ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | basd18k06 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1063 bits (536), Expect = 0.0 Identities = 548/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120006 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 119947 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119946 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 119887 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119886 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 119828 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119827 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 119768 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 119767 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 119708 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119707 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 119648 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119647 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 119588 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119587 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 119528 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119527 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 119468 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 119467 ataggcagtgg 119457 Score = 1063 bits (536), Expect = 0.0 Identities = 548/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94888 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 94947 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94948 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 95007 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95008 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 95066 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95067 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 95126 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 95127 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 95186 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95187 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 95246 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95247 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 95306 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95307 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 95366 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95367 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 95426 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 95427 ataggcagtgg 95437
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1055 bits (532), Expect = 0.0 Identities = 547/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118787 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 118728 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118727 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 118668 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118667 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 118609 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118608 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 118549 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 118548 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 118489 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118488 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 118429 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118428 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 118369 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118368 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 118309 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118308 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 118249 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 118248 ataggcagtgg 118238
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 1055 bits (532), Expect = 0.0 Identities = 547/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 917 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 858 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 857 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 798 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 797 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 739 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 738 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 679 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 678 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 619 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 618 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 559 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 558 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 499 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 498 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 439 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 438 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 379 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 378 ataggcagtgg 368
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1055 bits (532), Expect = 0.0 Identities = 547/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119871 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 119812 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119811 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 119752 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119751 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 119693 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119692 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 119633 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 119632 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 119573 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119572 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 119513 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119512 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 119453 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119452 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 119393 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119392 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 119333 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 119332 ataggcagtgg 119322 Score = 1055 bits (532), Expect = 0.0 Identities = 547/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95285 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 95344 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95345 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 95404 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95405 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 95463 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95464 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 95523 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 95524 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 95583 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95584 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 95643 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95644 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 95703 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95704 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 95763 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95764 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 95823 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 95824 ataggcagtgg 95834
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1055 bits (532), Expect = 0.0 Identities = 547/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119871 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 119812 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119811 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 119752 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119751 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 119693 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119692 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 119633 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 119632 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 119573 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119572 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 119513 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119512 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 119453 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119452 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 119393 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119392 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 119333 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 119332 ataggcagtgg 119322 Score = 1055 bits (532), Expect = 0.0 Identities = 547/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95285 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 95344 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95345 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 95404 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95405 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 95463 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95464 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 95523 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 95524 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 95583 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95584 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 95643 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95644 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 95703 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95704 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 95763 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95764 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 95823 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 95824 ataggcagtgg 95834
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1055 bits (532), Expect = 0.0 Identities = 547/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119820 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 119761 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119760 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 119701 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119700 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 119642 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119641 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 119582 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 119581 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 119522 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119521 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 119462 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119461 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 119402 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119401 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 119342 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119341 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 119282 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 119281 ataggcagtgg 119271 Score = 1055 bits (532), Expect = 0.0 Identities = 547/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95230 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 95289 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95290 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 95349 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95350 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 95408 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95409 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 95468 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 95469 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 95528 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95529 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 95588 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95589 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 95648 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95649 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 95708 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95709 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 95768 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 95769 ataggcagtgg 95779
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1055 bits (532), Expect = 0.0 Identities = 547/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507863 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 31507922 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507923 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 31507982 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507983 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 31508041 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508042 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 31508101 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 31508102 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 31508161 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508162 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 31508221 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508222 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 31508281 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508282 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 31508341 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508342 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 31508401 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 31508402 ataggcagtgg 31508412
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1055 bits (532), Expect = 0.0 Identities = 547/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84733 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 84674 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84673 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 84614 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84613 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 84555 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84554 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 84495 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 84494 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 84435 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84434 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 84375 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 84315 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84314 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 84255 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84254 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 84195 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 84194 ataggcagtgg 84184
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1055 bits (532), Expect = 0.0 Identities = 547/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119840 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 119781 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119780 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 119721 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119720 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 119662 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119661 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 119602 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 119601 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 119542 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119541 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 119482 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119481 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 119422 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119421 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 119362 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119361 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 119302 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 119301 ataggcagtgg 119291 Score = 1055 bits (532), Expect = 0.0 Identities = 547/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95278 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 95337 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95338 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 95397 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95398 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 95456 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95457 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 95516 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 95517 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 95576 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95577 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 95636 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95637 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 95696 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95697 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 95756 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95757 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 95816 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 95817 ataggcagtgg 95827
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1055 bits (532), Expect = 0.0 Identities = 547/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122327 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 122386 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122387 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 122446 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122447 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 122505 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122506 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 122565 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 122566 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 122625 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122626 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 122685 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122686 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 122745 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122746 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 122805 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122806 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 122865 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 122866 ataggcagtgg 122876 Score = 1047 bits (528), Expect = 0.0 Identities = 546/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14052 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 14111 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14112 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 14171 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14172 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 14230 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14231 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 14290 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 14291 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 14350 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 14351 tagcttacgctctgacccgagtagcatggggcacgtggaatcctgtgtgaatcagcaagg 14410 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14411 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 14470 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14471 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 14530 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14531 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 14590 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 14591 ataggcagtgg 14601
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1055 bits (532), Expect = 0.0 Identities = 547/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44831 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 44772 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44771 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 44712 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44711 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 44653 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44652 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 44593 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 44592 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 44533 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44532 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 44473 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44472 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 44413 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44412 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 44353 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44352 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 44293 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 44292 ataggcagtgg 44282 Score = 1055 bits (532), Expect = 0.0 Identities = 547/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20287 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 20346 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20347 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 20406 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20407 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 20465 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20466 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 20525 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 20526 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 20585 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20586 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 20645 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20646 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 20705 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20706 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 20765 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20766 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 20825 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 20826 ataggcagtgg 20836
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1055 bits (532), Expect = 0.0 Identities = 547/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58559 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 58500 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58499 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 58440 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58439 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 58381 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58380 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 58321 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 58320 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 58261 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58260 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 58201 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58200 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 58141 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58140 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 58081 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58080 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 58021 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 58020 ataggcagtgg 58010
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1055 bits (532), Expect = 0.0 Identities = 547/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1460 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 1401 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1400 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 1341 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1340 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 1282 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1281 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 1222 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1221 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 1162 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1161 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 1102 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1101 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 1042 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1041 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 982 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 981 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 922 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 921 ataggcagtgg 911
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1055 bits (532), Expect = 0.0 Identities = 547/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268212 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 9268271 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268272 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 9268331 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268332 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 9268390 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268391 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 9268450 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 9268451 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 9268510 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268511 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 9268570 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268571 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 9268630 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268631 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 9268690 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268691 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 9268750 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 9268751 ataggcagtgg 9268761 Score = 1055 bits (532), Expect = 0.0 Identities = 547/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227712 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 9227771 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227772 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 9227831 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227832 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 9227890 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227891 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 9227950 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 9227951 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 9228010 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228011 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 9228070 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228071 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 9228130 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228131 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 9228190 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228191 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 9228250 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 9228251 ataggcagtgg 9228261 Score = 1055 bits (532), Expect = 0.0 Identities = 547/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164301 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 9164360 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164361 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 9164420 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164421 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 9164479 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164480 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 9164539 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 9164540 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 9164599 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164600 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 9164659 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164660 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 9164719 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164720 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 9164779 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164780 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 9164839 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 9164840 ataggcagtgg 9164850 Score = 1047 bits (528), Expect = 0.0 Identities = 546/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056126 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 9056185 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056186 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 9056245 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056246 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 9056304 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056305 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 9056364 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 9056365 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 9056424 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 9056425 tagcttacgctctgacccgagtagcatggggcacgtggaatcctgtgtgaatcagcaagg 9056484 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056485 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 9056544 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056545 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 9056604 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056605 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 9056664 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 9056665 ataggcagtgg 9056675 Score = 165 bits (83), Expect = 2e-37 Identities = 101/107 (94%) Strand = Plus / Minus Query: 401 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 460 |||||| |||||||||||||| || |||||||||||| |||||||||||||||||||||| Sbjct: 25171513 ggtgactgatagcgaagtagtgccatgagggaaaggtaaaaagaacccccagtgggtagt 25171454 Query: 461 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 507 |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 25171453 gaaatagaacatgaaaccgtgctgagctcccaagcagtggtagggga 25171407
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1055 bits (532), Expect = 0.0 Identities = 547/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938197 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 19938256 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938257 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 19938316 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938317 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 19938375 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938376 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 19938435 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 19938436 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 19938495 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938496 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 19938555 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938556 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 19938615 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938616 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 19938675 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938676 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 19938735 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 19938736 ataggcagtgg 19938746 Score = 1055 bits (532), Expect = 0.0 Identities = 547/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277234 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 10277175 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277174 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 10277115 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277114 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 10277056 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277055 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 10276996 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 10276995 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 10276936 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276935 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 10276876 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276875 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 10276816 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276815 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 10276756 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276755 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 10276696 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 10276695 ataggcagtgg 10276685 Score = 1047 bits (528), Expect = 0.0 Identities = 546/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387064 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 10387123 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387124 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 10387183 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387184 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 10387242 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387243 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 10387302 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 10387303 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 10387362 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387363 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 10387422 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387423 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 10387482 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387483 aggtgagaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 10387542 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387543 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 10387602 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 10387603 ataggcagtgg 10387613 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 419 agtaccgtgagggaaaggtgaaaagaacccc 449 ||||||||||||||||||||||||||||||| Sbjct: 2736641 agtaccgtgagggaaaggtgaaaagaacccc 2736611 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 244 ttgtgctgctaggcgaagcggttgagtgc 272 ||||||| ||||| ||||||||||||||| Sbjct: 8517723 ttgtgcttctaggtgaagcggttgagtgc 8517751
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1055 bits (532), Expect = 0.0 Identities = 547/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598379 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 31598438 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598439 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 31598498 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598499 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 31598557 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598558 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 31598617 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 31598618 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 31598677 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598678 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 31598737 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598738 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 31598797 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598798 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 31598857 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598858 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 31598917 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 31598918 ataggcagtgg 31598928
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1055 bits (532), Expect = 0.0 Identities = 547/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525695 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 33525754 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525755 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 33525814 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525815 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 33525873 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525874 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 33525933 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 33525934 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 33525993 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525994 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 33526053 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526054 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 33526113 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526114 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 33526173 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526174 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 33526233 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 33526234 ataggcagtgg 33526244 Score = 266 bits (134), Expect = 7e-68 Identities = 140/142 (98%) Strand = Plus / Minus Query: 423 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 482 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 16678101 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 16678042 Query: 483 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 542 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16678041 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 16677982 Query: 543 gccggcgactcataggcagtgg 564 |||||||||||||||||||||| Sbjct: 16677981 gccggcgactcataggcagtgg 16677960 Score = 194 bits (98), Expect = 2e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 437 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 496 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 32744772 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 32744713 Query: 497 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 546 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32744712 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 32744663 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 403 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 449 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33538588 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33538634 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 403 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 449 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33499956 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33500002 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 430 ggaaaggtgaaaagaacccccagtgggtagtgaaataga 468 |||||||||||||||||||| ||| |||||||||||||| Sbjct: 37705382 ggaaaggtgaaaagaacccctagtaggtagtgaaataga 37705420
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1055 bits (532), Expect = 0.0 Identities = 547/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47846 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 47787 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47786 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 47727 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47726 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 47668 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47667 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 47608 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 47607 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 47548 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47547 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 47488 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47487 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 47428 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47427 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 47368 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47367 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 47308 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 47307 ataggcagtgg 47297
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1055 bits (532), Expect = 0.0 Identities = 547/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70892 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 70951 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70952 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 71011 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71012 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 71070 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71071 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 71130 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 71131 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 71190 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71191 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 71250 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71251 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 71310 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71311 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 71370 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71371 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 71430 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 71431 ataggcagtgg 71441 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 403 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 449 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 83785 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 83831 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 403 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 449 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 45153 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 45199
