ G V+D+K++ DR++GRSRGFGFVT++S E +  AIE+++G DL+
Sbjct: 209 ALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLN 261



 Score = 49.3 bits (116), Expect = 3e-06
 Identities = 24/53 (45%), Positives = 34/53 (64%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           +L   F + G+V   ++I D+ TGRSRGFGFVT +S E +  A +  NG +LD
Sbjct: 102 ALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELD 154

---

>ROC4_NICSY (P19683) 31 kDa ribonucleoprotein, chloroplast precursor|
          Length = 315

 Score = 63.2 bits (152), Expect = 2e-10
 Identities = 28/52 (53%), Positives = 39/52 (75%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           L+  FS++G V+ ++++ DRETGRSRGFGFVT AS+  M  AI  ++GQ LD
Sbjct: 246 LEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAIANLDGQSLD 297



 Score = 40.8 bits (94), Expect = 0.001
 Identities = 20/52 (38%), Positives = 33/52 (63%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           L   F + G V  +++I +R+T +SRGFGFVT ++ E   +A+E  N  D++
Sbjct: 152 LARLFEQAGVVEIAEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEMYNRYDVN 203

---

>ROC2_ARATH (Q43349) 29 kDa ribonucleoprotein, chloroplast precursor|
           (RNA-binding protein cp29)
          Length = 342

 Score = 63.2 bits (152), Expect = 2e-10
 Identities = 25/53 (47%), Positives = 44/53 (83%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           +L+N F++ G V+++++I DR++GRS+GFGFVT +S + +++AI ++NG DLD
Sbjct: 272 ALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINSLNGADLD 324



 Score = 41.6 bits (96), Expect = 6e-04
 Identities = 20/52 (38%), Positives = 30/52 (57%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           L   F   G+V   ++I D+ TGRSRGFGFVT ++   +  A +  NG + +
Sbjct: 115 LAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQFNGYEFE 166

---

>ROC3_ARATH (Q04836) 31 kDa ribonucleoprotein, chloroplast precursor|
           (RNA-binding protein RNP-T) (RNA-binding protein 1/2/3)
           (AtRBP33) (RNA-binding protein cp31)
          Length = 329

 Score = 62.0 bits (149), Expect = 4e-10
 Identities = 25/52 (48%), Positives = 42/52 (80%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           L+  FS++G V++++++ DRETGRSRGFGFVT +  + + +AI A++GQ+L+
Sbjct: 260 LEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLE 311



 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 22/53 (41%), Positives = 33/53 (62%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           +L   F + G V  +++I +RET +SRGFGFVT +S +    A+E  N  DL+
Sbjct: 165 ALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLN 217

---

>RT19_ARATH (P39697) 40S ribosomal protein S19, mitochondrial precursor|
          Length = 212

 Score = 61.6 bits (148), Expect = 5e-10
 Identities = 26/53 (49%), Positives = 42/53 (79%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           SL++AFS +  V +++++T++ TGRSRG+GFV F S+++   AI AMNGQ+L+
Sbjct: 46  SLKDAFSSFNGVTEARVMTNKVTGRSRGYGFVNFISEDSANSAISAMNGQELN 98

---

>ROC3_NICSY (P19682) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP)|
          Length = 276

 Score = 61.2 bits (147), Expect = 7e-10
 Identities = 26/52 (50%), Positives = 40/52 (76%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           L+  FS++G V+ ++++ DRE+GRSRGFGFVT +S+  M +AI  ++GQ LD
Sbjct: 207 LEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIANLDGQTLD 258



 Score = 42.0 bits (97), Expect = 4e-04
 Identities = 22/52 (42%), Positives = 33/52 (63%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           L   F + G V  +++I +RET RSRGFGFVT ++ E   +A+E  +  DL+
Sbjct: 113 LAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAVELYSQYDLN 164

---

>ROC1_ARATH (Q9ZUU4) Putative ribonucleoprotein At2g37220, chloroplast|
           precursor
          Length = 289

 Score = 60.5 bits (145), Expect = 1e-09
 Identities = 24/53 (45%), Positives = 44/53 (83%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           +L++ FS+ G V+++++I DR++GRS+GFGFVT+ S + ++ AI++++G DLD
Sbjct: 219 ALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLD 271



 Score = 45.4 bits (106), Expect = 4e-05
 Identities = 23/52 (44%), Positives = 31/52 (59%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           L   F   G+V   ++I D+ TGRSRGFGFVT +S   +  A +  NG +LD
Sbjct: 107 LAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQFNGYELD 158

---

>CIRBP_PONPY (Q5RF83) Cold-inducible RNA-binding protein (Glycine-rich|
           RNA-binding protein CIRP)
          Length = 172

 Score = 60.1 bits (144), Expect = 2e-09
 Identities = 27/53 (50%), Positives = 38/53 (71%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           SL+  FSKYG + +  ++ DRET RSRGFGFVTF + +  + A+ AMNG+ +D
Sbjct: 21  SLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVD 73

---

>CIRBP_HUMAN (Q14011) Cold-inducible RNA-binding protein (Glycine-rich|
           RNA-binding protein CIRP) (A18 hnRNP)
          Length = 172

 Score = 60.1 bits (144), Expect = 2e-09
 Identities = 27/53 (50%), Positives = 38/53 (71%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           SL+  FSKYG + +  ++ DRET RSRGFGFVTF + +  + A+ AMNG+ +D
Sbjct: 21  SLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVD 73

---

>CIRBP_RAT (P60825) Cold-inducible RNA-binding protein (Glycine-rich|
           RNA-binding protein CIRP) (A18 hnRNP)
          Length = 172

 Score = 58.9 bits (141), Expect = 3e-09
 Identities = 26/53 (49%), Positives = 38/53 (71%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           +L+  FSKYG + +  ++ DRET RSRGFGFVTF + +  + A+ AMNG+ +D
Sbjct: 21  ALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVD 73

---

>CIRBP_MOUSE (P60824) Cold-inducible RNA-binding protein (Glycine-rich|
           RNA-binding protein CIRP) (A18 hnRNP)
          Length = 172

 Score = 58.9 bits (141), Expect = 3e-09
 Identities = 26/53 (49%), Positives = 38/53 (71%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           +L+  FSKYG + +  ++ DRET RSRGFGFVTF + +  + A+ AMNG+ +D
Sbjct: 21  ALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVD 73

---

>CIRBP_CRIGR (P60826) Cold-inducible RNA-binding protein (Glycine-rich|
           RNA-binding protein CIRP) (A18 hnRNP)
          Length = 172

 Score = 58.9 bits (141), Expect = 3e-09
 Identities = 26/53 (49%), Positives = 38/53 (71%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           +L+  FSKYG + +  ++ DRET RSRGFGFVTF + +  + A+ AMNG+ +D
Sbjct: 21  ALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVD 73

---

>CIRBP_XENLA (O93235) Cold-inducible RNA-binding protein (Glycine-rich|
           RNA-binding protein CIRP) (xCIRP)
          Length = 163

 Score = 58.2 bits (139), Expect = 6e-09
 Identities = 26/52 (50%), Positives = 38/52 (73%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           L+ AF+KYG + +  ++ DRET RSRGFGFVTF + +  + A+ AMNG+ +D
Sbjct: 21  LEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMAMNGKSVD 72

---

>RBM3_MOUSE (O89086) Putative RNA-binding protein 3 (RNA-binding motif protein|
           3)
          Length = 153

 Score = 57.8 bits (138), Expect = 8e-09
 Identities = 25/53 (47%), Positives = 37/53 (69%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           +L++ FS +G + +  ++ DRET RSRGFGF+TF + E    A+ AMNG+ LD
Sbjct: 21  ALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESLD 73

---

>RBM3_HUMAN (P98179) Putative RNA-binding protein 3 (RNA-binding motif protein|
           3) (RNPL)
          Length = 157

 Score = 57.0 bits (136), Expect = 1e-08
 Identities = 25/53 (47%), Positives = 37/53 (69%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           +L++ FS +G + +  ++ DRET RSRGFGF+TF + E    A+ AMNG+ LD
Sbjct: 21  ALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRAMNGESLD 73

---

>ROC5_NICSY (P19684) 33 kDa ribonucleoprotein, chloroplast precursor|
          Length = 324

 Score = 55.8 bits (133), Expect = 3e-08
 Identities = 25/52 (48%), Positives = 38/52 (73%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           L++AF+     + +K+I DR +GRSRGFGF+TF+S EAM  A++ MN  +L+
Sbjct: 233 LRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSALDTMNEVELE 284



 Score = 42.7 bits (99), Expect = 3e-04
 Identities = 21/51 (41%), Positives = 30/51 (58%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 158
           L   F++ G V + +I+ DR T RSRGF FVT  S E  ++AI   +G  +
Sbjct: 130 LSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRLFDGSQV 180

---

>PABP_YEAST (P04147) Polyadenylate-binding protein, cytoplasmic and nuclear|
           (Poly(A)-binding protein) (PABP) (ARS consensus-binding
           protein ACBP-67) (Polyadenylate tail-binding protein)
          Length = 576

 Score = 54.7 bits (130), Expect = 6e-08
 Identities = 26/53 (49%), Positives = 39/53 (73%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           +L + FS +GD++ SKI TD E G+S+GFGFV F  + A ++AI+A+NG  L+
Sbjct: 140 ALYDTFSVFGDILSSKIATD-ENGKSKGFGFVHFEEEGAAKEAIDALNGMLLN 191



 Score = 39.7 bits (91), Expect = 0.002
 Identities = 19/49 (38%), Positives = 30/49 (61%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQ 152
           L+  F+ YG +  +K++   E G+S+GFGFV F++ E   +AI   N Q
Sbjct: 337 LEEEFAPYGTITSAKVMRT-ENGKSKGFGFVCFSTPEEATKAITEKNQQ 384



 Score = 39.7 bits (91), Expect = 0.002
 Identities = 17/51 (33%), Positives = 32/51 (62%)
 Frame = +3

Query: 9   QNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           Q  F+K+G ++ + +  D + G+ +GFGFV +   E   +A+EA+N  +L+
Sbjct: 235 QELFAKFGPIVSASLEKDAD-GKLKGFGFVNYEKHEDAVKAVEALNDSELN 284

---

>HNRPG_HUMAN (P38159) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)|
           (RNA-binding motif protein, X chromosome) (Glycoprotein
           p43)
          Length = 391

 Score = 53.5 bits (127), Expect = 1e-07
 Identities = 24/53 (45%), Positives = 34/53 (64%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           +L+  F KYG +++  ++ DRET +SRGF FVTF S    + A   MNG+ LD
Sbjct: 23  ALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLD 75

---

>HNRPG_RAT (P84586) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)|
           (RNA-binding motif protein, X chromosome)
          Length = 388

 Score = 52.0 bits (123), Expect = 4e-07
 Identities = 23/53 (43%), Positives = 33/53 (62%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           +L+  F KYG +++  ++ DRET +SRGF FVTF S    +     MNG+ LD
Sbjct: 23  ALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDVARDMNGKSLD 75

---

>PABPA_XENLA (P20965) Polyadenylate-binding protein 1-A (Poly(A)-binding protein|
           1-A) (Cytoplasmic poly(A)-binding protein 1-A) (PABP-A)
           (PABP 1-A) (xPABP1-A)
          Length = 633

 Score = 51.6 bits (122), Expect = 5e-07
 Identities = 22/52 (42%), Positives = 37/52 (71%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           L+  F KYG  +  K++TD + G+S+GFGFV+F   E  ++A++ MNG+D++
Sbjct: 207 LKEMFGKYGPALSVKVMTD-DNGKSKGFGFVSFERHEDAQKAVDEMNGKDMN 257



 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 22/53 (41%), Positives = 36/53 (67%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           +L + FS +G+++  K++ D E G S+G+GFV F + EA  +AI+ MNG  L+
Sbjct: 114 ALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIDKMNGMLLN 164



 Score = 41.6 bits (96), Expect = 6e-04
 Identities = 20/49 (40%), Positives = 31/49 (63%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQ 152
           L+  F  +G +  +K++   E GRS+GFGFV F+S E   +A+  MNG+
Sbjct: 310 LRKEFLPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVTEMNGR 356

---

>PABP1_HUMAN (P11940) Polyadenylate-binding protein 1 (Poly(A)-binding protein|
           1) (PABP 1)
          Length = 636

 Score = 51.2 bits (121), Expect = 7e-07
 Identities = 22/52 (42%), Positives = 39/52 (75%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           L++ F K+G  +  K++TD E+G+S+GFGFV+F   E  ++A++ MNG++L+
Sbjct: 207 LKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELN 257



 Score = 45.1 bits (105), Expect = 5e-05
 Identities = 23/53 (43%), Positives = 36/53 (67%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           +L + FS +G+++  K++ D E G S+G+GFV F + EA  +AIE MNG  L+
Sbjct: 114 ALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEKMNGMLLN 164



 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 21/49 (42%), Positives = 32/49 (65%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQ 152
           L+  FS +G +  +K++   E GRS+GFGFV F+S E   +A+  MNG+
Sbjct: 310 LRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVTEMNGR 356

---

>PABP1_BOVIN (P61286) Polyadenylate-binding protein 1 (Poly(A)-binding protein|
           1) (PABP 1)
          Length = 636

 Score = 51.2 bits (121), Expect = 7e-07
 Identities = 22/52 (42%), Positives = 39/52 (75%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           L++ F K+G  +  K++TD E+G+S+GFGFV+F   E  ++A++ MNG++L+
Sbjct: 207 LKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELN 257



 Score = 45.1 bits (105), Expect = 5e-05
 Identities = 23/53 (43%), Positives = 36/53 (67%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           +L + FS +G+++  K++ D E G S+G+GFV F + EA  +AIE MNG  L+
Sbjct: 114 ALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEKMNGMLLN 164



 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 21/49 (42%), Positives = 32/49 (65%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQ 152
           L+  FS +G +  +K++   E GRS+GFGFV F+S E   +A+  MNG+
Sbjct: 310 LRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVTEMNGR 356

---

>PABP3_HUMAN (Q9H361) Polyadenylate-binding protein 3 (Poly(A)-binding protein|
           3) (PABP 3) (Testis-specific poly(A)-binding protein)
          Length = 631

 Score = 51.2 bits (121), Expect = 7e-07
 Identities = 22/52 (42%), Positives = 39/52 (75%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           L++ F K+G  +  K++TD E+G+S+GFGFV+F   E  ++A++ MNG++L+
Sbjct: 207 LKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELN 257



 Score = 45.8 bits (107), Expect = 3e-05
 Identities = 22/49 (44%), Positives = 33/49 (67%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQ 152
           L+ AFS +G +  +K++   E GRS+GFGFV F+S E   +A+  MNG+
Sbjct: 310 LRKAFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVTEMNGR 356



 Score = 38.5 bits (88), Expect = 0.005
 Identities = 20/53 (37%), Positives = 34/53 (64%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           +L +  S +G+++   ++ D E G S+G+GFV F + EA  +AI+ MNG  L+
Sbjct: 114 ALYDTVSAFGNILSCNVVCD-ENG-SKGYGFVHFETHEAAERAIKKMNGMLLN 164

---

>PUB1_YEAST (P32588) Nuclear and cytoplasmic polyadenylated RNA-binding protein|
           PUB1 (ARS consensus-binding protein ACBP-60)
           (Poly(U)-binding protein) (Poly uridylate-binding
           protein)
          Length = 452

 Score = 51.2 bits (121), Expect = 7e-07
 Identities = 21/53 (39%), Positives = 36/53 (67%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           +L+NAF  +   +   ++ D +TG SRG+GFV+F S +  + A+++M GQDL+
Sbjct: 176 TLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLN 228

---

>PABP1_RAT (Q9EPH8) Polyadenylate-binding protein 1 (Poly(A)-binding protein|
           1) (PABP 1)
          Length = 636

 Score = 50.8 bits (120), Expect = 9e-07
 Identities = 22/52 (42%), Positives = 38/52 (73%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           L+  F K+G  +  K++TD E+G+S+GFGFV+F   E  ++A++ MNG++L+
Sbjct: 207 LKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELN 257



 Score = 45.1 bits (105), Expect = 5e-05
 Identities = 23/53 (43%), Positives = 36/53 (67%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           +L + FS +G+++  K++ D E G S+G+GFV F + EA  +AIE MNG  L+
Sbjct: 114 ALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEKMNGMLLN 164



 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 21/49 (42%), Positives = 32/49 (65%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQ 152
           L+  FS +G +  +K++   E GRS+GFGFV F+S E   +A+  MNG+
Sbjct: 310 LRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVTEMNGR 356

---

>PABP1_MOUSE (P29341) Polyadenylate-binding protein 1 (Poly(A)-binding protein|
           1) (PABP 1)
          Length = 636

 Score = 50.8 bits (120), Expect = 9e-07
 Identities = 22/52 (42%), Positives = 38/52 (73%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           L+  F K+G  +  K++TD E+G+S+GFGFV+F   E  ++A++ MNG++L+
Sbjct: 207 LKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELN 257



 Score = 45.1 bits (105), Expect = 5e-05
 Identities = 23/53 (43%), Positives = 36/53 (67%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           +L + FS +G+++  K++ D E G S+G+GFV F + EA  +AIE MNG  L+
Sbjct: 114 ALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEKMNGMLLN 164



 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 21/49 (42%), Positives = 32/49 (65%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQ 152
           L+  FS +G +  +K++   E GRS+GFGFV F+S E   +A+  MNG+
Sbjct: 310 LRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVTEMNGR 356

---

>HNRPG_MOUSE (O35479) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)|
           (RNA-binding motif protein, X chromosome)
          Length = 388

 Score = 50.8 bits (120), Expect = 9e-07
 Identities = 23/53 (43%), Positives = 33/53 (62%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           +L+  F KYG +++  ++ DRET +SRGF FVT  S    + A   MNG+ LD
Sbjct: 23  ALEAVFGKYGRIVEIILMKDRETNKSRGFAFVTLESPADAKDAARDMNGKSLD 75

---

>TRA2B_RAT (P62997) Arginine/serine-rich splicing factor 10|
           (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein
           homolog) (RA301)
          Length = 288

 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 23/52 (44%), Positives = 34/52 (65%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           L+  FSKYG + D  I+ D+++ RSRGF FV F + +  ++A E  NG +LD
Sbjct: 134 LREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELD 185

---

>TRA2B_MOUSE (P62996) Arginine/serine-rich splicing factor 10|
           (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein
           homolog) (Silica-induced gene 41 protein) (SIG-41)
          Length = 288

 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 23/52 (44%), Positives = 34/52 (65%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           L+  FSKYG + D  I+ D+++ RSRGF FV F + +  ++A E  NG +LD
Sbjct: 134 LREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELD 185

---

>TRA2B_HUMAN (P62995) Arginine/serine-rich splicing factor 10|
           (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein
           homolog)
          Length = 288

 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 23/52 (44%), Positives = 34/52 (65%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           L+  FSKYG + D  I+ D+++ RSRGF FV F + +  ++A E  NG +LD
Sbjct: 134 LREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELD 185

---

>RNPC2_MOUSE (Q8VH51) RNA-binding region-containing protein 2 (Coactivator of|
           activating protein 1 and estrogen receptors)
           (Coactivator of AP-1 and ERs) (Transcription coactivator
           CAPER)
          Length = 530

 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 20/51 (39%), Positives = 35/51 (68%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 158
           L+  F  +G +   +++ D ETGRS+G+GF+TF+  E  ++A+E +NG +L
Sbjct: 266 LRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 316



 Score = 36.6 bits (83), Expect = 0.018
 Identities = 20/49 (40%), Positives = 29/49 (59%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQ 152
           L+  FS  G V D ++I+DR + RSRG  +V F    ++R AI  + GQ
Sbjct: 169 LEEFFSTVGKVRDVRMISDRNSRRSRGIAYVEFVDVSSVRLAI-GLTGQ 216

---

>RNPC2_HUMAN (Q14498) RNA-binding region-containing protein 2 (Hepatocellular|
           carcinoma protein 1) (Splicing factor HCC1)
          Length = 530

 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 20/51 (39%), Positives = 35/51 (68%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 158
           L+  F  +G +   +++ D ETGRS+G+GF+TF+  E  ++A+E +NG +L
Sbjct: 266 LRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 316



 Score = 32.7 bits (73), Expect = 0.26
 Identities = 18/49 (36%), Positives = 28/49 (57%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQ 152
           L+  FS  G V D ++I+DR + RS+G  +V F    ++  AI  + GQ
Sbjct: 169 LEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI-GLTGQ 216

---

>RBM23_HUMAN (Q86U06) Probable RNA-binding protein 23 (RNA-binding motif protein|
           23) (RNA-binding region-containing protein 4) (Splicing
           factor SF2)
          Length = 439

 Score = 50.1 bits (118), Expect = 2e-06
 Identities = 20/51 (39%), Positives = 35/51 (68%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 158
           L+  F  +G + +  ++ D +TGRS+G+GF+TF+  E  R+A+E +NG +L
Sbjct: 279 LRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFEL 329



 Score = 35.8 bits (81), Expect = 0.031
 Identities = 20/51 (39%), Positives = 31/51 (60%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 158
           L++ FS  G V D +II+DR + RS+G  +V F   +++  AI  + GQ L
Sbjct: 182 LEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQRL 231

---

>TRA2A_MOUSE (Q6PFR5) Transformer-2 protein homolog (TRA-2 alpha)|
          Length = 281

 Score = 49.7 bits (117), Expect = 2e-06
 Identities = 22/52 (42%), Positives = 33/52 (63%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           L+  FS+YG +    ++ D+ TGRSRGF FV F   +  ++A+E  NG +LD
Sbjct: 133 LREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELD 184

---

>PABPB_XENLA (Q6IP09) Polyadenylate-binding protein 1-B (Poly(A)-binding protein|
           1-B) (Cytoplasmic poly(A)-binding protein 1-B) (PABP-B)
           (PABP 1-B) (xPABP1-B)
          Length = 633

 Score = 49.7 bits (117), Expect = 2e-06
 Identities = 23/52 (44%), Positives = 37/52 (71%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           L+  F +YG  +  K++TD + G+SRGFGFV+F   E  ++A++ MNG+DL+
Sbjct: 207 LKEWFGQYGAALSVKVMTD-DHGKSRGFGFVSFERHEDAQKAVDDMNGKDLN 257



 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 22/53 (41%), Positives = 36/53 (67%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           +L + FS +G+++  K++ D E G S+G+GFV F + EA  +AI+ MNG  L+
Sbjct: 114 ALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIDKMNGMLLN 164



 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 20/49 (40%), Positives = 32/49 (65%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQ 152
           L+  F+ +G +  +K++   E GRS+GFGFV F+S E   +A+  MNG+
Sbjct: 310 LRKEFTPFGSITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVTEMNGR 356

---

>TRA2A_HUMAN (Q13595) Transformer-2 protein homolog (TRA-2 alpha)|
          Length = 282

 Score = 49.7 bits (117), Expect = 2e-06
 Identities = 22/52 (42%), Positives = 33/52 (63%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           L+  FS+YG +    ++ D+ TGRSRGF FV F   +  ++A+E  NG +LD
Sbjct: 135 LREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELD 186

---

>SF3B4_HUMAN (Q15427) Splicing factor 3B subunit 4 (Spliceosome-associated|
           protein 49) (SAP 49) (SF3b50) (Pre-mRNA-splicing factor
           SF3b 49 kDa subunit)
          Length = 424

 Score = 49.3 bits (116), Expect = 3e-06
 Identities = 25/52 (48%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDS-KIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 158
           L + FS +G ++ + KI+ D +TG S+G+ F+ FAS +A   AIEAMNGQ L
Sbjct: 116 LYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYL 167



 Score = 38.5 bits (88), Expect = 0.005
 Identities = 19/47 (40%), Positives = 29/47 (61%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMN 146
           L   F + G V+++ +  DR TG+ +G+GFV F S+E    AI+ MN
Sbjct: 29  LWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMN 75

---

>EPAB_XENTR (Q6DEY7) Embryonic polyadenylate-binding protein (Embryonic poly(A)|
           binding protein) (ePABP)
          Length = 629

 Score = 49.3 bits (116), Expect = 3e-06
 Identities = 21/52 (40%), Positives = 37/52 (71%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           L+  FS +G+ +  K++ D +TGRSRGFGFV + + E  ++A+  MNG++++
Sbjct: 207 LREIFSAFGNTLSVKVMMD-DTGRSRGFGFVNYGNHEEAQKAVSEMNGKEVN 257



 Score = 45.8 bits (107), Expect = 3e-05
 Identities = 22/49 (44%), Positives = 32/49 (65%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQ 152
           L+  FS YG +  +K++T  E G S+GFGFV F+S E   +A+  MNG+
Sbjct: 310 LRKEFSPYGTITSAKVMT--EGGHSKGFGFVCFSSPEEATKAVTEMNGR 356



 Score = 44.7 bits (104), Expect = 7e-05
 Identities = 21/53 (39%), Positives = 34/53 (64%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           +L + FS +G+++  K++ D     SRG+GFV F + EA  +AI+ MNG  L+
Sbjct: 114 ALYDTFSAFGNILSCKVVCDEHG--SRGYGFVHFETQEAANRAIQTMNGMLLN 164

---

>HNRPD_RAT (Q9JJ54) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)|
           (AU-rich element RNA-binding protein 1)
          Length = 353

 Score = 49.3 bits (116), Expect = 3e-06
 Identities = 26/56 (46%), Positives = 36/56 (64%), Gaps = 4/56 (7%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTF----ASDEAMRQAIEAMNGQDLD 161
           L++ FSK+GDV+D  +  D  TGRSRGFGFV F    + D+ M Q    +NG+ +D
Sbjct: 111 LKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVID 166



 Score = 33.5 bits (75), Expect = 0.15
 Identities = 13/44 (29%), Positives = 27/44 (61%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIE 137
           ++  F  +G+V   ++  D +T + RGF F+TF  +E +++ +E
Sbjct: 196 IREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 239

---

>PABP5_ARATH (Q05196) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 668

 Score = 48.9 bits (115), Expect = 4e-06
 Identities = 24/51 (47%), Positives = 32/51 (62%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 158
           L+  F KYGD+  + ++ D ++G SR FGFV F S EA   A+E MNG  L
Sbjct: 241 LKKTFGKYGDISSAVVMKD-QSGNSRSFGFVNFVSPEAAAVAVEKMNGISL 290



 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 20/53 (37%), Positives = 32/53 (60%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           +L   FS +G ++  K+  D   GRS+G+GFV F  +E  + AI+ +NG  L+
Sbjct: 147 ALYETFSSFGTILSCKVAMD-VVGRSKGYGFVQFEKEETAQAAIDKLNGMLLN 198



 Score = 41.6 bits (96), Expect = 6e-04
 Identities = 20/49 (40%), Positives = 33/49 (67%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQ 152
           L+  FS+YG+V   K++ + + G SRGFGFV +++ E    A++ MNG+
Sbjct: 344 LKEMFSEYGNVTSCKVMMNSQ-GLSRGFGFVAYSNPEEALLAMKEMNGK 391

---

>RNPC1_HUMAN (Q9H0Z9) RNA-binding region-containing protein 1 (HSRNASEB) (ssDNA|
           binding protein SEB4) (CLL-associated antigen KW-5)
          Length = 216

 Score = 48.9 bits (115), Expect = 4e-06
 Identities = 22/48 (45%), Positives = 33/48 (68%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMN 146
           SL+  F  +GD+ ++ +ITDR+TG+SRG+GFVT A   A  +A +  N
Sbjct: 26  SLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPN 73

---

>PABP2_ARATH (P42731) Polyadenylate-binding protein 2 (Poly(A)-binding protein|
           2) (PABP 2)
          Length = 629

 Score = 48.5 bits (114), Expect = 5e-06
 Identities = 20/53 (37%), Positives = 39/53 (73%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           +L + FS +G+++  K+  D  +G+S+G+GFV +A++E+ ++AIE +NG  L+
Sbjct: 139 ALHDTFSSFGNIVSCKVAVD-SSGQSKGYGFVQYANEESAQKAIEKLNGMLLN 190



 Score = 47.8 bits (112), Expect = 8e-06
 Identities = 21/52 (40%), Positives = 35/52 (67%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           L+NAF +YG +  + ++ D E G+S+GFGFV F + +   +A+E++NG   D
Sbjct: 231 LKNAFGEYGKITSAVVMKDGE-GKSKGFGFVNFENADDAARAVESLNGHKFD 281



 Score = 38.9 bits (89), Expect = 0.004
 Identities = 19/52 (36%), Positives = 32/52 (61%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           L+  FS +G V  SK++ D   G S+G GFV FA+ E   +A+  ++G+ ++
Sbjct: 334 LKEIFSPFGTVTSSKVMRD-PNGTSKGSGFVAFATPEEATEAMSQLSGKMIE 384

---

>PABP_DROME (P21187) Polyadenylate-binding protein (Poly(A)-binding protein)|
           (PABP)
          Length = 634

 Score = 48.5 bits (114), Expect = 5e-06
 Identities = 21/51 (41%), Positives = 35/51 (68%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 158
           L+  F  YG +   K+++ +E G+S+GFGFV F + EA   A++A+NG+D+
Sbjct: 199 LKEFFEPYGKITSYKVMS-KEDGKSKGFGFVAFETTEAAEAAVQALNGKDM 248



 Score = 45.4 bits (106), Expect = 4e-05
 Identities = 22/49 (44%), Positives = 33/49 (67%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQ 152
           L+ AFS YG++  +K++TD E GRS+GFGFV F +      A+  +NG+
Sbjct: 303 LRIAFSPYGNITSAKVMTDEE-GRSKGFGFVCFNAASEATCAVTELNGR 350



 Score = 45.4 bits (106), Expect = 4e-05
 Identities = 20/53 (37%), Positives = 36/53 (67%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           ++ + FS +G+++  K+ TD E G S+G+GFV F ++EA   +I+ +NG  L+
Sbjct: 105 AIYDTFSAFGNILSCKVATD-EKGNSKGYGFVHFETEEAANTSIDKVNGMLLN 156

---

>RBPA_SYNY3 (Q57014) Putative RNA-binding protein rbpA|
          Length = 101

 Score = 48.5 bits (114), Expect = 5e-06
 Identities = 24/50 (48%), Positives = 32/50 (64%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQD 155
           L   F++YG V   ++ TDRETGR RGFGFV   +D     AIEA++G +
Sbjct: 17  LTAVFAEYGSVKRVQLPTDRETGRMRGFGFVELEADAEETAAIEALDGAE 66

---

>ELAV2_RAT (Q8CH84) ELAV-like protein 2 (Hu-antigen B) (HuB)|
          Length = 359

 Score = 48.1 bits (113), Expect = 6e-06
 Identities = 22/49 (44%), Positives = 32/49 (65%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQ 152
           L+  FS+YG +I S+I+ D+ TG SRG GF+ F       +AI+ +NGQ
Sbjct: 141 LEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 189



 Score = 40.0 bits (92), Expect = 0.002
 Identities = 16/48 (33%), Positives = 29/48 (60%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNG 149
           L++ F   G++   K++ D+ TG+S G+GFV +   +   +AI  +NG
Sbjct: 55  LKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNG 102



 Score = 39.3 bits (90), Expect = 0.003
 Identities = 19/51 (37%), Positives = 28/51 (54%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 158
           L   F  +G V + K+I D  T + +GFGFVT  + +    AI ++NG  L
Sbjct: 292 LWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRL 342

---

>ELAV2_PONPY (Q5R9Z6) ELAV-like protein 2|
          Length = 359

 Score = 48.1 bits (113), Expect = 6e-06
 Identities = 22/49 (44%), Positives = 32/49 (65%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQ 152
           L+  FS+YG +I S+I+ D+ TG SRG GF+ F       +AI+ +NGQ
Sbjct: 141 LEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 189



 Score = 40.0 bits (92), Expect = 0.002
 Identities = 16/48 (33%), Positives = 29/48 (60%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNG 149
           L++ F   G++   K++ D+ TG+S G+GFV +   +   +AI  +NG
Sbjct: 55  LKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNG 102



 Score = 39.3 bits (90), Expect = 0.003
 Identities = 19/51 (37%), Positives = 28/51 (54%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 158
           L   F  +G V + K+I D  T + +GFGFVT  + +    AI ++NG  L
Sbjct: 292 LWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRL 342

---

>ELAV2_HUMAN (Q12926) ELAV-like protein 2 (Hu-antigen B) (HuB) (ELAV-like|
           neuronal protein 1) (Nervous system-specific RNA-binding
           protein Hel-N1)
          Length = 359

 Score = 48.1 bits (113), Expect = 6e-06
 Identities = 22/49 (44%), Positives = 32/49 (65%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQ 152
           L+  FS+YG +I S+I+ D+ TG SRG GF+ F       +AI+ +NGQ
Sbjct: 141 LEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 189



 Score = 40.0 bits (92), Expect = 0.002
 Identities = 16/48 (33%), Positives = 29/48 (60%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNG 149
           L++ F   G++   K++ D+ TG+S G+GFV +   +   +AI  +NG
Sbjct: 55  LKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNG 102



 Score = 39.3 bits (90), Expect = 0.003
 Identities = 19/51 (37%), Positives = 28/51 (54%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 158
           L   F  +G V + K+I D  T + +GFGFVT  + +    AI ++NG  L
Sbjct: 292 LWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRL 342

---

>ELAV2_MOUSE (Q60899) ELAV-like protein 2 (Hu-antigen B) (HuB) (ELAV-like|
           neuronal protein 1) (Nervous system-specific RNA-binding
           protein Mel-N1)
          Length = 360

 Score = 48.1 bits (113), Expect = 6e-06
 Identities = 22/49 (44%), Positives = 32/49 (65%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQ 152
           L+  FS+YG +I S+I+ D+ TG SRG GF+ F       +AI+ +NGQ
Sbjct: 141 LEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 189



 Score = 40.0 bits (92), Expect = 0.002
 Identities = 16/48 (33%), Positives = 29/48 (60%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNG 149
           L++ F   G++   K++ D+ TG+S G+GFV +   +   +AI  +NG
Sbjct: 55  LKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNG 102



 Score = 39.3 bits (90), Expect = 0.003
 Identities = 19/51 (37%), Positives = 28/51 (54%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 158
           L   F  +G V + K+I D  T + +GFGFVT  + +    AI ++NG  L
Sbjct: 293 LWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRL 343

---

>ELAV4_HUMAN (P26378) ELAV-like protein 4 (Paraneoplastic encephalomyelitis|
           antigen HuD) (Hu-antigen D)
          Length = 380

 Score = 48.1 bits (113), Expect = 6e-06
 Identities = 22/49 (44%), Positives = 32/49 (65%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQ 152
           L+  FS+YG +I S+I+ D+ TG SRG GF+ F       +AI+ +NGQ
Sbjct: 148 LEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ 196



 Score = 38.5 bits (88), Expect = 0.005
 Identities = 19/51 (37%), Positives = 28/51 (54%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 158
           L   F  +G V + K+I D  T + +GFGFVT  + +    AI ++NG  L
Sbjct: 313 LWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRL 363



 Score = 38.5 bits (88), Expect = 0.005
 Identities = 15/47 (31%), Positives = 28/47 (59%)
 Frame = +3

Query: 9   QNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNG 149
           ++ F   G++   K++ D+ TG+S G+GFV +   +   +AI  +NG
Sbjct: 63  RSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNG 109

---

>ELAV4_RAT (O09032) ELAV-like protein 4 (Paraneoplastic encephalomyelitis|
           antigen HuD) (Hu-antigen D)
          Length = 373

 Score = 48.1 bits (113), Expect = 6e-06
 Identities = 22/49 (44%), Positives = 32/49 (65%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQ 152
           L+  FS+YG +I S+I+ D+ TG SRG GF+ F       +AI+ +NGQ
Sbjct: 141 LEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ 189



 Score = 38.5 bits (88), Expect = 0.005
 Identities = 19/51 (37%), Positives = 28/51 (54%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 158
           L   F  +G V + K+I D  T + +GFGFVT  + +    AI ++NG  L
Sbjct: 306 LWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRL 356



 Score = 38.5 bits (88), Expect = 0.005
 Identities = 15/47 (31%), Positives = 28/47 (59%)
 Frame = +3

Query: 9   QNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNG 149
           ++ F   G++   K++ D+ TG+S G+GFV +   +   +AI  +NG
Sbjct: 56  RSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNG 102

---

>RNPC1_MOUSE (Q62176) RNA-binding region-containing protein 1 (ssDNA binding|
           protein SEB4)
          Length = 237

 Score = 48.1 bits (113), Expect = 6e-06
 Identities = 22/48 (45%), Positives = 33/48 (68%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMN 146
           SL+  F  +GD+ ++ +ITDR+TG+SRG+GFVT A   A  +A +  N
Sbjct: 47  SLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAADRACKDPN 94

---

>ELAV4_MOUSE (Q61701) ELAV-like protein 4 (Paraneoplastic encephalomyelitis|
           antigen HuD) (Hu-antigen D)
          Length = 385

 Score = 48.1 bits (113), Expect = 6e-06
 Identities = 22/49 (44%), Positives = 32/49 (65%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQ 152
           L+  FS+YG +I S+I+ D+ TG SRG GF+ F       +AI+ +NGQ
Sbjct: 153 LEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ 201



 Score = 38.5 bits (88), Expect = 0.005
 Identities = 19/51 (37%), Positives = 28/51 (54%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 158
           L   F  +G V + K+I D  T + +GFGFVT  + +    AI ++NG  L
Sbjct: 318 LWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRL 368



 Score = 38.5 bits (88), Expect = 0.005
 Identities = 15/47 (31%), Positives = 28/47 (59%)
 Frame = +3

Query: 9   QNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNG 149
           ++ F   G++   K++ D+ TG+S G+GFV +   +   +AI  +NG
Sbjct: 68  RSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNG 114

---

>HNRPD_MOUSE (Q60668) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)|
           (AU-rich element RNA-binding protein 1)
          Length = 355

 Score = 47.8 bits (112), Expect = 8e-06
 Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 4/56 (7%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTF----ASDEAMRQAIEAMNGQDLD 161
           L++ FSK+G+V+D  +  D  TGRSRGFGFV F    + D+ M Q    +NG+ +D
Sbjct: 113 LKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVID 168



 Score = 33.5 bits (75), Expect = 0.15
 Identities = 13/44 (29%), Positives = 27/44 (61%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIE 137
           ++  F  +G+V   ++  D +T + RGF F+TF  +E +++ +E
Sbjct: 198 IREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 241

---

>HNRPD_HUMAN (Q14103) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)|
           (AU-rich element RNA-binding protein 1)
          Length = 355

 Score = 47.8 bits (112), Expect = 8e-06
 Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 4/56 (7%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTF----ASDEAMRQAIEAMNGQDLD 161
           L++ FSK+G+V+D  +  D  TGRSRGFGFV F    + D+ M Q    +NG+ +D
Sbjct: 113 LKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVID 168



 Score = 33.5 bits (75), Expect = 0.15
 Identities = 13/44 (29%), Positives = 27/44 (61%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIE 137
           ++  F  +G+V   ++  D +T + RGF F+TF  +E +++ +E
Sbjct: 198 IREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 241