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1055 bits (532), Expect = 0.0 Identities = 547/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123670 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 123611 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123610 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 123551 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123550 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 123492 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123491 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 123432 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 123431 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 123372 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123371 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 123312 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123311 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 123252 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123251 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 123192 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123191 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 123132 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 123131 ataggcagtgg 123121 Score = 1055 bits (532), Expect = 0.0 Identities = 547/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99167 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 99226 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99227 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 99286 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99287 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 99345 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99346 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 99405 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 99406 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 99465 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99466 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 99525 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99526 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 99585 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99586 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 99645 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99646 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 99705 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 99706 ataggcagtgg 99716
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 1055 bits (532), Expect = 0.0 Identities = 547/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 123 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 183 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 242 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 243 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 302 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 303 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 362 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 363 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 422 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 423 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 482 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 483 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 542 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 543 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 602 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 603 ataggcagtgg 613
>dbj|AK059835.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C02, full insert sequence Length = 1395 Score = 1055 bits (532), Expect = 0.0 Identities = 547/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 120 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 180 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 239 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 240 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 299 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 300 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 359 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 419 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 420 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 479 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 480 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 539 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 540 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 599 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 600 ataggcagtgg 610
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1055 bits (532), Expect = 0.0 Identities = 547/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949473 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 19949532 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949533 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 19949592 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949593 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 19949651 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949652 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 19949711 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 19949712 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 19949771 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949772 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 19949831 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949832 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 19949891 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949892 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 19949951 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949952 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 19950011 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 19950012 ataggcagtgg 19950022 Score = 1055 bits (532), Expect = 0.0 Identities = 547/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283273 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 10283214 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283213 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 10283154 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283153 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 10283095 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283094 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 10283035 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 10283034 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 10282975 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282974 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 10282915 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282914 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 10282855 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282854 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 10282795 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282794 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 10282735 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 10282734 ataggcagtgg 10282724 Score = 1047 bits (528), Expect = 0.0 Identities = 546/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393103 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 10393162 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393163 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 10393222 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393223 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 10393281 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393282 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 10393341 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 10393342 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 10393401 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393402 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 10393461 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393462 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 10393521 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393522 aggtgagaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 10393581 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393582 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 10393641 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 10393642 ataggcagtgg 10393652 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 403 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 449 ||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 2736608 tgaccgatagcatacaagtaccgtgagggaaaggtgaaaagaacccc 2736562 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 244 ttgtgctgctaggcgaagcggttgagtgc 272 ||||||| ||||| ||||||||||||||| Sbjct: 8522822 ttgtgcttctaggtgaagcggttgagtgc 8522850
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1055 bits (532), Expect = 0.0 Identities = 547/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124387 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 124328 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124327 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 124268 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124267 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 124209 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124208 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 124149 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 124148 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 124089 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124088 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 124029 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124028 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 123969 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123968 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 123909 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123908 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 123849 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 123848 ataggcagtgg 123838 Score = 1055 bits (532), Expect = 0.0 Identities = 547/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99844 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 99903 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99904 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 99963 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99964 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 100022 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100023 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 100082 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 100083 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 100142 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100143 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 100202 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100203 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 100262 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100263 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 100322 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100323 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 100382 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 100383 ataggcagtgg 100393
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1055 bits (532), Expect = 0.0 Identities = 547/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119814 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 119755 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119754 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 119695 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119694 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 119636 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119635 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 119576 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 119575 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 119516 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119515 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 119456 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119455 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 119396 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119395 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 119336 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119335 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 119276 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 119275 ataggcagtgg 119265 Score = 1055 bits (532), Expect = 0.0 Identities = 547/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95225 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 95284 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95285 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 95344 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95345 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 95403 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95404 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 95463 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 95464 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 95523 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95524 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 95583 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95584 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 95643 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95644 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 95703 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95704 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 95763 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 95764 ataggcagtgg 95774
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1047 bits (528), Expect = 0.0 Identities = 546/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140860 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 140919 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140920 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 140979 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140980 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 141038 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141039 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 141098 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 141099 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 141158 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 141159 tagcttacgctctgacccgagtagcatggggcacgtggaatcctgtgtgaatcagcaagg 141218 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141219 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 141278 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141279 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 141338 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141339 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 141398 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 141399 ataggcagtgg 141409
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1047 bits (528), Expect = 0.0 Identities = 546/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93456 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 93515 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93516 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 93575 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93576 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 93634 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93635 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 93694 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 93695 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 93754 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93755 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 93814 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93815 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 93874 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93875 aggtgagaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 93934 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93935 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 93994 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 93995 ataggcagtgg 94005
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1047 bits (528), Expect = 0.0 Identities = 546/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27520 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 27579 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27580 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 27639 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27640 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 27698 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27699 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 27758 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 27759 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 27818 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27819 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 27878 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27879 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 27938 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27939 aggtgagaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 27998 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27999 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 28058 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 28059 ataggcagtgg 28069
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1039 bits (524), Expect = 0.0 Identities = 545/551 (98%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9242069 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 9242010 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9242009 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 9241950 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 9241949 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcagcgagcgaaat 9241891 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241890 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 9241831 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 9241830 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 9241771 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241770 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 9241711 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241710 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 9241651 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241650 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 9241591 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 9241590 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagctggcgactc 9241531 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 9241530 ataggcagtgg 9241520 Score = 54.0 bits (27), Expect = 5e-04 Identities = 34/35 (97%), Gaps = 1/35 (2%) Strand = Plus / Minus Query: 125 actgaaacatcttagtagccagtaggaaaagaaag 159 |||||||||||||||||||||| |||||||||||| Sbjct: 10177929 actgaaacatcttagtagccag-aggaaaagaaag 10177896
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1039 bits (524), Expect = 0.0 Identities = 545/551 (98%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53282 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 53223 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53222 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 53163 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 53162 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcagcgagcgaaat 53104 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53103 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 53044 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 53043 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 52984 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52983 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 52924 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52923 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 52864 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52863 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 52804 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 52803 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagctggcgactc 52744 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 52743 ataggcagtgg 52733
>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full insert sequence Length = 3614 Score = 1039 bits (524), Expect = 0.0 Identities = 545/551 (98%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 80 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 81 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 140 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 199 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 200 gggagcagcctaaaccgtgaaaacggggttgtgggagagcagtacaagcgttgtgctgct 259 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 260 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 319 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 320 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 379 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 439 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 440 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 499 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 500 gcagtgggaggggaaattgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 559 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 560 ataggcagtgg 570
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1007 bits (508), Expect = 0.0 Identities = 542/551 (98%), Gaps = 2/551 (0%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123609 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 123550 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 123549 ccttttgaactgcctgccgaatccatgagcaggcaagagacaacctggcgaactgaaaca 123490 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123489 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 123431 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 123430 gggagcagcctaaaccgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgct 123371 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||| Sbjct: 123370 aggcgaagcggttgagtgccgcaccctagatggctatagtccagtagccgatagcatcac 123311 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123310 t-gcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 123252 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123251 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 123192 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123191 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 123132 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123131 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 123072 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 123071 ataggcagtgg 123061 Score = 1007 bits (508), Expect = 0.0 Identities = 542/551 (98%), Gaps = 2/551 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99128 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 99187 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 99188 ccttttgaactgcctgccgaatccatgagcaggcaagagacaacctggcgaactgaaaca 99247 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99248 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 99306 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 99307 gggagcagcctaaaccgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgct 99366 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||| Sbjct: 99367 aggcgaagcggttgagtgccgcaccctagatggctatagtccagtagccgatagcatcac 99426 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99427 t-gcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 99485 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99486 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 99545 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99546 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 99605 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99606 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 99665 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 99666 ataggcagtgg 99676
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1007 bits (508), Expect = 0.0 Identities = 542/551 (98%), Gaps = 2/551 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5481 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 5540 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 5541 ccttttgaactgcctgccgaatccatgagcaggcaagagacaacctggcgaactgaaaca 5600 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5601 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 5659 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 5660 gggagcagcctaaaccgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgct 5719 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||| Sbjct: 5720 aggcgaagcggttgagtgccgcaccctagatggctatagtccagtagccgatagcatcac 5779 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5780 t-gcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 5838 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5839 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 5898 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5899 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 5958 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5959 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 6018 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 6019 ataggcagtgg 6029
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1007 bits (508), Expect = 0.0 Identities = 542/551 (98%), Gaps = 2/551 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 69 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 128 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 129 ccttttgaactgcctgccgaatccatgagcaggcaagagacaacctggcgaactgaaaca 188 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 189 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 247 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 248 gggagcagcctaaaccgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgct 307 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||| Sbjct: 308 aggcgaagcggttgagtgccgcaccctagatggctatagtccagtagccgatagcatcac 367 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368 t-gcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 426 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 427 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 486 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 487 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 546 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 547 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 606 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 607 ataggcagtgg 617
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 995 bits (502), Expect = 0.0 Identities = 517/521 (99%), Gaps = 1/521 (0%) Strand = Plus / Plus Query: 44 catagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagc 103 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1 catagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagc 60 Query: 104 aggcaagagacaacctggcgaactgaaacatcttagtagccagtaggaaaagaaagcaaa 163 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 61 aggcaagagacaacctggcgaactgaaacatcttagtagccag-aggaaaagaaagcaaa 119 Query: 164 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 223 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 179 Query: 224 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctana 283 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 180 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 239 Query: 284 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 343 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 240 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 299 Query: 344 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 359 Query: 404 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 419 Query: 464 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 523 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 420 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 479 Query: 524 cgtgcctgttgaagaatgagccggcgactcataggcagtgg 564 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 480 cgtgcctgttgaagaatgagccggcgactcataggcagtgg 520
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 979 bits (494), Expect = 0.0 Identities = 512/517 (99%), Gaps = 1/517 (0%) Strand = Plus / Plus Query: 48 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 107 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 60 Query: 108 aagagacaacctggcgaactgaaacatcttagtagccagtaggaaaagaaagcaaaagcg 167 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 61 aagagacaacctggcgaactgaaacatcttagtagccag-aggaaaagaaagcaaaagcg 119 Query: 168 attcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgg 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 attcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgg 179 Query: 228 gagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggc 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 180 gagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggc 239 Query: 288 taaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcac 347 |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 240 taaagtccagtagccgaaagcatcgctagcttacgctctgacccgagtagcatggggcac 299 Query: 348 gtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacc 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 gtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacc 359 Query: 408 gatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatag 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 gatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatag 419 Query: 468 aacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtg 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 420 aacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtg 479 Query: 528 cctgttgaagaatgagccggcgactcataggcagtgg 564 ||||||||||||||||||||||||||||||||||||| Sbjct: 480 cctgttgaagaatgagccggcgactcataggcagtgg 516
>dbj|AK060204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-H12, full insert sequence Length = 1872 Score = 930 bits (469), Expect = 0.0 Identities = 481/484 (99%), Gaps = 1/484 (0%) Strand = Plus / Plus Query: 81 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 140 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 60 Query: 141 agccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagca 200 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagca 119 Query: 201 gcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa 260 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 gcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa 179 Query: 261 gcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcactagctta 320 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 180 gcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagctta 239 Query: 321 tgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacct 380 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 240 cgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacct 299 Query: 381 tgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaa 440 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 tgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaa 359 Query: 441 aagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgg 500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 aagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgg 419 Query: 501 gaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 560 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 420 gaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 479 Query: 561 gtgg 564 |||| Sbjct: 480 gtgg 483
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 876 bits (442), Expect = 0.0 Identities = 526/551 (95%), Gaps = 5/551 (0%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 139520 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaa 139461 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 139460 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 139402 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139401 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 139343 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 139342 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 139283 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||| |||| | |||||||| ||||| | ||||||||||||||||||||||| Sbjct: 139282 aggcgaagcggtggagtactgcaccctagatggcgagagtccagtagccgaaagcatcac 139223 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139222 tggcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 139163 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139162 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 139103 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||| ||| ||||||||||||| |||||||| ||||||||||| Sbjct: 139102 aggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaa 139046 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139045 gcagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 138986 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 138985 ataggcagtgg 138975 Score = 876 bits (442), Expect = 0.0 Identities = 526/551 (95%), Gaps = 5/551 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 110425 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaa 110484 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 110485 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 110543 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110544 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 110602 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 110603 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 110662 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||| |||| | |||||||| ||||| | ||||||||||||||||||||||| Sbjct: 110663 aggcgaagcggtggagtactgcaccctagatggcgagagtccagtagccgaaagcatcac 110722 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110723 tggcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 110782 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110783 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 110842 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||| ||| ||||||||||||| |||||||| ||||||||||| Sbjct: 110843 aggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaa 110899 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110900 gcagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 110959 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 110960 ataggcagtgg 110970
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 876 bits (442), Expect = 0.0 Identities = 526/551 (95%), Gaps = 5/551 (0%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 127798 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaa 127739 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 127738 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 127680 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 127679 tcttagtagccag-aggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaat 127621 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 127620 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcatgctgct 127561 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||| |||||| |||||||| ||||| | |||||||||||||||| |||||| Sbjct: 127560 aggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaaacatcac 127501 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127500 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 127441 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127440 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 127381 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||| ||| ||||||||||||| |||||||| ||||||||||| Sbjct: 127380 aggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaa 127324 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127323 gcagtgggaggagaatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 127264 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 127263 ataggcagtgg 127253 Score = 876 bits (442), Expect = 0.0 Identities = 526/551 (95%), Gaps = 5/551 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 107124 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaa 107183 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 107184 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 107242 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 107243 tcttagtagccag-aggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaat 107301 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 107302 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcatgctgct 107361 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||| |||||| |||||||| ||||| | |||||||||||||||| |||||| Sbjct: 107362 aggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaaacatcac 107421 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107422 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 107481 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107482 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 107541 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||| ||| ||||||||||||| |||||||| ||||||||||| Sbjct: 107542 aggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaa 107598 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107599 gcagtgggaggagaatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 107658 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 107659 ataggcagtgg 107669
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 876 bits (442), Expect = 0.0 Identities = 526/551 (95%), Gaps = 5/551 (0%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134157 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaa 134098 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 134097 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 134039 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134038 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 133980 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 133979 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 133920 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 ||||||||| || || ||| |||||||| ||||| | ||||||||||||||||||||||| Sbjct: 133919 aggcgaagcagtggaatgctgcaccctagatggcgagagtccagtagccgaaagcatcac 133860 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133859 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 133800 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133799 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 133740 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 133739 aggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 133683 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133682 gcagtgggaggagaatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 133623 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 133622 ataggcagtgg 133612 Score = 876 bits (442), Expect = 0.0 Identities = 526/551 (95%), Gaps = 5/551 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 103814 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaa 103873 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 103874 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 103932 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103933 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 103991 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 103992 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 104051 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 ||||||||| || || ||| |||||||| ||||| | ||||||||||||||||||||||| Sbjct: 104052 aggcgaagcagtggaatgctgcaccctagatggcgagagtccagtagccgaaagcatcac 104111 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104112 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 104171 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104172 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 104231 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 104232 aggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 104288 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104289 gcagtgggaggagaatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 104348 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 104349 ataggcagtgg 104359
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 860 bits (434), Expect = 0.0 Identities = 524/551 (95%), Gaps = 5/551 (0%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 142042 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatgggtcaa 141983 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 141982 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 141924 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141923 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 141865 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 141864 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 141805 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 ||||||||||||||||| | |||||||| ||||| | ||||||||| ||||||||||||| Sbjct: 141804 aggcgaagcggttgagtactgcaccctagatggcgagagtccagtaaccgaaagcatcac 141745 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141744 tggcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 141685 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141684 accaccttgtaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 141625 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||| ||| ||||||||||||| |||||||| ||||||||||| Sbjct: 141624 aggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaa 141568 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141567 gcagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 141508 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 141507 ataggcagtgg 141497 Score = 860 bits (434), Expect = 0.0 Identities = 524/551 (95%), Gaps = 5/551 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 111615 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatgggtcaa 111674 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 111675 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 111733 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111734 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 111792 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 111793 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 111852 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 ||||||||||||||||| | |||||||| ||||| | ||||||||| ||||||||||||| Sbjct: 111853 aggcgaagcggttgagtactgcaccctagatggcgagagtccagtaaccgaaagcatcac 111912 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111913 tggcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 111972 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111973 accaccttgtaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 112032 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||| ||| ||||||||||||| |||||||| ||||||||||| Sbjct: 112033 aggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaa 112089 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112090 gcagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 112149 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 112150 ataggcagtgg 112160