---

>EPABA_XENLA (Q98SP8) Embryonic polyadenylate-binding protein-A (Embryonic|
           poly(A) binding protein-A) (ePABP-A) (ePAB-A) (XePABP-A)
          Length = 629

 Score = 47.8 bits (112), Expect = 8e-06
 Identities = 20/52 (38%), Positives = 37/52 (71%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           L+  FS +G+ +  K++ D ++GRSRGFGFV + + E  ++A+  MNG++++
Sbjct: 207 LREIFSAFGNTLSVKVMMD-DSGRSRGFGFVNYGNHEEAQKAVSEMNGKEVN 257



 Score = 44.3 bits (103), Expect = 9e-05
 Identities = 21/53 (39%), Positives = 34/53 (64%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           +L + FS +G+++  K++ D     SRG+GFV F + EA  +AI+ MNG  L+
Sbjct: 114 ALYDTFSAFGNILSCKVVCDEHG--SRGYGFVHFETHEAANRAIQTMNGMLLN 164



 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 21/49 (42%), Positives = 31/49 (63%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQ 152
           L+  F  YG +  +K++T  E G S+GFGFV F+S E   +A+  MNG+
Sbjct: 310 LRKEFLPYGTITSAKVMT--EGGHSKGFGFVCFSSPEEATKAVTEMNGR 356

---

>YP85_CAEEL (Q09442) Putative RNA-binding protein C08B11.5|
          Length = 388

 Score = 47.8 bits (112), Expect = 8e-06
 Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
 Frame = +3

Query: 6   LQNAFSKYGDVID-SKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 158
           L + FS +G ++   KI+ D ++G S+GF F+ FAS EA   A+EAMNGQ L
Sbjct: 116 LYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQFL 167



 Score = 31.6 bits (70), Expect = 0.58
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +3

Query: 30  GDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMN 146
           G V+   +  DR T   +GFGFV F  +E    AI+ +N
Sbjct: 37  GPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKILN 75

---

>ELAV3_MOUSE (Q60900) ELAV-like protein 3 (Hu-antigen C) (HuC)|
          Length = 367

 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 21/49 (42%), Positives = 32/49 (65%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQ 152
           ++  FS+YG +I S+I+ D+ TG SRG GF+ F       +AI+ +NGQ
Sbjct: 141 MEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQ 189



 Score = 40.0 bits (92), Expect = 0.002
 Identities = 17/50 (34%), Positives = 29/50 (58%)
 Frame = +3

Query: 9   QNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 158
           ++ F   GD+   K++ D+ TG+S G+GFV ++      +AI  +NG  L
Sbjct: 56  KSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKL 105



 Score = 38.9 bits (89), Expect = 0.004
 Identities = 19/51 (37%), Positives = 28/51 (54%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 158
           L   F  +G V + K+I D  T + +GFGFVT  + +    AI ++NG  L
Sbjct: 300 LWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRL 350

---

>ELAV3_HUMAN (Q14576) ELAV-like protein 3 (Hu-antigen C) (HuC) (Paraneoplastic|
           cerebellar degeneration-associated antigen)
           (Paraneoplastic limbic encephalitis antigen 21)
          Length = 367

 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 21/49 (42%), Positives = 32/49 (65%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQ 152
           ++  FS+YG +I S+I+ D+ TG SRG GF+ F       +AI+ +NGQ
Sbjct: 141 MEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ 189



 Score = 40.0 bits (92), Expect = 0.002
 Identities = 17/50 (34%), Positives = 29/50 (58%)
 Frame = +3

Query: 9   QNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 158
           ++ F   GD+   K++ D+ TG+S G+GFV ++      +AI  +NG  L
Sbjct: 56  KSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKL 105



 Score = 38.9 bits (89), Expect = 0.004
 Identities = 19/51 (37%), Positives = 28/51 (54%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 158
           L   F  +G V + K+I D  T + +GFGFVT  + +    AI ++NG  L
Sbjct: 300 LWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRL 350

---

>RB27C_DROME (P48809) Heterogeneous nuclear ribonucleoprotein 27C (Hrb27-C)|
           (hnRNP 48) (HRP48.1)
          Length = 421

 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 4/57 (7%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFAS----DEAMRQAIEAMNGQDLD 161
           +L   F ++GD+ID  ++ + E+GRSRGFGFVTFA     +  ++     ++G+ +D
Sbjct: 22  NLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTID 78



 Score = 37.0 bits (84), Expect = 0.014
 Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEA----MNGQDLD 161
           L+  F++YG V +  I+ D+E  +SRGFGF++F  + ++          +NG+ ++
Sbjct: 112 LRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVE 167

---

>NUCL_MOUSE (P09405) Nucleolin (Protein C23)|
          Length = 706

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 21/41 (51%), Positives = 30/41 (73%)
 Frame = +3

Query: 39  IDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           + ++I+TDRETG S+GFGFV F S+E  + A EAM   ++D
Sbjct: 592 VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEID 632

---

>NUCL_RAT (P13383) Nucleolin (Protein C23)|
          Length = 712

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 21/41 (51%), Positives = 30/41 (73%)
 Frame = +3

Query: 39  IDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           + ++I+TDRETG S+GFGFV F S+E  + A EAM   ++D
Sbjct: 598 VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEID 638



 Score = 29.3 bits (64), Expect = 2.9
 Identities = 10/30 (33%), Positives = 21/30 (70%)
 Frame = +3

Query: 72  GRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           G+S+G+ F+ FAS E  ++A+ + N  +++
Sbjct: 522 GKSKGYAFIEFASFEDAKEALNSCNKMEIE 551

---

>GAR2_SCHPO (P41891) Protein gar2|
          Length = 500

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 18/52 (34%), Positives = 35/52 (67%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           L   F +YG ++ +++I D ++GRS+G+G+V F + EA + A+ A   +++D
Sbjct: 279 LGQEFEEYGTIVGARVIMDGQSGRSKGYGYVDFETPEAAKAAVAANGTKEID 330



 Score = 41.6 bits (96), Expect = 6e-04
 Identities = 19/48 (39%), Positives = 32/48 (66%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNG 149
           L  AF   GD+   ++ TD ++GR +GFG+VTF+  ++ ++ +E MNG
Sbjct: 382 LSTAFGGCGDIQSIRLPTDPQSGRLKGFGYVTFSDIDSAKKCVE-MNG 428

---

>NUCL_MESAU (P08199) Nucleolin (Protein C23)|
          Length = 713

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 21/41 (51%), Positives = 30/41 (73%)
 Frame = +3

Query: 39  IDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           + ++I+TDRETG S+GFGFV F S+E  + A EAM   ++D
Sbjct: 595 VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEID 635



 Score = 30.4 bits (67), Expect = 1.3
 Identities = 10/36 (27%), Positives = 23/36 (63%)
 Frame = +3

Query: 54  ITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           +   + G+S+G+ F+ FAS E  ++A+ + N  +++
Sbjct: 513 VPQNQQGKSKGYAFIEFASFEDAKEALNSCNKMEIE 548

---

>NUCL_HUMAN (P19338) Nucleolin (Protein C23)|
          Length = 709

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 21/41 (51%), Positives = 30/41 (73%)
 Frame = +3

Query: 39  IDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           + ++I+TDRETG S+GFGFV F S+E  + A EAM   ++D
Sbjct: 595 VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEID 635



 Score = 31.2 bits (69), Expect = 0.76
 Identities = 10/36 (27%), Positives = 24/36 (66%)
 Frame = +3

Query: 54  ITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           +   + G+S+G+ F+ FAS E  ++A+ + N ++++
Sbjct: 513 VPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIE 548

---

>NUCL_CHICK (P15771) Nucleolin (Protein C23)|
          Length = 694

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 21/41 (51%), Positives = 30/41 (73%)
 Frame = +3

Query: 39  IDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           I ++I+TDR+TG S+GFGFV F+S E  + A EAM   ++D
Sbjct: 577 ISARIVTDRDTGSSKGFGFVDFSSPEDAKAAKEAMEDGEID 617

---

>NUCL_PONPY (Q5RF26) Nucleolin|
          Length = 711

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 21/41 (51%), Positives = 30/41 (73%)
 Frame = +3

Query: 39  IDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           + ++I+TDRETG S+GFGFV F S+E  + A EAM   ++D
Sbjct: 597 VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEID 637



 Score = 31.2 bits (69), Expect = 0.76
 Identities = 10/36 (27%), Positives = 24/36 (66%)
 Frame = +3

Query: 54  ITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           +   + G+S+G+ F+ FAS E  ++A+ + N ++++
Sbjct: 515 VPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIE 550

---

>NUCL_MACFA (Q4R4J7) Nucleolin|
          Length = 710

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 21/41 (51%), Positives = 30/41 (73%)
 Frame = +3

Query: 39  IDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           + ++I+TDRETG S+GFGFV F S+E  + A EAM   ++D
Sbjct: 596 VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEID 636



 Score = 31.2 bits (69), Expect = 0.76
 Identities = 10/36 (27%), Positives = 24/36 (66%)
 Frame = +3

Query: 54  ITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           +   + G+S+G+ F+ FAS E  ++A+ + N ++++
Sbjct: 514 VPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIE 549

---

>EPABB_XENLA (Q6GR16) Embryonic polyadenylate-binding protein-B (Embryonic|
           poly(A) binding protein-B) (ePABP-B) (ePAB-B) (XePABP-B)
          Length = 629

 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 20/52 (38%), Positives = 36/52 (69%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           L+  FS +G+ +  K++ D  +GRSRGFGFV + + E  ++A+  MNG++++
Sbjct: 207 LKEIFSAFGNTLSVKVMMDN-SGRSRGFGFVNYGNHEEAQKAVTEMNGKEVN 257



 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 24/53 (45%), Positives = 36/53 (67%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           +L + FS +GD++  K++ D E G SRG+GFV F + EA  +AI+ MNG  L+
Sbjct: 114 ALYDTFSAFGDILSCKVVCD-EYG-SRGYGFVHFETQEAANRAIQTMNGMLLN 164



 Score = 45.8 bits (107), Expect = 3e-05
 Identities = 22/49 (44%), Positives = 32/49 (65%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQ 152
           L+  FS YG +  +K++T  E G S+GFGFV F+S E   +A+  MNG+
Sbjct: 310 LRKEFSPYGTITSTKVMT--EGGHSKGFGFVCFSSPEEATKAVTEMNGR 356

---

>HRP1_YEAST (Q99383) Nuclear polyadenylated RNA-binding protein 4 (Cleavage|
           factor IB) (CFIB)
          Length = 534

 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 18/35 (51%), Positives = 31/35 (88%)
 Frame = +3

Query: 18  FSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAM 122
           FS++G +ID++++ D++TG+SRGFGFVT+ S +A+
Sbjct: 263 FSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAV 297



 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 20/48 (41%), Positives = 31/48 (64%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMN 146
           +L+  F KYG V D KI+ D  TGRSRGFGF++F    ++ + ++  +
Sbjct: 174 NLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKTQH 221

---

>PABP4_HUMAN (Q13310) Polyadenylate-binding protein 4 (Poly(A)-binding protein|
           4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP)
           (Activated-platelet protein 1) (APP-1)
          Length = 644

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 20/52 (38%), Positives = 35/52 (67%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 158
           SL+  FS++G  +  K++ D   G+S+GFGFV++   E   +A+E MNG+++
Sbjct: 206 SLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKEI 256



 Score = 44.7 bits (104), Expect = 7e-05
 Identities = 21/49 (42%), Positives = 32/49 (65%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQ 152
           L+  FS +G +  +K++   E GRS+GFGFV F+S E   +A+  MNG+
Sbjct: 310 LRKEFSPFGSITSAKVML--EDGRSKGFGFVCFSSPEEATKAVTEMNGR 356



 Score = 42.0 bits (97), Expect = 4e-04
 Identities = 22/53 (41%), Positives = 35/53 (66%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           +L + FS +G+++  K++ D E G S+G+ FV F + EA  +AIE MNG  L+
Sbjct: 114 ALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEKMNGMLLN 164

---

>SXL_MUSDO (O17310) Sex-lethal homolog|
          Length = 324

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 20/47 (42%), Positives = 29/47 (61%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMN 146
           L+  F KYG+++   I+ D+ TGR RG  FV F   E  ++AI A+N
Sbjct: 204 LEKIFGKYGNIVQKNILRDKLTGRPRGVAFVRFNKREEAQEAISALN 250



 Score = 34.3 bits (77), Expect = 0.090
 Identities = 17/44 (38%), Positives = 26/44 (59%)
 Frame = +3

Query: 18  FSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNG 149
           F   G +   +I+ D +TG S G+ FV FAS+   + AI+ +NG
Sbjct: 122 FRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKTVNG 165

---

>PABPX_ARATH (Q9ZQA8) Probable polyadenylate-binding protein At2g36660|
           (Poly(A)-binding protein At2g36660) (PABP)
          Length = 609

 Score = 45.8 bits (107), Expect = 3e-05
 Identities = 20/47 (42%), Positives = 32/47 (68%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMN 146
           LQ+ F K+G+++  K+ T  E G+SRG+GFV F  ++A   AI+ +N
Sbjct: 128 LQDMFKKFGNIVSCKVAT-LEDGKSRGYGFVQFEQEDAAHAAIQTLN 173



 Score = 40.4 bits (93), Expect = 0.001
 Identities = 19/49 (38%), Positives = 32/49 (65%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQ 152
           L+  FS+ G +  +K++ D E G+S+GFGFV F++ E    A++  +GQ
Sbjct: 320 LRKHFSQCGTITSTKLMCD-EKGKSKGFGFVCFSTPEEAIDAVKTFHGQ 367



 Score = 33.9 bits (76), Expect = 0.12
 Identities = 17/48 (35%), Positives = 27/48 (56%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNG 149
           L+  F+++G ++   I  D E    RG+ FV F + E  R+A E +NG
Sbjct: 217 LREKFAEFGKIVSLAIAKD-ENRLCRGYAFVNFDNPEDARRAAETVNG 263



 Score = 30.4 bits (67), Expect = 1.3
 Identities = 15/52 (28%), Positives = 27/52 (51%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           L +AF+++  +   ++  D  +GRS  +G+  F S +    AIE  N   L+
Sbjct: 40  LYDAFAEFKSLTSVRLCKDASSGRSLCYGYANFLSRQDANLAIEKKNNSLLN 91

---

>NUCL_XENLA (P20397) Nucleolin (Protein C23)|
          Length = 650

 Score = 45.4 bits (106), Expect = 4e-05
 Identities = 19/41 (46%), Positives = 31/41 (75%)
 Frame = +3

Query: 39  IDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           ++++I+TDR+TG S+GFGFV F++ E  + A EAM   ++D
Sbjct: 526 VNARIVTDRDTGASKGFGFVDFSTAEDAKAAKEAMEDGEID 566



 Score = 30.4 bits (67), Expect = 1.3
 Identities = 15/53 (28%), Positives = 29/53 (54%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           SL+  F K      + I   +  GR++GF F+ F+S E  + A+++ N  +++
Sbjct: 429 SLREVFEKA-----TSIRIPQNQGRAKGFAFIEFSSAEDAKDAMDSCNNTEIE 476

---

>RO22_XENLA (P51990) Heterogeneous nuclear ribonucleoprotein A2 homolog 2|
           (hnRNP A2(B))
          Length = 358

 Score = 45.4 bits (106), Expect = 4e-05
 Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFAS----DEAMRQAIEAMNGQDLD 161
           L+  F +YG +  ++IITD+++G+ RGFGFVTF      D+ + Q    +NG + +
Sbjct: 116 LREYFEEYGKIESTEIITDKQSGKKRGFGFVTFNDHDPVDKIVLQKYHTINGHNAE 171



 Score = 38.9 bits (89), Expect = 0.004
 Identities = 18/46 (39%), Positives = 29/46 (63%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEA 140
           SL+N + ++G + D  ++ D  + RSRGFGFVTF+    +  A+ A
Sbjct: 24  SLRNFYEQWGQLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMSA 69

---

>ROA2_HUMAN (P22626) Heterogeneous nuclear ribonucleoproteins A2/B1 (hnRNP A2 /|
           hnRNP B1)
          Length = 353

 Score = 45.4 bits (106), Expect = 4e-05
 Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFAS----DEAMRQAIEAMNGQDLD 161
           L++ F +YG +   +IITDR++G+ RGFGFVTF      D+ + Q    +NG + +
Sbjct: 128 LRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAE 183



 Score = 40.4 bits (93), Expect = 0.001
 Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFAS----DEAMRQAIEAMNGQ 152
           SL+N + ++G + D  ++ D  + RSRGFGFVTF+S    D AM     +++G+
Sbjct: 36  SLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDGR 89

---

>ROA2_MOUSE (O88569) Heterogeneous nuclear ribonucleoproteins A2/B1 (hnRNP A2 /|
           hnRNP B1)
          Length = 341

 Score = 45.4 bits (106), Expect = 4e-05
 Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFAS----DEAMRQAIEAMNGQDLD 161
           L++ F +YG +   +IITDR++G+ RGFGFVTF      D+ + Q    +NG + +
Sbjct: 116 LRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAE 171



 Score = 40.4 bits (93), Expect = 0.001
 Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFAS----DEAMRQAIEAMNGQ 152
           SL+N + ++G + D  ++ D  + RSRGFGFVTF+S    D AM     +++G+
Sbjct: 24  SLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDGR 77

---

>NSR1_YEAST (P27476) Nuclear localization sequence-binding protein (P67)|
          Length = 414

 Score = 45.4 bits (106), Expect = 4e-05
 Identities = 20/52 (38%), Positives = 33/52 (63%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           L+  F   G VI +++I +R T RSRG+G+V F +     +AI+ M G+++D
Sbjct: 184 LKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQEMQGKEID 235



 Score = 44.3 bits (103), Expect = 9e-05
 Identities = 18/48 (37%), Positives = 35/48 (72%)
 Frame = +3

Query: 18  FSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           F+K+G+V+  +I T  ET + +GFG+V F++ E  ++A++A+ G+ +D
Sbjct: 287 FAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGEYID 334

---

>TIA1_MOUSE (P52912) Nucleolysin TIA-1 (RNA-binding protein TIA-1)|
          Length = 386

 Score = 45.1 bits (105), Expect = 5e-05
 Identities = 18/49 (36%), Positives = 33/49 (67%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQ 152
           ++ AF+ +G + D++++ D  TG+S+G+GFV+F +      AI+ M GQ
Sbjct: 122 IKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQ 170

---

>TIA1_HUMAN (P31483) Nucleolysin TIA-1 isoform p40 (RNA-binding protein TIA-1)|
           (p40-TIA-1) [Contains: Nucleolysin TIA-1 isoform p15
           (p15-TIA-1)]
          Length = 386

 Score = 45.1 bits (105), Expect = 5e-05
 Identities = 18/49 (36%), Positives = 33/49 (67%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQ 152
           ++ AF+ +G + D++++ D  TG+S+G+GFV+F +      AI+ M GQ
Sbjct: 122 IKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQ 170

---

>ROAA_MOUSE (Q99020) Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B)|
           (CArG-binding factor-A) (CBF-A)
          Length = 285

 Score = 45.1 bits (105), Expect = 5e-05
 Identities = 18/44 (40%), Positives = 30/44 (68%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIE 137
           L++ F+K+G+V+D  I  D  TGRSRGFGF+ F    ++ + ++
Sbjct: 91  LKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLD 134



 Score = 30.0 bits (66), Expect = 1.7
 Identities = 10/44 (22%), Positives = 27/44 (61%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIE 137
           ++  F ++G++   ++  D +  + RGF F+TF  ++ +++ +E
Sbjct: 175 IREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLE 218

---

>RRP2_SPIOL (P82277) Plastid-specific 30S ribosomal protein 2, chloroplast|
           precursor (PSRP-2)
          Length = 260

 Score = 45.1 bits (105), Expect = 5e-05
 Identities = 21/52 (40%), Positives = 35/52 (67%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           L++ FS+ G V+ +K+     T +S GFGFV+F+S+E +  AI+A+N   L+
Sbjct: 200 LKDFFSEKGKVLGAKVQRTPGTSKSNGFGFVSFSSEEEVEAAIQALNNSVLE 251



 Score = 35.0 bits (79), Expect = 0.053
 Identities = 16/51 (31%), Positives = 30/51 (58%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 158
           L+    ++G +  ++++ D+ +GRSR FGFVT  + E     IE +N  ++
Sbjct: 100 LRTIVEEHGAIEIAEVMYDKYSGRSRRFGFVTMKTVEDANAVIEKLNDTEI 150

---

>YDB2_SCHPO (Q10355) Hypothetical RNA-binding protein C22E12.02 in chromosome I|
          Length = 219

 Score = 45.1 bits (105), Expect = 5e-05
 Identities = 21/50 (42%), Positives = 33/50 (66%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQ 152
           SL  AFS+Y  ++ +K++ DRE G++RGFGFV+F   +   +A    NG+
Sbjct: 45  SLYQAFSEYPSLVKTKVVRDRE-GKTRGFGFVSFKDSDQFLKAWREKNGK 93

---

>SXL_CHRRU (O97018) Sex-lethal homolog|
          Length = 307

 Score = 45.1 bits (105), Expect = 5e-05
 Identities = 19/47 (40%), Positives = 29/47 (61%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMN 146
           L+  F KYG+++   I+ D+ TG+ RG  FV F   E  ++AI A+N
Sbjct: 187 LEKIFGKYGNIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAISALN 233



 Score = 35.0 bits (79), Expect = 0.053
 Identities = 17/44 (38%), Positives = 27/44 (61%)
 Frame = +3

Query: 18  FSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNG 149
           F   G +   +I+ D +TG S G+ FV FAS+   + AI+++NG
Sbjct: 105 FRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKSLNG 148

---

>TIAR_HUMAN (Q01085) Nucleolysin TIAR (TIA-1-related protein)|
          Length = 375

 Score = 44.7 bits (104), Expect = 7e-05
 Identities = 18/49 (36%), Positives = 33/49 (67%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQ 152
           +++AF+ +G + D++++ D  TG+S+G+GFV+F +      AI  M GQ
Sbjct: 113 IKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQ 161

---

>TIAR_MOUSE (P70318) Nucleolysin TIAR (TIA-1-related protein)|
          Length = 392

 Score = 44.7 bits (104), Expect = 7e-05
 Identities = 18/49 (36%), Positives = 33/49 (67%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQ 152
           +++AF+ +G + D++++ D  TG+S+G+GFV+F +      AI  M GQ
Sbjct: 130 IKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQ 178

---

>CSTFT_MOUSE (Q8C7E9) Cleavage stimulation factor, 64 kDa subunit, tau variant|
           (CSTF 64 kDa subunit, tau variant) (CF-1 64 kDa subunit,
           tau variant) (TauCstF-64)
          Length = 632

 Score = 44.7 bits (104), Expect = 7e-05
 Identities = 17/50 (34%), Positives = 32/50 (64%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQD 155
           L++ FS+ G V+  +++ DRETG+ +G+GF  +   E    A+  +NG++
Sbjct: 32  LKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGRE 81

---

>CSTFT_HUMAN (Q9H0L4) Cleavage stimulation factor, 64 kDa subunit, tau variant|
           (CSTF 64 kDa subunit, tau variant) (CF-1 64 kDa subunit,
           tau variant) (TauCstF-64)
          Length = 616

 Score = 44.7 bits (104), Expect = 7e-05
 Identities = 17/50 (34%), Positives = 32/50 (64%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQD 155
           L++ FS+ G V+  +++ DRETG+ +G+GF  +   E    A+  +NG++
Sbjct: 32  LKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGRE 81

---

>PABP3_ARATH (O64380) Polyadenylate-binding protein 3 (Poly(A)-binding protein|
           3) (PABP 3)
          Length = 660

 Score = 44.7 bits (104), Expect = 7e-05
 Identities = 21/49 (42%), Positives = 34/49 (69%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQ 152
           L+  FS+YG+V  SK++ + + G SRGFGFV +++ E   +A+  MNG+
Sbjct: 348 LKEMFSEYGNVTSSKVMLNPQ-GMSRGFGFVAYSNPEEALRALSEMNGK 395



 Score = 44.3 bits (103), Expect = 9e-05
 Identities = 20/49 (40%), Positives = 32/49 (65%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNG 149
           +L   FS +G ++  K+  D  TGRS+G+GFV F  +E+ + AI+ +NG
Sbjct: 151 ALFETFSSFGTILSCKVAMD-VTGRSKGYGFVQFEKEESAQAAIDKLNG 198



 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 23/51 (45%), Positives = 30/51 (58%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 158
           L+  F K+G VI S ++   ++G SR FGFV F   EA   A+E MNG  L
Sbjct: 245 LRKTFGKFG-VISSAVVMRDQSGNSRCFGFVNFECTEAAASAVEKMNGISL 294

---

>SXL_MEGSC (O01671) Sex-lethal homolog|
          Length = 321

 Score = 44.3 bits (103), Expect = 9e-05
 Identities = 18/47 (38%), Positives = 27/47 (57%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMN 146
           L+  F KYG ++   I+ D+ TG  RG  F+ F   E  ++AI A+N
Sbjct: 180 LETIFGKYGQIVQKNILRDKHTGTPRGVAFIRFNKREEAQEAISALN 226



 Score = 36.2 bits (82), Expect = 0.024
 Identities = 18/48 (37%), Positives = 27/48 (56%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNG 149
           L + F   G +   +I+ D +TG S G+GFV F S+    +AI  +NG
Sbjct: 94  LYSLFRTIGPINTCRIMRDYKTGYSYGYGFVDFGSEADALRAINNLNG 141

---

>MSI2H_MOUSE (Q920Q6) RNA-binding protein Musashi homolog 2 (Musashi-2)|
          Length = 346

 Score = 44.3 bits (103), Expect = 9e-05
 Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 4/57 (7%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFAS----DEAMRQAIEAMNGQDLD 161
           SL++ FSK+G++ +  ++ D  T RSRGFGFVTFA     D+ + Q    ++ + +D
Sbjct: 36  SLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTID 92



 Score = 40.4 bits (93), Expect = 0.001
 Identities = 16/40 (40%), Positives = 27/40 (67%)
 Frame = +3

Query: 18  FSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIE 137
           F ++G V D+ ++ D+ T R RGFGFVTF +++ + +  E
Sbjct: 130 FEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169

---

>MSI2H_HUMAN (Q96DH6) RNA-binding protein Musashi homolog 2 (Musashi-2)|
          Length = 328

 Score = 44.3 bits (103), Expect = 9e-05
 Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 4/57 (7%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFAS----DEAMRQAIEAMNGQDLD 161
           SL++ FSK+G++ +  ++ D  T RSRGFGFVTFA     D+ + Q    ++ + +D
Sbjct: 36  SLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTID 92



 Score = 40.4 bits (93), Expect = 0.001
 Identities = 16/40 (40%), Positives = 27/40 (67%)
 Frame = +3

Query: 18  FSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIE 137
           F ++G V D+ ++ D+ T R RGFGFVTF +++ + +  E
Sbjct: 130 FEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169

---

>CSTF2_MOUSE (Q8BIQ5) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa|
           subunit) (CF-1 64 kDa subunit) (CstF-64)
          Length = 580

 Score = 44.3 bits (103), Expect = 9e-05
 Identities = 17/50 (34%), Positives = 32/50 (64%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQD 155
           L++ FS+ G V+  +++ DRETG+ +G+GF  +   E    A+  +NG++
Sbjct: 32  LKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGRE 81

---

>ROA1_DROME (P07909) Heterogeneous nuclear ribonucleoprotein A1 (hnRNP core|
           protein A1-A) (PEN repeat clone P9)
          Length = 365

 Score = 44.3 bits (103), Expect = 9e-05
 Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFAS----DEAMRQAIEAMNGQDLD 161
           S+++ F  +G+++D  I+ D+ETG+ RGF FV F      D+ + Q    +NG+ +D
Sbjct: 137 SIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVD 193



 Score = 41.2 bits (95), Expect = 7e-04
 Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFAS----DEAMRQAIEAMNGQ 152
           +L+  F K+G+++D  ++ D  T RSRGFGF+T++     DEA +     ++G+
Sbjct: 46  NLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQKSRPHKIDGR 99

---

>CSTF2_BOVIN (Q8HXM1) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa|
           subunit) (CF-1 64 kDa subunit) (CstF-64)
          Length = 572

 Score = 44.3 bits (103), Expect = 9e-05
 Identities = 17/50 (34%), Positives = 32/50 (64%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQD 155
           L++ FS+ G V+  +++ DRETG+ +G+GF  +   E    A+  +NG++
Sbjct: 32  LKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGRE 81

---

>CSTF2_PONPY (Q5RDA3) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa|
           subunit) (CF-1 64 kDa subunit) (CstF-64)
          Length = 577

 Score = 44.3 bits (103), Expect = 9e-05
 Identities = 17/50 (34%), Positives = 32/50 (64%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQD 155
           L++ FS+ G V+  +++ DRETG+ +G+GF  +   E    A+  +NG++
Sbjct: 32  LKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGRE 81

---

>CSTF2_HUMAN (P33240) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa|
           subunit) (CF-1 64 kDa subunit) (CstF-64)
          Length = 577

 Score = 44.3 bits (103), Expect = 9e-05
 Identities = 17/50 (34%), Positives = 32/50 (64%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQD 155
           L++ FS+ G V+  +++ DRETG+ +G+GF  +   E    A+  +NG++
Sbjct: 32  LKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGRE 81

---

>ROAA_HUMAN (Q99729) Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B)|
           (APOBEC-1-binding protein 1) (ABBP-1)
          Length = 331

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 18/44 (40%), Positives = 30/44 (68%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIE 137
           L++ F+K+G+V+D  I  D  TGRSRGFGF+ F    ++ + ++
Sbjct: 84  LKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLD 127



 Score = 31.2 bits (69), Expect = 0.76
 Identities = 11/44 (25%), Positives = 27/44 (61%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIE 137
           ++  F ++G++   ++  D +  + RGF F+TF  +E +++ +E
Sbjct: 169 IREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 212

---

>DAZP1_MOUSE (Q9JII5) DAZ-associated protein 1 (Deleted in|
           azoospermia-associated protein 1)
          Length = 406

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 20/57 (35%), Positives = 36/57 (63%), Gaps = 4/57 (7%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAI----EAMNGQDLD 161
           +L++ FS+YG+V+D  I+ D+ T +SRGFGFV F     +   +      ++G+++D
Sbjct: 25  TLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNID 81



 Score = 40.4 bits (93), Expect = 0.001
 Identities = 18/43 (41%), Positives = 28/43 (65%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAI 134
           L+  F K+G V +  +I D E  R RGFGF+TF  ++++ QA+
Sbjct: 129 LREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 171

---

>ROA1_CAEEL (Q22037) Heterogeneous nuclear ribonucleoprotein A1|
          Length = 346

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTF----ASDEAMRQAIEAMNGQDLD 161
           L   F+KYG V  S+II D+ T + RGFGFVTF    + D+ + Q    +NG   D
Sbjct: 130 LTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCD 185



 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 21/56 (37%), Positives = 36/56 (64%), Gaps = 4/56 (7%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFAS----DEAMRQAIEAMNGQDLD 161
           ++  +S++G++ D  ++ D  T RSRGFGFVTF+     D AM+Q    ++G+ +D
Sbjct: 39  MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVD 94

---

>DAZP1_XENLA (Q98SJ2) DAZ-associated protein 1 (Deleted in|
           azoospermia-associated protein 1) (Proline-rich Vg1
           mRNA-binding protein)
          Length = 360

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 20/57 (35%), Positives = 36/57 (63%), Gaps = 4/57 (7%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAI----EAMNGQDLD 161
           +L++ FS+YG+V+D  I+ D+ T +SRGFGFV F     +   +      ++G+++D
Sbjct: 25  TLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNID 81



 Score = 39.7 bits (91), Expect = 0.002
 Identities = 17/43 (39%), Positives = 29/43 (67%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAI 134
           L+  F+++G V +  +I D E  R RGFGF+TF  ++++ QA+
Sbjct: 130 LKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 172

---

>YDC1_SCHPO (Q10422) Hypothetical RNA-binding protein C25G10.01 in chromosome I|
          Length = 297

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 21/50 (42%), Positives = 32/50 (64%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQD 155
           LQ  FSK+G V   +I+ +  T  SRGFGF++F++ E    AI+ +N Q+
Sbjct: 117 LQQIFSKFGTVTHVRIMREPVTKASRGFGFLSFSTVEEATSAIDNLNSQE 166

---

>SXL_DROSU (Q24668) Protein sex-lethal|
          Length = 354

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 19/47 (40%), Positives = 27/47 (57%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMN 146
           L   F KYG ++   I+ D+ TGR RG  FV +   E  ++AI A+N
Sbjct: 229 LDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALN 275



 Score = 34.3 bits (77), Expect = 0.090
 Identities = 16/44 (36%), Positives = 26/44 (59%)
 Frame = +3

Query: 18  FSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNG 149
           F   G +   +I+ D +TG S G+ FV F S+   ++AI+ +NG
Sbjct: 147 FRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVLNG 190

---

>SXL_DROME (P19339) Protein sex-lethal|
          Length = 354

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 19/47 (40%), Positives = 27/47 (57%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMN 146
           L   F KYG ++   I+ D+ TGR RG  FV +   E  ++AI A+N
Sbjct: 227 LDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALN 273



 Score = 34.3 bits (77), Expect = 0.090
 Identities = 16/44 (36%), Positives = 26/44 (59%)
 Frame = +3

Query: 18  FSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNG 149
           F   G +   +I+ D +TG S G+ FV F S+   ++AI+ +NG
Sbjct: 145 FRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVLNG 188

---

>SAP49_SCHPO (O14102) Spliceosome-associated protein 49|
          Length = 335

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 22/51 (43%), Positives = 31/51 (60%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 158
           L + FS  G ++ +  +   E GRS+G+GFV++ S E    AIEAMN Q L
Sbjct: 115 LYDTFSALGQLVKAPQVARDENGRSKGYGFVSYDSFETADAAIEAMNNQFL 165

---

>DAZP1_HUMAN (Q96EP5) DAZ-associated protein 1 (Deleted in|
           azoospermia-associated protein 1)
          Length = 407

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 20/57 (35%), Positives = 36/57 (63%), Gaps = 4/57 (7%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAI----EAMNGQDLD 161
           +L++ FS+YG+V+D  I+ D+ T +SRGFGFV F     +   +      ++G+++D
Sbjct: 25  TLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNID 81



 Score = 40.4 bits (93), Expect = 0.001
 Identities = 18/43 (41%), Positives = 28/43 (65%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAI 134
           L+  F K+G V +  +I D E  R RGFGF+TF  ++++ QA+
Sbjct: 129 LREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 171

---

>SQD_DROME (Q08473) RNA-binding protein squid (Heterogeneous nuclear|
           ribonucleoprotein 40) (HNRNP 40)
          Length = 344

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 18/39 (46%), Positives = 27/39 (69%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAM 122
           L++ F KYG++    + TD +TGRSRGF F+ F + EA+
Sbjct: 72  LRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAI 110



 Score = 31.2 bits (69), Expect = 0.76
 Identities = 9/44 (20%), Positives = 29/44 (65%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIE 137
           ++  F ++G++++ ++  D++  + +GF F+TF S++ +   ++
Sbjct: 152 IKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLK 195

---

>SFRS2_RAT (Q6PDU1) Splicing factor, arginine/serine-rich 2 (Splicing factor|
           SC35) (SC-35) (Splicing component, 35 kDa)
          Length = 220

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 24/53 (45%), Positives = 29/53 (54%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           +L+  F KYG V D  I  DR T  SRGF FV F        A++AM+G  LD
Sbjct: 28  TLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLD 80

---

>SFRS2_PANTR (Q5R1W5) Splicing factor, arginine/serine-rich 2 (Splicing factor|
           SC35) (SC-35) (Splicing component, 35 kDa)
          Length = 220

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 24/53 (45%), Positives = 29/53 (54%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           +L+  F KYG V D  I  DR T  SRGF FV F        A++AM+G  LD
Sbjct: 28  TLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLD 80

---

>SFRS2_MOUSE (Q62093) Splicing factor, arginine/serine-rich 2 (Splicing factor|
           SC35) (SC-35) (Splicing component, 35 kDa) (PR264
           protein) (Putative myelin regulatory factor 1) (MRF-1)
          Length = 220

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 24/53 (45%), Positives = 29/53 (54%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           +L+  F KYG V D  I  DR T  SRGF FV F        A++AM+G  LD
Sbjct: 28  TLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLD 80

---

>SFRS2_HUMAN (Q01130) Splicing factor, arginine/serine-rich 2 (Splicing factor|
           SC35) (SC-35) (Splicing component, 35 kDa) (PR264
           protein)
          Length = 220

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 24/53 (45%), Positives = 29/53 (54%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           +L+  F KYG V D  I  DR T  SRGF FV F        A++AM+G  LD
Sbjct: 28  TLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLD 80

---

>SFRS2_CHICK (P30352) Splicing factor, arginine/serine-rich 2 (Splicing factor|
           SC35) (SC-35) (Splicing component, 35 kDa) (PR264
           protein)
          Length = 221

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 24/53 (45%), Positives = 29/53 (54%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           +L+  F KYG V D  I  DR T  SRGF FV F        A++AM+G  LD
Sbjct: 29  TLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLD 81

---

>PPIE_DROME (Q9V3G3) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase|
           E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33)
          Length = 300

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 20/51 (39%), Positives = 29/51 (56%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 158
           L NAF  +GD+ D ++  D E+ R RGF F+ +   E    AI+ MN  +L
Sbjct: 22  LNNAFIPFGDIADIQMPADYESQRHRGFAFIEYEQSEDAAAAIDNMNDSEL 72

---

>DAZL_MACFA (Q95192) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted|
           in azoospermia-like 1)
          Length = 295

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 20/45 (44%), Positives = 35/45 (77%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEA 140
           +++ F++YG V + KIITDR TG S+G+GFV+F +D  +++ +E+
Sbjct: 56  IRSFFARYGSVKEVKIITDR-TGVSKGYGFVSFFNDVDVQKIVES 99

---

>DAZL_HUMAN (Q92904) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted|
           in azoospermia-like 1) (DAZ homolog)
           (SPGY-like-autosomal)
          Length = 295

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 20/45 (44%), Positives = 35/45 (77%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEA 140
           +++ F++YG V + KIITDR TG S+G+GFV+F +D  +++ +E+
Sbjct: 56  IRSFFARYGSVKEVKIITDR-TGVSKGYGFVSFFNDVDVQKIVES 99

---

>DAZL_MOUSE (Q64368) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted|
           in azoospermia-like 1)
          Length = 298

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 20/45 (44%), Positives = 35/45 (77%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEA 140
           +++ F++YG V + KIITDR TG S+G+GFV+F +D  +++ +E+
Sbjct: 56  IRSFFARYGSVKEVKIITDR-TGVSKGYGFVSFYNDVDVQKIVES 99

---

>ELAV1_HUMAN (Q15717) ELAV-like protein 1 (Hu-antigen R) (HuR)|
          Length = 326