>dbj|AK105328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A07, full insert sequence Length = 1055 Score = 860 bits (434), Expect = 0.0 Identities = 449/453 (99%), Gaps = 1/453 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 124 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 184 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 185 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 243 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 303 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 304 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 363 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 423 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 424 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 483 Query: 434 aggtgaaaagaacccccagtgggtagtgaaata 466 ||||||||||||||||||||||||||||||||| Sbjct: 484 aggtgaaaagaacccccagtgggtagtgaaata 516
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 858 bits (433), Expect = 0.0 Identities = 524/551 (95%), Gaps = 9/551 (1%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134915 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaa 134856 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 134855 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 134797 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134796 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 134738 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 134737 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 134678 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 ||||||||| || |||||| |||||||| ||||||| ||||||||||||||||||||||| Sbjct: 134677 aggcgaagcagtggagtgctgcaccctagatggctagagtccagtagccgaaagcatcac 134618 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134617 tagcttacgttctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 134558 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134557 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 134498 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||| ||| ||||||||||||| |||||||| ||||||||||| Sbjct: 134497 aggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaa 134441 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 134440 gcagtgggaggagaa----atctctgaccgcgtgcctgttgaagaatgagccggcgactc 134385 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 134384 ataggcagtgg 134374 Score = 858 bits (433), Expect = 0.0 Identities = 524/551 (95%), Gaps = 9/551 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 105367 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaa 105426 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 105427 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 105485 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105486 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 105544 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 105545 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 105604 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 ||||||||| || |||||| |||||||| ||||||| ||||||||||||||||||||||| Sbjct: 105605 aggcgaagcagtggagtgctgcaccctagatggctagagtccagtagccgaaagcatcac 105664 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105665 tagcttacgttctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 105724 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105725 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 105784 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||| ||| ||||||||||||| |||||||| ||||||||||| Sbjct: 105785 aggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaa 105841 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 105842 gcagtgggaggagaa----atctctgaccgcgtgcctgttgaagaatgagccggcgactc 105897 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 105898 ataggcagtgg 105908
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 854 bits (431), Expect = 0.0 Identities = 524/551 (95%), Gaps = 7/551 (1%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 136525 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaa 136466 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 136465 cctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 136407 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136406 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 136348 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 136347 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 136288 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||| |||||| |||||||| ||||| | ||||||||||||||||||||||| Sbjct: 136287 aggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatcac 136228 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136227 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 136168 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136167 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 136108 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 136107 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 136051 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 ||||||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 136050 gcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 135993 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 135992 ataggcagtgg 135982 Score = 854 bits (431), Expect = 0.0 Identities = 524/551 (95%), Gaps = 7/551 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 105900 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaa 105959 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 105960 cctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 106018 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106019 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 106077 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 106078 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 106137 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||| |||||| |||||||| ||||| | ||||||||||||||||||||||| Sbjct: 106138 aggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatcac 106197 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106198 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 106257 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106258 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 106317 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 106318 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 106374 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 ||||||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 106375 gcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 106432 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 106433 ataggcagtgg 106443
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 837 bits (422), Expect = 0.0 Identities = 522/551 (94%), Gaps = 6/551 (1%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 132709 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggttaa 132650 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 132649 cctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 132591 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132590 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 132532 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 132531 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 132472 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 ||||||||| || || ||| |||||||| ||||| ||||||||||||||||||||||||| Sbjct: 132471 aggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcac 132412 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132411 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 132352 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132351 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 132292 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 132291 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 132235 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 ||||||||||| | | | ||||||||||||||||||||||||||||||||||||||| Sbjct: 132234 gcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactc 132176 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 132175 ataggcagtgg 132165 Score = 837 bits (422), Expect = 0.0 Identities = 522/551 (94%), Gaps = 6/551 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 104169 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggttaa 104228 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 104229 cctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 104287 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104288 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 104346 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 104347 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 104406 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 ||||||||| || || ||| |||||||| ||||| ||||||||||||||||||||||||| Sbjct: 104407 aggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcac 104466 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104467 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 104526 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104527 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 104586 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 104587 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 104643 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 ||||||||||| | | | ||||||||||||||||||||||||||||||||||||||| Sbjct: 104644 gcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactc 104702 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 104703 ataggcagtgg 104713
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 837 bits (422), Expect = 0.0 Identities = 522/551 (94%), Gaps = 6/551 (1%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| || Sbjct: 132932 gacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggttaa 132873 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 132872 ccttttgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 132814 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132813 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 132755 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| Sbjct: 132754 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgct 132695 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||| ||||||||||||||| ||||| | ||||||||||||||||||||||| Sbjct: 132694 aggcgaagcggtggagtgccgcaccctagatggcgagagtccagtagccgaaagcatcac 132635 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132634 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 132575 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132574 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 132515 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 132514 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 132458 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 ||||||||||| | || ||||||||||||||||||||||||||||||||||||||| Sbjct: 132457 gcagtgggaggag-ccctgggctctgaccgcgtgcctgttgaagaatgagccggcgactc 132399 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 132398 ataggcagtgg 132388 Score = 837 bits (422), Expect = 0.0 Identities = 522/551 (94%), Gaps = 6/551 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| || Sbjct: 103832 gacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggttaa 103891 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 103892 ccttttgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 103950 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103951 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 104009 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| Sbjct: 104010 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgct 104069 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||| ||||||||||||||| ||||| | ||||||||||||||||||||||| Sbjct: 104070 aggcgaagcggtggagtgccgcaccctagatggcgagagtccagtagccgaaagcatcac 104129 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104130 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 104189 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104190 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 104249 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 104250 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 104306 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 ||||||||||| | || ||||||||||||||||||||||||||||||||||||||| Sbjct: 104307 gcagtgggaggag-ccctgggctctgaccgcgtgcctgttgaagaatgagccggcgactc 104365 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 104366 ataggcagtgg 104376
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 837 bits (422), Expect = 0.0 Identities = 522/551 (94%), Gaps = 6/551 (1%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 132702 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggttaa 132643 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 132642 cctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 132584 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132583 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 132525 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 132524 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 132465 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 ||||||||| || || ||| |||||||| ||||| ||||||||||||||||||||||||| Sbjct: 132464 aggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcac 132405 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132404 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 132345 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132344 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 132285 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 132284 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 132228 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 ||||||||||| | | | ||||||||||||||||||||||||||||||||||||||| Sbjct: 132227 gcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactc 132169 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 132168 ataggcagtgg 132158 Score = 837 bits (422), Expect = 0.0 Identities = 522/551 (94%), Gaps = 6/551 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 104167 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggttaa 104226 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 104227 cctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 104285 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104286 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 104344 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 104345 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 104404 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 ||||||||| || || ||| |||||||| ||||| ||||||||||||||||||||||||| Sbjct: 104405 aggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcac 104464 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104465 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 104524 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104525 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 104584 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 104585 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 104641 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 ||||||||||| | | | ||||||||||||||||||||||||||||||||||||||| Sbjct: 104642 gcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactc 104700 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 104701 ataggcagtgg 104711
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 829 bits (418), Expect = 0.0 Identities = 521/551 (94%), Gaps = 6/551 (1%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 131601 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggttaa 131542 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 131541 cctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 131483 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131482 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 131424 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 131423 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 131364 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 ||||||||| || || ||| |||||||| ||||| ||||||||||||||||||||||||| Sbjct: 131363 aggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcac 131304 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131303 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 131244 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131243 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 131184 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 131183 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 131127 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 ||||||||||| | | | ||||||||||||||||||||||||||||||||||||||| Sbjct: 131126 gcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactc 131068 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 131067 ataggcagtgg 131057 Score = 829 bits (418), Expect = 0.0 Identities = 521/551 (94%), Gaps = 6/551 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 103034 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggttaa 103093 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 103094 cctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 103152 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103153 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 103211 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 103212 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 103271 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 ||||||||| || || ||| |||||||| ||||| ||||||||||||||||||||||||| Sbjct: 103272 aggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcac 103331 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103332 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 103391 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103392 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 103451 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 103452 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 103508 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 ||||||||||| | | | ||||||||||||||||||||||||||||||||||||||| Sbjct: 103509 gcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactc 103567 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 103568 ataggcagtgg 103578
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 829 bits (418), Expect = 0.0 Identities = 521/551 (94%), Gaps = 6/551 (1%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| || Sbjct: 133893 gacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggttaa 133834 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 133833 ccttttgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 133775 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133774 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 133716 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||| Sbjct: 133715 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaaaaaaagcgtcgtgctgct 133656 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||| ||||||||||||||| ||||| | ||||||||||||||||||||||| Sbjct: 133655 aggcgaagcggtggagtgccgcaccctagatggcgagagtccagtagccgaaagcatcac 133596 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133595 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 133536 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133535 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 133476 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 133475 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 133419 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 ||||||||||| | || ||||||||||||||||||||||||||||||||||||||| Sbjct: 133418 gcagtgggaggag-ccctgggctctgaccgcgtgcctgttgaagaatgagccggcgactc 133360 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 133359 ataggcagtgg 133349 Score = 829 bits (418), Expect = 0.0 Identities = 521/551 (94%), Gaps = 6/551 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| || Sbjct: 104756 gacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggttaa 104815 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 104816 ccttttgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 104874 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104875 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 104933 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||| Sbjct: 104934 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaaaaaaagcgtcgtgctgct 104993 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||| ||||||||||||||| ||||| | ||||||||||||||||||||||| Sbjct: 104994 aggcgaagcggtggagtgccgcaccctagatggcgagagtccagtagccgaaagcatcac 105053 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105054 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 105113 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105114 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 105173 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 105174 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 105230 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 ||||||||||| | || ||||||||||||||||||||||||||||||||||||||| Sbjct: 105231 gcagtgggaggag-ccctgggctctgaccgcgtgcctgttgaagaatgagccggcgactc 105289 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 105290 ataggcagtgg 105300
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 821 bits (414), Expect = 0.0 Identities = 520/551 (94%), Gaps = 6/551 (1%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 140294 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaa 140235 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 140234 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 140176 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140175 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 140117 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 140116 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 140057 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 ||||||||||| || ||| |||||||| ||||| | ||||||||||||||||||||||| Sbjct: 140056 aggcgaagcggcggaatgctgcaccctagatggcgagagtccagtagccgaaagcatcac 139997 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139996 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 139937 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139936 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 139877 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 ||||||||||||||||| ||| ||||||||||||| |||||||| | || |||||| Sbjct: 139876 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagttcccaa 139820 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 ||||||||||| | | | | ||||||||||||||||||||||||||||||||||||||| Sbjct: 139819 gcagtgggaggag-acgggggctctgaccgcgtgcctgttgaagaatgagccggcgactc 139761 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 139760 ataggcagtgg 139750 Score = 821 bits (414), Expect = 0.0 Identities = 520/551 (94%), Gaps = 6/551 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 109766 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaa 109825 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 109826 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 109884 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109885 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 109943 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 109944 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 110003 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 ||||||||||| || ||| |||||||| ||||| | ||||||||||||||||||||||| Sbjct: 110004 aggcgaagcggcggaatgctgcaccctagatggcgagagtccagtagccgaaagcatcac 110063 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110064 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 110123 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110124 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 110183 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 ||||||||||||||||| ||| ||||||||||||| |||||||| | || |||||| Sbjct: 110184 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagttcccaa 110240 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 ||||||||||| | | | | ||||||||||||||||||||||||||||||||||||||| Sbjct: 110241 gcagtgggaggag-acgggggctctgaccgcgtgcctgttgaagaatgagccggcgactc 110299 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 110300 ataggcagtgg 110310
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 821 bits (414), Expect = 0.0 Identities = 520/551 (94%), Gaps = 6/551 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| || Sbjct: 65 gacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggttaa 124 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 125 ccttttgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 183 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 242 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||| Sbjct: 243 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaaaaaaagcgtcgtgctgct 302 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||| ||||||||||||||| ||||| | |||||||||||||| |||||||| Sbjct: 303 aggcgaagcggtggagtgccgcaccctagatggcgagagtccagtagccgagagcatcac 362 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 363 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 422 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 423 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 482 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 483 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 539 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 ||||||||||| | || ||||||||||||||||||||||||||||||||||||||| Sbjct: 540 gcagtgggaggag-ccctgggctctgaccgcgtgcctgttgaagaatgagccggcgactc 598 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 599 ataggcagtgg 609
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 821 bits (414), Expect = 0.0 Identities = 520/551 (94%), Gaps = 6/551 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 74 gacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaa 133 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 134 cctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 192 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 193 tcttagtaaccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 251 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 252 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 311 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 ||||||||| || |||||| |||||||| ||||| | ||||||||||||||||||||||| Sbjct: 312 aggcgaagcagtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatcac 371 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 372 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 431 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 432 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 491 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 492 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 548 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 ||||||||||| | | | ||||||||||||||||||||||||||||||||||||||| Sbjct: 549 gcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactc 607 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 608 ataggcagtgg 618
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 817 bits (412), Expect = 0.0 Identities = 521/552 (94%), Gaps = 8/552 (1%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 136234 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaa 136175 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 136174 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 136116 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136115 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 136057 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 136056 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 135997 Query: 254 aggcgaagc-ggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatca 312 ||||||||| | || ||| |||||||| ||||| |||||||||||||||||||||||| Sbjct: 135996 aggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 135937 Query: 313 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135936 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 135877 Query: 373 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135876 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 135817 Query: 433 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 492 | ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||| Sbjct: 135816 agggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccca 135760 Query: 493 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 552 |||||||||||| | || | |||||||||||||||||||||||||||||||||||||| Sbjct: 135759 agcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgact 135702 Query: 553 cataggcagtgg 564 |||||||||||| Sbjct: 135701 cataggcagtgg 135690 Score = 817 bits (412), Expect = 0.0 Identities = 521/552 (94%), Gaps = 8/552 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 106396 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaa 106455 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 106456 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 106514 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106515 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 106573 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 106574 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 106633 Query: 254 aggcgaagc-ggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatca 312 ||||||||| | || ||| |||||||| ||||| |||||||||||||||||||||||| Sbjct: 106634 aggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 106693 Query: 313 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106694 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 106753 Query: 373 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106754 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 106813 Query: 433 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 492 | ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||| Sbjct: 106814 agggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccca 106870 Query: 493 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 552 |||||||||||| | || | |||||||||||||||||||||||||||||||||||||| Sbjct: 106871 agcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgact 106928 Query: 553 cataggcagtgg 564 |||||||||||| Sbjct: 106929 cataggcagtgg 106940
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 817 bits (412), Expect = 0.0 Identities = 521/552 (94%), Gaps = 8/552 (1%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 136872 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaa 136813 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 136812 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 136754 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136753 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 136695 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 136694 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 136635 Query: 254 aggcgaagcggt-tgagtgccgcaccctanatggctaaagtccagtagccgaaagcatca 312 ||||||||| | ||| ||| |||||||| ||||| |||||||||||||||||||||||| Sbjct: 136634 aggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 136575 Query: 313 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 372 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136574 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 136515 Query: 373 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136514 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 136455 Query: 433 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 492 | ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||| Sbjct: 136454 agggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccca 136398 Query: 493 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 552 |||||||||||| | || | |||||||||||||||||||||||||||||||||||||| Sbjct: 136397 agcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgact 136340 Query: 553 cataggcagtgg 564 |||||||||||| Sbjct: 136339 cataggcagtgg 136328 Score = 817 bits (412), Expect = 0.0 Identities = 521/552 (94%), Gaps = 8/552 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 106685 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaa 106744 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 106745 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 106803 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106804 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 106862 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 106863 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 106922 Query: 254 aggcgaagcggt-tgagtgccgcaccctanatggctaaagtccagtagccgaaagcatca 312 ||||||||| | ||| ||| |||||||| ||||| |||||||||||||||||||||||| Sbjct: 106923 aggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 106982 Query: 313 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 372 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106983 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 107042 Query: 373 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107043 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 107102 Query: 433 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 492 | ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||| Sbjct: 107103 agggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccca 107159 Query: 493 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 552 |||||||||||| | || | |||||||||||||||||||||||||||||||||||||| Sbjct: 107160 agcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgact 107217 Query: 553 cataggcagtgg 564 |||||||||||| Sbjct: 107218 cataggcagtgg 107229
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 817 bits (412), Expect = 0.0 Identities = 521/552 (94%), Gaps = 8/552 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 1590 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaa 1649 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1650 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 1708 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1709 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 1767 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1768 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 1827 Query: 254 aggcgaagc-ggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatca 312 ||||||||| | || ||| |||||||| ||||| |||||||||||||||||||||||| Sbjct: 1828 aggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 1887 Query: 313 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1888 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 1947 Query: 373 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1948 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 2007 Query: 433 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 492 | ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||| Sbjct: 2008 agggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccca 2064 Query: 493 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 552 |||||||||||| | || | |||||||||||||||||||||||||||||||||||||| Sbjct: 2065 agcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgact 2122 Query: 553 cataggcagtgg 564 |||||||||||| Sbjct: 2123 cataggcagtgg 2134
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 817 bits (412), Expect = 0.0 Identities = 521/552 (94%), Gaps = 8/552 (1%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 135480 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaa 135421 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 135420 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 135362 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135361 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 135303 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 135302 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 135243 Query: 254 aggcgaagcggt-tgagtgccgcaccctanatggctaaagtccagtagccgaaagcatca 312 ||||||||| | ||| ||| |||||||| ||||| |||||||||||||||||||||||| Sbjct: 135242 aggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 135183 Query: 313 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 372 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135182 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 135123 Query: 373 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135122 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 135063 Query: 433 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 492 | ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||| Sbjct: 135062 agggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccca 135006 Query: 493 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 552 |||||||||||| | || | |||||||||||||||||||||||||||||||||||||| Sbjct: 135005 agcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgact 134948 Query: 553 cataggcagtgg 564 |||||||||||| Sbjct: 134947 cataggcagtgg 134936 Score = 817 bits (412), Expect = 0.0 Identities = 521/552 (94%), Gaps = 8/552 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 105556 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaa 105615 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 105616 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 105674 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105675 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 105733 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 105734 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 105793 Query: 254 aggcgaagcggt-tgagtgccgcaccctanatggctaaagtccagtagccgaaagcatca 312 ||||||||| | ||| ||| |||||||| ||||| |||||||||||||||||||||||| Sbjct: 105794 aggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 105853 Query: 313 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 372 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105854 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 105913 Query: 373 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105914 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 105973 Query: 433 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 492 | ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||| Sbjct: 105974 agggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccca 106030 Query: 493 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 552 |||||||||||| | || | |||||||||||||||||||||||||||||||||||||| Sbjct: 106031 agcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgact 106088 Query: 553 cataggcagtgg 564 |||||||||||| Sbjct: 106089 cataggcagtgg 106100
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 817 bits (412), Expect = 0.0 Identities = 521/552 (94%), Gaps = 8/552 (1%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 135615 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaa 135556 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 135555 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 135497 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135496 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 135438 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 135437 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 135378 Query: 254 aggcgaagcggt-tgagtgccgcaccctanatggctaaagtccagtagccgaaagcatca 312 ||||||||| | ||| ||| |||||||| ||||| |||||||||||||||||||||||| Sbjct: 135377 aggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 135318 Query: 313 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 372 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135317 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 135258 Query: 373 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135257 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 135198 Query: 433 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 492 | ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||| Sbjct: 135197 agggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccca 135141 Query: 493 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 552 |||||||||||| | || | |||||||||||||||||||||||||||||||||||||| Sbjct: 135140 agcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgact 135083 Query: 553 cataggcagtgg 564 |||||||||||| Sbjct: 135082 cataggcagtgg 135071 Score = 817 bits (412), Expect = 0.0 Identities = 521/552 (94%), Gaps = 8/552 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 105728 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaa 105787 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 105788 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 105846 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105847 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 105905 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 105906 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 105965 Query: 254 aggcgaagcggt-tgagtgccgcaccctanatggctaaagtccagtagccgaaagcatca 312 ||||||||| | ||| ||| |||||||| ||||| |||||||||||||||||||||||| Sbjct: 105966 aggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 106025 Query: 313 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 372 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106026 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 106085 Query: 373 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106086 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 106145 Query: 433 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 492 | ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||| Sbjct: 106146 agggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccca 106202 Query: 493 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 552 |||||||||||| | || | |||||||||||||||||||||||||||||||||||||| Sbjct: 106203 agcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgact 106260 Query: 553 cataggcagtgg 564 |||||||||||| Sbjct: 106261 cataggcagtgg 106272
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 817 bits (412), Expect = 0.0 Identities = 521/552 (94%), Gaps = 8/552 (1%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 135613 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaa 135554 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 135553 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 135495 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135494 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 135436 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 135435 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 135376 Query: 254 aggcgaagcggt-tgagtgccgcaccctanatggctaaagtccagtagccgaaagcatca 312 ||||||||| | ||| ||| |||||||| ||||| |||||||||||||||||||||||| Sbjct: 135375 aggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 135316 Query: 313 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 372 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135315 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 135256 Query: 373 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135255 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 135196 Query: 433 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 492 | ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||| Sbjct: 135195 agggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccca 135139 Query: 493 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 552 |||||||||||| | || | |||||||||||||||||||||||||||||||||||||| Sbjct: 135138 agcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgact 135081 Query: 553 cataggcagtgg 564 |||||||||||| Sbjct: 135080 cataggcagtgg 135069 Score = 817 bits (412), Expect = 0.0 Identities = 521/552 (94%), Gaps = 8/552 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 105725 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaa 105784 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 105785 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 105843 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105844 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 105902 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 105903 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 105962 Query: 254 aggcgaagcggt-tgagtgccgcaccctanatggctaaagtccagtagccgaaagcatca 312 ||||||||| | ||| ||| |||||||| ||||| |||||||||||||||||||||||| Sbjct: 105963 aggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 106022 Query: 313 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 372 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106023 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 106082 Query: 373 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106083 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 106142 Query: 433 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 492 | ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||| Sbjct: 106143 agggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccca 106199 Query: 493 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 552 |||||||||||| | || | |||||||||||||||||||||||||||||||||||||| Sbjct: 106200 agcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgact 106257 Query: 553 cataggcagtgg 564 |||||||||||| Sbjct: 106258 cataggcagtgg 106269
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 817 bits (412), Expect = 0.0 Identities = 521/552 (94%), Gaps = 8/552 (1%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 135525 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaa 135466 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 135465 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 135407 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135406 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 135348 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 135347 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 135288 Query: 254 aggcgaagcggt-tgagtgccgcaccctanatggctaaagtccagtagccgaaagcatca 312 ||||||||| | ||| ||| |||||||| ||||| |||||||||||||||||||||||| Sbjct: 135287 aggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 135228 Query: 313 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 372 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135227 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 135168 Query: 373 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135167 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 135108 Query: 433 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 492 | ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||| Sbjct: 135107 agggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccca 135051 Query: 493 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 552 |||||||||||| | || | |||||||||||||||||||||||||||||||||||||| Sbjct: 135050 agcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgact 134993 Query: 553 cataggcagtgg 564 |||||||||||| Sbjct: 134992 cataggcagtgg 134981 Score = 817 bits (412), Expect = 0.0 Identities = 521/552 (94%), Gaps = 8/552 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 105603 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaa 105662 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 105663 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 105721 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105722 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 105780 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 105781 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 105840 Query: 254 aggcgaagcggt-tgagtgccgcaccctanatggctaaagtccagtagccgaaagcatca 312 ||||||||| | ||| ||| |||||||| ||||| |||||||||||||||||||||||| Sbjct: 105841 aggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 105900 Query: 313 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 372 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105901 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 105960 Query: 373 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105961 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 106020 Query: 433 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 492 | ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||| Sbjct: 106021 agggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccca 106077 Query: 493 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 552 |||||||||||| | || | |||||||||||||||||||||||||||||||||||||| Sbjct: 106078 agcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgact 106135 Query: 553 cataggcagtgg 564 |||||||||||| Sbjct: 106136 cataggcagtgg 106147
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 817 bits (412), Expect = 0.0 Identities = 521/552 (94%), Gaps = 8/552 (1%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 136232 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaa 136173 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 136172 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 136114 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136113 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 136055 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 136054 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 135995 Query: 254 aggcgaagc-ggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatca 312 ||||||||| | || ||| |||||||| ||||| |||||||||||||||||||||||| Sbjct: 135994 aggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 135935 Query: 313 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135934 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 135875 Query: 373 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135874 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 135815 Query: 433 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 492 | ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||| Sbjct: 135814 agggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccca 135758 Query: 493 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 552 |||||||||||| | || | |||||||||||||||||||||||||||||||||||||| Sbjct: 135757 agcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgact 135700 Query: 553 cataggcagtgg 564 |||||||||||| Sbjct: 135699 cataggcagtgg 135688 Score = 817 bits (412), Expect = 0.0 Identities = 521/552 (94%), Gaps = 8/552 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 106394 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaa 106453 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 106454 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 106512 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106513 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 106571 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 106572 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 106631 Query: 254 aggcgaagc-ggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatca 312 ||||||||| | || ||| |||||||| ||||| |||||||||||||||||||||||| Sbjct: 106632 aggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 106691 Query: 313 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106692 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 106751 Query: 373 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106752 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 106811 Query: 433 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 492 | ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||| Sbjct: 106812 agggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccca 106868 Query: 493 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 552 |||||||||||| | || | |||||||||||||||||||||||||||||||||||||| Sbjct: 106869 agcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgact 106926 Query: 553 cataggcagtgg 564 |||||||||||| Sbjct: 106927 cataggcagtgg 106938
>dbj|AK060245.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G06, full insert sequence Length = 1707 Score = 809 bits (408), Expect = 0.0 Identities = 423/427 (99%), Gaps = 1/427 (0%) Strand = Plus / Plus Query: 36 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 95 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1 aaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaat 60 Query: 96 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagtaggaaaag 155 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 61 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag-aggaaaag 119 Query: 156 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 215 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 179 Query: 216 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 275 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 239 Query: 276 accctanatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 335 |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 240 accctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 299 Query: 336 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 395 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 359 Query: 396 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 455 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 419 Query: 456 gtagtga 462 ||||||| Sbjct: 420 gtagtga 426
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 809 bits (408), Expect = 0.0 Identities = 520/552 (94%), Gaps = 8/552 (1%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||| Sbjct: 135963 gacgaaatgcttcggggagttgaaaataagcatagatccggggattcccgaatagggcaa 135904 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 135903 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 135845 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135844 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 135786 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 135785 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 135726 Query: 254 aggcgaagc-ggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatca 312 ||||||||| | || ||| |||||||| ||||| |||||||||||||||||||||||| Sbjct: 135725 aggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 135666 Query: 313 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135665 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 135606 Query: 373 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135605 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 135546 Query: 433 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 492 | ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||| Sbjct: 135545 agggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccca 135489 Query: 493 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 552 |||||||||||| | || | |||||||||||||||||||||||||||||||||||||| Sbjct: 135488 agcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgact 135431 Query: 553 cataggcagtgg 564 |||||||||||| Sbjct: 135430 cataggcagtgg 135419 Score = 809 bits (408), Expect = 0.0 Identities = 520/552 (94%), Gaps = 8/552 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||| Sbjct: 106175 gacgaaatgcttcggggagttgaaaataagcatagatccggggattcccgaatagggcaa 106234 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 106235 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 106293 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106294 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 106352 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 106353 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 106412 Query: 254 aggcgaagc-ggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatca 312 ||||||||| | || ||| |||||||| ||||| |||||||||||||||||||||||| Sbjct: 106413 aggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 106472 Query: 313 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106473 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 106532 Query: 373 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106533 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 106592 Query: 433 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 492 | ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||| Sbjct: 106593 agggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccca 106649 Query: 493 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 552 |||||||||||| | || | |||||||||||||||||||||||||||||||||||||| Sbjct: 106650 agcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgact 106707 Query: 553 cataggcagtgg 564 |||||||||||| Sbjct: 106708 cataggcagtgg 106719
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 809 bits (408), Expect = 0.0 Identities = 520/552 (94%), Gaps = 8/552 (1%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 135492 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaa 135433 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 135432 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 135374 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135373 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 135315 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 135314 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 135255 Query: 254 aggcgaagcggt-tgagtgccgcaccctanatggctaaagtccagtagccgaaagcatca 312 ||||||||| | ||| ||| |||||||| ||||| |||||||||||||||||||||||| Sbjct: 135254 aggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 135195 Query: 313 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 372 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135194 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 135135 Query: 373 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135134 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 135075 Query: 433 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 492 | ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||| Sbjct: 135074 agggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccca 135018 Query: 493 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 552 |||||||||||| | || | |||||||||||||||||||||||||||||||||||||| Sbjct: 135017 agcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgact 134960 Query: 553 cataggcagtgg 564 ||||||||||| Sbjct: 134959 aataggcagtgg 134948 Score = 809 bits (408), Expect = 0.0 Identities = 520/552 (94%), Gaps = 8/552 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 105570 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaa 105629 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 105630 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 105688 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105689 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 105747 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 105748 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 105807 Query: 254 aggcgaagcggt-tgagtgccgcaccctanatggctaaagtccagtagccgaaagcatca 312 ||||||||| | ||| ||| |||||||| ||||| |||||||||||||||||||||||| Sbjct: 105808 aggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 105867 Query: 313 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 372 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105868 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 105927 Query: 373 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105928 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 105987 Query: 433 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 492 | ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||| Sbjct: 105988 agggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccca 106044 Query: 493 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 552 |||||||||||| | || | |||||||||||||||||||||||||||||||||||||| Sbjct: 106045 agcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgact 106102 Query: 553 cataggcagtgg 564 ||||||||||| Sbjct: 106103 aataggcagtgg 106114
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 805 bits (406), Expect = 0.0 Identities = 518/551 (94%), Gaps = 6/551 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||| Sbjct: 106071 gacgaaatgcttcggggagttgcaaataagcgtagatccggagattcccgaataggtcaa 106130 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 106131 cctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 106189 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106190 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 106248 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 106249 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 106308 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 ||||||||| || ||||| |||||||| ||||| | ||||||||||||||||||||||| Sbjct: 106309 aggcgaagcagtggagtgttgcaccctagatggcgagagtccagtagccgaaagcatcac 106368 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106369 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 106428 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 106429 accaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaa 106488 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 ||||||||||||||||| ||| ||||||||||||| |||||||| | |||| |||| Sbjct: 106489 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagcttccaa 106545 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 ||||||||||| | | | | ||||||||||||||||||||||||||||||||||||||| Sbjct: 106546 gcagtgggaggag-acgaggactctgaccgcgtgcctgttgaagaatgagccggcgactc 106604 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 106605 ataggcagtgg 106615 Score = 755 bits (381), Expect = 0.0 Identities = 517/554 (93%), Gaps = 9/554 (1%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||| Sbjct: 135838 gacgaaatgcttcggggagttgcaaataagcgtagatccggagattcccgaataggtcaa 135779 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 135778 cctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 135720 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135719 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 135661 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagc-aatacaagcgttgtgctgc 252 |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 135660 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaaatacaagcgtcgtgctgc 135601 Query: 253 taggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatca 312 |||||||||| || ||||| |||||||| ||||| | |||||||||||||||||||||| Sbjct: 135600 taggcgaagcagtggagtgttgcaccctagatggcgagagtccagtagccgaaagcatca 135541 Query: 313 ctagcttatg-ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcag-ca 370 |||||||| | | |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 135540 ctagcttacgcccctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcca 135481 Query: 371 aggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagg 430 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 135480 aggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagg 135421 Query: 431 gaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcc 490 ||| ||||||||||||||||| ||| ||||||||||||| |||||||| | |||| | Sbjct: 135420 gaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagcttc 135364 Query: 491 caagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 550 |||||||||||||| | | | | |||||||||||||||||||||||||||||||||||| Sbjct: 135363 caagcagtgggaggag-acgaggactctgaccgcgtgcctgttgaagaatgagccggcga 135305 Query: 551 ctcataggcagtgg 564 |||||||||||||| Sbjct: 135304 ctcataggcagtgg 135291
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 805 bits (406), Expect = 0.0 Identities = 518/551 (94%), Gaps = 6/551 (1%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| Sbjct: 131725 gacgaaatgcttcggggagttgaaaataagcagagatccggagattcccgaataggtcaa 131666 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| |||| | ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 131665 cctttcgaacttc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 131607 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131606 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 131548 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 131547 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 131488 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 ||||||| | || |||||| | |||||| |||| ||||||||||||||||||||||||| Sbjct: 131487 aggcgaatcagtggagtgcggaaccctagatggtgaaagtccagtagccgaaagcatcac 131428 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131427 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 131368 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131367 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 131308 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||| ||| Sbjct: 131307 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctctcaa 131251 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 ||||||||||||| | || | ||||||||||||||||||||||||||||||||||||| Sbjct: 131250 gcagtgggagggggaccaga-ccctgaccgcgtgcctgttgaagaatgagccggcgactc 131192 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 131191 ataggcagtgg 131181 Score = 805 bits (406), Expect = 0.0 Identities = 518/551 (94%), Gaps = 6/551 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| Sbjct: 101720 gacgaaatgcttcggggagttgaaaataagcagagatccggagattcccgaataggtcaa 101779 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| |||| | ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 101780 cctttcgaacttc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 101838 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101839 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 101897 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 101898 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 101957 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 ||||||| | || |||||| | |||||| |||| ||||||||||||||||||||||||| Sbjct: 101958 aggcgaatcagtggagtgcggaaccctagatggtgaaagtccagtagccgaaagcatcac 102017 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102018 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 102077 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102078 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 102137 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||| ||| Sbjct: 102138 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctctcaa 102194 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 ||||||||||||| | || | ||||||||||||||||||||||||||||||||||||| Sbjct: 102195 gcagtgggagggggaccaga-ccctgaccgcgtgcctgttgaagaatgagccggcgactc 102253 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 102254 ataggcagtgg 102264
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 805 bits (406), Expect = 0.0 Identities = 518/551 (94%), Gaps = 6/551 (1%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||| Sbjct: 136114 gacgaaatgcttcggggagttgcaaataagcgtagatccggagattcccgaataggtcaa 136055 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 136054 cctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 135996 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135995 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 135937 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 135936 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 135877 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 ||||||||| || ||||| |||||||| ||||| | ||||||||||||||||||||||| Sbjct: 135876 aggcgaagcagtggagtgttgcaccctagatggcgagagtccagtagccgaaagcatcac 135817 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135816 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 135757 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 135756 accaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaa 135697 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 ||||||||||||||||| ||| ||||||||||||| |||||||| | |||| |||| Sbjct: 135696 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagcttccaa 135640 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 ||||||||||| | | | | ||||||||||||||||||||||||||||||||||||||| Sbjct: 135639 gcagtgggaggag-acgaggactctgaccgcgtgcctgttgaagaatgagccggcgactc 135581 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 135580 ataggcagtgg 135570 Score = 805 bits (406), Expect = 0.0 Identities = 518/551 (94%), Gaps = 6/551 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||| Sbjct: 106293 gacgaaatgcttcggggagttgcaaataagcgtagatccggagattcccgaataggtcaa 106352 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 106353 cctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 106411 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106412 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 106470 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 106471 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 106530 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 ||||||||| || ||||| |||||||| ||||| | ||||||||||||||||||||||| Sbjct: 106531 aggcgaagcagtggagtgttgcaccctagatggcgagagtccagtagccgaaagcatcac 106590 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106591 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 106650 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 106651 accaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaa 106710 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 ||||||||||||||||| ||| ||||||||||||| |||||||| | |||| |||| Sbjct: 106711 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagcttccaa 106767 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 ||||||||||| | | | | ||||||||||||||||||||||||||||||||||||||| Sbjct: 106768 gcagtgggaggag-acgaggactctgaccgcgtgcctgttgaagaatgagccggcgactc 106826 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 106827 ataggcagtgg 106837
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 801 bits (404), Expect = 0.0 Identities = 520/552 (94%), Gaps = 9/552 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 41 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaa 100 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 101 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 159 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 218 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 219 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 278 Query: 254 aggcgaagcggt-tgagtgccgcaccctanatggctaaagtccagtagccgaaagcatca 312 ||||||||| | ||| ||| |||||| | ||||| |||||||||||||||||||||||| Sbjct: 279 aggcgaagcagcctgaatgctgcaccc-atatggcgaaagtccagtagccgaaagcatca 337 Query: 313 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 372 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 338 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 397 Query: 373 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 398 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 457 Query: 433 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 492 | ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||| Sbjct: 458 agggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccca 514 Query: 493 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 552 |||||||||||| | || | |||||||||||||||||||||||||||||||||||||| Sbjct: 515 agcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgact 572 Query: 553 cataggcagtgg 564 |||||||||||| Sbjct: 573 cataggcagtgg 584
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 799 bits (403), Expect = 0.0 Identities = 408/410 (99%) Strand = Plus / Plus Query: 155 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 214 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 60 Query: 215 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 274 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 120 Query: 275 caccctanatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 334 ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 121 caccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgag 180 Query: 335 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 394 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 240 Query: 395 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 454 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 300 Query: 455 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 514 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 360 Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 564 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 410
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 799 bits (403), Expect = 0.0 Identities = 519/552 (94%), Gaps = 7/552 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 66 gacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaa 125 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| ||||||| ||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 126 cctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctaacgaactgaaaca 184 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagc-ggcgagcgaaa 192 ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 185 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcaggcgagcgaaa 243 Query: 193 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 244 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgc 303 Query: 253 taggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatca 312 ||||||||||||| ||||||| |||||| ||||||| |||||||||||||||||||||| Sbjct: 304 taggcgaagcggtgaagtgccgaaccctagatggctagagtccagtagccgaaagcatca 363 Query: 313 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 372 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 423 Query: 373 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 432 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 424 gaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgaggga 483 Query: 433 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 492 | ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||| Sbjct: 484 agggtgaaaagaacccccaccggggagtgaaatagaacatgaaaccg---taagctccca 540 Query: 493 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 552 |||||||||||| | | | |||||||||||||||||||||||||||||||||||||| Sbjct: 541 agcagtgggaggagcctg-gggctctgaccgcgtgcctgttgaagaatgagccggcgact 599 Query: 553 cataggcagtgg 564 |||||||||||| Sbjct: 600 cataggcagtgg 611
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 795 bits (401), Expect = 0.0 Identities = 406/408 (99%) Strand = Plus / Plus Query: 157 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 216 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 217 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 277 ccctanatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 336 ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 337 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 397 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 457 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 516 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 360 Query: 517 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 564 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 408
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 795 bits (401), Expect = 0.0 Identities = 406/408 (99%) Strand = Plus / Plus Query: 157 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 216 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 217 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 277 ccctanatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 336 ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 337 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 397 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 457 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 516 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 360 Query: 517 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 564 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 408
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 793 bits (400), Expect = 0.0 Identities = 405/407 (99%) Strand = Plus / Plus Query: 158 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 217 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 Query: 218 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 277 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 Query: 278 cctanatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 337 |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 180 Query: 338 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 397 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 Query: 398 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 457 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 Query: 458 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 Query: 518 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 564 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 407
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 793 bits (400), Expect = 0.0 Identities = 405/407 (99%) Strand = Plus / Plus Query: 158 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 217 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 63 Query: 218 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 277 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 123 Query: 278 cctanatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 337 |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 124 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 183 Query: 338 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 397 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 243 Query: 398 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 457 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 303 Query: 458 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 304 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 363 Query: 518 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 564 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 410
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 789 bits (398), Expect = 0.0 Identities = 515/551 (93%), Gaps = 5/551 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||| || Sbjct: 67 gacgaaatgcttcggggagctgaaaataagcatagatccggagattcccgaatgggttaa 126 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| |||||| |||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 127 ccttttgaactgc-tgctgaattcataggcaggcaagagacaacctggcgaactgaaaca 185 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 186 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 244 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||| |||||||||||||||||||||||||||||||||||||| ||| |||||| |||| Sbjct: 245 gggagtagcctaaaccgtgaaaacggggttgtgggagagcaatataagtgttgtgttgct 304 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 ||||||||||||||||| |||||||| | |||| | ||||||||||||||||||||||| Sbjct: 305 aggcgaagcggttgagtcccgcaccccagatggtgagagtccagtagccgaaagcatcac 364 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 365 tagcttacgctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 424 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 425 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 484 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 485 aggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 541 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 542 gcagtgggaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgactt 601 Query: 554 ataggcagtgg 564 ||||| ||||| Sbjct: 602 ataggtagtgg 612
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 789 bits (398), Expect = 0.0 Identities = 403/405 (99%) Strand = Plus / Plus Query: 160 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 219 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 60 Query: 220 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 279 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 120 Query: 280 tanatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagca 339 || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 121 tagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagca 180 Query: 340 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 399 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 240 Query: 400 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 459 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 300 Query: 460 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 519 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 360 Query: 520 accgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 564 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 accgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 405
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 785 bits (396), Expect = 0.0 Identities = 517/552 (93%), Gaps = 8/552 (1%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 139438 gacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaa 139379 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| |||||| ||||||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 139378 cctttcgaactgc-tgctgaatccatgggcagacaagagacaacctggcgaactgaaaca 139320 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139319 tcttagtagccgg-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 139261 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| Sbjct: 139260 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgct 139201 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||| ||||||| |||||| ||||| | ||||||||||||||||||||||| Sbjct: 139200 aggcgaagcggtgaagtgccgaaccctagatggcgatagtccagtagccgaaagcatcac 139141 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139140 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 139081 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139080 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 139021 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 139020 gggtgaaaagaacccccgtcggggagtgaaatagaacatgaaaccg---taagctcccaa 138964 Query: 494 gcagtgggagg-ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 552 ||||||||||| | || | |||||||||||||||||||||||||||||||||||||| Sbjct: 138963 gcagtgggaggagcccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgact 138906 Query: 553 cataggcagtgg 564 |||||||||||| Sbjct: 138905 cataggcagtgg 138894 Score = 785 bits (396), Expect = 0.0 Identities = 517/552 (93%), Gaps = 8/552 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 109659 gacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaa 109718 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| |||||| ||||||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 109719 cctttcgaactgc-tgctgaatccatgggcagacaagagacaacctggcgaactgaaaca 109777 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109778 tcttagtagccgg-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 109836 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| Sbjct: 109837 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgct 109896 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||| ||||||| |||||| ||||| | ||||||||||||||||||||||| Sbjct: 109897 aggcgaagcggtgaagtgccgaaccctagatggcgatagtccagtagccgaaagcatcac 109956 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109957 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 110016 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110017 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 110076 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 110077 gggtgaaaagaacccccgtcggggagtgaaatagaacatgaaaccg---taagctcccaa 110133 Query: 494 gcagtgggagg-ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 552 ||||||||||| | || | |||||||||||||||||||||||||||||||||||||| Sbjct: 110134 gcagtgggaggagcccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgact 110191 Query: 553 cataggcagtgg 564 |||||||||||| Sbjct: 110192 cataggcagtgg 110203
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 781 bits (394), Expect = 0.0 Identities = 518/554 (93%), Gaps = 8/554 (1%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 139647 gacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaa 139588 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 139587 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 139529 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139528 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 139470 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 139469 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 139410 Query: 254 aggcgaagcggtt-gagtgccgcaccctanatggctaaagtccagtagccgaaagcatca 312 ||||||||| || || ||| |||||||| |||| | |||||||||||||||||||||| Sbjct: 139409 aggcgaagcagtgcgaatgctgcaccctagatggtgagagtccagtagccgaaagcatca 139350 Query: 313 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 372 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139349 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 139290 Query: 373 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 432 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 139289 gaccaccttgcaaggctaaatactcctgggtgacccatagcgaagtagtaccgtgaggga 139230 Query: 433 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 492 | ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||| Sbjct: 139229 agggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccca 139173 Query: 493 agcagtgggagggga--aagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 550 |||||||||||| || | | |||||||||||||||||||||||||||||||||||| Sbjct: 139172 agcagtgggaggagactactaggactctgaccgcgtgcctgttgaagaatgagccggcga 139113 Query: 551 ctcataggcagtgg 564 |||||||||||||| Sbjct: 139112 ctcataggcagtgg 139099 Score = 781 bits (394), Expect = 0.0 Identities = 518/554 (93%), Gaps = 8/554 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 109652 gacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaa 109711 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 109712 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 109770 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109771 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 109829 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 109830 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 109889 Query: 254 aggcgaagcggtt-gagtgccgcaccctanatggctaaagtccagtagccgaaagcatca 312 ||||||||| || || ||| |||||||| |||| | |||||||||||||||||||||| Sbjct: 109890 aggcgaagcagtgcgaatgctgcaccctagatggtgagagtccagtagccgaaagcatca 109949 Query: 313 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 372 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109950 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 110009 Query: 373 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 432 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 110010 gaccaccttgcaaggctaaatactcctgggtgacccatagcgaagtagtaccgtgaggga 110069 Query: 433 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 492 | ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||| Sbjct: 110070 agggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccca 110126 Query: 493 agcagtgggagggga--aagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 550 |||||||||||| || | | |||||||||||||||||||||||||||||||||||| Sbjct: 110127 agcagtgggaggagactactaggactctgaccgcgtgcctgttgaagaatgagccggcga 110186 Query: 551 ctcataggcagtgg 564 |||||||||||||| Sbjct: 110187 ctcataggcagtgg 110200