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 17/48 (35%), Positives = 31/48 (64%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNG 149
           +++ FS++G +I+S+++ D+ TG SRG  F+ F       +AI + NG
Sbjct: 122 VEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNG 169



 Score = 41.6 bits (96), Expect = 6e-04
 Identities = 18/48 (37%), Positives = 30/48 (62%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNG 149
           L++ FS  G+V  +K+I D+  G S G+GFV + + +   +AI  +NG
Sbjct: 36  LRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTLNG 83



 Score = 40.4 bits (93), Expect = 0.001
 Identities = 20/51 (39%), Positives = 28/51 (54%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 158
           L   F  +G V + K+I D  T + +GFGFVT  + E    AI ++NG  L
Sbjct: 260 LWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRL 310

---

>HNRPQ_RAT (Q7TP47) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)|
           (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic
           RNA-interacting protein) (Liver regeneration-related
           protein LRRG077)
          Length = 533

 Score = 42.7 bits (99), Expect = 3e-04
 Identities = 18/52 (34%), Positives = 31/52 (59%)
 Frame = +3

Query: 18  FSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLDXXXH 173
           F K G + D +++ D  TG +RG+ FVTF + EA ++A++  N  ++    H
Sbjct: 92  FEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKH 143



 Score = 27.7 bits (60), Expect = 8.4
 Identities = 15/52 (28%), Positives = 28/52 (53%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           L+ +FS++G +   K + D        + F+ F   +   +A+E MNG+DL+
Sbjct: 264 LEKSFSQFGKLERVKKLKD--------YAFIHFDERDGAVKAMEEMNGKDLE 307

---

>HNRPQ_MOUSE (Q7TMK9) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)|
           (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic
           RNA-interacting protein) (Glycine-and tyrosine-rich
           RNA-binding protein) (GRY-RBP) (NS1-associated protein
           1) (pp68)
          Length = 623

 Score = 42.7 bits (99), Expect = 3e-04
 Identities = 18/52 (34%), Positives = 31/52 (59%)
 Frame = +3

Query: 18  FSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLDXXXH 173
           F K G + D +++ D  TG +RG+ FVTF + EA ++A++  N  ++    H
Sbjct: 182 FEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKH 233



 Score = 27.7 bits (60), Expect = 8.4
 Identities = 15/52 (28%), Positives = 28/52 (53%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           L+ +FS++G +   K + D        + F+ F   +   +A+E MNG+DL+
Sbjct: 354 LEKSFSQFGKLERVKKLKD--------YAFIHFDERDGAVKAMEEMNGKDLE 397

---

>HNRPQ_HUMAN (O60506) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)|
           (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic
           RNA-interacting protein) (Glycine-and tyrosine-rich
           RNA-binding protein) (GRY-RBP) (NS1-associated protein
           1)
          Length = 623

 Score = 42.7 bits (99), Expect = 3e-04
 Identities = 18/52 (34%), Positives = 31/52 (59%)
 Frame = +3

Query: 18  FSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLDXXXH 173
           F K G + D +++ D  TG +RG+ FVTF + EA ++A++  N  ++    H
Sbjct: 182 FEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKH 233



 Score = 28.9 bits (63), Expect = 3.8
 Identities = 16/52 (30%), Positives = 28/52 (53%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           L+ AFS++G +   K + D        + F+ F   +   +A+E MNG+DL+
Sbjct: 354 LEKAFSQFGKLERVKKLKD--------YAFIHFDERDGAVKAMEEMNGKDLE 397

---

>DAZL_CALJA (Q9BGN8) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted|
           in azoospermia-like 1)
          Length = 296

 Score = 42.7 bits (99), Expect = 3e-04
 Identities = 20/45 (44%), Positives = 34/45 (75%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEA 140
           ++  F++YG V + KIITDR TG S+G+GFV+F +D  +++ +E+
Sbjct: 56  IRGFFARYGSVKEVKIITDR-TGVSKGYGFVSFFNDVDVQKIVES 99

---

>SXL_CERCA (O61374) Sex-lethal homolog (CCSXL)|
          Length = 348

 Score = 42.7 bits (99), Expect = 3e-04
 Identities = 19/47 (40%), Positives = 27/47 (57%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMN 146
           L   F KYG ++   I+ D+ TG+ RG  FV F   E  ++AI A+N
Sbjct: 212 LDTIFGKYGMIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAISALN 258



 Score = 35.4 bits (80), Expect = 0.040
 Identities = 16/44 (36%), Positives = 28/44 (63%)
 Frame = +3

Query: 18  FSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNG 149
           F   G +   +I+ D +TG S G+ FV FA++   ++AI+++NG
Sbjct: 130 FRTIGPINTCRIMRDYKTGYSFGYAFVDFAAETDSQRAIKSLNG 173

---

>PABP_SCHPO (P31209) Polyadenylate-binding protein (Poly(A)-binding protein)|
           (PABP)
          Length = 653

 Score = 42.7 bits (99), Expect = 3e-04
 Identities = 20/47 (42%), Positives = 31/47 (65%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMN 146
           L+  FS +G +  +KI+TD E G+S+GFGFV + + E   +A+  MN
Sbjct: 380 LKAEFSAFGTITSAKIMTD-EQGKSKGFGFVCYTTPEEANKAVTEMN 425



 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 21/53 (39%), Positives = 33/53 (62%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           +L + FS +G ++  K+  D E G ++G+GFV F S E+   AIE +NG  L+
Sbjct: 183 ALHDTFSAFGKILSCKVAVD-ELGNAKGYGFVHFDSVESANAAIEHVNGMLLN 234



 Score = 36.2 bits (82), Expect = 0.024
 Identities = 13/46 (28%), Positives = 30/46 (65%)
 Frame = +3

Query: 18  FSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQD 155
           F ++G++    ++ D +  + RGFGFV +A+ E  ++A++ +N ++
Sbjct: 281 FGQFGEITSLSLVKD-QNDKPRGFGFVNYANHECAQKAVDELNDKE 325

---

>ROA1_HUMAN (P09651) Heterogeneous nuclear ribonucleoprotein A1|
           (Helix-destabilizing protein) (Single-strand RNA-binding
           protein) (hnRNP core protein A1)
          Length = 371

 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 20/46 (43%), Positives = 31/46 (67%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEA 140
           SL++ F ++G + D  ++ D  T RSRGFGFVT+A+ E +  A+ A
Sbjct: 28  SLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA 73



 Score = 39.7 bits (91), Expect = 0.002
 Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTF----ASDEAMRQAIEAMNGQDLD 161
           L++ F +YG +   +I+TDR +G+ RGF FVTF    + D+ + Q    +NG + +
Sbjct: 120 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 175

---

>ROA1_BOVIN (P09867) Heterogeneous nuclear ribonucleoprotein A1|
           (Helix-destabilizing protein) (Single-strand RNA-binding
           protein) (hnRNP core protein A1) (Unwinding protein 1)
           (UP1) (Fragment)
          Length = 195

 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 20/46 (43%), Positives = 31/46 (67%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEA 140
           SL++ F ++G + D  ++ D  T RSRGFGFVT+A+ E +  A+ A
Sbjct: 28  SLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA 73



 Score = 39.7 bits (91), Expect = 0.002
 Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTF----ASDEAMRQAIEAMNGQDLD 161
           L++ F +YG +   +I+TDR +G+ RGF FVTF    + D+ + Q    +NG + +
Sbjct: 120 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 175

---

>ROA1_RAT (P04256) Heterogeneous nuclear ribonucleoprotein A1|
           (Helix-destabilizing protein) (Single-strand RNA-binding
           protein) (hnRNP core protein A1) (HDP)
          Length = 319

 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 20/46 (43%), Positives = 31/46 (67%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEA 140
           SL++ F ++G + D  ++ D  T RSRGFGFVT+A+ E +  A+ A
Sbjct: 28  SLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA 73



 Score = 39.7 bits (91), Expect = 0.002
 Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTF----ASDEAMRQAIEAMNGQDLD 161
           L++ F +YG +   +I+TDR +G+ RGF FVTF    + D+ + Q    +NG + +
Sbjct: 120 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 175

---

>ROA1_MOUSE (P49312) Heterogeneous nuclear ribonucleoprotein A1|
           (Helix-destabilizing protein) (Single-strand binding
           protein) (hnRNP core protein A1) (HDP-1)
           (Topoisomerase-inhibitor suppressed)
          Length = 319

 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 20/46 (43%), Positives = 31/46 (67%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEA 140
           SL++ F ++G + D  ++ D  T RSRGFGFVT+A+ E +  A+ A
Sbjct: 28  SLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA 73



 Score = 39.7 bits (91), Expect = 0.002
 Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTF----ASDEAMRQAIEAMNGQDLD 161
           L++ F +YG +   +I+TDR +G+ RGF FVTF    + D+ + Q    +NG + +
Sbjct: 120 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 175

---

>ROA1_MACMU (Q28521) Heterogeneous nuclear ribonucleoprotein A1|
           (Helix-destabilizing protein) (Single-strand binding
           protein) (hnRNP core protein A1)
          Length = 319

 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 20/46 (43%), Positives = 31/46 (67%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEA 140
           SL++ F ++G + D  ++ D  T RSRGFGFVT+A+ E +  A+ A
Sbjct: 28  SLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEKVDAAMNA 73



 Score = 39.7 bits (91), Expect = 0.002
 Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTF----ASDEAMRQAIEAMNGQDLD 161
           L++ F +YG +   +I+TDR +G+ RGF FVTF    + D+ + Q    +NG + +
Sbjct: 120 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHNSVDKIVIQKYHTVNGHNCE 175

---

>DRBP1_HUMAN (Q8IUH3) Developmentally-regulated RNA-binding protein 1 (RB-1)|
          Length = 476

 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 20/51 (39%), Positives = 30/51 (58%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 158
           L+  FS +GD+ D  ++ D+ T  S+G  FV FA      +A+E M+GQ L
Sbjct: 41  LRERFSPFGDIQDIWVVRDKHTKESKGIAFVKFARSSQACRAMEEMHGQCL 91



 Score = 36.2 bits (82), Expect = 0.024
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIE 137
           L+  F  YGD+    II ++ TG S+G G+V +       QAIE
Sbjct: 136 LREKFKVYGDIEYCSIIKNKVTGESKGLGYVRYLKPSQAAQAIE 179

---

>DRBP1_RAT (Q8CFD1) Developmentally-regulated RNA-binding protein 1|
          Length = 476

 Score = 42.0 bits (97), Expect = 4e-04
 Identities = 20/51 (39%), Positives = 30/51 (58%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 158
           L+  FS +GD+ D  ++ D+ T  S+G  FV FA      +A+E M+GQ L
Sbjct: 41  LREHFSPFGDIQDIWVVRDKHTKESKGIAFVKFARSSQACRAMEEMHGQCL 91



 Score = 35.8 bits (81), Expect = 0.031
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIE 137
           L+  F  YGD+    +I ++ TG S+G G+V +       QAIE
Sbjct: 136 LREKFKVYGDIEYCSVIKNKVTGESKGLGYVRYLKPSQAAQAIE 179

---

>DRBP1_MOUSE (Q8BHN5) Developmentally-regulated RNA-binding protein 1 (RB-1)|
          Length = 476

 Score = 42.0 bits (97), Expect = 4e-04
 Identities = 20/51 (39%), Positives = 30/51 (58%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 158
           L+  FS +GD+ D  ++ D+ T  S+G  FV FA      +A+E M+GQ L
Sbjct: 41  LRERFSPFGDIQDIWVVRDKHTKESKGVAFVKFARSSQACRAMEEMHGQCL 91



 Score = 36.2 bits (82), Expect = 0.024
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIE 137
           L+  F  YGD+    II ++ TG S+G G+V +       QAIE
Sbjct: 136 LREKFKVYGDIEYCSIIKNKVTGESKGLGYVRYLKPSQAAQAIE 179

---

>RO21_XENLA (P51989) Heterogeneous nuclear ribonucleoprotein A2 homolog 1|
           (hnRNP A2(A))
          Length = 346

 Score = 42.0 bits (97), Expect = 4e-04
 Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFAS----DEAMRQAIEAMNGQDLD 161
           L+  F +YG +   +IITD+++G+ RGF FVTF      D+ + Q    +NG + +
Sbjct: 116 LREYFEEYGKIDSIEIITDKQSGKKRGFAFVTFDDHDPVDKIVLQKYHTINGHNAE 171



 Score = 38.1 bits (87), Expect = 0.006
 Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFAS----DEAMRQAIEAMNGQ 152
           SL+N + ++G + D  ++ D  + RSRGFGFVTF+     D AM      ++G+
Sbjct: 24  SLRNYYEQWGTLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMATRPHTIDGR 77

---

>RB97D_DROME (Q02926) Ribonucleoprotein RB97D|
          Length = 471

 Score = 42.0 bits (97), Expect = 4e-04
 Identities = 18/43 (41%), Positives = 30/43 (69%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAI 134
           L+  F ++G+V+  K++TD+ TG+ RGF FV F   +A+ +AI
Sbjct: 139 LREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAI 181



 Score = 36.2 bits (82), Expect = 0.024
 Identities = 16/45 (35%), Positives = 28/45 (62%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIE 137
           +L+  + ++G V+D  ++ D  T RSRGFGF+T+     + +A E
Sbjct: 47  NLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDRAQE 91

---

>ELAV1_MOUSE (P70372) ELAV-like protein 1 (Hu-antigen R) (HuR) (Elav-like|
           generic protein) (MelG)
          Length = 326

 Score = 41.6 bits (96), Expect = 6e-04
 Identities = 18/48 (37%), Positives = 30/48 (62%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNG 149
           L++ FS  G+V  +K+I D+  G S G+GFV + + +   +AI  +NG
Sbjct: 36  LRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAISTLNG 83



 Score = 40.4 bits (93), Expect = 0.001
 Identities = 20/51 (39%), Positives = 28/51 (54%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 158
           L   F  +G V + K+I D  T + +GFGFVT  + E    AI ++NG  L
Sbjct: 260 LWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEESAMAIASLNGYRL 310



 Score = 39.7 bits (91), Expect = 0.002
 Identities = 16/48 (33%), Positives = 30/48 (62%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNG 149
           +++ FS++G +I+S+++ D+ TG SRG  F+ F       +AI +  G
Sbjct: 122 VEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFIG 169

---

>MSI1H_RAT (Q8K3P4) RNA-binding protein Musashi homolog 1 (Musashi-1)|
          Length = 362

 Score = 41.6 bits (96), Expect = 6e-04
 Identities = 17/44 (38%), Positives = 30/44 (68%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIE 137
           +++ F ++G V D+ ++ D+ T R RGFGFVTF S++ + +  E
Sbjct: 125 VKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168



 Score = 38.5 bits (88), Expect = 0.005
 Identities = 21/52 (40%), Positives = 32/52 (61%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           L+  F ++G+V +  ++ D  T RSRGFGFVTF  D+A    + A +  +LD
Sbjct: 36  LREYFGQFGEVKECLVMRDPLTKRSRGFGFVTF-MDQAGVDKVLAQSRHELD 86

---

>MSI1H_MOUSE (Q61474) RNA-binding protein Musashi homolog 1 (Musashi-1)|
          Length = 362

 Score = 41.6 bits (96), Expect = 6e-04
 Identities = 17/44 (38%), Positives = 30/44 (68%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIE 137
           +++ F ++G V D+ ++ D+ T R RGFGFVTF S++ + +  E
Sbjct: 125 VKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168



 Score = 38.5 bits (88), Expect = 0.005
 Identities = 21/52 (40%), Positives = 32/52 (61%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           L+  F ++G+V +  ++ D  T RSRGFGFVTF  D+A    + A +  +LD
Sbjct: 36  LREYFGQFGEVKECLVMRDPLTKRSRGFGFVTF-MDQAGVDKVLAQSRHELD 86

---

>CUGB1_MOUSE (P28659) CUG triplet repeat RNA-binding protein 1 (CUG-BP1)|
           (RNA-binding protein BRUNOL-2) (Deadenylation factor
           CUG-BP) (Deadenylation factor EDEN-BP) (Brain protein
           F41)
          Length = 486

 Score = 41.6 bits (96), Expect = 6e-04
 Identities = 17/48 (35%), Positives = 32/48 (66%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNG 149
           L   F  +G+V+ +K+  D++T  S+ FGFV++ +  + + AI++MNG
Sbjct: 417 LLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNG 464



 Score = 32.7 bits (73), Expect = 0.26
 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETG--RSRGFGFVTFASDEAMRQAIEAMNGQDLDXXXHH 176
           L+  F +YG V +  I+ DR     +S+G  FVTF + +A  +A  A++   +    HH
Sbjct: 32  LRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNMKVLPGMHH 90



 Score = 30.4 bits (67), Expect = 1.3
 Identities = 16/43 (37%), Positives = 26/43 (60%)
 Frame = +3

Query: 18  FSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMN 146
           FS +G + + +I+   + G SRG  FVTF +    + AI+AM+
Sbjct: 128 FSSFGQIEECRILRGPD-GLSRGCAFVTFTTRTMAQTAIKAMH 169

---

>CUGB1_HUMAN (Q92879) CUG triplet repeat RNA-binding protein 1 (CUG-BP1)|
           (RNA-binding protein BRUNOL-2) (Deadenylation factor
           CUG-BP) (50 kDa Nuclear polyadenylated RNA-binding
           protein) (EDEN-BP)
          Length = 486

 Score = 41.6 bits (96), Expect = 6e-04
 Identities = 17/48 (35%), Positives = 32/48 (66%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNG 149
           L   F  +G+V+ +K+  D++T  S+ FGFV++ +  + + AI++MNG
Sbjct: 417 LLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNG 464



 Score = 32.3 bits (72), Expect = 0.34
 Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETG--RSRGFGFVTFASDEAMRQAIEAMNGQDLDXXXHH 176
           L+  F +YG V +  ++ DR     +S+G  FVTF + +A  +A  A++   +    HH
Sbjct: 32  LRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNMKVLPGMHH 90



 Score = 30.4 bits (67), Expect = 1.3
 Identities = 16/43 (37%), Positives = 26/43 (60%)
 Frame = +3

Query: 18  FSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMN 146
           FS +G + + +I+   + G SRG  FVTF +    + AI+AM+
Sbjct: 128 FSSFGQIEECRILRGPD-GLSRGCAFVTFTTRAMAQTAIKAMH 169

---

>SAFB1_HUMAN (Q15424) Scaffold attachment factor B (Scaffold attachment factor|
           B1) (SAF-B) (HSP27 estrogen response element-TATA
           box-binding protein) (HSP27 ERE-TATA-binding protein)
          Length = 915

 Score = 41.2 bits (95), Expect = 7e-04
 Identities = 18/51 (35%), Positives = 33/51 (64%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 158
           L+N FSKYG V+ +K++T+  +  +R +GFVT ++ E   + I  ++  +L
Sbjct: 422 LKNLFSKYGKVVGAKVVTNARSPGARCYGFVTMSTAEEATKCINHLHKTEL 472

---

>PABP5_PONPY (P60050) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 382

 Score = 41.2 bits (95), Expect = 7e-04
 Identities = 19/52 (36%), Positives = 34/52 (65%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           L+  F +YG     K+I D  +G+S+GFGFV + + EA ++A+  ++G+ +D
Sbjct: 215 LKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSID 265



 Score = 38.9 bits (89), Expect = 0.004
 Identities = 18/49 (36%), Positives = 31/49 (63%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQ 152
           L+  FS +G +  +K++   E G+ +GFG V F+S E   +A++ MNG+
Sbjct: 318 LKEEFSSFGSISRAKVMM--EVGQGKGFGVVCFSSFEEATKAVDEMNGR 364



 Score = 32.0 bits (71), Expect = 0.45
 Identities = 17/48 (35%), Positives = 28/48 (58%)
 Frame = +3