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 773 bits (390), Expect = 0.0 Identities = 468/491 (95%), Gaps = 5/491 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 46318 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaa 46377 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 46378 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 46436 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46437 tcttactagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 46495 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 46496 gggaacagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 46555 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||| |||| |||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 46556 aggcgaagcggtggagtaccgcaccctagatggctagagtccagtagccgaaagcatcac 46615 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46616 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 46675 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46676 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 46735 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||| ||| Sbjct: 46736 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctctcaa 46792 Query: 494 gcagtgggagg 504 ||||||||||| Sbjct: 46793 gcagtgggagg 46803 Score = 99.6 bits (50), Expect = 1e-17 Identities = 50/50 (100%) Strand = Plus / Plus Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 564 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46818 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 46867
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 773 bits (390), Expect = 0.0 Identities = 468/491 (95%), Gaps = 5/491 (1%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 130469 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaa 130410 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| |||| | ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 130409 cctttcgaactac-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 130351 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130350 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 130292 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 130291 gggagcagcctaaaccgtgaaaacggggttgtgggagagctatacaagcgtcgtgctgct 130232 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||| ||||||||||||||| ||||| | ||||||||||||||||||||||| Sbjct: 130231 aggcgaagcggtggagtgccgcaccctagatggcgagagtccagtagccgaaagcatcac 130172 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130171 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 130112 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 130111 accaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaa 130052 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 130051 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 129995 Query: 494 gcagtgggagg 504 ||||||||||| Sbjct: 129994 gcagtgggagg 129984 Score = 773 bits (390), Expect = 0.0 Identities = 468/491 (95%), Gaps = 5/491 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 101987 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaa 102046 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| |||| | ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 102047 cctttcgaactac-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 102105 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102106 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 102164 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 102165 gggagcagcctaaaccgtgaaaacggggttgtgggagagctatacaagcgtcgtgctgct 102224 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||| ||||||||||||||| ||||| | ||||||||||||||||||||||| Sbjct: 102225 aggcgaagcggtggagtgccgcaccctagatggcgagagtccagtagccgaaagcatcac 102284 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102285 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 102344 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 102345 accaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaa 102404 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 102405 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 102461 Query: 494 gcagtgggagg 504 ||||||||||| Sbjct: 102462 gcagtgggagg 102472 Score = 91.7 bits (46), Expect = 2e-15 Identities = 49/50 (98%) Strand = Plus / Minus Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 564 |||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 129969 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtgg 129920 Score = 91.7 bits (46), Expect = 2e-15 Identities = 49/50 (98%) Strand = Plus / Plus Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 564 |||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 102487 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtgg 102536
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 771 bits (389), Expect = 0.0 Identities = 518/553 (93%), Gaps = 10/553 (1%) Strand = Plus / Plus Query: 15 acgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaac 74 |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| Sbjct: 1833 acgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaac 1892 Query: 75 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 134 |||| |||||| ||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 1893 ctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaccat 1951 Query: 135 cttagtagccagtaggaaaagaaagcaaaag-cgattcccgtagtagcggcgagcgaaat 193 |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1952 cttagtagccag-aggaaaagaaagcaaaaggcgattcccgtagtagcggcgagcgaaat 2010 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt-gtgctgc 252 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 2011 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcggccgtgctgc 2070 Query: 253 taggcgaagcggtt-gagtgccgcaccctanatggctaaagtccagtagccgaaagcatc 311 |||||||||| | || ||| |||||||| ||||| ||||||||||||||||||||||| Sbjct: 2071 taggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatc 2130 Query: 312 actagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2131 actagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 2190 Query: 372 ggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2191 ggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggg 2250 Query: 432 aaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 491 || ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||| Sbjct: 2251 aagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccc 2307 Query: 492 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 551 ||||||||||||| | || | ||||||||||||||||||||||||||||||||||||| Sbjct: 2308 aagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgac 2365 Query: 552 tcataggcagtgg 564 ||||||||||||| Sbjct: 2366 tcataggcagtgg 2378
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 763 bits (385), Expect = 0.0 Identities = 514/553 (92%), Gaps = 7/553 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| || Sbjct: 86328 gacgaaatgcttcggggagttgaaaatgagcatagatccggagattcccgaataggttaa 86387 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 || ||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 86388 cccttttaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 86446 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||| Sbjct: 86447 tcttagtagccag-aggaatagaaagcaaaagcgattcccgtagtagtggcgagcgaaat 86505 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagc--aatacaagcgttgtgctg 251 |||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||| Sbjct: 86506 gggagcagcctaaaccgtgaaaacggggttgtgggagagcccaatataagctctgtgctg 86565 Query: 252 ctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatc 311 ||||||||||||||||||| | |||||||| |||| | ||||||||||||||||||||| Sbjct: 86566 ctaggcgaagcggttgagtcctgcaccctagatggtgagagtccagtagccgaaagcatc 86625 Query: 312 actagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 371 | | ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86626 attggcttacgctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 86685 Query: 372 ggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86686 ggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggg 86745 Query: 432 aaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 491 |||||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||| Sbjct: 86746 aaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccc 86802 Query: 492 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 551 ||||||||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct: 86803 aagcagtgggaggaaaattagatctctgaccgcgtgcctgttgaagaatgagccggcgac 86862 Query: 552 tcataggcagtgg 564 | ||||||||||| Sbjct: 86863 ttataggcagtgg 86875
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 763 bits (385), Expect = 0.0 Identities = 514/552 (93%), Gaps = 9/552 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||| Sbjct: 562 gacgaaatgcttcggggagttgaaaataagccgagatccggagattcccgaatagggcaa 621 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| |||| | ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 622 cctttcgaacttc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 680 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 681 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 739 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 740 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 799 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 ||||||| | || |||||| | |||||| |||| ||||||||||||||||||||||||| Sbjct: 800 aggcgaatctgtggagtgcggtaccctagatggtgaaagtccagtagccgaaagcatcac 859 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 860 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 919 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagta-ccgtgaggga 432 |||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||| Sbjct: 920 accaccttgcaaggctaaatactcctgggtgaccgatagccaaatagtacccgtgaggga 979 Query: 433 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 492 ||||||||||||||||||| ||| ||||||||||||| |||||||| | ||||| || Sbjct: 980 aaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctctca 1036 Query: 493 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 552 |||||||||||| || || |||||||||||||||||||||||||||||||||||||| Sbjct: 1037 agcagtgggaggagacag---gctctgaccgcgtgcctgttgaagaatgagccggcgact 1093 Query: 553 cataggcagtgg 564 |||||||||||| Sbjct: 1094 cataggcagtgg 1105
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 763 bits (385), Expect = 0.0 Identities = 514/553 (92%), Gaps = 7/553 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| || Sbjct: 88414 gacgaaatgcttcggggagttgaaaattagcatagatccggagattcccgaataggttaa 88473 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||| ||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 88474 cctttttcactgc-tgctgaatccatgggcaggcaagagacaacctggtgaactgaaaca 88532 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 88533 tcttagtagccag-aggaatagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 88591 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagca--atacaagcgttgtgctg 251 ||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||| Sbjct: 88592 gggagcagcctaaaccgtgaaaacggggttgtgggagagcacaatataagctctgtgctg 88651 Query: 252 ctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatc 311 ||||||||||||||||||| | |||||||| |||| | ||||||||||||||||||||| Sbjct: 88652 ctaggcgaagcggttgagtcctgcaccctagatggtgagagtccagtagccgaaagcatc 88711 Query: 312 actagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 371 | | ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88712 attggcttacgctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 88771 Query: 372 ggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88772 ggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggg 88831 Query: 432 aaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 491 |||||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||| Sbjct: 88832 aaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccc 88888 Query: 492 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 551 ||||||||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct: 88889 aagcagtgggaggaaaattagatctctgaccgcgtgcctgttgaagaatgagccggcgac 88948 Query: 552 tcataggcagtgg 564 | ||||||||||| Sbjct: 88949 ttataggcagtgg 88961
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 761 bits (384), Expect = 0.0 Identities = 514/552 (93%), Gaps = 8/552 (1%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||| Sbjct: 142813 gacgaaatgcttcggggagttgaaaataagcgcagatccggagattcccgaatgggtcaa 142754 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 142753 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 142695 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142694 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 142636 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 142635 gggagcagcctaaaccgtgaaaacggggttgtgggagagtcatacaagcgtcgtgctgct 142576 Query: 254 aggcgaagcggttg-agtgccgcaccctanatggctaaagtccagtagccgaaagcatca 312 ||||||||| | || ||||| |||||||| |||| | |||||||||||||||||||||| Sbjct: 142575 aggcgaagcagctggagtgctgcaccctagatggtgagagtccagtagccgaaagcatca 142516 Query: 313 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 372 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142515 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 142456 Query: 373 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 432 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142455 gaccaccttgtaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 142396 Query: 433 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 492 | ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||| Sbjct: 142395 agggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taggctccca 142339 Query: 493 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 552 |||||||||||| | || | |||||||||||||||||||||||||||||||||||||| Sbjct: 142338 agcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgact 142281 Query: 553 cataggcagtgg 564 |||||||||||| Sbjct: 142280 cataggcagtgg 142269 Score = 761 bits (384), Expect = 0.0 Identities = 514/552 (93%), Gaps = 8/552 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||| Sbjct: 110515 gacgaaatgcttcggggagttgaaaataagcgcagatccggagattcccgaatgggtcaa 110574 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 110575 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 110633 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110634 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 110692 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 110693 gggagcagcctaaaccgtgaaaacggggttgtgggagagtcatacaagcgtcgtgctgct 110752 Query: 254 aggcgaagcggttg-agtgccgcaccctanatggctaaagtccagtagccgaaagcatca 312 ||||||||| | || ||||| |||||||| |||| | |||||||||||||||||||||| Sbjct: 110753 aggcgaagcagctggagtgctgcaccctagatggtgagagtccagtagccgaaagcatca 110812 Query: 313 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 372 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110813 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 110872 Query: 373 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 432 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110873 gaccaccttgtaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 110932 Query: 433 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 492 | ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||| Sbjct: 110933 agggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taggctccca 110989 Query: 493 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 552 |||||||||||| | || | |||||||||||||||||||||||||||||||||||||| Sbjct: 110990 agcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgact 111047 Query: 553 cataggcagtgg 564 |||||||||||| Sbjct: 111048 cataggcagtgg 111059
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 759 bits (383), Expect = 0.0 Identities = 512/551 (92%), Gaps = 7/551 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 4297 gacgaaatgcttcggggagttgaaaataagcatagatccgaggattcccgaataggtcaa 4356 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| |||||| |||||||| || |||||||||||||||||||||||||||||||||| Sbjct: 4357 cctttcgaactgc-tgctgaattcacgagcaggcaagagacaacctggcgaactgaaaca 4415 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4416 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 4474 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 4475 gggaacagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgttgct 4534 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 ||||||||| | || || |||||||| |||| ||||||||||||||||||||||||| Sbjct: 4535 aggcgaagcaatcgaatgttgcaccctagatggtgaaagtccagtagccgaaagcatcac 4594 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4595 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 4654 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 4655 accaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaa 4714 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 4715 aggtgaaaagaacccctgtcggggagtgaaatagaacatgaaaccg---taagctcccaa 4771 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 ||||||||||| | | | ||||||||||||||||||||||||||||||||||||||| Sbjct: 4772 gcagtgggaggagctgggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 4829 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 4830 ataggcagtgg 4840
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 759 bits (383), Expect = 0.0 Identities = 512/551 (92%), Gaps = 7/551 (1%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 23628 gacgaaatgcttcggggagttgaaaataagcatagatccgaggattcccgaataggtcaa 23569 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| |||||| |||||||| || |||||||||||||||||||||||||||||||||| Sbjct: 23568 cctttcgaactgc-tgctgaattcacgagcaggcaagagacaacctggcgaactgaaaca 23510 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23509 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 23451 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 23450 gggaacagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgttgct 23391 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 ||||||||| | || || |||||||| |||| ||||||||||||||||||||||||| Sbjct: 23390 aggcgaagcaatcgaatgttgcaccctagatggtgaaagtccagtagccgaaagcatcac 23331 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23330 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 23271 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 23270 accaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaa 23211 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 23210 aggtgaaaagaacccctgtcggggagtgaaatagaacatgaaaccg---taagctcccaa 23154 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 ||||||||||| | | | ||||||||||||||||||||||||||||||||||||||| Sbjct: 23153 gcagtgggaggagctgggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 23096 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 23095 ataggcagtgg 23085
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 759 bits (383), Expect = 0.0 Identities = 513/551 (93%), Gaps = 8/551 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 4566 gacgaaatgcttcggggagttgaaaataagcatagatccgaggattcccgaataggtcaa 4625 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| |||||| |||||||| || |||||||||||||||||||||||||||||||||| Sbjct: 4626 cctttcgaactgc-tgctgaattcacgagcaggcaagagacaacctggcgaactgaaaca 4684 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4685 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 4743 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 4744 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 4803 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 ||||||||| || || || |||||||| |||| ||||||||||||||||||||||||| Sbjct: 4804 aggcgaagcagtcgaatgttgcaccctagatggtgaaagtccagtagccgaaagcatcac 4863 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| Sbjct: 4864 tagcttatgctctgacccgagtaacatggggcacgtgaaatcccgtgtgaatcagcaagg 4923 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 4924 accaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaa 4983 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||| | ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 4984 aggtgaaaagaacccctggcggggagtgaaatagaacatgaaaccg---taagctcccaa 5040 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||||||| | | | ||||||||||||||||||||||||||||||||||||||| Sbjct: 5041 -cagtgggaggagctgggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 5097 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 5098 ataggcagtgg 5108
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 759 bits (383), Expect = 0.0 Identities = 513/551 (93%), Gaps = 8/551 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 4566 gacgaaatgcttcggggagttgaaaataagcatagatccgaggattcccgaataggtcaa 4625 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| |||||| |||||||| || |||||||||||||||||||||||||||||||||| Sbjct: 4626 cctttcgaactgc-tgctgaattcacgagcaggcaagagacaacctggcgaactgaaaca 4684 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4685 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 4743 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 4744 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 4803 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 ||||||||| || || || |||||||| |||| ||||||||||||||||||||||||| Sbjct: 4804 aggcgaagcagtcgaatgttgcaccctagatggtgaaagtccagtagccgaaagcatcac 4863 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| Sbjct: 4864 tagcttatgctctgacccgagtaacatggggcacgtgaaatcccgtgtgaatcagcaagg 4923 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 4924 accaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaa 4983 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||| | ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 4984 aggtgaaaagaacccctggcggggagtgaaatagaacatgaaaccg---taagctcccaa 5040 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||||||| | | | ||||||||||||||||||||||||||||||||||||||| Sbjct: 5041 -cagtgggaggagctgggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 5097 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 5098 ataggcagtgg 5108
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 757 bits (382), Expect = 0.0 Identities = 466/491 (94%), Gaps = 5/491 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 74 gacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaa 133 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 134 cctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 192 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 193 tcttagtaaccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 251 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 252 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 311 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||| |||||| |||||||| ||||| | ||||||||||||||||||||||| Sbjct: 312 aggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatcac 371 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 372 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 431 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 432 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtactaccgtgagggaa 491 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 ||||||||||||||||| ||| ||||||||| ||| |||||||| | ||||||||| Sbjct: 492 gggtgaaaagaacccccatcggggagtgaaataaaacatgaaaccg---taagctcccaa 548 Query: 494 gcagtgggagg 504 ||||||||||| Sbjct: 549 gcagtgggagg 559
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 757 bits (382), Expect = 0.0 Identities = 466/491 (94%), Gaps = 5/491 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 74 gacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaa 133 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 134 cctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 192 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 193 tcttagtaaccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 251 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 252 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 311 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||| |||||| |||||||| ||||| | ||||||||||||||||||||||| Sbjct: 312 aggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatcac 371 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 372 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 431 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 432 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtactaccgtgagggaa 491 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 ||||||||||||||||| || ||||||||||||| |||||||| | ||||||||| Sbjct: 492 gggtgaaaagaacccccatccgggagtgaaatagaacatgaaaccg---taagctcccaa 548 Query: 494 gcagtgggagg 504 ||||||||||| Sbjct: 549 gcagtgggagg 559 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 564 |||||| ||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaagaattaaccggcgactcataggcagtgg 630
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 749 bits (378), Expect = 0.0 Identities = 465/491 (94%), Gaps = 5/491 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 74 gacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaa 133 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 134 cctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 192 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 193 tcttagtaaccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 251 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 252 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 311 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||| |||||| |||||||| ||||| | ||||||||||||||||||||| | Sbjct: 312 aggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatccc 371 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 372 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 431 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 432 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtaataccgtgagggaa 491 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 ||||||||||||||||| || ||||||||||||| |||||||| | ||||||||| Sbjct: 492 gggtgaaaagaacccccatccgggagtgaaatagaacatgaaaccg---taagctcccaa 548 Query: 494 gcagtgggagg 504 ||||||||||| Sbjct: 549 gcagtgggagg 559 Score = 44.1 bits (22), Expect = 0.49 Identities = 44/50 (88%), Gaps = 1/50 (2%) Strand = Plus / Plus Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 564 |||||| ||||||||||||||| ||||| || |||| ||||| ||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaaaaatga-cccgcgaatcataagcagtgg 629
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 749 bits (378), Expect = 0.0 Identities = 465/491 (94%), Gaps = 5/491 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 74 gacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaa 133 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 134 cctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 192 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 193 tcttagtaaccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 251 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 252 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 311 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||| |||||| |||||||| ||||| | ||||||||||||||||||||| | Sbjct: 312 aggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatccc 371 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 372 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 431 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 432 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtaataccgtgagggaa 491 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 ||||||||||||||||| ||| ||||||||| ||| |||||||| | ||||||||| Sbjct: 492 gggtgaaaagaacccccatcggggagtgaaataaaacatgaaaccg---taagctcccaa 548 Query: 494 gcagtgggagg 504 ||||||||||| Sbjct: 549 gcagtgggagg 559 Score = 52.0 bits (26), Expect = 0.002 Identities = 45/50 (90%), Gaps = 1/50 (2%) Strand = Plus / Plus Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 564 |||||| |||||||||||| || |||||||| |||||||||||| ||||| Sbjct: 581 ctctgaacgcgtgcctgtttaaaaatgagcc-gcgactcataggaagtgg 629
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 749 bits (378), Expect = 0.0 Identities = 465/491 (94%), Gaps = 5/491 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 74 gacgaaatgcttcggggggttgaaaataagcgtagatccggagattcccgaataggtcaa 133 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 134 cctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 192 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 193 tcttagtaaccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 251 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 252 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 311 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||| |||||| |||||||| ||||| | ||||||||||||||||||||| | Sbjct: 312 aggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatccc 371 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 372 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 431 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 432 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtaataccgtgagggaa 491 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 492 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 548 Query: 494 gcagtgggagg 504 ||||||||||| Sbjct: 549 gcagtgggagg 559 Score = 67.9 bits (34), Expect = 3e-08 Identities = 47/50 (94%), Gaps = 1/50 (2%) Strand = Plus / Plus Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 564 |||||| ||||||||||||||| ||||||||||||||||||||| ||||| Sbjct: 581 ctctgaacgcgtgcctgttgaa-aatgagccggcgactcataggaagtgg 629
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 745 bits (376), Expect = 0.0 Identities = 510/551 (92%), Gaps = 8/551 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||| Sbjct: 74 gacgaaatgcttcggggagttgaaaataagccgagatccggagattcccgaatagggcaa 133 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| |||| | ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 134 cctttcgaacttc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 192 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 193 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 251 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 252 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 311 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 ||||||| | || |||||| | |||||| |||| ||||||||||||||||||||||||| Sbjct: 312 aggcgaatctgtggagtgcggtaccctagatggtgaaagtccagtagccgaaagcatcac 371 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 372 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 431 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 432 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtaataccgtgagggaa 491 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 ||||||||||||||||| ||| ||||||||| ||| |||||||| | ||||| ||| Sbjct: 492 gggtgaaaagaacccccatcggggagtgaaataaaacatgaaaccg---taagctctcaa 548 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 ||||||||||| || || |||||| ||||||||||||||| |||||||||||||||| Sbjct: 549 gcagtgggaggagacag---gctctgaacgcgtgcctgttgaaaaatgagccggcgactc 605 Query: 554 ataggcagtgg 564 ||| ||||||| Sbjct: 606 atacgcagtgg 616
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 743 bits (375), Expect = 0.0 Identities = 515/553 (93%), Gaps = 13/553 (2%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 166 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaa 225 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 226 cctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 284 Query: 134 tcttagt-agccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 192 ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 285 tcttagtgagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 343 Query: 193 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 252 |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| Sbjct: 344 tgggagcagcctaaaccgtgaaaacggg-ttgtgggagagcaatacaagcgtcgtgctgc 402 Query: 253 taggcgaag-cggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatc 311 ||||||||| || || ||| |||||||| ||||| ||||||||||||||||||||||| Sbjct: 403 taggcgaagacgcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatc 462 Query: 312 actagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 371 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 463 actagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcgacaa 522 Query: 372 ggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 523 ggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggg 582 Query: 432 aaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 491 || ||||||||||| ||||| ||| ||||||||||||| |||||||| | ||||||| Sbjct: 583 aagggtgaaaagaa-ccccatcggggagtgaaatagaacatgaaaccg---taagctccc 638 Query: 492 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 551 ||||||||||||| | | ||||||||||||||||||||||||||||||||||||| Sbjct: 639 aagcagtgggaggcca----gggctctgaccgcgtgcctgttgaagaatgagccggcgac 694 Query: 552 tcataggcagtgg 564 ||||||||||||| Sbjct: 695 tcataggcagtgg 707
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 739 bits (373), Expect = 0.0 Identities = 509/549 (92%), Gaps = 8/549 (1%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 52620 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaa 52561 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| |||||| ||||||||||||| |||| ||||||| ||||||||||||||||||| Sbjct: 52560 ccttttgaactgc-tgctgaatccatgggcagacaagagataacctggcgaactgaaaca 52502 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 52501 tcttagtagccag-aggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaat 52443 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||| |||||||||||||||||||||||||| ||| || |||||||| Sbjct: 52442 gggagcagcctaaaccgcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgct 52383 Query: 254 aggcgaa-gcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatca 312 ||||||| | | |||| ||| |||||||| ||||| |||||||||||||||||||||||| Sbjct: 52382 aggcgaacgagcttgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 52323 Query: 313 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 372 |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 52322 ttagcttgtgctctgacccgagtagcatgggacacgtggaatcccgtgtgaatcagcaag 52263 Query: 373 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 432 ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 52262 gaccaccttgcaaggctaaatactcctgggtaaccgatagttaagtagtaccgtgaggga 52203 Query: 433 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 492 | ||||||||||||||||| |||| ||||||||||||| |||||||| | |||||||| Sbjct: 52202 agggtgaaaagaacccccattggggagtgaaatagaacatgaaaccg---taagctccca 52146 Query: 493 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 552 |||||||||||| | || | |||||||||||||||||||||||||||||||||||||| Sbjct: 52145 agcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgact 52088 Query: 553 cataggcag 561 ||||||||| Sbjct: 52087 cataggcag 52079 Score = 739 bits (373), Expect = 0.0 Identities = 509/549 (92%), Gaps = 8/549 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 37208 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaa 37267 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| |||||| ||||||||||||| |||| ||||||| ||||||||||||||||||| Sbjct: 37268 ccttttgaactgc-tgctgaatccatgggcagacaagagataacctggcgaactgaaaca 37326 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 37327 tcttagtagccag-aggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaat 37385 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||| |||||||||||||||||||||||||| ||| || |||||||| Sbjct: 37386 gggagcagcctaaaccgcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgct 37445 Query: 254 aggcgaa-gcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatca 312 ||||||| | | |||| ||| |||||||| ||||| |||||||||||||||||||||||| Sbjct: 37446 aggcgaacgagcttgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 37505 Query: 313 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 372 |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 37506 ttagcttgtgctctgacccgagtagcatgggacacgtggaatcccgtgtgaatcagcaag 37565 Query: 373 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 432 ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 37566 gaccaccttgcaaggctaaatactcctgggtaaccgatagttaagtagtaccgtgaggga 37625 Query: 433 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 492 | ||||||||||||||||| |||| ||||||||||||| |||||||| | |||||||| Sbjct: 37626 agggtgaaaagaacccccattggggagtgaaatagaacatgaaaccg---taagctccca 37682 Query: 493 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 552 |||||||||||| | || | |||||||||||||||||||||||||||||||||||||| Sbjct: 37683 agcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgact 37740 Query: 553 cataggcag 561 ||||||||| Sbjct: 37741 cataggcag 37749
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 739 bits (373), Expect = 0.0 Identities = 509/549 (92%), Gaps = 8/549 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 4136 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaa 4195 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| |||||| ||||||||||||| |||| ||||||| ||||||||||||||||||| Sbjct: 4196 ccttttgaactgc-tgctgaatccatgggcagacaagagataacctggcgaactgaaaca 4254 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 4255 tcttagtagccag-aggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaat 4313 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||| |||||||||||||||||||||||||| ||| || |||||||| Sbjct: 4314 gggagcagcctaaaccgcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgct 4373 Query: 254 aggcgaa-gcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatca 312 ||||||| | | |||| ||| |||||||| ||||| |||||||||||||||||||||||| Sbjct: 4374 aggcgaacgagcttgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 4433 Query: 313 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 372 |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 4434 ttagcttgtgctctgacccgagtagcatgggacacgtggaatcccgtgtgaatcagcaag 4493 Query: 373 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 432 ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 4494 gaccaccttgcaaggctaaatactcctgggtaaccgatagttaagtagtaccgtgaggga 4553 Query: 433 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 492 | ||||||||||||||||| |||| ||||||||||||| |||||||| | |||||||| Sbjct: 4554 agggtgaaaagaacccccattggggagtgaaatagaacatgaaaccg---taagctccca 4610 Query: 493 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 552 |||||||||||| | || | |||||||||||||||||||||||||||||||||||||| Sbjct: 4611 agcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgact 4668 Query: 553 cataggcag 561 ||||||||| Sbjct: 4669 cataggcag 4677
>gb|AF497435.1| Gossypium hirsutum clone T1F05 unknown chloroplast sequence Length = 640 Score = 735 bits (371), Expect = 0.0 Identities = 494/530 (93%), Gaps = 8/530 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 115 gacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaa 174 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| |||||| ||||||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 175 cctttcgaactgc-tgctgaatccatgggcagacaagagacaacctggcgaactgaaaca 233 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 234 tcttagtagccgg-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 292 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| Sbjct: 293 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgct 352 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||| ||||||| |||||| ||||| | ||||||||||||||||||||||| Sbjct: 353 aggcgaagcggtgaagtgccgaaccctagatggcgatagtccagtagccgaaagcatcac 412 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 413 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 472 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 473 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 532 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 533 gggtgaaaagaacccccgtcggggagtgaaatagaacatgaaaccg---taagctcccaa 589 Query: 494 gcagtgggagg-ggaaagtgatctctgaccgcgtgcctgttgaagaatga 542 |||| |||||| | || | |||||||||||||||||||||||||||| Sbjct: 590 gcagngggaggagcccaggg--ctctgaccgcgtgcctgttgaagaatga 637
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 735 bits (371), Expect = 0.0 Identities = 515/555 (92%), Gaps = 10/555 (1%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaa-ataggtca 72 ||||||||||||||||||||||||||||||| ||||||||| ||||||| | |||||||| Sbjct: 131805 gacgaaatgcttcggggagttgaaaataagcgtagatccggggattcccgatataggtca 131746 Query: 73 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 132 |||||| |||||| ||||||||||| | |||||||||||||||||||| |||||||||| Sbjct: 131745 acctttcgaactgc-tgctgaatccacgggcaggcaagagacaacctggtgaactgaaac 131687 Query: 133 atcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131686 atcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 131628 Query: 193 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 252 ||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||| Sbjct: 131627 tgggagcagcctaaaccgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgc 131568 Query: 253 taggcgaagcggttgag--tgccgcaccctanatggctaaagtccagtagccgaaagcat 310 |||||||||| | ||| ||| |||||||| ||||| | |||||||||||||||||||| Sbjct: 131567 taggcgaagcagcagagaatgctgcaccctagatggcgagagtccagtagccgaaagcat 131508 Query: 311 cactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagca 370 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131507 cactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagca 131448 Query: 371 aggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagg 430 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 131447 aggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagg 131388 Query: 431 gaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcc 490 ||| ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||| Sbjct: 131387 gaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcc 131331 Query: 491 caagcagtgggagg-ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 549 |||||||||||||| || | || ||||||||||||||||||||||||||||||||||| Sbjct: 131330 caagcagtgggaggaggctcggga-ctctgaccgcgtgcctgttgaagaatgagccggcg 131272 Query: 550 actcataggcagtgg 564 ||||||||||||||| Sbjct: 131271 actcataggcagtgg 131257 Score = 735 bits (371), Expect = 0.0 Identities = 515/555 (92%), Gaps = 10/555 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaa-ataggtca 72 ||||||||||||||||||||||||||||||| ||||||||| ||||||| | |||||||| Sbjct: 103589 gacgaaatgcttcggggagttgaaaataagcgtagatccggggattcccgatataggtca 103648 Query: 73 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 132 |||||| |||||| ||||||||||| | |||||||||||||||||||| |||||||||| Sbjct: 103649 acctttcgaactgc-tgctgaatccacgggcaggcaagagacaacctggtgaactgaaac 103707 Query: 133 atcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103708 atcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 103766 Query: 193 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 252 ||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||| Sbjct: 103767 tgggagcagcctaaaccgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgc 103826 Query: 253 taggcgaagcggttgag--tgccgcaccctanatggctaaagtccagtagccgaaagcat 310 |||||||||| | ||| ||| |||||||| ||||| | |||||||||||||||||||| Sbjct: 103827 taggcgaagcagcagagaatgctgcaccctagatggcgagagtccagtagccgaaagcat 103886 Query: 311 cactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagca 370 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103887 cactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagca 103946 Query: 371 aggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagg 430 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 103947 aggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagg 104006 Query: 431 gaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcc 490 ||| ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||| Sbjct: 104007 gaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcc 104063 Query: 491 caagcagtgggagg-ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 549 |||||||||||||| || | || ||||||||||||||||||||||||||||||||||| Sbjct: 104064 caagcagtgggaggaggctcggga-ctctgaccgcgtgcctgttgaagaatgagccggcg 104122 Query: 550 actcataggcagtgg 564 ||||||||||||||| Sbjct: 104123 actcataggcagtgg 104137
>emb|AJ538655.1|NTA538655 Nicotiana tabacum cDNA-AFLP-fragment BC34-M2-001 Length = 512 Score = 733 bits (370), Expect = 0.0 Identities = 482/514 (93%), Gaps = 8/514 (1%) Strand = Plus / Minus Query: 52 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 111 ||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 512 cggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 454 Query: 112 gacaacctggcgaactgaaacatcttagtagccagtaggaaaagaaagcaaaagcgattc 171 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 453 gacaacctggcgaactgaaacatcttagtagccag-aggaaaagaaagcaaaagcgattc 395 Query: 172 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 231 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 394 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 335 Query: 232 gcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctanatggctaa 290 ||||||||||||| ||||||||||||||||| | || ||| |||||||| ||||| || Sbjct: 334 gcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaa 275 Query: 291 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 350 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 274 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 215 Query: 351 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 410 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 214 gaatcccgtgtgaatcagcaaggaccgccttgcaaggctaaatactcctgggtgaccgat 155 Query: 411 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 470 ||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 154 agcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaac 95 Query: 471 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 530 |||||||| | |||||||||||||||||||| | || | |||||||||||||||| Sbjct: 94 atgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcct 40 Query: 531 gttgaagaatgagccggcgactcataggcagtgg 564 |||||||||||||||||||||||||||||||||| Sbjct: 39 gttgaagaatgagccggcgactcataggcagtgg 6
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 724 bits (365), Expect = 0.0 Identities = 511/557 (91%), Gaps = 11/557 (1%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||| || Sbjct: 128380 gacgaaatgcttcggggagctgaaaacaagcatagatccggagattcccgaataggttaa 128321 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| |||||| |||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 128320 ccttttgaactgc-tgctgaattcataggcaggcaagagacaacctggcgaactgaaaca 128262 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||| | Sbjct: 128261 tcttagtagccag-aggaaaggaaagcaaacgcgattcccgtagtagcggcgagcgaagt 128203 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagc------aatacaagcgttgt 247 ||||| ||||||||||||||||||||||||||||| |||| ||||||||| |||| Sbjct: 128202 gggagtagcctaaaccgtgaaaacggggttgtgggggagcgatacaaatacaagctttgt 128143 Query: 248 gctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaag 307 ||||||||||||||||||||||| |||||||||| ||||| | ||||||||||||||||| Sbjct: 128142 gctgctaggcgaagcggttgagtcccgcaccctagatggcaagagtccagtagccgaaag 128083 Query: 308 catcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatca 367 ||||||||||| | ||||| |||| ||||||||||||||||||||||||||||||||||| Sbjct: 128082 catcactagctcacgctctaacccaagtagcatggggcacgtggaatcccgtgtgaatca 128023 Query: 368 gcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtg 427 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 128022 gcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagcagtaccgtg 127963 Query: 428 agggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagc 487 |||||| ||||||||||||||||| ||| ||||||||||||| |||||||| | ||| Sbjct: 127962 agggaagggtgaaaagaacccccataggggagtgaaatagaacatgaaaccg---taagc 127906 Query: 488 tcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccgg 547 ||||||||||||||||| ||| ||||||||||||| |||||||||| ||||||||||| Sbjct: 127905 tcccaagcagtgggaggagaattggatctctgaccgcatgcctgttgaggaatgagccgg 127846 Query: 548 cgactcataggcagtgg 564 ||||||||||||||||| Sbjct: 127845 cgactcataggcagtgg 127829 Score = 724 bits (365), Expect = 0.0 Identities = 511/557 (91%), Gaps = 11/557 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||| || Sbjct: 95067 gacgaaatgcttcggggagctgaaaacaagcatagatccggagattcccgaataggttaa 95126 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| |||||| |||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 95127 ccttttgaactgc-tgctgaattcataggcaggcaagagacaacctggcgaactgaaaca 95185 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||| | Sbjct: 95186 tcttagtagccag-aggaaaggaaagcaaacgcgattcccgtagtagcggcgagcgaagt 95244 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagc------aatacaagcgttgt 247 ||||| ||||||||||||||||||||||||||||| |||| ||||||||| |||| Sbjct: 95245 gggagtagcctaaaccgtgaaaacggggttgtgggggagcgatacaaatacaagctttgt 95304 Query: 248 gctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaag 307 ||||||||||||||||||||||| |||||||||| ||||| | ||||||||||||||||| Sbjct: 95305 gctgctaggcgaagcggttgagtcccgcaccctagatggcaagagtccagtagccgaaag 95364 Query: 308 catcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatca 367 ||||||||||| | ||||| |||| ||||||||||||||||||||||||||||||||||| Sbjct: 95365 catcactagctcacgctctaacccaagtagcatggggcacgtggaatcccgtgtgaatca 95424 Query: 368 gcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtg 427 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 95425 gcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagcagtaccgtg 95484 Query: 428 agggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagc 487 |||||| ||||||||||||||||| ||| ||||||||||||| |||||||| | ||| Sbjct: 95485 agggaagggtgaaaagaacccccataggggagtgaaatagaacatgaaaccg---taagc 95541 Query: 488 tcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccgg 547 ||||||||||||||||| ||| ||||||||||||| |||||||||| ||||||||||| Sbjct: 95542 tcccaagcagtgggaggagaattggatctctgaccgcatgcctgttgaggaatgagccgg 95601 Query: 548 cgactcataggcagtgg 564 ||||||||||||||||| Sbjct: 95602 cgactcataggcagtgg 95618
>emb|AJ538560.1|NTA538560 Nicotiana tabacum cDNA-AFLP-fragment BC3-M22-001 Length = 501 Score = 720 bits (363), Expect = 0.0 Identities = 453/479 (94%), Gaps = 7/479 (1%) Strand = Plus / Plus Query: 87 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 146 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 76 Query: 147 taggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 206 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77 -aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 135 Query: 207 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 266 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 136 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcc 195 Query: 267 -gagtgccgcaccctanatggctaaagtccagtagccgaaagcatcactagcttatgctc 325 || ||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 196 cgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctc 255 Query: 326 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 256 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 315 Query: 386 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 445 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 316 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 375 Query: 446 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 505 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 376 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 432 Query: 506 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 564 | || | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 433 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 489
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 710 bits (358), Expect = 0.0 Identities = 506/551 (91%), Gaps = 6/551 (1%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||| || Sbjct: 116143 gacgaaatgcttcggggagctgaaaataagtatagatccggagattcccgaataggttaa 116084 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| ||||||| |||||||| ||| |||| ||||||||||||||||||||||||||| Sbjct: 116083 cctttgaaactgc-tgctgaattcataggcagacaagagacaacctggcgaactgaaaca 116025 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 116024 tcttagtagccag-aggaaaagaaagcaaaagcgattctcgtagtagcggcgagcgaaat 115966 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||| |||||||||||||||||||||| ||||||| |||| | | ||| |||||| |||| Sbjct: 115965 gggaacagcctaaaccgtgaaaacggg-ttgtgggggagctaaataagtgttgtgttgct 115907 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 ||||||||| ||||||| | |||||||| |||| ||||||||||| ||||||||| ||| Sbjct: 115906 aggcgaagcagttgagtcctgcaccctagatggtgaaagtccagtaaccgaaagcagcac 115847 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115846 tagcttaggctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 115787 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115786 accaccttgtaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 115727 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 115726 aggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 115670 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 115669 gcagtgggaggagaattgaatctctgaccgcgtgcctgttgaagaatgagccggcgactt 115610 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 115609 ataggcagtgg 115599 Score = 710 bits (358), Expect = 0.0 Identities = 506/551 (91%), Gaps = 6/551 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||| || Sbjct: 85977 gacgaaatgcttcggggagctgaaaataagtatagatccggagattcccgaataggttaa 86036 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| ||||||| |||||||| ||| |||| ||||||||||||||||||||||||||| Sbjct: 86037 cctttgaaactgc-tgctgaattcataggcagacaagagacaacctggcgaactgaaaca 86095 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 86096 tcttagtagccag-aggaaaagaaagcaaaagcgattctcgtagtagcggcgagcgaaat 86154 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||| |||||||||||||||||||||| ||||||| |||| | | ||| |||||| |||| Sbjct: 86155 gggaacagcctaaaccgtgaaaacggg-ttgtgggggagctaaataagtgttgtgttgct 86213 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 ||||||||| ||||||| | |||||||| |||| ||||||||||| ||||||||| ||| Sbjct: 86214 aggcgaagcagttgagtcctgcaccctagatggtgaaagtccagtaaccgaaagcagcac 86273 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86274 tagcttaggctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 86333 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86334 accaccttgtaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 86393 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 86394 aggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 86450 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 86451 gcagtgggaggagaattgaatctctgaccgcgtgcctgttgaagaatgagccggcgactt 86510 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 86511 ataggcagtgg 86521
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 702 bits (354), Expect = 0.0 Identities = 504/551 (91%), Gaps = 5/551 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||| || Sbjct: 67 gacgaaatgcttcggggagctgaaaataagcatggatccggagattcccgaataggttaa 126 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| |||||| |||||||| ||| |||| ||||||||||||||||||||||||||| Sbjct: 127 ccttttgaactgc-tgctgaattcataggcagacaagagacaacctggcgaactgaaaca 185 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 186 tcttagtagccag-aggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaat 244 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||| ||||||||||||||||||||||||||||| |||||| | |||||||| ||| Sbjct: 245 gggagtagcctaaaccgtgaaaacggggttgtgggggagcaaagtaggcgttgtgtcgct 304 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 ||||||||| ||||| | | ||||| || |||| | ||||||||||||||||||||||| Sbjct: 305 aggcgaagcagttgaatcctgcaccatagatggtgagagtccagtagccgaaagcatcac 364 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 365 tagtttatgctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 424 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 425 accaccttgtaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 484 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 485 aggtgaaaagaacccccataggggagtgaaatagaacatgaaaccg---taagctcccaa 541 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 542 gcagtgggaggagaatcgaatctctgaccgcgtgcctgttgaagaatgagccggcgactt 601 Query: 554 ataggcagtgg 564 ||||| ||||| Sbjct: 602 ataggtagtgg 612
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 698 bits (352), Expect = 0.0 Identities = 464/497 (93%), Gaps = 6/497 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||| Sbjct: 74 gacgaaatgcttcggggagttgaaaataagccgagatccggagattcccgaatagggcaa 133 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| |||| | ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 134 cctttcgaacttc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 192 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 193 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 251 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 252 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 311 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 ||||||| | || |||||| | |||||| |||| ||||||||||||||||||||||||| Sbjct: 312 aggcgaatctgtggagtgcggtaccctagatggtgaaagtccagtagccgaaagcatcac 371 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 372 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 431 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 432 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 491 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 ||||||||||| ||||| ||| ||||||||| ||| |||||||| | ||||| ||| Sbjct: 492 gggtgaaaagaa-ccccatcggggagtgaaataaaacatgaaaccg---taagctctcaa 547 Query: 494 gcagtgggaggggaaag 510 ||||||||||| ||||| Sbjct: 548 gcagtgggaggagaaag 564
>dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast genes for tRNA-Ile(GAU), tRNA-Ala(UGC), 23S rRNA, partial sequence Length = 2767 Score = 696 bits (351), Expect = 0.0 Identities = 505/552 (91%), Gaps = 6/552 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| || Sbjct: 2110 gacgaaatgcttcggggagctgaaaataagcatagatccggagattcccgaataggttaa 2169 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| |||||| |||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 2170 ccttttgaactgc-tgctgaattcataggcaggcaagagacaacctggcgaactgaaaca 2228 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 2229 tcttagtagccag-aggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaat 2287 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||| |||||||||||||||||||||||||||||||||||| | ||| ||||| |||| Sbjct: 2288 gggactagcctaaaccgtgaaaacggggttgtgggagagcaaaataagtgttgttttgct 2347 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 ||||||||| ||||||| | |||||||| |||| | |||||||||||||||||||| || Sbjct: 2348 aggcgaagcagttgagtcctgcaccctagatggtgagagtccagtagccgaaagcataac 2407 Query: 314 tag-cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 372 | || ||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2408 aacactcatgctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 2467 Query: 373 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 432 |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 2468 gaccaccttgtaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgaggga 2527 Query: 433 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 492 ||||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||| Sbjct: 2528 aaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccca 2584 Query: 493 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 552 |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2585 agcagtgggaggagaatcgaatctctgaccgcgtgcctgttgaagaatgagccggcgact 2644 Query: 553 cataggcagtgg 564 ||||| ||||| Sbjct: 2645 tataggtagtgg 2656
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 696 bits (351), Expect = 0.0 Identities = 505/552 (91%), Gaps = 6/552 (1%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| || Sbjct: 118083 gacgaaatgcttcggggagctgaaaataagcatagatccggagattcccgaataggttaa 118024 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| |||||| |||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 118023 ccttttgaactgc-tgctgaattcataggcaggcaagagacaacctggcgaactgaaaca 117965 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 117964 tcttagtagccag-aggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaat 117906 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||| |||||||||||||||||||||||||||||||||||| | ||| ||||| |||| Sbjct: 117905 gggactagcctaaaccgtgaaaacggggttgtgggagagcaaaataagtgttgttttgct 117846 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 ||||||||| ||||||| | |||||||| |||| | |||||||||||||||||||| || Sbjct: 117845 aggcgaagcagttgagtcctgcaccctagatggtgagagtccagtagccgaaagcataac 117786 Query: 314 tag-cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 372 | || ||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117785 aacactcatgctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 117726 Query: 373 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 432 |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 117725 gaccaccttgtaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgaggga 117666 Query: 433 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 492 ||||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||| Sbjct: 117665 aaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccca 117609 Query: 493 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 552 |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 117608 agcagtgggaggagaatcgaatctctgaccgcgtgcctgttgaagaatgagccggcgact 117549 Query: 553 cataggcagtgg 564 ||||| ||||| Sbjct: 117548 tataggtagtgg 117537 Score = 696 bits (351), Expect = 0.0 Identities = 505/552 (91%), Gaps = 6/552 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| || Sbjct: 90019 gacgaaatgcttcggggagctgaaaataagcatagatccggagattcccgaataggttaa 90078 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| |||||| |||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 90079 ccttttgaactgc-tgctgaattcataggcaggcaagagacaacctggcgaactgaaaca 90137 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 90138 tcttagtagccag-aggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaat 90196 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||| |||||||||||||||||||||||||||||||||||| | ||| ||||| |||| Sbjct: 90197 gggactagcctaaaccgtgaaaacggggttgtgggagagcaaaataagtgttgttttgct 90256 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 ||||||||| ||||||| | |||||||| |||| | |||||||||||||||||||| || Sbjct: 90257 aggcgaagcagttgagtcctgcaccctagatggtgagagtccagtagccgaaagcataac 90316 Query: 314 tag-cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 372 | || ||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90317 aacactcatgctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 90376 Query: 373 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 432 |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 90377 gaccaccttgtaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgaggga 90436 Query: 433 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 492 ||||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||| Sbjct: 90437 aaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccca 90493 Query: 493 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 552 |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 90494 agcagtgggaggagaatcgaatctctgaccgcgtgcctgttgaagaatgagccggcgact 90553 Query: 553 cataggcagtgg 564 ||||| ||||| Sbjct: 90554 tataggtagtgg 90565
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 694 bits (350), Expect = 0.0 Identities = 503/551 (91%), Gaps = 5/551 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||| || Sbjct: 3956 gacgaaatgcttcggggagctgaaaagaagcatagatccggagattcccgaataggttaa 4015 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| |||||| |||||||| || || | |||||||||||| ||||||||||||||| Sbjct: 4016 ccttttgaactgc-tgctgaattcacaagtaagcaagagacaacttggcgaactgaaaca 4074 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 4075 tcttagtagccag-aggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 4133 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 4134 gggagtagcctaaaccgtgaaaacggggttgtgggagagcaatataagcgttgtgctgct 4193 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 ||| ||||| ||||||| | |||||| | |||| | ||||||||||||||||||| ||| Sbjct: 4194 aggtgaagcagttgagttctgcaccccagatggtgagagtccagtagccgaaagcaccac 4253 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 | |||| || | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4254 tgtcttacactttaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 4313 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4314 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 4373 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||| ||| ||||||||||||| ||||| || | |||| |||| Sbjct: 4374 aggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagcttccaa 4430 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4431 gcagtgagaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgactt 4490 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 4491 ataggcagtgg 4501
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 694 bits (350), Expect = 0.0 Identities = 503/551 (91%), Gaps = 5/551 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||| || Sbjct: 50 gacgaaatgcttcggggagctgaaaataagtatagatccggagattcccgaataggttaa 109 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 110 ccttttaaactgc-tgctgaatccataggcgggcaagagacaacctggcgaactgaaaca 168 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||| | ||||| |||||||||||||||||| |||||||||||||||||||| Sbjct: 169 tcttagtagccgg-aggaagagaaagcaaaagcgattctcgtagtagcggcgagcgaaac 227 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||| |||| | | |||| |||| |||| Sbjct: 228 gggagcagcctaaaccgtgaaaacggggttgtgggggagctaaagaagcattgtattgct 287 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 ||||||||| ||||||| | |||||||| |||| | ||||||||| |||||||||| || Sbjct: 288 aggcgaagcagttgagtcctgcaccctagatggtgagagtccagtaaccgaaagcattac 347 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 348 aagcttgggctctaacccgagtaacatggggcacgtggaatcccgtgtgaatcagcaagg 407 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 408 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 467 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||| ||| ||||||||||||| |||||||| | |||| |||| Sbjct: 468 aggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagcttccaa 524 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 525 gcagtgggaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgactt 584 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 585 ataggcagtgg 595
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 694 bits (350), Expect = 0.0 Identities = 503/551 (91%), Gaps = 5/551 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||| || Sbjct: 66 gacgaaatgcttcggggagctgaaaagaagcatagatccggagattcccgaataggttaa 125 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| |||||| |||||||| || || | |||||||||||| ||||||||||||||| Sbjct: 126 ccttttgaactgc-tgctgaattcacaagtaagcaagagacaacttggcgaactgaaaca 184 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 185 tcttagtagccag-aggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 243 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 244 gggagtagcctaaaccgtgaaaacggggttgtgggagagcaatataagcgttgtgctgct 303 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 ||| ||||| ||||||| | |||||| | |||| | ||||||||||||||||||| ||| Sbjct: 304 aggtgaagcagttgagttctgcaccccagatggtgagagtccagtagccgaaagcaccac 363 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 | |||| || | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 tgtcttacactttaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 423 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 424 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 483 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||| ||| ||||||||||||| ||||| || | |||| |||| Sbjct: 484 aggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagcttccaa 540 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 541 gcagtgagaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgactt 600 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 601 ataggcagtgg 611
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 694 bits (350), Expect = 0.0 Identities = 503/551 (91%), Gaps = 5/551 (0%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||| || Sbjct: 151179 gacgaaatgcttcggggagctgaaaagaagcatagatccggagattcccgaataggttaa 151120 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| |||||| |||||||| || || | |||||||||||| ||||||||||||||| Sbjct: 151119 ccttttgaactgc-tgctgaattcacaagtaagcaagagacaacttggcgaactgaaaca 151061 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 151060 tcttagtagccag-aggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 151002 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 151001 gggagtagcctaaaccgtgaaaacggggttgtgggagagcaatataagcgttgtgctgct 150942 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 ||| ||||| ||||||| | |||||| | |||| | ||||||||||||||||||| ||| Sbjct: 150941 aggtgaagcagttgagttctgcaccccagatggtgagagtccagtagccgaaagcaccac 150882 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 | |||| || | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150881 tgtcttacactttaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 150822 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150821 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 150762 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||| ||| ||||||||||||| ||||| || | |||| |||| Sbjct: 150761 aggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagcttccaa 150705 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 150704 gcagtgagaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgactt 150645 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 150644 ataggcagtgg 150634 Score = 694 bits (350), Expect = 0.0 Identities = 503/551 (91%), Gaps = 5/551 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||| || Sbjct: 117487 gacgaaatgcttcggggagctgaaaagaagcatagatccggagattcccgaataggttaa 117546 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| |||||| |||||||| || || | |||||||||||| ||||||||||||||| Sbjct: 117547 ccttttgaactgc-tgctgaattcacaagtaagcaagagacaacttggcgaactgaaaca 117605 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 117606 tcttagtagccag-aggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 117664 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 117665 gggagtagcctaaaccgtgaaaacggggttgtgggagagcaatataagcgttgtgctgct 117724 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 ||| ||||| ||||||| | |||||| | |||| | ||||||||||||||||||| ||| Sbjct: 117725 aggtgaagcagttgagttctgcaccccagatggtgagagtccagtagccgaaagcaccac 117784 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 | |||| || | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117785 tgtcttacactttaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 117844 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117845 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 117904 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||| ||| ||||||||||||| ||||| || | |||| |||| Sbjct: 117905 aggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagcttccaa 117961 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 117962 gcagtgagaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgactt 118021 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 118022 ataggcagtgg 118032
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 694 bits (350), Expect = 0.0 Identities = 503/551 (91%), Gaps = 5/551 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||| || Sbjct: 66 gacgaaatgcttcggggagctgaaaagaagcatagatccggagattcccgaataggttaa 125 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| |||||| |||||||| || || | |||||||||||| ||||||||||||||| Sbjct: 126 ccttttgaactgc-tgctgaattcacaagtaagcaagagacaacttggcgaactgaaaca 184 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 185 tcttagtagccag-aggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 243 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 244 gggagtagcctaaaccgtgaaaacggggttgtgggagagcaatataagcgttgtgctgct 303 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 ||| ||||| ||||||| | |||||| | |||| | ||||||||||||||||||| ||| Sbjct: 304 aggtgaagcagttgagttctgcaccccagatggtgagagtccagtagccgaaagcaccac 363 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 | |||| || | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 tgtcttacactttaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 423 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 424 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 483 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 |||||||||||||||||| ||| ||||||||||||| ||||| || | |||| |||| Sbjct: 484 aggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagcttccaa 540 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 |||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 541 gcagtgagaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgactt 600 Query: 554 ataggcagtgg 564 ||||||||||| Sbjct: 601 ataggcagtgg 611
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 692 bits (349), Expect = 0.0 Identities = 506/555 (91%), Gaps = 9/555 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||| |||||||||| || ||||||||||||||| ||||||| || Sbjct: 67 gacgaaatgcttcggggagctgaaaataagtatggatccggagattcccgaataggttaa 126 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||||||||||| |||||||| ||| || |||||||||||||| |||||||||||||| Sbjct: 127 ccttttaaactgc-tgctgaattcataggcgggcaagagacaacccggcgaactgaaaca 185 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 186 tcttagtagccgg-aggaaaagaaagcaaaagcgattctcgtagtagcggcgagcgaaat 244 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaa----gcgttgtgc 249 |||||| |||||||||||||||||||||||||||| |||| |||||| || ||| || Sbjct: 245 gggagcggcctaaaccgtgaaaacggggttgtgggggagctatacaaataagcattgcgc 304 Query: 250 tgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagca 309 ||||||||||||| ||||||| | |||||| | |||| | ||||||||| ||||||||| Sbjct: 305 tgctaggcgaagcagttgagtcctgcaccccagatggtgagagtccagtaaccgaaagca 364 Query: 310 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 369 | || | |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 365 taacaatcttatgctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 424 Query: 370 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 425 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 484 Query: 430 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 489 |||||||||||||||||||||| ||| ||||||||||||| |||||||| | ||||| Sbjct: 485 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctc 541 Query: 490 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 549 ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 542 ccaagcagtgggaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcg 601 Query: 550 actcataggcagtgg 564 ||| ||||||||||| Sbjct: 602 acttataggcagtgg 616
>dbj|AK107856.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-B02, full insert sequence Length = 998 Score = 690 bits (348), Expect = 0.0 Identities = 363/367 (98%), Gaps = 1/367 (0%) Strand = Plus / Plus Query: 45 atagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagca 104 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 atagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagca 60 Query: 105 ggcaagagacaacctggcgaactgaaacatcttagtagccagtaggaaaagaaagcaaaa 164 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 61 ggcaagagacaacctggcgaactgaaacatcttagtagccag-aggaaaagaaagcaaaa 119 Query: 165 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 224 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 179 Query: 225 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctanat 284 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 180 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagat 239 Query: 285 ggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgggg 344 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 240 ggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgggg 299 Query: 345 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 359 Query: 405 accgata 411 ||||||| Sbjct: 360 accgata 366
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 682 bits (344), Expect = 0.0 Identities = 510/552 (92%), Gaps = 19/552 (3%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 667 gacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtca- 609 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||| |||| |||||||||||||| |||||||||||||| || |||| ||| ||| Sbjct: 608 -ctt---gactg-ctgctgaatccatg-gcaggcaagagaca--ct-gcga--tga-aca 561 Query: 134 tcttagtagccagtaggaaaagaaa-gcaaaagcgattcccgtagtagcggcgagcgaaa 192 ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 560 tcttagtagccag-aggaaaagaaaggcaaaagcgattcccgtagtagcggcgagcgaaa 502 Query: 193 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 252 ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 501 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcgatacaagcgtcgtgctgc 442 Query: 253 taggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatca 312 ||||||||||||| |||||| |||||||| ||||| | |||||||||||||||||||||| Sbjct: 441 taggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatca 382 Query: 313 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 372 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 322 Query: 373 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 321 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 262 Query: 433 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 492 | ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||| Sbjct: 261 agggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccca 205 Query: 493 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 552 |||||||||||| | | | |||||||||||||||||||||||||||||||||||||| Sbjct: 204 agcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgact 146 Query: 553 cataggcagtgg 564 |||||||||||| Sbjct: 145 cataggcagtgg 134
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 680 bits (343), Expect = 0.0 Identities = 503/552 (91%), Gaps = 6/552 (1%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||| ||||||| ||||| ||||||||||||||| ||||||| || Sbjct: 146493 gacgaaatgcttcggggagctgaaaatgagcatggatccggagattcccgaataggttaa 146434 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| |||| | |||||||| ||| |||||| ||||||||||||||||||||||||| Sbjct: 146433 ccttttgaactac-tgctgaattcataggcaggcgagagacaacctggcgaactgaaaca 146375 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 146374 tcttagtagccag-aggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 146316 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 146315 gggagtagcctaaaccgtgaaaacggggttgtgggagagcaatataagcgttttgctgct 146256 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 ||||||||| ||||||| | | |||||| |||| | ||||||||||||||||||||||| Sbjct: 146255 aggcgaagcagttgagtcctgtaccctagatggtgagagtccagtagccgaaagcatcac 146196 Query: 314 tagc-ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 372 | || |||||||| ||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 146195 tggctttatgctccaacccgagtagcatggggcacgcagaatcccgtgtgaatcagcaag 146136 Query: 373 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 432 |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 146135 gaccaccttgtaaggctaaatactcctgggtgaccgatagcaaagtagtaccgtgaggga 146076 Query: 433 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 492 |||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||| Sbjct: 146075 aaggtgaaaagaacccccgtcggggagtgaaatagaacatgaaaccg---taggctccca 146019 Query: 493 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 552 |||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||| Sbjct: 146018 agcagtgggaggagaatcggatccctgaccgcgtgcctgttgaagaatgagccggcgact 145959 Query: 553 cataggcagtgg 564 ||||||||||| Sbjct: 145958 tataggcagtgg 145947 Score = 680 bits (343), Expect = 0.0 Identities = 503/552 (91%), Gaps = 6/552 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||| ||||||| ||||| ||||||||||||||| ||||||| || Sbjct: 111969 gacgaaatgcttcggggagctgaaaatgagcatggatccggagattcccgaataggttaa 112028 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| |||| | |||||||| ||| |||||| ||||||||||||||||||||||||| Sbjct: 112029 ccttttgaactac-tgctgaattcataggcaggcgagagacaacctggcgaactgaaaca 112087 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 112088 tcttagtagccag-aggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 112146 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 112147 gggagtagcctaaaccgtgaaaacggggttgtgggagagcaatataagcgttttgctgct 112206 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 ||||||||| ||||||| | | |||||| |||| | ||||||||||||||||||||||| Sbjct: 112207 aggcgaagcagttgagtcctgtaccctagatggtgagagtccagtagccgaaagcatcac 112266 Query: 314 tagc-ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 372 | || |||||||| ||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 112267 tggctttatgctccaacccgagtagcatggggcacgcagaatcccgtgtgaatcagcaag 112326 Query: 373 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 432 |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 112327 gaccaccttgtaaggctaaatactcctgggtgaccgatagcaaagtagtaccgtgaggga 112386 Query: 433 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 492 |||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||| Sbjct: 112387 aaggtgaaaagaacccccgtcggggagtgaaatagaacatgaaaccg---taggctccca 112443 Query: 493 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 552 |||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||| Sbjct: 112444 agcagtgggaggagaatcggatccctgaccgcgtgcctgttgaagaatgagccggcgact 112503 Query: 553 cataggcagtgg 564 ||||||||||| Sbjct: 112504 tataggcagtgg 112515
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 678 bits (342), Expect = 0.0 Identities = 383/398 (96%), Gaps = 13/398 (3%) Strand = Plus / Minus Query: 172 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 231 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75478 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 75419 Query: 232 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaa 291 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 75418 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 75359 Query: 292 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 351 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 75358 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 75299 Query: 352 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 406 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 75298 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 75239 Query: 407 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75238 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 75179 Query: 467 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 526 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 75178 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 75127 Query: 527 gcctgttgaagaatgagccggcgactcataggcagtgg 564 |||||||||||||||||||||||||||||||||||||| Sbjct: 75126 gcctgttgaagaatgagccggcgactcataggcagtgg 75089 Score = 299 bits (151), Expect = 5e-78 Identities = 161/163 (98%), Gaps = 1/163 (0%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75646 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 75587 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75586 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 75527 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgta 176 ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 75526 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgta 75485 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 102 gcaggcaagagacaacctggcgaactgaaacatcttagta 141 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 430381 gcaggcaagagacaacctagcgaactgaaacatcttagta 430342 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 403 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 449 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 400814 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 400860
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 678 bits (342), Expect = 0.0 Identities = 383/398 (96%), Gaps = 13/398 (3%) Strand = Plus / Plus Query: 172 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 231 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382060 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 382119 Query: 232 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaa 291 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 382120 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 382179 Query: 292 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 351 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 382180 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 382239 Query: 352 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 406 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 382240 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 382299 Query: 407 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382300 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 382359 Query: 467 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 526 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 382360 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 382411 Query: 527 gcctgttgaagaatgagccggcgactcataggcagtgg 564 |||||||||||||||||||||||||||||||||||||| Sbjct: 382412 gcctgttgaagaatgagccggcgactcataggcagtgg 382449 Score = 299 bits (151), Expect = 5e-78 Identities = 161/163 (98%), Gaps = 1/163 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381892 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 381951 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381952 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 382011 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgta 176 ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 382012 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgta 382053 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 102 gcaggcaagagacaacctggcgaactgaaacatcttagta 141 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 254042 gcaggcaagagacaacctagcgaactgaaacatcttagta 254081 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 102 gcaggcaagagacaacctggcgaactgaaacatcttagta 141 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 125350 gcaggcaagagacaacctagcgaactgaaacatcttagta 125389 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 403 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 449 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 283605 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 283559 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 403 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 449 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 154913 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 154867