Query: 18  FSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           FS +G+++  K++ D     S+G+ +V F S  A  +AI  MNG  L+
Sbjct: 126 FSAFGNILSCKVVCD--DNGSKGYAYVHFDSLAAANRAIWHMNGVRLN 171

---

>PABP5_PANTR (P60049) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 382

 Score = 41.2 bits (95), Expect = 7e-04
 Identities = 19/52 (36%), Positives = 34/52 (65%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           L+  F +YG     K+I D  +G+S+GFGFV + + EA ++A+  ++G+ +D
Sbjct: 215 LKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSID 265



 Score = 38.9 bits (89), Expect = 0.004
 Identities = 18/49 (36%), Positives = 31/49 (63%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQ 152
           L+  FS +G +  +K++   E G+ +GFG V F+S E   +A++ MNG+
Sbjct: 318 LKEEFSSFGSISRAKVMM--EVGQGKGFGVVCFSSFEEATKAVDEMNGR 364



 Score = 32.0 bits (71), Expect = 0.45
 Identities = 17/48 (35%), Positives = 28/48 (58%)
 Frame = +3

Query: 18  FSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           FS +G+++  K++ D     S+G+ +V F S  A  +AI  MNG  L+
Sbjct: 126 FSAFGNILSCKVVCD--DNGSKGYAYVHFDSLAAANRAIWHMNGVRLN 171

---

>PABP5_MACMU (Q7JGR2) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 382

 Score = 41.2 bits (95), Expect = 7e-04
 Identities = 19/52 (36%), Positives = 34/52 (65%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           L+  F +YG     K+I D  +G+S+GFGFV + + EA ++A+  ++G+ +D
Sbjct: 215 LKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSID 265



 Score = 38.9 bits (89), Expect = 0.004
 Identities = 18/49 (36%), Positives = 31/49 (63%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQ 152
           L+  FS +G +  +K++   E G+ +GFG V F+S E   +A++ MNG+
Sbjct: 318 LKEEFSSFGSISRAKVMM--EVGQGKGFGVVCFSSFEEATKAVDEMNGR 364



 Score = 32.0 bits (71), Expect = 0.45
 Identities = 17/48 (35%), Positives = 28/48 (58%)
 Frame = +3

Query: 18  FSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           FS +G+++  K++ D     S+G+ +V F S  A  +AI  MNG  L+
Sbjct: 126 FSAFGNILSCKVVCD--DNGSKGYAYVHFDSLAAANRAIWHMNGVRLN 171

---

>PABP5_HYLLA (P60048) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 382

 Score = 41.2 bits (95), Expect = 7e-04
 Identities = 19/52 (36%), Positives = 34/52 (65%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           L+  F +YG     K+I D  +G+S+GFGFV + + EA ++A+  ++G+ +D
Sbjct: 215 LKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSID 265



 Score = 38.9 bits (89), Expect = 0.004
 Identities = 18/49 (36%), Positives = 31/49 (63%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQ 152
           L+  FS +G +  +K++   E G+ +GFG V F+S E   +A++ MNG+
Sbjct: 318 LKEEFSSFGSISRAKVMM--EVGQGKGFGVVCFSSFEEATKAVDEMNGR 364



 Score = 32.0 bits (71), Expect = 0.45
 Identities = 17/48 (35%), Positives = 28/48 (58%)
 Frame = +3

Query: 18  FSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           FS +G+++  K++ D     S+G+ +V F S  A  +AI  MNG  L+
Sbjct: 126 FSAFGNILSCKVVCD--DNGSKGYAYVHFDSLAAANRAIWHMNGVRLN 171

---

>PABP5_HUMAN (Q96DU9) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 382

 Score = 41.2 bits (95), Expect = 7e-04
 Identities = 19/52 (36%), Positives = 34/52 (65%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           L+  F +YG     K+I D  +G+S+GFGFV + + EA ++A+  ++G+ +D
Sbjct: 215 LKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSID 265



 Score = 38.9 bits (89), Expect = 0.004
 Identities = 18/49 (36%), Positives = 31/49 (63%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQ 152
           L+  FS +G +  +K++   E G+ +GFG V F+S E   +A++ MNG+
Sbjct: 318 LKEEFSSFGSISRAKVMM--EVGQGKGFGVVCFSSFEEATKAVDEMNGR 364



 Score = 32.0 bits (71), Expect = 0.45
 Identities = 17/48 (35%), Positives = 28/48 (58%)
 Frame = +3

Query: 18  FSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           FS +G+++  K++ D     S+G+ +V F S  A  +AI  MNG  L+
Sbjct: 126 FSAFGNILSCKVVCD--DNGSKGYAYVHFDSLAAANRAIWHMNGVRLN 171

---

>PABP5_GORGO (P60047) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 382

 Score = 41.2 bits (95), Expect = 7e-04
 Identities = 19/52 (36%), Positives = 34/52 (65%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           L+  F +YG     K+I D  +G+S+GFGFV + + EA ++A+  ++G+ +D
Sbjct: 215 LKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSID 265



 Score = 38.9 bits (89), Expect = 0.004
 Identities = 18/49 (36%), Positives = 31/49 (63%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQ 152
           L+  FS +G +  +K++   E G+ +GFG V F+S E   +A++ MNG+
Sbjct: 318 LKEEFSSFGSISRAKVMM--EVGQGKGFGVVCFSSFEEATKAVDEMNGR 364



 Score = 32.0 bits (71), Expect = 0.45
 Identities = 17/48 (35%), Positives = 28/48 (58%)
 Frame = +3

Query: 18  FSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           FS +G+++  K++ D     S+G+ +V F S  A  +AI  MNG  L+
Sbjct: 126 FSAFGNILSCKVVCD--DNGSKGYAYVHFDSLAAANRAIWHMNGVRLN 171

---

>MSI1H_HUMAN (O43347) RNA-binding protein Musashi homolog 1 (Musashi-1)|
          Length = 362

 Score = 41.2 bits (95), Expect = 7e-04
 Identities = 17/40 (42%), Positives = 27/40 (67%)
 Frame = +3

Query: 18  FSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIE 137
           F ++G V D+ ++ D+ T R RGFGFVTF S++ + +  E
Sbjct: 129 FEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168



 Score = 38.5 bits (88), Expect = 0.005
 Identities = 21/52 (40%), Positives = 32/52 (61%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           L+  F ++G+V +  ++ D  T RSRGFGFVTF  D+A    + A +  +LD
Sbjct: 36  LREYFGQFGEVKECLVMRDPLTKRSRGFGFVTF-MDQAGVDKVLAQSRHELD 86

---

>RBMX2_MOUSE (Q8R0F5) RNA-binding motif protein, X-linked 2|
          Length = 326

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 14/44 (31%), Positives = 30/44 (68%)
 Frame = +3

Query: 18  FSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNG 149
           FS+YG++++  ++ D++TG+S+GF F+ +    +   A++  NG
Sbjct: 56  FSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNFNG 99

---

>YG41_SCHPO (O60176) Hypothetical RNA-binding protein C23E6.01c in chromosome|
           II
          Length = 473

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 18/44 (40%), Positives = 26/44 (59%)
 Frame = +3

Query: 21  SKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQ 152
           S+Y     +KI+TD +T  SRG+GFV F  +   + A+  M GQ
Sbjct: 208 SRYNSCKSAKIMTDPQTNVSRGYGFVRFTDENDQKSALAEMQGQ 251

---

>RBMX2_HUMAN (Q9Y388) RNA-binding motif protein, X-linked 2|
          Length = 322

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 14/44 (31%), Positives = 30/44 (68%)
 Frame = +3

Query: 18  FSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNG 149
           FS+YG++++  ++ D++TG+S+GF F+ +    +   A++  NG
Sbjct: 56  FSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNG 99

---

>ROA3_HUMAN (P51991) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)|
          Length = 378

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTF----ASDEAMRQAIEAMNGQDLD 161
           +L++ F KYG +   +++ DR++G+ RGF FVTF      D+ + Q    +NG + +
Sbjct: 141 NLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCE 197



 Score = 40.8 bits (94), Expect = 0.001
 Identities = 19/44 (43%), Positives = 29/44 (65%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAI 134
           SL+  F K+G + D  ++ D +T RSRGFGFVT++  E +  A+
Sbjct: 50  SLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAM 93

---

>PPIE_MOUSE (Q9QZH3) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase|
           E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33)
          Length = 301

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 22/51 (43%), Positives = 28/51 (54%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 158
           L  AF  +GD+ D +I  D ET + RGF FV F   E    AI+ MN  +L
Sbjct: 22  LHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESEL 72

---

>PPIE_HUMAN (Q9UNP9) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase|
           E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33)
          Length = 301

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 22/51 (43%), Positives = 28/51 (54%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 158
           L  AF  +GD+ D +I  D ET + RGF FV F   E    AI+ MN  +L
Sbjct: 22  LHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESEL 72

---

>ROA3_RAT (Q6URK4) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)|
          Length = 379

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTF----ASDEAMRQAIEAMNGQDLD 161
           +L++ F KYG +   +++ DR++G+ RGF FVTF      D+ + Q    +NG + +
Sbjct: 141 NLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCE 197



 Score = 40.8 bits (94), Expect = 0.001
 Identities = 19/44 (43%), Positives = 29/44 (65%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAI 134
           SL+  F K+G + D  ++ D +T RSRGFGFVT++  E +  A+
Sbjct: 50  SLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAM 93

---

>ROA3_MOUSE (Q8BG05) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)|
          Length = 379

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTF----ASDEAMRQAIEAMNGQDLD 161
           +L++ F KYG +   +++ DR++G+ RGF FVTF      D+ + Q    +NG + +
Sbjct: 141 NLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCE 197



 Score = 40.8 bits (94), Expect = 0.001
 Identities = 19/44 (43%), Positives = 29/44 (65%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAI 134
           SL+  F K+G + D  ++ D +T RSRGFGFVT++  E +  A+
Sbjct: 50  SLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAM 93

---

>SAFB2_HUMAN (Q14151) Scaffold attachment factor B2|
          Length = 953

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 17/51 (33%), Positives = 33/51 (64%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 158
           L+N FSKYG V+ +K++T+  +  +R +GFVT ++ +   + I  ++  +L
Sbjct: 423 LKNLFSKYGKVVGAKVVTNARSPGARCYGFVTMSTSDEATKCISHLHRTEL 473

---

>ROA1_SCHAM (P21522) Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog|
          Length = 342

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 15/35 (42%), Positives = 27/35 (77%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFA 107
           SL+  F ++G+++D  ++ D +T RSRGFGF+T++
Sbjct: 32  SLKQHFEQWGEIVDVVVMKDPKTKRSRGFGFITYS 66



 Score = 38.1 bits (87), Expect = 0.006
 Identities = 15/33 (45%), Positives = 23/33 (69%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTF 104
           L++ F +YG V+ + I+ D+ET + RGF FV F
Sbjct: 124 LRDYFKQYGTVVSAAIVVDKETRKKRGFAFVEF 156

---

>MK67I_BRARE (Q8JIY8) MKI67 FHA domain-interacting nucleolar phosphoprotein-like|
           (Nucleolar phosphoprotein NOPP34-like protein)
          Length = 269

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 17/47 (36%), Positives = 29/47 (61%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMN 146
           L++ F ++G V+  ++   ++TG S+G+GFV F  DE  +   E MN
Sbjct: 61  LKSYFEQFGKVLRLRVSRSKKTGGSKGYGFVEFECDEVAKIVAETMN 107

---

>RBY1A_HUMAN (Q15414) RNA-binding motif protein, Y chromosome, family 1 member|
           A1 (RNA-binding motif protein 1)
          Length = 496

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 20/51 (39%), Positives = 31/51 (60%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 158
           L+  F K+G + +  +I DR T +SRGF F+TF +    + A + MNG+ L
Sbjct: 24  LKAVFGKHGPISEVLLIKDR-TSKSRGFAFITFENPADAKNAAKDMNGKSL 73

---

>SAFB1_RAT (O88453) Scaffold attachment factor B (Scaffold attachment factor|
           B1) (SAF-B)
          Length = 931

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 17/51 (33%), Positives = 33/51 (64%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 158
           L+N FS+YG V+ +K++T+  +  +R +GFVT ++ E   + I  ++  +L
Sbjct: 444 LKNLFSRYGKVVGAKVVTNARSPGARCYGFVTMSTAEEATKCINHLHKTEL 494

---

>DAZL_CHICK (Q804A9) Deleted in azoospermia-like (DAZ-like protein)|
          Length = 289

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 19/45 (42%), Positives = 33/45 (73%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEA 140
           +++ F +YG V + KIITDR TG S+G+GFV+F  +  +++ +E+
Sbjct: 52  IRSYFEQYGTVKEVKIITDR-TGVSKGYGFVSFLDNVDVQKIVES 95

---

>ROA0_HUMAN (Q13151) Heterogeneous nuclear ribonucleoprotein A0 (hnRNP A0)|
          Length = 305

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 17/38 (44%), Positives = 28/38 (73%)
 Frame = +3

Query: 18  FSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQA 131
           FS++G V  ++II D+++G+ RGFGFV F + +A  +A
Sbjct: 118 FSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKA 155



 Score = 35.8 bits (81), Expect = 0.031
 Identities = 18/56 (32%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFA----SDEAMRQAIEAMNGQDLD 161
           L+  F  +G + D  ++ + +T RSR FGFVT++    +D AM  +  A++G  ++
Sbjct: 23  LRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEADAAMAASPHAVDGNTVE 78

---

>RNA15_YEAST (P25299) mRNA 3'-end-processing protein RNA15|
          Length = 296

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 18/46 (39%), Positives = 28/46 (60%)
 Frame = +3

Query: 21  SKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 158
           S  G VI+ K++ D +TGRS+G+ F+ F   E+   A+  +NG  L
Sbjct: 39  SNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASAVRNLNGYQL 84

---

>IF34_YEAST (Q04067) Eukaryotic translation initiation factor 3 RNA-binding|
           subunit (eIF-3 RNA-binding subunit) (eIF3 p33)
           (Translation initiation factor eIF3, p33 subunit)
          Length = 274

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 15/34 (44%), Positives = 26/34 (76%)
 Frame = +3

Query: 51  IITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQ 152
           ++ ++ETG+SRG  FVTF+S+E   QA+  ++G+
Sbjct: 223 VVRNKETGKSRGLAFVTFSSEEVAEQALRFLDGR 256

---

>BOLL_MACFA (Q8WP23) Protein boule-like|
          Length = 283

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDE---AMRQAIEAMNGQD 155
           L+  FS+YG V + KI+ DR  G S+G+GFVTF + E    + Q  E +N +D
Sbjct: 49  LRKFFSQYGSVKEVKIVNDR-AGVSKGYGFVTFETQEDAQKILQEAEKLNYKD 100

---

>BOLL_HUMAN (Q8N9W6) Protein boule-like|
          Length = 283

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDE---AMRQAIEAMNGQD 155
           L+  FS+YG V + KI+ DR  G S+G+GFVTF + E    + Q  E +N +D
Sbjct: 49  LRKFFSQYGSVKEVKIVNDR-AGVSKGYGFVTFETQEDAQKILQEAEKLNYKD 100

---

>BOLL_MOUSE (Q924M5) Protein boule-like|
          Length = 281

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDE---AMRQAIEAMNGQD 155
           L+  FS+YG V + KI+ DR  G S+G+GF+TF + E    + Q  E +N +D
Sbjct: 49  LRKFFSQYGSVKEVKIVNDR-AGVSKGYGFITFETQEDAQKILQEAEKLNYKD 100

---

>RO31_XENLA (P51968) Heterogeneous nuclear ribonucleoprotein A3 homolog 1|
           (hnRNP A3(A))
          Length = 373

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 18/46 (39%), Positives = 30/46 (65%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEA 140
           SL+  F ++G + D  ++ D +T RSRGFGFVT++  E +  ++ A
Sbjct: 42  SLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDASMSA 87



 Score = 35.4 bits (80), Expect = 0.040
 Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTF----ASDEAMRQAIEAMNGQDLD 161
           L++    YG +   +++ DR++G+ RGF FVTF      D+ + Q    +NG + +
Sbjct: 134 LRDYSESYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCE 189

---

>RO32_XENLA (P51992) Heterogeneous nuclear ribonucleoprotein A3 homolog 2|
           (hnRNP A3(B))
          Length = 385

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 18/46 (39%), Positives = 30/46 (65%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEA 140
           SL+  F ++G + D  ++ D +T RSRGFGFVT++  E +  ++ A
Sbjct: 42  SLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDASMSA 87



 Score = 36.2 bits (82), Expect = 0.024
 Identities = 14/43 (32%), Positives = 27/43 (62%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAI 134
           L++ F  YG +   +++ DR++G+ RGF FVTF   + + + +
Sbjct: 134 LRDYFEGYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIV 176

---

>RB87F_DROME (P48810) Heterogeneous nuclear ribonucleoprotein 87F (HRP36.1|
           protein) (Protein P11)
          Length = 385

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 17/45 (37%), Positives = 29/45 (64%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEA 140
           L+  F K+G+++D  ++ D +T RSRGFGF+T++    +  A  A
Sbjct: 40  LKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQNA 84



 Score = 37.7 bits (86), Expect = 0.008
 Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFAS----DEAMRQAIEAMNGQDLD 161
           L+  F  +G ++   I++D++TG+ RGF F+ F      D+ + Q   ++  + LD
Sbjct: 131 LREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLD 186

---

>YG5B_YEAST (P53316) Hypothetical 89.5 kDa protein in MGA1-GCN4 intergenic|
           region
          Length = 781

 Score = 39.3 bits (90), Expect = 0.003
 Identities = 15/48 (31%), Positives = 28/48 (58%)
 Frame = +3

Query: 18  FSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           FSKYG ++  K+I D+  G   G+GF+++         I+ +NG+ ++
Sbjct: 215 FSKYGPILSMKLIYDKTKGEPNGYGFISYPLGSQASLCIKELNGRTVN 262



 Score = 28.5 bits (62), Expect = 4.9
 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 19/67 (28%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIIT-------------------DRETGRSRGFGFVTFASDEAMRQ 128
           L + +  +G++I  K+IT                   D   G SRG+GFV+F S     +
Sbjct: 556 LYDFYKSFGEIISVKVITVGGSKNKYRQQSNDSSSDNDLPVGSSRGYGFVSFESPLDAAK 615

Query: 129 AIEAMNG 149
           AI   +G
Sbjct: 616 AILNTDG 622

---

>DAZ2_HUMAN (Q13117) Deleted in azoospermia protein 2|
          Length = 558

 Score = 38.9 bits (89), Expect = 0.004
 Identities = 18/41 (43%), Positives = 30/41 (73%)
 Frame = +3

Query: 12  NAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAI 134
           + F +YG V + KIIT+R TG S+G+GFV+F +D  +++ +
Sbjct: 58  SCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIV 97

---

>RBMS2_HUMAN (Q15434) RNA-binding motif, single-stranded-interacting protein 2|
           (Suppressor of CDC2 with RNA-binding motif 3)
          Length = 407

 Score = 38.9 bits (89), Expect = 0.004
 Identities = 15/39 (38%), Positives = 26/39 (66%)
 Frame = +3

Query: 27  YGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAM 143
           YG ++ +K I D+ T + +G+GFV F S  A ++A+ A+
Sbjct: 79  YGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTAL 117



 Score = 31.6 bits (70), Expect = 0.58
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQ 152
           L+     +G VI ++I+ D  +G SRG GF    S E     I   NG+
Sbjct: 151 LEGMLKPFGQVISTRILRDT-SGTSRGVGFARMESTEKCEAIITHFNGK 198