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 678 bits (342), Expect = 0.0 Identities = 383/398 (96%), Gaps = 13/398 (3%) Strand = Plus / Minus Query: 172 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 231 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113569 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 113510 Query: 232 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaa 291 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 113509 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 113450 Query: 292 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 351 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 113449 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 113390 Query: 352 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 406 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 113389 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 113330 Query: 407 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113329 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 113270 Query: 467 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 526 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 113269 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 113218 Query: 527 gcctgttgaagaatgagccggcgactcataggcagtgg 564 |||||||||||||||||||||||||||||||||||||| Sbjct: 113217 gcctgttgaagaatgagccggcgactcataggcagtgg 113180 Score = 299 bits (151), Expect = 5e-78 Identities = 161/163 (98%), Gaps = 1/163 (0%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113737 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 113678 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113677 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 113618 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgta 176 ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 113617 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgta 113576 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 102 gcaggcaagagacaacctggcgaactgaaacatcttagta 141 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 323068 gcaggcaagagacaacctagcgaactgaaacatcttagta 323029 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 403 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 449 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 293448 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 293494
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 678 bits (342), Expect = 0.0 Identities = 383/398 (96%), Gaps = 13/398 (3%) Strand = Plus / Minus Query: 172 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 231 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368251 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 368192 Query: 232 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaa 291 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 368191 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 368132 Query: 292 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 351 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 368131 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 368072 Query: 352 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 406 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 368071 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 368012 Query: 407 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368011 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 367952 Query: 467 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 526 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 367951 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 367900 Query: 527 gcctgttgaagaatgagccggcgactcataggcagtgg 564 |||||||||||||||||||||||||||||||||||||| Sbjct: 367899 gcctgttgaagaatgagccggcgactcataggcagtgg 367862 Score = 678 bits (342), Expect = 0.0 Identities = 383/398 (96%), Gaps = 13/398 (3%) Strand = Plus / Minus Query: 172 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 231 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184856 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 184797 Query: 232 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctanatggctaaa 291 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 184796 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 184737 Query: 292 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 351 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 184736 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 184677 Query: 352 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 406 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 184676 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 184617 Query: 407 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184616 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 184557 Query: 467 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 526 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 184556 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 184505 Query: 527 gcctgttgaagaatgagccggcgactcataggcagtgg 564 |||||||||||||||||||||||||||||||||||||| Sbjct: 184504 gcctgttgaagaatgagccggcgactcataggcagtgg 184467 Score = 299 bits (151), Expect = 5e-78 Identities = 161/163 (98%), Gaps = 1/163 (0%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368419 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 368360 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368359 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 368300 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgta 176 ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 368299 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgta 368258 Score = 299 bits (151), Expect = 5e-78 Identities = 161/163 (98%), Gaps = 1/163 (0%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 185024 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 184965 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184964 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 184905 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgta 176 ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 184904 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgta 184863 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 102 gcaggcaagagacaacctggcgaactgaaacatcttagta 141 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 295897 gcaggcaagagacaacctagcgaactgaaacatcttagta 295858 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 403 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 449 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 266283 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 266329
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 672 bits (339), Expect = 0.0 Identities = 416/437 (95%), Gaps = 5/437 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 63 gacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaa 122 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 123 cctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaaca 181 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 240 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 241 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 300 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||| || | | |||||||| ||||| | ||||||||||||||||||||||| Sbjct: 301 aggcgaagcggtggaatactgcaccctagatggcgatagtccagtagccgaaagcatcac 360 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 420 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 ||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||| Sbjct: 421 accaccttgcaaggctaaatactac--ggtgaccgatagtgaagtagtaccgtgagggaa 478 Query: 434 aggtgaaaagaaccccc 450 |||| ||||||||||| Sbjct: 479 gggtg-aaagaaccccc 494
>gb|DQ166037.1| Passiflora edulis 23S ribosomal RNA gene, partial sequence; chloroplast Length = 467 Score = 666 bits (336), Expect = 0.0 Identities = 406/427 (95%), Gaps = 2/427 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 43 gacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaa 102 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| ||||||| ||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct: 103 cctttcaaactgc-tgccgaatccatgggcaggcaagagacaacctggcgaactgaaaca 161 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 162 tcttagtaaccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 220 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 221 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 280 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 ||||||||||| || |||||||||| |||| ||||||||||||||||||||||| Sbjct: 281 aggcgaagcggccgaacaccgcaccctagatggtgggagtccagtagccgaaagcatcac 340 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 341 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 400 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 401 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 460 Query: 434 aggtgaa 440 |||||| Sbjct: 461 gggtgaa 467
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 624 bits (315), Expect = e-176 Identities = 336/342 (98%), Gaps = 1/342 (0%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 123404 gacgaaatgcttcggggagttgaaattaagcatagatccggagattcccaaataggtcaa 123345 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123344 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 123285 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123284 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 123226 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123225 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 123166 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 123165 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 123106 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatc 355 ||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 123105 tagcttacgctctgccccgagtagcatggggcacgtggaatc 123064 Score = 422 bits (213), Expect = e-115 Identities = 216/217 (99%) Strand = Plus / Minus Query: 347 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122820 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 122761 Query: 407 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122760 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 122701 Query: 467 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122700 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 122641 Query: 527 gcctgttgaagaatgagccggcgactcataggcagtg 563 ||||||||||||||||||||| ||||||||||||||| Sbjct: 122640 gcctgttgaagaatgagccggtgactcataggcagtg 122604
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 624 bits (315), Expect = e-176 Identities = 336/342 (98%), Gaps = 1/342 (0%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 12825945 gacgaaatgcttcggggagttgaaattaagcatagatccggagattcccaaataggtcaa 12825886 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825885 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 12825826 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825825 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 12825767 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825766 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 12825707 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 12825706 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 12825647 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatc 355 ||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 12825646 tagcttacgctctgccccgagtagcatggggcacgtggaatc 12825605 Score = 422 bits (213), Expect = e-115 Identities = 216/217 (99%) Strand = Plus / Minus Query: 347 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825361 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 12825302 Query: 407 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825301 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 12825242 Query: 467 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825241 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 12825182 Query: 527 gcctgttgaagaatgagccggcgactcataggcagtg 563 ||||||||||||||||||||| ||||||||||||||| Sbjct: 12825181 gcctgttgaagaatgagccggtgactcataggcagtg 12825145 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 292 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 351 ||||||||||||||||||||||||||||||||||||| || |||||||||| ||| |||| Sbjct: 16021783 gtccagtagccgaaagcatcactagcttatgctctgaaccaagtagcatggcgcatgtgg 16021842
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 620 bits (313), Expect = e-174 Identities = 495/549 (90%), Gaps = 9/549 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||| |||||||| ||| || || Sbjct: 66 gacgaaatgcttcggggagttgaaaataagcatagatccgtagattcccgaatggggtaa 125 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| | ||||| |||| |||||||| ||||| |||||||||||||||||||||||||| Sbjct: 126 cctttcacactgc-tgctcaatccatgggcaggaaagagacaacctggcgaactgaaaca 184 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 185 tcttagtagccag-aggaaaataaagcaaaagcgattcccatagtagcggcgagcgaaat 243 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||| |||||||||||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 244 gggatcagcctaaaccgcgaaaacggggttgtgggagagcaataaaagcgtcgtgctgct 303 Query: 254 aggcgaagc-ggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatca 312 ||||||||| | || | || |||||||| ||||| |||||||||||| | ||||||||| Sbjct: 304 aggcgaagcagcttaaatgatgcaccctagatggcgaaagtccagtagtcaaaagcatca 363 Query: 313 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 372 ||| || |||||||||||||||||||||| |||||| ||||||||||||||||||||| Sbjct: 364 ctacgttgcgctctgacccgagtagcatgggacacgtgtaatcccgtgtgaatcagcaag 423 Query: 373 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 432 ||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||| Sbjct: 424 gaccaccttgcaaggctaaatactcctgggtaaccaatagtaaagtagtaccgtgaggga 483 Query: 433 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 492 | ||||||||||| ||||| |||| ||||||||||||| |||||||| | |||| ||| Sbjct: 484 agggtgaaaagaa-ccccattggggagtgaaatagaacatgaaaccg---taagctacca 539 Query: 493 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 552 |||||||||||| | || | |||||||||||||||||||||||||||||||||||||| Sbjct: 540 agcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgact 597 Query: 553 cataggcag 561 ||||||||| Sbjct: 598 cataggcag 606
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 545 bits (275), Expect = e-152 Identities = 278/279 (99%) Strand = Plus / Plus Query: 286 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 345 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 60 Query: 346 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 120 Query: 406 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 180 Query: 466 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 240 Query: 526 tgcctgttgaagaatgagccggcgactcataggcagtgg 564 ||||||||||||||||||||||||||||||||||||||| Sbjct: 241 tgcctgttgaagaatgagccggcgactcataggcagtgg 279
>gb|DQ160037.1| Taraxacum officinale To27-3 mRNA, partial sequence Length = 336 Score = 543 bits (274), Expect = e-151 Identities = 320/333 (96%), Gaps = 2/333 (0%) Strand = Plus / Minus Query: 72 aaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaa 131 ||||||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 335 aacctttcaaactgc-tgctgaatccatgggcaggcaggagacaacctggcgaactgaaa 277 Query: 132 catcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaa 191 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 276 catcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaa 218 Query: 192 atgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctg 251 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 217 atgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctg 158 Query: 252 ctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatc 311 ||||||||||| || || ||| |||||||| ||||| ||||||||||||||||||||||| Sbjct: 157 ctaggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatc 98 Query: 312 actagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 371 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97 actagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 38 Query: 372 ggaccaccttgcaaggctaaatactcctgggtg 404 ||||||||||||||||||||||||||||||||| Sbjct: 37 ggaccaccttgcaaggctaaatactcctgggtg 5
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 472 bits (238), Expect = e-130 Identities = 465/539 (86%), Gaps = 4/539 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||| ||||||| | |||||||||||||||||| ||||||| || Sbjct: 143985 gacgaaatgcttcggggagccgaaaataggtatagatccggagattcccgaataggttaa 144044 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||| |||||||||||||||| || ||||| |||||||||||| |||||||||||||| Sbjct: 144045 ccttccaaactgcctgctgaattcagaagcagacaagagacaacccggcgaactgaaaca 144104 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||| | |||| | |||||||||||||||||| ||||| ||||||| |||| Sbjct: 144105 tcttagtagccgg-aggaggaaaaagcaaaagcgattcccctagtaacggcgagtgaaac 144163 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||| ||||||||||||||| ||||||||||||||||| || || | || | || Sbjct: 144164 gggaagagcctaaaccgtgaagacggggttgtgggagagtgatgagggcttcgttttact 144223 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 ||||||||| ||||||||| |||||| | |||| | ||||||||||||| ||| | | Sbjct: 144224 aggcgaagcagttgagtgctgcaccccagatggtgatagtccagtagccggaagtacagc 144283 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||| | |||| |||| |||||||||||||||| |||||||||||||||||| ||| Sbjct: 144284 tagctcacgctccaacccaagtagcatggggcacgcaaaatcccgtgtgaatcagcgagg 144343 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 ||||||||| ||||||||||| ||||| |||||||||||||||| ||||||||||||||| Sbjct: 144344 accaccttgtaaggctaaatattcctgagtgaccgatagcgaagcagtaccgtgagggaa 144403 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 ||||||||||||||||| ||| ||||||||||||| |||||||| |||||||||| Sbjct: 144404 aggtgaaaagaacccccgtcggggagtgaaatagaacatgaaaccg---cgagctcccaa 144460 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 552 ||||||||||| ||| | ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 144461 gcagtgggaggagaatgagatctctaaccgcgtgcctgttgaagaatgagccggcgact 144519 Score = 472 bits (238), Expect = e-130 Identities = 465/539 (86%), Gaps = 4/539 (0%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||| ||||||| | |||||||||||||||||| ||||||| || Sbjct: 88866 gacgaaatgcttcggggagccgaaaataggtatagatccggagattcccgaataggttaa 88807 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||| |||||||||||||||| || ||||| |||||||||||| |||||||||||||| Sbjct: 88806 ccttccaaactgcctgctgaattcagaagcagacaagagacaacccggcgaactgaaaca 88747 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||| | |||| | |||||||||||||||||| ||||| ||||||| |||| Sbjct: 88746 tcttagtagccgg-aggaggaaaaagcaaaagcgattcccctagtaacggcgagtgaaac 88688 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||| ||||||||||||||| ||||||||||||||||| || || | || | || Sbjct: 88687 gggaagagcctaaaccgtgaagacggggttgtgggagagtgatgagggcttcgttttact 88628 Query: 254 aggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcac 313 ||||||||| ||||||||| |||||| | |||| | ||||||||||||| ||| | | Sbjct: 88627 aggcgaagcagttgagtgctgcaccccagatggtgatagtccagtagccggaagtacagc 88568 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||| | |||| |||| |||||||||||||||| |||||||||||||||||| ||| Sbjct: 88567 tagctcacgctccaacccaagtagcatggggcacgcaaaatcccgtgtgaatcagcgagg 88508 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 ||||||||| ||||||||||| ||||| |||||||||||||||| ||||||||||||||| Sbjct: 88507 accaccttgtaaggctaaatattcctgagtgaccgatagcgaagcagtaccgtgagggaa 88448 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 ||||||||||||||||| ||| ||||||||||||| |||||||| |||||||||| Sbjct: 88447 aggtgaaaagaacccccgtcggggagtgaaatagaacatgaaaccg---cgagctcccaa 88391 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 552 ||||||||||| ||| | ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 88390 gcagtgggaggagaatgagatctctaaccgcgtgcctgttgaagaatgagccggcgact 88332
>gb|M37149.1|SOYCPRTG Soybean chloroplast 16S rRNA (3' end), 18S rRNA (5' end), Ile-tRNA, and Ala-tRNA genes Length = 3022 Score = 466 bits (235), Expect = e-128 Identities = 334/361 (92%), Gaps = 6/361 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaa-ataggtca 72 ||||||||||||||||||||||||||||||| ||||||||| ||||||| | |||||||| Sbjct: 2665 gacgaaatgcttcggggagttgaaaataagcgtagatccggggattcccgatataggtca 2724 Query: 73 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 132 |||||| |||||| ||||||||||| | |||||||||||||||| ||| |||||||||| Sbjct: 2725 acctttcgaactgc-tgctgaatccacgggcaggcaagagacaacttggtgaactgaaac 2783 Query: 133 atcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2784 atcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 2842 Query: 193 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 252 ||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||| Sbjct: 2843 tgggagcagcctaaaccgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgc 2902 Query: 253 taggcgaagcggttgag--tgccgcaccctanatggctaaagtccagtagccgaaagcat 310 |||||||||| | ||| ||| |||||||| ||||| | |||||||||||||||||||| Sbjct: 2903 taggcgaagcagcagagaatgctgcaccctagatggcgagagtccagtagccgaaagcat 2962 Query: 311 cactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagca 370 |||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 2963 cact-gcttacgctctgacccgagtagcatagggcacgtggaatcccgtgtgaatcagca 3021 Query: 371 a 371 | Sbjct: 3022 a 3022
>gb|M21402.1|SOYRDNASPA Soybean chloroplast 16S/23S ribosomal intergenic spacer DNA Length = 1277 Score = 466 bits (235), Expect = e-128 Identities = 334/361 (92%), Gaps = 6/361 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaa-ataggtca 72 ||||||||||||||||||||||||||||||| ||||||||| ||||||| | |||||||| Sbjct: 920 gacgaaatgcttcggggagttgaaaataagcgtagatccggggattcccgatataggtca 979 Query: 73 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 132 |||||| |||||| ||||||||||| | |||||||||||||||| ||| |||||||||| Sbjct: 980 acctttcgaactgc-tgctgaatccacgggcaggcaagagacaacttggtgaactgaaac 1038 Query: 133 atcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1039 atcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 1097 Query: 193 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 252 ||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||| Sbjct: 1098 tgggagcagcctaaaccgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgc 1157 Query: 253 taggcgaagcggttgag--tgccgcaccctanatggctaaagtccagtagccgaaagcat 310 |||||||||| | ||| ||| |||||||| ||||| | |||||||||||||||||||| Sbjct: 1158 taggcgaagcagcagagaatgctgcaccctagatggcgagagtccagtagccgaaagcat 1217 Query: 311 cactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagca 370 |||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1218 cact-gcttacgctctgacccgagtagcatagggcacgtggaatcccgtgtgaatcagca 1276 Query: 371 a 371 | Sbjct: 1277 a 1277
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 446 bits (225), Expect = e-122 Identities = 228/229 (99%) Strand = Plus / Plus Query: 336 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 395 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 60 Query: 396 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 455 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 120 Query: 456 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 515 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gtagtgaaataggacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 180 Query: 516 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 564 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 229
>dbj|AK104484.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H11, full insert sequence Length = 1091 Score = 434 bits (219), Expect = e-118 Identities = 229/231 (99%), Gaps = 1/231 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 123 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 183 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 242 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 243 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 293
>dbj|AK060870.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H08, full insert sequence Length = 1091 Score = 434 bits (219), Expect = e-118 Identities = 229/231 (99%), Gaps = 1/231 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 123 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 183 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 242 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 243 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 293
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 422 bits (213), Expect = e-115 Identities = 213/213 (100%) Strand = Plus / Plus Query: 352 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 60 Query: 412 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 120 Query: 472 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 531 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 180 Query: 532 ttgaagaatgagccggcgactcataggcagtgg 564 ||||||||||||||||||||||||||||||||| Sbjct: 181 ttgaagaatgagccggcgactcataggcagtgg 213
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 418 bits (211), Expect = e-114 Identities = 317/352 (90%), Gaps = 3/352 (0%) Strand = Plus / Minus Query: 213 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 272 ||||||||||||||||||||||||| |||||||||| |||||| ||||| ||||||| | Sbjct: 6284 aaaacggggttgtgggagagcaatataagcgttgtgtcgctaggtgaagcagttgagtcc 6225 Query: 273 cgcaccctanatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 332 |||||||| |||| | |||||||||| ||||||| || | ||||| ||||| ||||| Sbjct: 6224 tgcaccctagatggtgagagtccagtagtcgaaagcggcattggcttacgctctaacccg 6165 Query: 333 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 392 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6164 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 6105 Query: 393 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 452 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 6104 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccctat 6045 Query: 453 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 512 ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| | Sbjct: 6044 cggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaatgga 5988 Query: 513 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 564 |||||||||||||||||| ||||||||||||||||||||| ||||||||||| Sbjct: 5987 atctctgaccgcgtgccttttgaagaatgagccggcgacttataggcagtgg 5936 Score = 242 bits (122), Expect = 1e-60 Identities = 182/198 (91%), Gaps = 3/198 (1%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||| || | |||||||||||||||||||| ||||||| || Sbjct: 6509 gacgaaatgcttcggggagttgtaattc-gcatagatccggagattcccgaataggttaa 6451 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| |||||| ||||||||||||| ||||| ||| | |||||||| ||||||||||| Sbjct: 6450 ccttttgaactgc-tgctgaatccatgggcaggtaaggggcaacctggtgaactgaaaca 6392 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 |||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 6391 tcttagtaaccag-aggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 6333 Query: 194 gggagcagcctaaaccgt 211 |||||||||||||||||| Sbjct: 6332 gggagcagcctaaaccgt 6315
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 418 bits (211), Expect = e-114 Identities = 294/318 (92%), Gaps = 3/318 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||| Sbjct: 177097 gacgaaatgcttcggggagttgaaaatcagcatagatccggagattcccgaatagggcaa 177156 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| |||||| ||||||||||||| |||||||||||| |||| |||||||||||| | Sbjct: 177157 cctttcgaactgc-tgctgaatccatgggcaggcaagagagaaccaggcgaactgaaaga 177215 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 177216 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgggcgaaat 177274 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||||| |||||||||||||||||||||||||||||||||||||||||||| |||| ||| Sbjct: 177275 gggagctgcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgcagct 177334 Query: 254 aggcgaagc-ggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatca 312 ||||||||| | || ||| |||||||| ||||| |||||||||||||||||||||||| Sbjct: 177335 aggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 177394 Query: 313 ctagcttatgctctgacc 330 |||||||| ||||||||| Sbjct: 177395 ctagcttaggctctgacc 177412 Score = 99.6 bits (50), Expect = 1e-17 Identities = 50/50 (100%) Strand = Plus / Plus Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 564 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177405 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 177454 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 403 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 418398 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 418443 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 403 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 67648 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 67693 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 121 gcgaactgaaacatcttagtagc 143 ||||||||||||||||||||||| Sbjct: 417776 gcgaactgaaacatcttagtagc 417798 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 121 gcgaactgaaacatcttagtagc 143 ||||||||||||||||||||||| Sbjct: 67026 gcgaactgaaacatcttagtagc 67048
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 414 bits (209), Expect = e-112 Identities = 399/459 (86%), Gaps = 9/459 (1%) Strand = Plus / Minus Query: 105 ggcaagagacaacctggcgaactgaaacatcttagtagccagtaggaaaagaaagcaaaa 164 |||||||||| ||| ||||||| |||||||| | ||||| | |||| |||| |||||| Sbjct: 139114 ggcaagagacgacccggcgaaccgaaacatccaaatagccggg-ggaagagaaggcaaaa 139056 Query: 165 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 224 |||||||||| |||||||||||||||| ||||| ||||||||||||| |||||||||| Sbjct: 139055 gcgattcccgcagtagcggcgagcgaagagggagtagcctaaaccgtgggaacggggttg 138996 Query: 225 tgggagagcaatac----aagcgttgtgctgctaggcgaagcggttgagtgccgcaccct 280 ||||||||| ||| ||| ||||||||| |||| |||||||| |||| ||||| || Sbjct: 138995 tgggagagcgataagtataag-gttgtgctgttaggtgaagcggtcgagtcccgcatccc 138937 Query: 281 anatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcat 340 | | || || ||||| ||||||| ||||| ||| ||||| ||||||||||||||||||| Sbjct: 138936 agacggttagagtccggtagccggaagcagcacaggcttacgctctgacccgagtagcat 138877 Query: 341 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 400 |||||||||||||||||||| |||||||| |||||||||| | ||||||||||||| ||| Sbjct: 138876 ggggcacgtggaatcccgtgcgaatcagcgaggaccacctcgtaaggctaaatacttctg 138817 Query: 401 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 460 |||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||| Sbjct: 138816 ggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaacccccatcggggagt 138757 Query: 461 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctga 520 |||||||||| |||||||| | ||||||| |||||||||||| ||| ||||||||| Sbjct: 138756 gaaatagaacatgaaaccg---taagctcccgagcagtgggaggagaattggatctctga 138700 Query: 521 ccgcgtgcctgttgaagaatgagccggcgactcataggc 559 |||||||||||||||||||||||||||||||| |||||| Sbjct: 138699 ccgcgtgcctgttgaagaatgagccggcgacttataggc 138661 Score = 414 bits (209), Expect = e-112 Identities = 399/459 (86%), Gaps = 9/459 (1%) Strand = Plus / Plus Query: 105 ggcaagagacaacctggcgaactgaaacatcttagtagccagtaggaaaagaaagcaaaa 164 |||||||||| ||| ||||||| |||||||| | ||||| | |||| |||| |||||| Sbjct: 82763 ggcaagagacgacccggcgaaccgaaacatccaaatagccggg-ggaagagaaggcaaaa 82821 Query: 165 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 224 |||||||||| |||||||||||||||| ||||| ||||||||||||| |||||||||| Sbjct: 82822 gcgattcccgcagtagcggcgagcgaagagggagtagcctaaaccgtgggaacggggttg 82881 Query: 225 tgggagagcaatac----aagcgttgtgctgctaggcgaagcggttgagtgccgcaccct 280 ||||||||| ||| ||| ||||||||| |||| |||||||| |||| ||||| || Sbjct: 82882 tgggagagcgataagtataag-gttgtgctgttaggtgaagcggtcgagtcccgcatccc 82940 Query: 281 anatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcat 340 | | || || ||||| ||||||| ||||| ||| ||||| ||||||||||||||||||| Sbjct: 82941 agacggttagagtccggtagccggaagcagcacaggcttacgctctgacccgagtagcat 83000 Query: 341 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 400 |||||||||||||||||||| |||||||| |||||||||| | ||||||||||||| ||| Sbjct: 83001 ggggcacgtggaatcccgtgcgaatcagcgaggaccacctcgtaaggctaaatacttctg 83060 Query: 401 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 460 |||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||| Sbjct: 83061 ggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaacccccatcggggagt 83120 Query: 461 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctga 520 |||||||||| |||||||| | ||||||| |||||||||||| ||| ||||||||| Sbjct: 83121 gaaatagaacatgaaaccg---taagctcccgagcagtgggaggagaattggatctctga 83177 Query: 521 ccgcgtgcctgttgaagaatgagccggcgactcataggc 559 |||||||||||||||||||||||||||||||| |||||| Sbjct: 83178 ccgcgtgcctgttgaagaatgagccggcgacttataggc 83216
>gb|DQ160136.1| Taraxacum officinale To110-2 mRNA, partial sequence Length = 282 Score = 408 bits (206), Expect = e-111 Identities = 260/276 (94%), Gaps = 4/276 (1%) Strand = Plus / Plus Query: 289 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 348 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3 aaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacg 62 Query: 349 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 122 Query: 409 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 468 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 123 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 182 Query: 469 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 528 || |||||||| | |||||||||||||||||||||| | | |||||||||||||| Sbjct: 183 acatgaaaccg---taagctcccaagcagtgggaggggcccg-gggctctgaccgcgtgc 238 Query: 529 ctgttgaagaatgagccggcgactcataggcagtgg 564 |||||||||||||||||||||||||||||||||||| Sbjct: 239 ctgttgaagaatgagccggcgactcataggcagtgg 274
>gb|DQ460110.1| Nicotiana tabacum cDNA-AFLP fragment H-N_BC3M12-1 sequence Length = 249 Score = 398 bits (201), Expect = e-108 Identities = 237/248 (95%), Gaps = 1/248 (0%) Strand = Plus / Plus Query: 165 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 224 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1 gcgattcccgtagtagcggcgagcgaaatgggagcagcctagaccgtgaaaacggggttg 60 Query: 225 tgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctana 283 |||||||||||||||||||| ||||||||||||||||| | || ||| |||||||| | Sbjct: 61 tgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctaga 120 Query: 284 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 343 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 Query: 344 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 403 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgctaggctaaatactcctgggt 240 Query: 404 gaccgata 411 |||||||| Sbjct: 241 gaccgata 248
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 391 bits (197), Expect = e-105 Identities = 291/320 (90%), Gaps = 2/320 (0%) Strand = Plus / Minus Query: 67 aggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaac 126 |||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||| ||| Sbjct: 3695 aggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcaaac 3637 Query: 127 tgaaacatcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcga 186 ||||| |||||||||||||| |||||||||||||||||| ||||||||||||| || ||| Sbjct: 3636 tgaaatatcttagtagccag-aggaaaagaaagcaaaagtgattcccgtagtaacgacga 3578 Query: 187 gcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttg 246 | ||||||||||||||||||||||| |||| | ||||||||||||||||| ||| ||| | Sbjct: 3577 gtgaaatgggagcagcctaaaccgtaaaaatgaggttgtgggagagcaatgcaaacgtag 3518 Query: 247 tgctgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaa 306 ||| ||||||| ||||||| ||||| |||||||| ||||| | ||| ||||||||||| Sbjct: 3517 tgccgctaggcaaagcggtggagtgttgcaccctagatggcgagagtttagtagccgaaa 3458 Query: 307 gcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatc 366 ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3457 gcatccctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatt 3398 Query: 367 agcaaggaccaccttgcaag 386 |||||||||||||||||||| Sbjct: 3397 agcaaggaccaccttgcaag 3378 Score = 95.6 bits (48), Expect = 1e-16 Identities = 75/84 (89%) Strand = Plus / Minus Query: 395 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 454 ||||||| ||||| |||| |||||||||||||||||||| ||||||||||||||||| | Sbjct: 3365 ctcctggctgacctatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 3306 Query: 455 ggtagtgaaatagaacgtgaaacc 478 || |||||||||||| ||||||| Sbjct: 3305 gggagtgaaatagaagatgaaacc 3282 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Minus Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 564 |||||||||||| ||| ||||||||||||||| ||||||||||||||||| Sbjct: 3249 ctctgaccgcgtacctattgaagaatgagccgacgactcataggcagtgg 3200 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggag 56 ||||||||||||| | |||||| |||||||| |||||| |||| Sbjct: 3736 gacgaaatgcttcagagagttgcaaataagcgtagatcaggag 3694
>emb|AJ538583.1|NTA538583 Nicotiana tabacum cDNA-AFLP-fragment BC3-M31-041 Length = 226 Score = 349 bits (176), Expect = 6e-93 Identities = 199/207 (96%) Strand = Plus / Plus Query: 274 gcaccctanatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 333 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10 gcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccga 69 Query: 334 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 393 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 70 gtagcatggggcacgtggaatcccgtgtgaatcaacaaggaccaccttgcaaggctaaat 129 Query: 394 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 453 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 130 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 189 Query: 454 gggtagtgaaatagaacgtgaaaccgt 480 ||| ||||||||||||| ||||||||| Sbjct: 190 ggggagtgaaatagaacatgaaaccgt 216
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 329 bits (166), Expect = 6e-87 Identities = 204/214 (95%), Gaps = 2/214 (0%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 79704 gacgaaatgcttcggggagttgaaaataagcatagatccgaggattcccgaataggtcaa 79645 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||| |||||| |||||||| || |||||||||||||||||||||||||||||||||| Sbjct: 79644 cctttcgaactgc-tgctgaattcacgagcaggcaagagacaacctggcgaactgaaaca 79586 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79585 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 79527 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgg 227 |||| ||||||||||||||||||||||||||||| Sbjct: 79526 gggaacagcctaaaccgtgaaaacggggttgtgg 79493
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 319 bits (161), Expect = 6e-84 Identities = 455/542 (83%), Gaps = 16/542 (2%) Strand = Plus / Plus Query: 17 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 75 ||||||||| |||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgctttggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 76 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 135 ||| |||||| |||| | |||||| |||| ||||||| ||||||| ||||||||||||| Sbjct: 128 ttt--aactgc-tgcttattccatg-gcagacaagaga-aacctggtgaactgaaacatc 182 Query: 136 ttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 195 ||||||||||| ||||||| |||||||||| |||||| |||||| ||| | |||| || Sbjct: 183 ttagtagccag-aggaaaataaagcaaaagttattcccatagtagtggcaaatgaaaagg 241 Query: 196 gagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctag 255 || ||||||||| || |||| ||||||| || ||||||| ||| || || |||||| Sbjct: 242 gaacagcctaaatcgctaaaatggggttgggg---agcaataaaagtattttgttgctag 298 Query: 256 gcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcacta 315 || || || |||| | | |||||| |||| | |||||||||| |||| |||| || Sbjct: 299 acggagtagtggagttctgaaccctagatggtgagagtccagtagtataaagtatcatta 358 Query: 316 gcttatgctctga-cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 374 ||||||||| | | ||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 359 gcttatgcttttaacccgagtagcatgggacatatggaatcccgtgtgaatcagcaagga 418 Query: 375 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 434 |||||||| |||||||||||||| ||||||||| |||| |||||||||||||||||||| Sbjct: 419 ccaccttgaaaggctaaatactcttgggtgaccaatagtgaagtagtaccgtgagggaag 478 Query: 435 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 494 ||||||||||||||||| |||| |||||| |||||| ||||| | | ||| ||||| Sbjct: 479 ggtgaaaagaacccccattggggagtgaactagaacatgaaaac---atatgctaccaag 535 Query: 495 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 554 |||||||||| || || | |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 536 cagtgggaggagacaggg--ctctgaccacgtgcccgttgaagaatgagtcggcgactca 593 Query: 555 ta 556 || Sbjct: 594 ta 595
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 Score = 311 bits (157), Expect = 1e-81 Identities = 167/169 (98%), Gaps = 1/169 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75832 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 75891 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 75892 ccttttaaactgcctgcggaatccatgagcaggcaagagacaacctggcgaactgaaaca 75951 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcg 182 ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 75952 tcttagtagccag-aggaaaagaaagcaaaagcgattcccgtagtagcg 75999 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 403 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 449 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 374093 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 374047 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 403 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 449 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 262355 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 262309 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 ggcgaactgaaacatcttag 139 |||||||||||||||||||| Sbjct: 320856 ggcgaactgaaacatcttag 320837