---

>RBM8A_MOUSE (Q9CWZ3) RNA-binding protein 8A (RNA-binding motif protein 8A)|
           (Ribonucleoprotein RBM8A)
          Length = 174

 Score = 38.9 bits (89), Expect = 0.004
 Identities = 16/51 (31%), Positives = 32/51 (62%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 158
           + + F++YG++ +  +  DR TG  +G+  V + + +  + A+E +NGQDL
Sbjct: 89  IHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDL 139

---

>RBM8A_HUMAN (Q9Y5S9) RNA-binding protein 8A (RNA-binding motif protein 8A)|
           (Ribonucleoprotein RBM8A) (RNA-binding protein Y14)
           (Binder of OVCA1-1) (BOV-1)
          Length = 174

 Score = 38.9 bits (89), Expect = 0.004
 Identities = 16/51 (31%), Positives = 32/51 (62%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 158
           + + F++YG++ +  +  DR TG  +G+  V + + +  + A+E +NGQDL
Sbjct: 89  IHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDL 139

---

>RSP4_CAEEL (Q09511) Probable splicing factor, arginine/serine-rich 4|
           (RNA-binding protein srp-2) (CeSC35)
          Length = 196

 Score = 38.9 bits (89), Expect = 0.004
 Identities = 18/52 (34%), Positives = 30/52 (57%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           L+  F +YGD+ D  I  D+ + +S+GFGFV F        A++  +G+ +D
Sbjct: 35  LRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDGKLVD 86

---

>RBMS1_MOUSE (Q91W59) RNA-binding motif, single-stranded-interacting protein 1|
           (Single-stranded DNA-binding protein MSSP-1)
          Length = 403

 Score = 38.9 bits (89), Expect = 0.004
 Identities = 15/39 (38%), Positives = 26/39 (66%)
 Frame = +3

Query: 27  YGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAM 143
           YG ++ +K I D+ T + +G+GFV F S  A ++A+ A+
Sbjct: 85  YGKIVSTKAILDKATNKCKGYGFVDFDSPAAAQKAVSAL 123



 Score = 33.9 bits (76), Expect = 0.12
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQ 152
           L+N    +G VI ++++ D  +G SRG GF    S E     I   NG+
Sbjct: 157 LENMLKPFGQVISTRVLRD-SSGASRGVGFARMESTEKCEAVIGHFNGK 204

---

>ROA1_XENLA (P17130) Heterogeneous nuclear ribonucleoproteins A1 homolog (hnRNP|
           A1) (Helix-destabilizing protein) (Single-strand binding
           protein) (hnRNP core protein A1)
          Length = 365

 Score = 38.9 bits (89), Expect = 0.004
 Identities = 18/46 (39%), Positives = 29/46 (63%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEA 140
           SL+  F ++G + D  ++ D  + RSRGFGFVT+ S + +  A+ A
Sbjct: 29  SLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTDEVDAAMTA 74



 Score = 38.1 bits (87), Expect = 0.006
 Identities = 16/43 (37%), Positives = 28/43 (65%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAI 134
           L+  F +YG +   +I+TDR +G+ RGF FVTF   +++ + +
Sbjct: 121 LREYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKIV 163

---

>DAZ4_HUMAN (Q86SG3) Deleted in azoospermia protein 4|
          Length = 579

 Score = 38.9 bits (89), Expect = 0.004
 Identities = 18/41 (43%), Positives = 30/41 (73%)
 Frame = +3

Query: 12  NAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAI 134
           + F +YG V + KIIT+R TG S+G+GFV+F +D  +++ +
Sbjct: 223 SCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIV 262



 Score = 38.9 bits (89), Expect = 0.004
 Identities = 18/41 (43%), Positives = 30/41 (73%)
 Frame = +3

Query: 12  NAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAI 134
           + F +YG V + KIIT+R TG S+G+GFV+F +D  +++ +
Sbjct: 58  SCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIV 97

---

>PPIL4_SCHPO (Q9UUE4) Peptidyl-prolyl cis-trans isomerase cyp6 (EC 5.2.1.8)|
           (PPIase cyp6) (Rotamase cyp8)
          Length = 432

 Score = 38.9 bits (89), Expect = 0.004
 Identities = 18/57 (31%), Positives = 32/57 (56%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLDXXXHH 176
           L+  FS++G +I  ++I D+ETG S  + F+ F + E++ +A   M    +D    H
Sbjct: 260 LELIFSRFGKIISCQVIRDKETGDSLQYAFIEFDNKESVEKAYFKMQNVLIDDSRIH 316

---

>DAZ1_HUMAN (Q9NQZ3) Deleted in azoospermia protein 1|
          Length = 744

 Score = 38.9 bits (89), Expect = 0.004
 Identities = 18/41 (43%), Positives = 30/41 (73%)
 Frame = +3

Query: 12  NAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAI 134
           + F +YG V + KIIT+R TG S+G+GFV+F +D  +++ +
Sbjct: 388 SCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIV 427



 Score = 38.9 bits (89), Expect = 0.004
 Identities = 18/41 (43%), Positives = 30/41 (73%)
 Frame = +3

Query: 12  NAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAI 134
           + F +YG V + KIIT+R TG S+G+GFV+F +D  +++ +
Sbjct: 223 SCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIV 262



 Score = 38.9 bits (89), Expect = 0.004
 Identities = 18/41 (43%), Positives = 30/41 (73%)
 Frame = +3

Query: 12  NAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAI 134
           + F +YG V + KIIT+R TG S+G+GFV+F +D  +++ +
Sbjct: 58  SCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIV 97

---

>DAZ3_HUMAN (Q9NR90) Deleted in azoospermia protein 3|
          Length = 486

 Score = 38.9 bits (89), Expect = 0.004
 Identities = 18/41 (43%), Positives = 30/41 (73%)
 Frame = +3

Query: 12  NAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAI 134
           + F +YG V + KIIT+R TG S+G+GFV+F +D  +++ +
Sbjct: 58  SCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIV 97

---

>RBMS1_HUMAN (P29558) RNA-binding motif, single-stranded-interacting protein 1|
           (Single-stranded DNA-binding protein MSSP-1) (Suppressor
           of CDC2 with RNA-binding motif 2)
          Length = 406

 Score = 38.9 bits (89), Expect = 0.004
 Identities = 15/39 (38%), Positives = 26/39 (66%)
 Frame = +3

Query: 27  YGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAM 143
           YG ++ +K I D+ T + +G+GFV F S  A ++A+ A+
Sbjct: 85  YGKIVSTKAILDKTTNKCKGYGFVDFDSPAAAQKAVSAL 123



 Score = 34.3 bits (77), Expect = 0.090
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQ 152
           L+N    +G VI ++I+ D  +G SRG GF    S E     I   NG+
Sbjct: 157 LENMLKPFGQVISTRILRD-SSGTSRGVGFARMESTEKCEAVIGHFNGK 204

---

>HNRPR_HUMAN (O43390) Heterogeneous nuclear ribonucleoprotein R (hnRNP R)|
          Length = 633

 Score = 38.5 bits (88), Expect = 0.005
 Identities = 15/52 (28%), Positives = 31/52 (59%)
 Frame = +3

Query: 18  FSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLDXXXH 173
           F K G + D +++ D  +G++RG+ F+TF   EA ++A++  +  ++    H
Sbjct: 185 FEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQEAVKLCDSYEIRPGKH 236

---

>HNRPM_MOUSE (Q9D0E1) Heterogeneous nuclear ribonucleoprotein M (hnRNP M)|
          Length = 728

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 21/49 (42%), Positives = 28/49 (57%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQ 152
           L+  FS  G V+ + I+ D++ G+SRG G VTF       QAI   NGQ
Sbjct: 218 LKEVFSMAGVVVRADILEDKD-GKSRGIGIVTFEQSIEAVQAISMFNGQ 265



 Score = 33.1 bits (74), Expect = 0.20
 Identities = 19/51 (37%), Positives = 28/51 (54%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 158
           L++ F++ G V+ + I    E G+S+G G V F S E   +A   MNG  L
Sbjct: 667 LKDKFNECGHVLYADI--KMENGKSKGCGVVKFESPEVAERACRMMNGMKL 715

---

>BOULE_DROME (Q24207) Protein boule|
          Length = 228

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 19/37 (51%), Positives = 25/37 (67%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDE 116
           L   FS YG V  +KII DR  G S+G+GFVTF +++
Sbjct: 49  LTRVFSAYGTVKSTKIIVDR-AGVSKGYGFVTFETEQ 84

---

>PABPX_SCHPO (Q9P6M8) mRNA export factor crp79 (Polyadenylate-binding protein|
           crp79) (Poly(A)-binding protein) (PABP) (Meiotic
           expression up-regulated protein 5)
          Length = 710

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 17/48 (35%), Positives = 29/48 (60%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNG 149
           L++ FS +G ++ S +     +G S+G+GFV F   EA  +A + +NG
Sbjct: 400 LEDLFSPFGSILSSMLACYPNSGISKGYGFVAFRQIEAAVRAKDTLNG 447

---

>NAM8_YEAST (Q00539) Protein NAM8|
          Length = 523

 Score = 37.7 bits (86), Expect = 0.008
 Identities = 15/43 (34%), Positives = 26/43 (60%)
 Frame = +3

Query: 21  SKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNG 149
           ++Y     +KI+ D+ TG S+G+GFV F + +  + A+  M G
Sbjct: 185 NRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQG 227

---

>RBMS2_MOUSE (Q8VC70) RNA-binding motif, single-stranded-interacting protein 2|
          Length = 383

 Score = 37.7 bits (86), Expect = 0.008
 Identities = 14/39 (35%), Positives = 26/39 (66%)
 Frame = +3

Query: 27  YGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAM 143
           YG ++ +K I D+ T + +G+GFV F S  + ++A+ A+
Sbjct: 81  YGKIVSTKAILDKTTNKCKGYGFVDFDSPSSAQKAVTAL 119



 Score = 31.6 bits (70), Expect = 0.58
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQ 152
           L+     +G VI ++I+ D  +G SRG GF    S E     I   NG+
Sbjct: 153 LEGMLKPFGQVISTRILRDT-SGASRGVGFARMESTEKCEAIITHFNGK 200

---

>CTF1_SCHPO (O43040) Cleavage and termination factor 1 (Transcription|
           termination factor ctf1)
          Length = 363

 Score = 37.7 bits (86), Expect = 0.008
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = +3

Query: 18  FSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 158
           F++ G V   K++ D ETG  +G+GF  F   E    A+  +N  +L
Sbjct: 27  FNQVGPVKTFKLVLDPETGSGKGYGFCEFFDSETTAMAVRKLNNSEL 73

---

>MRD1_CANAL (Q5AJS6) Multiple RNA-binding domain-containing protein 1|
          Length = 841

 Score = 37.7 bits (86), Expect = 0.008
 Identities = 20/52 (38%), Positives = 30/52 (57%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           L+  FSK GDV D K++  R  G SR F F+ + S +A  +A++  N   +D
Sbjct: 18  LREFFSKQGDVTDVKLMKKR-NGESRKFAFIGYKSADAAERAVKYFNKSFID 68



 Score = 33.9 bits (76), Expect = 0.12
 Identities = 16/48 (33%), Positives = 28/48 (58%)
 Frame = +3

Query: 9   QNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQ 152
           ++ FS+YG + +  I  D  TG+S+GF +V F   E   +A  +++ Q
Sbjct: 327 RSLFSQYGALEEVHIAIDTRTGKSKGFLYVQFLKKEDATRAYRSLDKQ 374

---

>IF34_CAEEL (Q19706) Probable eukaryotic translation initiation factor 3|
           subunit 4 (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding
           subunit) (eIF3g)
          Length = 256

 Score = 37.4 bits (85), Expect = 0.011
 Identities = 20/47 (42%), Positives = 27/47 (57%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMN 146
           L++ F K G VI   I  D+ TG  +GF FVTF S +   +AI  +N
Sbjct: 192 LRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELN 238

---

>SAFB2_MOUSE (Q80YR5) Scaffold attachment factor B2|
          Length = 991

 Score = 37.4 bits (85), Expect = 0.011
 Identities = 16/51 (31%), Positives = 33/51 (64%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 158
           L++ FSK+G VI +K++T+  +  +R +GFVT ++ +   + I  ++  +L
Sbjct: 467 LKSLFSKHGKVIGAKVVTNARSPGARCYGFVTMSTSDEATKCISHLHRTEL 517

---

>HNRPM_RAT (Q62826) Heterogeneous nuclear ribonucleoprotein M (hnRNP M) (M4|
           protein)
          Length = 689

 Score = 37.4 bits (85), Expect = 0.011
 Identities = 21/49 (42%), Positives = 28/49 (57%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQ 152
           L+  FS  G V+ + I+ D++ G+SRG G VTF       QAI   NGQ
Sbjct: 179 LKEVFSMAGVVVRADILEDKD-GKSRGIGTVTFEQSIEAVQAISMFNGQ 226



 Score = 33.1 bits (74), Expect = 0.20
 Identities = 19/51 (37%), Positives = 28/51 (54%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 158
           L++ F++ G V+ + I    E G+S+G G V F S E   +A   MNG  L
Sbjct: 628 LKDKFNECGHVLYADI--KMENGKSKGCGVVKFESPEVAERACRMMNGMKL 676

---

>HNRPM_HUMAN (P52272) Heterogeneous nuclear ribonucleoprotein M (hnRNP M)|
          Length = 729

 Score = 37.4 bits (85), Expect = 0.011
 Identities = 21/49 (42%), Positives = 28/49 (57%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQ 152
           L+  FS  G V+ + I+ D++ G+SRG G VTF       QAI   NGQ
Sbjct: 219 LKEVFSMAGVVVRADILEDKD-GKSRGIGTVTFEQSIEAVQAISMFNGQ 266



 Score = 33.1 bits (74), Expect = 0.20
 Identities = 19/51 (37%), Positives = 28/51 (54%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 158
           L++ F++ G V+ + I    E G+S+G G V F S E   +A   MNG  L
Sbjct: 668 LKDKFNECGHVLYADI--KMENGKSKGCGVVKFESPEVAERACRMMNGMKL 716

---

>SFPQ_MOUSE (Q8VIJ6) Splicing factor, proline- and glutamine-rich|
           (Polypyrimidine tract-binding protein-associated
           splicing factor) (PTB-associated splicing factor) (PSF)
           (DNA-binding p52/p100 complex, 100 kDa subunit)
          Length = 699

 Score = 37.0 bits (84), Expect = 0.014
 Identities = 20/44 (45%), Positives = 28/44 (63%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIE 137
           L+ AFS++G +  + +I D + GRS G G V FAS  A R+A E
Sbjct: 379 LEEAFSQFGPIERAVVIVD-DRGRSTGKGIVEFASKPAARKAFE 421

---

>YNL0_YEAST (P53927) Hypothetical 25.4 kDa protein in CYB5-LEU4 intergenic|
           region
          Length = 220

 Score = 37.0 bits (84), Expect = 0.014
 Identities = 16/47 (34%), Positives = 30/47 (63%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMN 146
           L   F+++GD+ + ++  +++TG SR +GF+ F + E    A E+MN
Sbjct: 107 LSKYFAQFGDLKEVRLARNKKTGNSRHYGFLEFVNKEDAMIAQESMN 153

---

>SFPQ_HUMAN (P23246) Splicing factor, proline- and glutamine-rich|
           (Polypyrimidine tract-binding protein-associated
           splicing factor) (PTB-associated splicing factor) (PSF)
           (DNA-binding p52/p100 complex, 100 kDa subunit) (100-kDa
           DNA-pairing protein) (hPOMp
          Length = 707

 Score = 37.0 bits (84), Expect = 0.014
 Identities = 20/44 (45%), Positives = 28/44 (63%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIE 137
           L+ AFS++G +  + +I D + GRS G G V FAS  A R+A E
Sbjct: 387 LEEAFSQFGPIERAVVIVD-DRGRSTGKGIVEFASKPAARKAFE 429

---

>IF39_YEAST (P06103) Eukaryotic translation initiation factor 3 90 kDa subunit|
           (eIF3 p90) (Cell cycle regulation and translation
           initiation protein)
          Length = 763

 Score = 37.0 bits (84), Expect = 0.014
 Identities = 18/53 (33%), Positives = 32/53 (60%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           +L + FSK G V++ +   D  TG+++GF FV   S    ++ I++ +G+ LD
Sbjct: 98  ALTSLFSKAGKVVNMEFPIDEATGKTKGFLFVECGSMNDAKKIIKSFHGKRLD 150

---

>TCG1_SCHPO (Q9HEQ9) Single-stranded TG1-3 DNA-binding protein|
          Length = 348

 Score = 37.0 bits (84), Expect = 0.014
 Identities = 17/31 (54%), Positives = 22/31 (70%)
 Frame = +3

Query: 66  ETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 158
           E  R RGFGFV+FA+ E   +AIE MNG+ +
Sbjct: 253 EQRRGRGFGFVSFANAEDQSRAIEEMNGKQV 283



 Score = 30.0 bits (66), Expect = 1.7
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = +3

Query: 84  GFGFVTFASDEAMRQAIEAMNGQDLD 161
           G  FVTF + E + +AIE +NG+ LD
Sbjct: 90  GIAFVTFNNQEDVDKAIETLNGKTLD 115

---

>RSD1_SCHPO (O13845) RNA-binding protein rsd1|
          Length = 604

 Score = 37.0 bits (84), Expect = 0.014
 Identities = 18/51 (35%), Positives = 35/51 (68%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 158
           L + F + G V D++I+ D+ +GRS+G  +V F  +++++ AI A++G+ L
Sbjct: 256 LYDFFEQAGPVRDAQIVRDKISGRSKGVAYVEFCHEDSVQAAI-ALSGKRL 305



 Score = 35.0 bits (79), Expect = 0.053
 Identities = 17/47 (36%), Positives = 28/47 (59%)
 Frame = +3

Query: 18  FSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 158
           F  +GD+    +  D +  RS+GFG++ + +  + R A+E MNG DL
Sbjct: 360 FEPFGDIEFVHLQRD-DQNRSKGFGYIQYRNPISARNALEKMNGFDL 405

---

>TRA2_DROME (P19018) Transformer-2 sex-determining protein|
          Length = 264

 Score = 36.6 bits (83), Expect = 0.018
 Identities = 17/52 (32%), Positives = 31/52 (59%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           ++  F+KYG +   +++ D +T RSRGF F+ F      R A ++ +G ++D
Sbjct: 113 VRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSCSGIEVD 164

---

>RBM8A_DROME (Q9V535) RNA-binding protein 8A (Protein tsunagi)|
          Length = 165

 Score = 36.6 bits (83), Expect = 0.018
 Identities = 16/51 (31%), Positives = 29/51 (56%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 158
           +Q  F  YG++ +  +  DR TG S+G+  V + + +    A EA+NG ++
Sbjct: 89  IQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEI 139

---

>ELAV_DROVI (P23241) Protein elav (Embryonic lethal abnormal visual protein)|
          Length = 519

 Score = 36.6 bits (83), Expect = 0.018
 Identities = 17/49 (34%), Positives = 27/49 (55%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNG 149
           +L   F  +G V   KI+ D  T + +G+GFV+  + +    AI A+NG
Sbjct: 453 ALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRALNG 501



 Score = 32.0 bits (71), Expect = 0.45
 Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 13/61 (21%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRET-------------GRSRGFGFVTFASDEAMRQAIEAMN 146
           +++ FS  G++   K+I D+               G+S G+GFV +   +   QA+  +N
Sbjct: 201 IRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLN 260

Query: 147 G 149
           G
Sbjct: 261 G 261



 Score = 31.2 bits (69), Expect = 0.76
 Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETG-RSRGFGFVTFASDEAMRQAIEAMNG 149
           L+  F+ +G +I S+I+ +     +++G GF+ F   E   +AI A+NG
Sbjct: 300 LEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALNG 348

---

>ELAV_DROME (P16914) Protein elav (Embryonic lethal abnormal visual protein)|
          Length = 483

 Score = 36.6 bits (83), Expect = 0.018
 Identities = 17/49 (34%), Positives = 27/49 (55%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNG 149
           +L   F  +G V   KI+ D  T + +G+GFV+  + +    AI A+NG
Sbjct: 417 ALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRALNG 465



 Score = 32.0 bits (71), Expect = 0.45
 Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 13/61 (21%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRET-------------GRSRGFGFVTFASDEAMRQAIEAMN 146
           +++ FS  G++   K+I D+               G+S G+GFV +   +   QA+  +N
Sbjct: 165 IRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLN 224

Query: 147 G 149
           G
Sbjct: 225 G 225



 Score = 31.2 bits (69), Expect = 0.76
 Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETG-RSRGFGFVTFASDEAMRQAIEAMNG 149
           L+  F+ +G +I S+I+ +     +++G GF+ F   E   +AI A+NG
Sbjct: 264 LEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALNG 312

---

>MRD1_CANGA (Q6FXP4) Multiple RNA-binding domain-containing protein 1|
          Length = 861

 Score = 36.2 bits (82), Expect = 0.024
 Identities = 17/45 (37%), Positives = 25/45 (55%)
 Frame = +3

Query: 18  FSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQ 152
           FS YG++ +  +  D  TG S+GF +V FA  E   QA   ++ Q
Sbjct: 345 FSPYGELKEVHVAVDTRTGNSKGFAYVLFAKPEEAVQAYIELDKQ 389



 Score = 27.7 bits (60), Expect = 8.4
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +3

Query: 78  SRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           S GFGFV F + E     I AM+G  +D
Sbjct: 685 SMGFGFVEFRTKEQATAVISAMDGTVID 712

---

>IF34_MOUSE (Q9Z1D1) Eukaryotic translation initiation factor 3 subunit 4|
           (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding subunit)
           (eIF3 p42) (Eif3p42) (eIF3g)
          Length = 320

 Score = 36.2 bits (82), Expect = 0.024
 Identities = 17/52 (32%), Positives = 28/52 (53%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           LQ  F  +G +    +  D+ TG+S+GF F++F   E   +AI  ++G   D
Sbjct: 255 LQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYD 306

---

>IF34_HUMAN (O75821) Eukaryotic translation initiation factor 3 subunit 4|
           (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding subunit)
           (eIF3 p42) (eIF3g)
          Length = 320

 Score = 36.2 bits (82), Expect = 0.024
 Identities = 17/52 (32%), Positives = 28/52 (53%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           LQ  F  +G +    +  D+ TG+S+GF F++F   E   +AI  ++G   D
Sbjct: 255 LQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYD 306

---

>TADBP_MOUSE (Q921F2) TAR DNA-binding protein 43 (TDP-43)|
          Length = 414

 Score = 36.2 bits (82), Expect = 0.024
 Identities = 16/37 (43%), Positives = 25/37 (67%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDE 116
           L++ FS +G+V+  ++  D +TG S+GFGFV F   E
Sbjct: 120 LKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYE 156



 Score = 29.3 bits (64), Expect = 2.9
 Identities = 19/51 (37%), Positives = 27/51 (52%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 158
           LQ  F +YG+V+D  I         R F FVTFA D    +  +++ G+DL
Sbjct: 207 LQQFFCQYGEVVDVFIPKP-----FRAFAFVTFADD----KVAQSLCGEDL 248

---

>MK67I_XENTR (Q6GL69) MKI67 FHA domain-interacting nucleolar phosphoprotein-like|
          Length = 276

 Score = 36.2 bits (82), Expect = 0.024
 Identities = 15/47 (31%), Positives = 27/47 (57%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMN 146
           L+  FS++G V   ++   ++TG S+G+ +V F  DE  +   + MN
Sbjct: 57  LREYFSQFGTVTRLRLSRSKKTGNSKGYAYVEFECDEVAKIVADTMN 103

---

>CSX1_SCHPO (O13759) RNA-binding post-transcriptional regulator csx1|
          Length = 632

 Score = 35.8 bits (81), Expect = 0.031
 Identities = 18/43 (41%), Positives = 25/43 (58%)
 Frame = +3

Query: 21  SKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNG 149
           S Y     +KII D  TG SR +GFV F+S++  + A+  M G
Sbjct: 204 SIYPSCTSAKIIVDPVTGLSRKYGFVRFSSEKEQQHALMHMQG 246

---

>TADBP_HUMAN (Q13148) TAR DNA-binding protein 43 (TDP-43)|
          Length = 414

 Score = 35.8 bits (81), Expect = 0.031
 Identities = 16/37 (43%), Positives = 24/37 (64%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDE 116
           L+  FS +G+V+  ++  D +TG S+GFGFV F   E
Sbjct: 120 LKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYE 156



 Score = 31.6 bits (70), Expect = 0.58
 Identities = 21/51 (41%), Positives = 28/51 (54%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 158
           L+  FS+YGDV+D  I         R F FVTFA D    Q  +++ G+DL
Sbjct: 207 LREFFSQYGDVMDVFIPKP-----FRAFAFVTFADD----QIAQSLCGEDL 248

---

>PUF68_DROME (Q8T6B9) Poly U-binding splicing factor half pint (68 kDa poly|
           U-binding splicing factor) (Protein half pint) (PUF60
           homolog)
          Length = 637

 Score = 35.8 bits (81), Expect = 0.031
 Identities = 15/51 (29%), Positives = 30/51 (58%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 158
           +++ F  +G ++  K+         +G+GF+ +A+ +AM +AI +MN  DL
Sbjct: 243 IKSVFEAFGPILYCKLAQGTSLHTHKGYGFIEYANKQAMDEAIASMNLFDL 293



 Score = 32.0 bits (71), Expect = 0.45
 Identities = 15/49 (30%), Positives = 27/49 (55%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNG 149
           +++ AF+ +G +    +  D  T + +GF FV +   E  + A+E MNG
Sbjct: 145 TIRVAFTPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQMNG 193

---

>GBP2_YEAST (P25555) Single-strand telomeric DNA-binding protein GBP2|
           (G-strand-binding protein 2) (RAP1 localization factor
           6)
          Length = 427

 Score = 35.4 bits (80), Expect = 0.040
 Identities = 18/53 (33%), Positives = 33/53 (62%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           SL++ F + G V+ + +  D   G SRGFG V + +++ M +AI+  NG +++
Sbjct: 234 SLKDMFKECGHVLRADVELDFN-GFSRGFGSVIYPTEDEMIRAIDTFNGMEVE 285



 Score = 35.0 bits (79), Expect = 0.053
 Identities = 17/48 (35%), Positives = 28/48 (58%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNG 149
           L+  F   G+V+++ IIT +  G  RG G V F  +E+++ AI   +G
Sbjct: 138 LKELFGTVGEVVEADIITSK--GHHRGMGTVEFTKNESVQDAISKFDG 183

---

>NGR1_YEAST (P32831) Negative growth regulatory protein NGR1 (RNA-binding|
           protein RBP1)
          Length = 672

 Score = 35.4 bits (80), Expect = 0.040
 Identities = 16/44 (36%), Positives = 28/44 (63%)
 Frame = +3

Query: 21  SKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQ 152
           +++  V   +++TD  TG SR FGFV F  ++  R+A+  M+G+
Sbjct: 214 TRFKSVKTVRVMTDPLTGSSRCFGFVRFGDEDERRRALIEMSGK 257

---

>TRA2_DROVI (O02008) Transformer-2 sex-determining protein|
          Length = 272

 Score = 35.4 bits (80), Expect = 0.040
 Identities = 17/52 (32%), Positives = 30/52 (57%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           ++  F+K+G +   +++ D  T RSRGF F+ F +    R A +A  G ++D
Sbjct: 121 VRELFNKFGPIERIQMVIDAHTHRSRGFCFIYFENLGDARVAKDACTGMEVD 172

---

>PPIL4_NEUCR (Q871A4) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)|
           (PPIase) (Rotamase)
          Length = 494

 Score = 35.4 bits (80), Expect = 0.040
 Identities = 15/57 (26%), Positives = 31/57 (54%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLDXXXHH 176
           L+  FS++G ++  ++I D++TG S  + F+ F   ++  +A   M+   +D    H
Sbjct: 269 LELIFSRFGKILSCEVIRDQKTGDSLQYAFIEFEDKKSCEEAYSKMDSVLIDDRRIH 325

---

>NOP12_YARLI (Q6C2Q7) Nucleolar protein 12|
          Length = 509

 Score = 35.4 bits (80), Expect = 0.040
 Identities = 19/53 (35%), Positives = 31/53 (58%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           SL  AFS  GDV   +I+ D +T   +GF +V F    ++ QA+  +NG+ ++
Sbjct: 289 SLWEAFSSCGDVEYVRIVRDPKTNVGKGFAYVQFKDVNSVEQAL-LLNGKGIN 340

---

>MK67I_XENLA (Q7SYS2) MKI67 FHA domain-interacting nucleolar phosphoprotein-like|
          Length = 278

 Score = 35.4 bits (80), Expect = 0.040
 Identities = 14/47 (29%), Positives = 27/47 (57%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMN 146
           LQ  F+++G V   ++   ++TG S+G+ +V +  DE  +   + MN
Sbjct: 57  LQEYFNQFGTVTRLRLSRSKKTGNSKGYAYVEYECDEVAKIVADTMN 103

---

>RU17_ARATH (Q42404) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70|
           kDa) (snRNP70) (U1-70K)
          Length = 427

 Score = 35.0 bits (79), Expect = 0.053
 Identities = 13/52 (25%), Positives = 28/52 (53%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           ++  F  YG +    ++TD+ T + +G+ F+ +     M+ A +  +GQ +D
Sbjct: 154 IKREFESYGPIKRVHLVTDQLTNKPKGYAFIEYMHTRDMKAAYKQADGQKID 205

---

>RU17_DROME (P17133) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70|
           kDa) (snRNP70)
          Length = 448

 Score = 34.7 bits (78), Expect = 0.069
 Identities = 14/52 (26%), Positives = 29/52 (55%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           L+  F  YG +    +I D+E+G+ +G+ F+ +  +  M  A +  +G+ +D
Sbjct: 118 LRREFEFYGPIKKIVLIHDQESGKPKGYAFIEYEHERDMHAAYKHADGKKID 169

---

>IF34_SCHPO (P78795) Probable eukaryotic translation initiation factor 3|
           RNA-binding subunit (eIF-3 RNA-binding subunit) (eIF3
           p33) (Translation initiation factor eIF3, p33 subunit)
          Length = 282

 Score = 34.7 bits (78), Expect = 0.069
 Identities = 14/48 (29%), Positives = 30/48 (62%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNG 149
           L++ F ++G +    +  D+ETGR++GF FV++   +   +A + ++G
Sbjct: 218 LRDLFRRFGGIQRVYLAKDKETGRAKGFAFVSYYDRDCAIKARDRLDG 265

---

>RBM34_MOUSE (Q8C5L7) RNA-binding protein 34 (RNA-binding motif protein 34)|
          Length = 375

 Score = 34.3 bits (77), Expect = 0.090
 Identities = 15/50 (30%), Positives = 29/50 (58%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQ 152
           +L+  F   G ++  +I+ +  TG  RGFG+V F + +A+  A++  N +
Sbjct: 306 ALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLALKLNNSE 355

---

>RBM28_MOUSE (Q8CGC6) RNA-binding protein 28 (RNA-binding motif protein 28)|
          Length = 749

 Score = 34.3 bits (77), Expect = 0.090
 Identities = 15/44 (34%), Positives = 29/44 (65%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIE 137
           L+  FS+ G V    ++T++ +   RGFG+VTF+  E +++A++
Sbjct: 19  LEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALK 62

---

>FCA_ARATH (O04425) Flowering time control protein FCA|
          Length = 747

 Score = 34.3 bits (77), Expect = 0.090
 Identities = 18/48 (37%), Positives = 29/48 (60%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNG 149
           ++  F ++G V D  ++ D E  +SRG GFV ++S E    AI+ +NG
Sbjct: 227 VEEIFLQFGHVEDVYLMRD-EYRQSRGCGFVKYSSKETAMAAIDGLNG 273

---

>RBM34_RAT (Q5M9F1) RNA-binding protein 34 (RNA-binding motif protein 34)|
          Length = 428

 Score = 34.3 bits (77), Expect = 0.090
 Identities = 15/50 (30%), Positives = 29/50 (58%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQ 152
           +L+  F   G ++  +I+ +  TG  RGFG+V F + +A+  A++  N +
Sbjct: 300 ALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLALKLNNSE 349

---

>IST3_YEAST (P40565) U2 snRNP component IST3 (U2 snRNP protein SNU17)|
           (Increased sodium tolerance protein 3)
          Length = 148

 Score = 34.3 bits (77), Expect = 0.090
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = +3

Query: 18  FSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNG 149
           FS+YG  +D  +  D  TG S+GF ++ +    +   A++ +NG
Sbjct: 51  FSEYGVPVDVILSRDENTGESQGFAYLKYEDQRSTILAVDNLNG 94

---

>RBM28_HUMAN (Q9NW13) RNA-binding protein 28 (RNA-binding motif protein 28)|
          Length = 758

 Score = 34.3 bits (77), Expect = 0.090
 Identities = 15/44 (34%), Positives = 29/44 (65%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIE 137
           L+  FS+ G V    ++T++ +   RGFG+VTF+  E +++A++
Sbjct: 19  LEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALK 62



 Score = 31.6 bits (70), Expect = 0.58
 Identities = 16/51 (31%), Positives = 31/51 (60%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 158
           L+  F+++G V++  I   +  G+ RGFGFV F +     +A++ MN +++
Sbjct: 129 LKTVFAQFGAVLEVNI-PRKPDGKMRGFGFVQFKNLLEAGKALKGMNMKEI 178

---

>FUSIP_MOUSE (Q9R0U0) FUS-interacting serine-arginine-rich protein 1|
           (TLS-associated protein with Ser-Arg repeats)
           (TLS-associated protein with SR repeats) (TASR)
           (TLS-associated serine-arginine protein) (TLS-associated
           SR protein) (Neural-specific SR pro
          Length = 262

 Score = 34.3 bits (77), Expect = 0.090
 Identities = 18/50 (36%), Positives = 28/50 (56%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQD 155
           L+  F +YG ++D  +  D  T R RGF +V F   E +R A +A++  D
Sbjct: 26  LRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF---EDVRDAEDALHNLD 72

---

>FUSIP_HUMAN (O75494) FUS-interacting serine-arginine-rich protein 1|
           (TLS-associated protein with Ser-Arg repeats)
           (TLS-associated protein with SR repeats) (TASR)
           (TLS-associated serine-arginine protein) (TLS-associated
           SR protein) (40 kDa SR-repressor pr
          Length = 262

 Score = 34.3 bits (77), Expect = 0.090
 Identities = 18/50 (36%), Positives = 28/50 (56%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQD 155
           L+  F +YG ++D  +  D  T R RGF +V F   E +R A +A++  D
Sbjct: 26  LRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF---EDVRDAEDALHNLD 72

---

>RBM34_HUMAN (P42696) RNA-binding protein 34 (RNA-binding motif protein 34)|
          Length = 430

 Score = 34.3 bits (77), Expect = 0.090
 Identities = 13/50 (26%), Positives = 30/50 (60%)
 Frame = +3

Query: 3   SLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQ 152
           +++  F   G ++  +I+ D+ TG  +GFG+V F + +++  A++  N +
Sbjct: 302 AIEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLALKLNNSE 351

---

>A2BP1_MOUSE (Q9JJ43) Ataxin-2-binding protein 1|
          Length = 396

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 19/48 (39%), Positives = 31/48 (64%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNG 149
           L+  F ++G ++D +II + E G S+GFGFVTF +     +A E ++G
Sbjct: 132 LRQMFGQFGKILDVEIIFN-ERG-SKGFGFVTFENSADADRAREKLHG 177

---

>RBM9_HUMAN (O43251) RNA-binding protein 9 (RNA-binding motif protein 9)|
           (Hexaribonucleotide-binding protein 2) (Repressor of
           tamoxifen transcriptional activity)
          Length = 390

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 19/48 (39%), Positives = 31/48 (64%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNG 149
           L+  F ++G ++D +II + E G S+GFGFVTF +     +A E ++G
Sbjct: 137 LRQMFGQFGKILDVEIIFN-ERG-SKGFGFVTFENSADADRAREKLHG 182

---

>RBM19_HUMAN (Q9Y4C8) Probable RNA-binding protein 19 (RNA-binding motif protein|
           19)
          Length = 960

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 17/49 (34%), Positives = 26/49 (53%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQ 152
           L+  FSKYG + +     D  T + +GF F+TF   E   +A   ++GQ
Sbjct: 418 LEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSEVDGQ 466



 Score = 27.7 bits (60), Expect = 8.4
 Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRE-TGRSRGFGFVTFASDEAMRQAIEAM 143
           ++  FS +G++   ++      TG  RGFGFV F + +  ++A  A+
Sbjct: 848 IRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFNAL 894

---

>MK67I_MOUSE (Q91VE6) MKI67 FHA domain-interacting nucleolar phosphoprotein|
           (Nucleolar protein interacting with the FHA domain of
           pKI-67) (mNIFK)
          Length = 317

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 13/47 (27%), Positives = 27/47 (57%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMN 146
           + N  +++GD+   ++   + TG S+G+ FV F S++  +   E M+
Sbjct: 63  IYNYCAQFGDISRFRLSRSKRTGNSKGYAFVEFESEDVAKIVAETMD 109

---

>A2BP1_HUMAN (Q9NWB1) Ataxin-2-binding protein 1|
          Length = 397

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 19/48 (39%), Positives = 31/48 (64%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNG 149
           L+  F ++G ++D +II + E G S+GFGFVTF +     +A E ++G
Sbjct: 133 LRQMFGQFGKILDVEIIFN-ERG-SKGFGFVTFENSADADRAREKLHG 178

---

>MRD1_ASPFU (Q4WJT7) Multiple RNA-binding domain-containing protein 1|
          Length = 825

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 15/57 (26%), Positives = 29/57 (50%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLDXXXHH 176
           L+  FSK+G + +  +  D  +  S+GF +V +   +A  QA + ++G+       H
Sbjct: 317 LEPVFSKFGKIEEIHVAFDTRSTTSKGFAYVQYIEPDAAVQAYKELDGKHFQGRLMH 373



 Score = 28.1 bits (61), Expect = 6.4
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +3

Query: 78  SRGFGFVTFASDEAMRQAIEAMNGQDLD 161
           S GFGFV F +    + A+ AM+G  LD
Sbjct: 642 SMGFGFVDFRTKAQAQAALAAMDGYKLD 669

---

>HNRPC_RAT (P17132) Heterogeneous nuclear ribonucleoprotein C (hnRNP C) (hnRNP|
           core protein C) (Fragment)
          Length = 158

 Score = 33.5 bits (75), Expect = 0.15
 Identities = 13/44 (29%), Positives = 27/44 (61%)
 Frame = +3

Query: 6   LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIE 137
           ++  F  +G+V   ++  D +T + RGF F+TF  +E +++ +E
Sbjct: 50  IREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 93


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.314    0.121    0.362 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,907,090
Number of Sequences: 219361
Number of extensions: 195463
Number of successful extensions: 1523
Number of sequences better than 10.0: 317
Number of HSP's better than 10.0 without gapping: 1272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1491
length of database: 80,573,946
effective HSP length: 50
effective length of database: 69,605,896
effective search space used: 1670541504
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)

---