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 307 bits (155), Expect = 2e-80 Identities = 217/237 (91%), Gaps = 3/237 (1%) Strand = Plus / Plus Query: 328 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 387 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 378 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 437 Query: 388 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 447 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 438 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 497 Query: 448 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 507 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| || Sbjct: 498 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 554 Query: 508 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 564 | | |||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 555 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtgg 611 Score = 218 bits (110), Expect = 2e-53 Identities = 177/198 (89%), Gaps = 1/198 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||| ||| || |||||| ||||||||||| ||| |||||| || Sbjct: 54 gacgaaatgcttcggggagctgagaacaagcattgatccggagatgcccgaataggggaa 113 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||| || |||||||||||||| || | |||||||||||||||||||||||||||||| Sbjct: 114 cctatttgactgcctgctgaattgatagggaggcaagagacaacctggcgaactgaaaca 173 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 174 tcttagtagccag-aggaaaagaaagcaaaagcgattccctgagtagtggcgagcgaaat 232 Query: 194 gggagcagcctaaaccgt 211 |||| ||||||||||||| Sbjct: 233 gggaacagcctaaaccgt 250
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 307 bits (155), Expect = 2e-80 Identities = 217/237 (91%), Gaps = 3/237 (1%) Strand = Plus / Plus Query: 328 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 387 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 391 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 450 Query: 388 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 447 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 451 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 510 Query: 448 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 507 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| || Sbjct: 511 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 567 Query: 508 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 564 | | |||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 568 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtgg 624 Score = 218 bits (110), Expect = 2e-53 Identities = 177/198 (89%), Gaps = 1/198 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||| ||| || |||||| ||||||||||| ||| |||||| || Sbjct: 67 gacgaaatgcttcggggagctgagaacaagcattgatccggagatgcccgaataggggaa 126 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||| || |||||||||||||| || | |||||||||||||||||||||||||||||| Sbjct: 127 cctatttgactgcctgctgaattgatagggaggcaagagacaacctggcgaactgaaaca 186 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 187 tcttagtagccag-aggaaaagaaagcaaaagcgattccctgagtagtggcgagcgaaat 245 Query: 194 gggagcagcctaaaccgt 211 |||| ||||||||||||| Sbjct: 246 gggaacagcctaaaccgt 263
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 305 bits (154), Expect = 8e-80 Identities = 216/236 (91%), Gaps = 3/236 (1%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 496 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 555 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 556 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 615 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 508 ||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| Sbjct: 616 ccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaa 672 Query: 509 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 564 | |||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 673 tggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtgg 728 Score = 208 bits (105), Expect = 1e-50 Identities = 175/197 (88%), Gaps = 1/197 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||| || ||| || |||||| ||||||||||| ||| |||||| || Sbjct: 171 gacgaaatgcttcgggaagctgagaacaagcattgatccggagatgcccgaataggggaa 230 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||| || |||||||||||||| || | |||||||||||||||||||||||||||||| Sbjct: 231 cctatttgactgcctgctgaattgatagggaggcaagagacaacctggcgaactgaaaca 290 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 291 tcttagtagccag-aggaaaagaaagcaaaagcgattccctgagtagtggcgagcgaaat 349 Query: 194 gggagcagcctaaaccg 210 |||| |||||||||||| Sbjct: 350 gggaacagcctaaaccg 366
>gb|AC137922.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0046A04, complete sequence Length = 141001 Score = 287 bits (145), Expect = 2e-74 Identities = 194/209 (92%), Gaps = 1/209 (0%) Strand = Plus / Plus Query: 283 atggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcatg 341 |||| |||| |||||||||||||||||||||||||||| ||||| |||| |||||||||| Sbjct: 95253 atggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcatg 95312 Query: 342 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 401 || ||||||||||| ||||||| || |||| ||||||||||||||||||||||||||| Sbjct: 95313 ggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctgg 95372 Query: 402 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 461 |||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 95373 gtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagtg 95432 Query: 462 aaatagaacgtgaaaccgtgctgagctcc 490 ||||||||||||||||||||||||||||| Sbjct: 95433 aaatagaacgtgaaaccgtgctgagctcc 95461
>gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007C02, complete sequence Length = 148265 Score = 287 bits (145), Expect = 2e-74 Identities = 194/209 (92%), Gaps = 1/209 (0%) Strand = Plus / Minus Query: 283 atggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcatg 341 |||| |||| |||||||||||||||||||||||||||| ||||| |||| |||||||||| Sbjct: 936 atggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcatg 877 Query: 342 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 401 || ||||||||||| ||||||| || |||| ||||||||||||||||||||||||||| Sbjct: 876 ggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctgg 817 Query: 402 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 461 |||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 816 gtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagtg 757 Query: 462 aaatagaacgtgaaaccgtgctgagctcc 490 ||||||||||||||||||||||||||||| Sbjct: 756 aaatagaacgtgaaaccgtgctgagctcc 728
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 287 bits (145), Expect = 2e-74 Identities = 194/209 (92%), Gaps = 1/209 (0%) Strand = Plus / Plus Query: 283 atggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcatg 341 |||| |||| |||||||||||||||||||||||||||| ||||| |||| |||||||||| Sbjct: 11893526 atggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcatg 11893585 Query: 342 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 401 || ||||||||||| ||||||| || |||| ||||||||||||||||||||||||||| Sbjct: 11893586 ggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctgg 11893645 Query: 402 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 461 |||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 11893646 gtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagtg 11893705 Query: 462 aaatagaacgtgaaaccgtgctgagctcc 490 ||||||||||||||||||||||||||||| Sbjct: 11893706 aaatagaacgtgaaaccgtgctgagctcc 11893734 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 483 tgagctcccaagcagtgggaggggaaagtgatc 515 |||||||||||| |||||||| ||||||||||| Sbjct: 9056543 tgagctcccaagtagtgggagaggaaagtgatc 9056575
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 287 bits (145), Expect = 2e-74 Identities = 194/209 (92%), Gaps = 1/209 (0%) Strand = Plus / Plus Query: 283 atggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcatg 341 |||| |||| |||||||||||||||||||||||||||| ||||| |||| |||||||||| Sbjct: 11971933 atggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcatg 11971992 Query: 342 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 401 || ||||||||||| ||||||| || |||| ||||||||||||||||||||||||||| Sbjct: 11971993 ggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctgg 11972052 Query: 402 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 461 |||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 11972053 gtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagtg 11972112 Query: 462 aaatagaacgtgaaaccgtgctgagctcc 490 ||||||||||||||||||||||||||||| Sbjct: 11972113 aaatagaacgtgaaaccgtgctgagctcc 11972141 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 483 tgagctcccaagcagtgggaggggaaagtgatc 515 |||||||||||| |||||||| ||||||||||| Sbjct: 9128240 tgagctcccaagtagtgggagaggaaagtgatc 9128272
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 285 bits (144), Expect = 8e-74 Identities = 227/253 (89%), Gaps = 5/253 (1%) Strand = Plus / Plus Query: 304 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 363 |||| |||| ||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 373 aaagtatcattagcttatgctttgacccgagtagcatgggacacgtggaatcccgtgtga 432 Query: 364 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 423 |||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||| Sbjct: 433 atcagcaaggaccaccttgcaaggctaaatactcttgggtgaccaatagtgaagtagtac 492 Query: 424 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 483 | |||||||| ||||||||||||||| | |||| ||||||||||||| ||||| | | Sbjct: 493 catgagggaagggtgaaaagaacccctattggggagtgaaatagaacatgaaaac---at 549 Query: 484 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 543 |||| ||||||||||||||| | || | ||||||||||||||||||||||||||||| Sbjct: 550 aagctaccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgag 607 Query: 544 ccggcgactcata 556 ||||||||||||| Sbjct: 608 ccggcgactcata 620 Score = 117 bits (59), Expect = 4e-23 Identities = 109/123 (88%), Gaps = 2/123 (1%) Strand = Plus / Plus Query: 102 gcaggcaagagacaacctggcgaactgaaacatcttagtagccagtaggaaaagaaagca 161 |||| ||||||| ||||||| |||||||||||||||||||||||| ||||||| |||||| Sbjct: 149 gcagacaagaga-aacctggtgaactgaaacatcttagtagccag-aggaaaataaagca 206 Query: 162 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 221 |||| |||||| |||||| ||||||||||| |||| |||||||||||| |||| |||| Sbjct: 207 aaagttattcccatagtagtggcgagcgaaaagggaacagcctaaaccgctaaaatgggg 266 Query: 222 ttg 224 ||| Sbjct: 267 ttg 269
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 276 bits (139), Expect = 7e-71 Identities = 204/225 (90%), Gaps = 3/225 (1%) Strand = Plus / Plus Query: 328 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 387 |||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||| Sbjct: 337 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagg 396 Query: 388 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 447 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 397 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 456 Query: 448 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 507 ||| ||| ||||||||||||| |||||||| | ||| |||||||||||||| || Sbjct: 457 cccgtaggggagtgaaatagaacatgaaaccg---taagcctacaagcagtgggaggaga 513 Query: 508 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 552 | |||||||||||||||||||||||||||||||||||||||| Sbjct: 514 atagaatctctgaccgcgtgcctgttgaagaatgagccggcgact 558 Score = 155 bits (78), Expect = 2e-34 Identities = 143/162 (88%), Gaps = 2/162 (1%) Strand = Plus / Plus Query: 48 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 107 ||||||||||| ||| |||||| ||||| |||||||| |||||||| || |||| | Sbjct: 56 gatccggagatccccgaatagggtaacctaataaactgc-tgctgaatatataggcagac 114 Query: 108 aagagacaacctggcgaactgaaacatcttagtagccagtaggaaaagaaagcaaaagcg 167 ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 115 gagagataacctggcgaactgaaacatcttagtagccag-aggaaaagaaagcaaaagcg 173 Query: 168 attcccgtagtagcggcgagcgaaatgggagcagcctaaacc 209 |||||| ||||| |||||||||||||||| ||||||||||| Sbjct: 174 attccctcagtagtggcgagcgaaatgggaacagcctaaacc 215
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 274 bits (138), Expect = 3e-70 Identities = 212/236 (89%), Gaps = 3/236 (1%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 378 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 437 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 438 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 497 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 508 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 498 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 554 Query: 509 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 564 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||| Sbjct: 555 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtgg 610 Score = 143 bits (72), Expect = 7e-31 Identities = 166/196 (84%), Gaps = 1/196 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||| ||| |||| || ||| || |||||| ||||||||||| ||| |||||| ||| Sbjct: 54 gacgaaacgctccgggaagctgacaagaagcattgatccggagatccccgaatagggcaa 113 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||| || |||| | ||||||| || || | ||||||||||||| ||| ||||||| Sbjct: 114 cctcttgaactctccgctgaataaataggcggagcagagacaacctggtgaattgaaaca 173 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 174 tcttagtagccag-aggaaaagaaagcaaaagcgattcccttagtagcggcgagcgaaag 232 Query: 194 gggagcagcctaaacc 209 |||| ||| ||||||| Sbjct: 233 gggaacagtctaaacc 248
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 274 bits (138), Expect = 3e-70 Identities = 212/236 (89%), Gaps = 3/236 (1%) Strand = Plus / Minus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 115284 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 115225 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 115224 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 115165 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 508 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 115164 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 115108 Query: 509 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 564 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||| Sbjct: 115107 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtgg 115052 Score = 274 bits (138), Expect = 3e-70 Identities = 212/236 (89%), Gaps = 3/236 (1%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 86704 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 86763 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 86764 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 86823 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 508 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 86824 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 86880 Query: 509 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 564 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||| Sbjct: 86881 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtgg 86936 Score = 143 bits (72), Expect = 7e-31 Identities = 166/196 (84%), Gaps = 1/196 (0%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||| ||| |||| || ||| || |||||| ||||||||||| ||| |||||| ||| Sbjct: 115609 gacgaaacgctccgggaagctgacaagaagcattgatccggagatccccgaatagggcaa 115550 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||| || |||| | ||||||| || || | ||||||||||||| ||| ||||||| Sbjct: 115549 cctcttgaactctccgctgaataaataggcggagcagagacaacctggtgaattgaaaca 115490 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 115489 tcttagtagccag-aggaaaagaaagcaaaagcgattcccttagtagcggcgagcgaaag 115431 Query: 194 gggagcagcctaaacc 209 |||| ||| ||||||| Sbjct: 115430 gggaacagtctaaacc 115415 Score = 143 bits (72), Expect = 7e-31 Identities = 166/196 (84%), Gaps = 1/196 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||| ||| |||| || ||| || |||||| ||||||||||| ||| |||||| ||| Sbjct: 86379 gacgaaacgctccgggaagctgacaagaagcattgatccggagatccccgaatagggcaa 86438 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||| || |||| | ||||||| || || | ||||||||||||| ||| ||||||| Sbjct: 86439 cctcttgaactctccgctgaataaataggcggagcagagacaacctggtgaattgaaaca 86498 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 86499 tcttagtagccag-aggaaaagaaagcaaaagcgattcccttagtagcggcgagcgaaag 86557 Query: 194 gggagcagcctaaacc 209 |||| ||| ||||||| Sbjct: 86558 gggaacagtctaaacc 86573
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 274 bits (138), Expect = 3e-70 Identities = 271/315 (86%), Gaps = 3/315 (0%) Strand = Plus / Plus Query: 250 tgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagca 309 ||||||| ||||| |||||| | ||||| || |||| | ||||||||| | |||||| Sbjct: 302 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 361 Query: 310 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 369 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 362 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 421 Query: 370 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 429 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 422 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 481 Query: 430 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 489 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 482 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 538 Query: 490 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 549 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 539 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 598 Query: 550 actcataggcagtgg 564 ||| ||||||||||| Sbjct: 599 acttataggcagtgg 613 Score = 222 bits (112), Expect = 1e-54 Identities = 194/220 (88%), Gaps = 1/220 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||| || || ||||||||||||| ||| ||| |||||| ||| Sbjct: 67 gacgaaatgcttcggggagctgcgaacaagcatagatccgaagacccccgaatagggcaa 126 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||| || ||| | |||||||||||| ||| | |||||| ||||||||||||||||||| Sbjct: 127 cctcttgtactacttgctgaatccataggcaagaaagagataacctggcgaactgaaaca 186 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 187 tcttagtagccag-aggaaaagaaagcaaaagcgattccctgagtagcggcgagcgaaac 245 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagc 233 |||| |||||||||||| |||| ||||||||||||||||| Sbjct: 246 gggatcagcctaaaccgcgaaagcggggttgtgggagagc 285
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 274 bits (138), Expect = 3e-70 Identities = 271/315 (86%), Gaps = 3/315 (0%) Strand = Plus / Minus Query: 250 tgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagca 309 ||||||| ||||| |||||| | ||||| || |||| | ||||||||| | |||||| Sbjct: 124963 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 124904 Query: 310 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 369 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 124903 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 124844 Query: 370 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 429 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 124843 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 124784 Query: 430 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 489 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 124783 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 124727 Query: 490 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 549 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 124726 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 124667 Query: 550 actcataggcagtgg 564 ||| ||||||||||| Sbjct: 124666 acttataggcagtgg 124652 Score = 274 bits (138), Expect = 3e-70 Identities = 271/315 (86%), Gaps = 3/315 (0%) Strand = Plus / Plus Query: 250 tgctaggcgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagca 309 ||||||| ||||| |||||| | ||||| || |||| | ||||||||| | |||||| Sbjct: 94903 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 94962 Query: 310 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 369 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 94963 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 95022 Query: 370 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 429 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 95023 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 95082 Query: 430 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 489 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 95083 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 95139 Query: 490 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 549 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 95140 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 95199 Query: 550 actcataggcagtgg 564 ||| ||||||||||| Sbjct: 95200 acttataggcagtgg 95214 Score = 222 bits (112), Expect = 1e-54 Identities = 194/220 (88%), Gaps = 1/220 (0%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||| || || ||||||||||||| ||| ||| |||||| ||| Sbjct: 125198 gacgaaatgcttcggggagctgcgaacaagcatagatccgaagacccccgaatagggcaa 125139 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||| || ||| | |||||||||||| ||| | |||||| ||||||||||||||||||| Sbjct: 125138 cctcttgtactacttgctgaatccataggcaagaaagagataacctggcgaactgaaaca 125079 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 125078 tcttagtagccag-aggaaaagaaagcaaaagcgattccctgagtagcggcgagcgaaac 125020 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagc 233 |||| |||||||||||| |||| ||||||||||||||||| Sbjct: 125019 gggatcagcctaaaccgcgaaagcggggttgtgggagagc 124980 Score = 222 bits (112), Expect = 1e-54 Identities = 194/220 (88%), Gaps = 1/220 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||| || || ||||||||||||| ||| ||| |||||| ||| Sbjct: 94668 gacgaaatgcttcggggagctgcgaacaagcatagatccgaagacccccgaatagggcaa 94727 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||| || ||| | |||||||||||| ||| | |||||| ||||||||||||||||||| Sbjct: 94728 cctcttgtactacttgctgaatccataggcaagaaagagataacctggcgaactgaaaca 94787 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 94788 tcttagtagccag-aggaaaagaaagcaaaagcgattccctgagtagcggcgagcgaaac 94846 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagc 233 |||| |||||||||||| |||| ||||||||||||||||| Sbjct: 94847 gggatcagcctaaaccgcgaaagcggggttgtgggagagc 94886
>dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1109A06 Length = 171438 Score = 266 bits (134), Expect = 7e-68 Identities = 140/142 (98%) Strand = Plus / Minus Query: 423 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 482 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 108050 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 107991 Query: 483 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 542 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107990 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 107931 Query: 543 gccggcgactcataggcagtgg 564 |||||||||||||||||||||| Sbjct: 107930 gccggcgactcataggcagtgg 107909
>gb|L49157.1|STXCPRGOL Stigeoclonium helveticum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 6393 Score = 252 bits (127), Expect = 1e-63 Identities = 211/236 (89%), Gaps = 6/236 (2%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 410 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 469 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 470 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 529 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 508 || | ||| ||||||||||||| ||||||||| | ||| |||||||||||| |||| Sbjct: 530 ccggaggggagtgaaatagaacatgaaaccgtcc---gctgacaagcagtggga--ggaa 584 Query: 509 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 564 | ||| ||||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 585 atagat-tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtgg 639 Score = 81.8 bits (41), Expect = 2e-12 Identities = 87/101 (86%), Gaps = 1/101 (0%) Strand = Plus / Plus Query: 108 aagagacaacctggcgaactgaaacatcttagtagccagtaggaaaagaaagcaaaagcg 167 ||||| ||||| || ||| ||||||||||||||| || | |||||||||||||||| ||| Sbjct: 148 aagaggcaacccggtgaattgaaacatcttagtaaccgg-aggaaaagaaagcaaacgcg 206 Query: 168 attcccgtagtagcggcgagcgaaatgggagcagcctaaac 208 ||| || ||||||||||||||||| || | |||||||||| Sbjct: 207 atttcctgagtagcggcgagcgaaacggaatcagcctaaac 247
>gb|L42993.1|URMCPRGOL Uronema belkae large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2619 Score = 252 bits (127), Expect = 1e-63 Identities = 211/236 (89%), Gaps = 6/236 (2%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 490 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 508 || | ||| |||||||||||||| |||||||| | ||| |||||||||||| |||| Sbjct: 491 ccggaggggagtgaaatagaacgcgaaaccgtcc---gctgacaagcagtggga--ggaa 545 Query: 509 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 564 ||| ||||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 546 gaagat-tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtgg 600 Score = 95.6 bits (48), Expect = 1e-16 Identities = 76/84 (90%), Gaps = 1/84 (1%) Strand = Plus / Plus Query: 108 aagagacaacctggcgaactgaaacatcttagtagccagtaggaaaagaaagcaaaagcg 167 ||||||||||| || ||| ||||||||||||||| || | |||||||||||||||||||| Sbjct: 140 aagagacaacccggtgaattgaaacatcttagtaaccgg-aggaaaagaaagcaaaagcg 198 Query: 168 attcccgtagtagcggcgagcgaa 191 ||| || ||||||||||||||||| Sbjct: 199 atttccttagtagcggcgagcgaa 222
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 246 bits (124), Expect = 7e-62 Identities = 213/242 (88%), Gaps = 3/242 (1%) Strand = Plus / Plus Query: 323 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 382 |||| |||||||||||||| |||||||| || | |||||||||||| |||||||||| | Sbjct: 338 ctctaacccgagtagcatgaggcacgtgaaaccttgtgtgaatcagcgaggaccacctcg 397 Query: 383 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 442 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 398 taaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaa 457 Query: 443 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 502 ||||||||| |||| ||||||||||| |||||||| | ||| |||||||||||| Sbjct: 458 gaacccccactggggagtgaaatagataatgaaaccg---taagcctacaagcagtggga 514 Query: 503 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagt 562 || || | || ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 515 ggaaaatataatttctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagt 574 Query: 563 gg 564 || Sbjct: 575 gg 576 Score = 125 bits (63), Expect = 2e-25 Identities = 88/95 (92%), Gaps = 1/95 (1%) Strand = Plus / Plus Query: 115 aacctggcgaactgaaacatcttagtagccagtaggaaaagaaagcaaaagcgattcccg 174 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 125 aacctggcgaactgaaacatcttagtagccag-aggaaaagaaagcaaaagcgatttcct 183 Query: 175 tagtagcggcgagcgaaatgggagcagcctaaacc 209 |||||| ||||||||||| || | ||||||||||| Sbjct: 184 tagtagtggcgagcgaaacggaatcagcctaaacc 218
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 242 bits (122), Expect = 1e-60 Identities = 238/276 (86%), Gaps = 3/276 (1%) Strand = Plus / Plus Query: 289 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 348 |||||||||||| |||||||| ||| ||||| ||||| |||| ||||||||||| |||| Sbjct: 4385 aaagtccagtagtcgaaagcaacacaagctttagctctaacccaagtagcatgggacacg 4444 Query: 349 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 408 | ||||| |||||||| || |||||||||| | |||||||||||||||||||| |||| Sbjct: 4445 ggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaatactcctgggtaaccg 4504 Query: 409 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 468 |||||||| ||||||||||||||||||||||||||||||||| ||| ||||||| ||| Sbjct: 4505 atagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccataggggagtgaaagaga 4564 Query: 469 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 528 || |||||||| | || |||||||||||||| ||| |||| ||||||||||| Sbjct: 4565 acatgaaaccg---taggccttcaagcagtgggaggagaattgtatctttgaccgcgtgc 4621 Query: 529 ctgttgaagaatgagccggcgactcataggcagtgg 564 |||||||||||||||||||||||||||||||||||| Sbjct: 4622 ctgttgaagaatgagccggcgactcataggcagtgg 4657 Score = 178 bits (90), Expect = 1e-41 Identities = 170/194 (87%), Gaps = 2/194 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||| ||||| | |||||||||||||||||||| ||| || || Sbjct: 4100 gacgaaatgcttcggggagtcgaaaacaggcatagatccggagattcccgaatggggtaa 4159 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 || || |||||| ||||||||||| || | |||||| ||||||| ||||||||||| Sbjct: 4160 ccccttgtactgcc-gctgaatccataggcggataagagagaacctggtgaactgaaaca 4218 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||| Sbjct: 4219 tcttagtagccag-aggaaaaaaaagcaaaagcgattccctgagtagcggcgagcgaaat 4277 Query: 194 gggagcagcctaaa 207 ||||| |||||||| Sbjct: 4278 gggagaagcctaaa 4291
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 242 bits (122), Expect = 1e-60 Identities = 238/276 (86%), Gaps = 3/276 (1%) Strand = Plus / Plus Query: 289 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 348 |||||||||||| |||||||| ||| ||||| ||||| |||| ||||||||||| |||| Sbjct: 352 aaagtccagtagtcgaaagcaacacaagctttagctctaacccaagtagcatgggacacg 411 Query: 349 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 408 | ||||| |||||||| || |||||||||| | |||||||||||||||||||| |||| Sbjct: 412 ggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaatactcctgggtaaccg 471 Query: 409 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 468 |||||||| ||||||||||||||||||||||||||||||||| ||| ||||||| ||| Sbjct: 472 atagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccataggggagtgaaagaga 531 Query: 469 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 528 || |||||||| | || |||||||||||||| ||| |||| ||||||||||| Sbjct: 532 acatgaaaccg---taggccttcaagcagtgggaggagaattgtatctttgaccgcgtgc 588 Query: 529 ctgttgaagaatgagccggcgactcataggcagtgg 564 |||||||||||||||||||||||||||||||||||| Sbjct: 589 ctgttgaagaatgagccggcgactcataggcagtgg 624 Score = 170 bits (86), Expect = 3e-39 Identities = 169/194 (87%), Gaps = 2/194 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||| ||||| | |||||||||||||||||||| ||| || || Sbjct: 67 gacgaaatgcttcggggagtcgaaaacaggcatagatccggagattcccgaatggggtaa 126 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 || || |||||| ||||||| ||| || | |||||| ||||||| ||||||||||| Sbjct: 127 ccccttgtactgcc-gctgaatacataggcggataagagagaacctggtgaactgaaaca 185 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||| Sbjct: 186 tcttagtagccag-aggaaaaaaaagcaaaagcgattccctgagtagcggcgagcgaaat 244 Query: 194 gggagcagcctaaa 207 ||||| |||||||| Sbjct: 245 gggagaagcctaaa 258
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 242 bits (122), Expect = 1e-60 Identities = 238/276 (86%), Gaps = 3/276 (1%) Strand = Plus / Plus Query: 289 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 348 |||||||||||| |||||||| ||| ||||| ||||| |||| ||||||||||| |||| Sbjct: 352 aaagtccagtagtcgaaagcaacacaagctttagctctaacccaagtagcatgggacacg 411 Query: 349 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 408 | ||||| |||||||| || |||||||||| | |||||||||||||||||||| |||| Sbjct: 412 ggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaatactcctgggtaaccg 471 Query: 409 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 468 |||||||| ||||||||||||||||||||||||||||||||| ||| ||||||| ||| Sbjct: 472 atagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccataggggagtgaaagaga 531 Query: 469 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 528 || |||||||| | || |||||||||||||| ||| |||| ||||||||||| Sbjct: 532 acatgaaaccg---taggccttcaagcagtgggaggagaattgtatctttgaccgcgtgc 588 Query: 529 ctgttgaagaatgagccggcgactcataggcagtgg 564 |||||||||||||||||||||||||||||||||||| Sbjct: 589 ctgttgaagaatgagccggcgactcataggcagtgg 624 Score = 178 bits (90), Expect = 1e-41 Identities = 170/194 (87%), Gaps = 2/194 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||| ||||| | |||||||||||||||||||| ||| || || Sbjct: 67 gacgaaatgcttcggggagtcgaaaacaggcatagatccggagattcccgaatggggtaa 126 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 || || |||||| ||||||||||| || | |||||| ||||||| ||||||||||| Sbjct: 127 ccccttgtactgcc-gctgaatccataggcggataagagagaacctggtgaactgaaaca 185 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||| Sbjct: 186 tcttagtagccag-aggaaaaaaaagcaaaagcgattccctgagtagcggcgagcgaaat 244 Query: 194 gggagcagcctaaa 207 ||||| |||||||| Sbjct: 245 gggagaagcctaaa 258
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 238 bits (120), Expect = 2e-59 Identities = 205/232 (88%), Gaps = 6/232 (2%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 398 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 457 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 458 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 517 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 508 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 518 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 574 Query: 509 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 560 | | | |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 575 a---agccctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 623 Score = 115 bits (58), Expect = 2e-22 Identities = 92/102 (90%), Gaps = 1/102 (0%) Strand = Plus / Plus Query: 109 agagacaacctggcgaactgaaacatcttagtagccagtaggaaaagaaagcaaaagcga 168 |||| |||||| | ||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 149 agaggcaacctagtgaactgaaacatcttagtagctagt-ggaaaagaaagcaaaagcga 207 Query: 169 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 210 ||||| |||||||||||||| || |||| |||||||||||| Sbjct: 208 ttccctgagtagcggcgagcggaaagggaacagcctaaaccg 249 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||| ||||||||||| || ||| |||| | |||||| |||||||| |||||| ||| Sbjct: 54 gacgaaacgcttcggggagctggaaacaagctttgatccgtagattcccgaatagggcaa 113 Query: 74 cct 76 ||| Sbjct: 114 cct 116
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 238 bits (120), Expect = 2e-59 Identities = 205/232 (88%), Gaps = 6/232 (2%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 2167 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 2226 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 2227 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 2286 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 508 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 2287 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 2343 Query: 509 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 560 | | | |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 2344 a---agccctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 2392 Score = 115 bits (58), Expect = 2e-22 Identities = 92/102 (90%), Gaps = 1/102 (0%) Strand = Plus / Plus Query: 109 agagacaacctggcgaactgaaacatcttagtagccagtaggaaaagaaagcaaaagcga 168 |||| |||||| | ||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 1915 agaggcaacctagtgaactgaaacatcttagtagctagt-ggaaaagaaagcaaaagcga 1973 Query: 169 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 210 ||||| |||||||||||||| || |||| |||||||||||| Sbjct: 1974 ttccctgagtagcggcgagcggaaagggaacagcctaaaccg 2015 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||| ||||||||||| || ||| |||| | |||||| |||||||| |||||| ||| Sbjct: 1820 gacgaaacgcttcggggagctggaaacaagctttgatccgtagattcccgaatagggcaa 1879 Query: 74 cct 76 ||| Sbjct: 1880 cct 1882
>gb|DQ160045.1| Taraxacum officinale To45-1 mRNA, partial sequence Length = 329 Score = 234 bits (118), Expect = 3e-58 Identities = 144/153 (94%) Strand = Plus / Minus Query: 257 cgaagcggttgagtgccgcaccctanatggctaaagtccagtagccgaaagcatcactag 316 |||||| || || ||| |||||||| ||||| |||||||||||||||||||||||||||| Sbjct: 329 cgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 270 Query: 317 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 376 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 cttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 210 Query: 377 accttgcaaggctaaatactcctgggtgaccga 409 |||||||||||||||||||||||| | |||||| Sbjct: 209 accttgcaaggctaaatactcctgcgggaccga 177
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 234 bits (118), Expect = 3e-58 Identities = 207/236 (87%), Gaps = 3/236 (1%) Strand = Plus / Plus Query: 322 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 381 ||||| |||| ||||||||||| |||||| ||||||||||||||| || |||||||||| Sbjct: 380 gctctaacccaagtagcatgggacacgtgaaatcccgtgtgaatctgcgaggaccacctc 439 Query: 382 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 441 ||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 440 gcaaggctaaatacttctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaa 499 Query: 442 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 501 |||||||||| ||| ||||||| ||||| |||||||| | ||| ||||||||||| Sbjct: 500 agaacccccataggggagtgaaaaagaacatgaaaccg---taggctttcaagcagtggg 556 Query: 502 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 557 || ||| | |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 557 agaagaattttatctttgaccgcgtgcctgttgaagaatgagccggcgactcatag 612 Score = 149 bits (75), Expect = 1e-32 Identities = 168/195 (86%), Gaps = 3/195 (1%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||| |||||||||||| ||||| | | ||||||||||||||||| ||| || || Sbjct: 67 gacgaaacgcttcggggagtcgaaaacagacgtagatccggagattcccgaatggggtaa 126 Query: 74 cct-tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 132 || ||| |||||| ||||||| ||| ||| | |||||||||||||| |||||||||| Sbjct: 127 cccctttgtactgcc-gctgaattcataagcggataagagacaacctggtgaactgaaac 185 Query: 133 atcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 192 ||||||||| |||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 186 atcttagtaaccag-aggaaaagaaagcaaaagcgatttcctgagtagcggcgagcgaaa 244 Query: 193 tgggagcagcctaaa 207 |||||| |||||||| Sbjct: 245 tgggagaagcctaaa 259
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 232 bits (117), Expect = 1e-57 Identities = 120/121 (99%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19434040 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 19433981 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19433980 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 19433921 Query: 134 t 134 | Sbjct: 19433920 t 19433920 Score = 83.8 bits (42), Expect = 6e-13 Identities = 42/42 (100%) Strand = Plus / Minus Query: 503 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 544 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 12182494 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 12182453 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 421 taccgtgagggaaaggtgaaaagaacc 447 |||||||||||||||||||||| |||| Sbjct: 14553517 taccgtgagggaaaggtgaaaataacc 14553543
>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476H10 Length = 151703 Score = 232 bits (117), Expect = 1e-57 Identities = 120/121 (99%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51567 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 51508 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51507 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 51448 Query: 134 t 134 | Sbjct: 51447 t 51447
>dbj|AP004879.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0475F05 Length = 147522 Score = 232 bits (117), Expect = 1e-57 Identities = 120/121 (99%) Strand = Plus / Minus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119531 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 119472 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119471 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 119412 Query: 134 t 134 | Sbjct: 119411 t 119411
>emb|AJ535053.1|OSA535053 Oryza sativa (japonica cultivar-group) pdr2 gene for PDR-like ABC transporter, exons 1-22 Length = 15112 Score = 232 bits (117), Expect = 1e-57 Identities = 120/121 (99%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6091 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 6150 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6151 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 6210 Query: 134 t 134 | Sbjct: 6211 t 6211
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 228 bits (115), Expect = 2e-56 Identities = 198/224 (88%), Gaps = 5/224 (2%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 376 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 435 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 || |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 436 tacatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 495 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 508 || ||| ||||||| ||| | |||||||| || ||| |||||||||||||||| Sbjct: 496 ccgcaggggagtgaaaaagatcatgaaaccg---tgtgcttacaagcagtgggagggg-- 550 Query: 509 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 552 ||| | |||||||||||||||||||||||||||||||||||| Sbjct: 551 cctgagccctgaccgcgtgcctgttgaagaatgagccggcgact 594 Score = 129 bits (65), Expect = 1e-26 Identities = 156/185 (84%), Gaps = 1/185 (0%) Strand = Plus / Plus Query: 26 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 85 ||||||| || || ||||| | ||||||||||||||| ||| || |||||| ||| Sbjct: 66 cggggagctggaagtaagcttcgatccggagattcccgaatggggcaacctcaaggactc 125 Query: 86 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 145 |||||||||| ||| ||||| |||| |||| || |||||||||||||||||||||| Sbjct: 126 cctgctgaattcataggcagggtagaggaaacccggtgaactgaaacatcttagtagccg 185 Query: 146 gtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagccta 205 | |||||||||||||||| ||||||||| |||||||||||||||||| |||| ||||||| Sbjct: 186 g-aggaaaagaaagcaaacgcgattcccttagtagcggcgagcgaaacgggaccagccta 244 Query: 206 aaccg 210 ||||| Sbjct: 245 aaccg 249
>dbj|AK059621.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-H01, full insert sequence Length = 1729 Score = 228 bits (115), Expect = 2e-56 Identities = 118/119 (99%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1611 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 1670 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 132 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1671 ccttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 1729
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 226 bits (114), Expect = 6e-56 Identities = 168/186 (90%) Strand = Plus / Plus Query: 291 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 350 |||||||||| |||| |||| ||||||||||| |||| ||||||||||||| |||||| Sbjct: 347 agtccagtagtataaagtatcattagcttatgctttgactcgagtagcatgggacacgtg 406 Query: 351 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 410 |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| || Sbjct: 407 gaatcccgtgtgaatcagcaaggatcaccttgcaaggctaaatactcttgggtgaccaat 466 Query: 411 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 470 || |||||||||||||||||||| ||||||||||||| | | |||| ||||||||||||| Sbjct: 467 agtgaagtagtaccgtgagggaagggtgaaaagaacctctactggggagtgaaatagaac 526 Query: 471 gtgaaa 476 ||||| Sbjct: 527 atgaaa 532 Score = 159 bits (80), Expect = 1e-35 Identities = 180/208 (86%), Gaps = 4/208 (1%) Strand = Plus / Plus Query: 17 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 76 |||||||||||||||||| ||||||| ||||||||||||||||||| ||||||| ||||| Sbjct: 68 gaaatgcttcggggagttaaaaataaacatagatccggagattcccgaataggtaaacct 127 Query: 77 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 136 || |||||| ||||| | |||||| |||| ||| ||| ||||||| |||||||| ||||| Sbjct: 128 ttaaaactg-ctgcttattccatg-gcagacaaaaga-aacctggtgaactgaatcatct 184 Query: 137 tagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 196 |||||| ||| ||||||| |||||||||| ||| || |||||| |||||| |||| ||| Sbjct: 185 tagtagacag-aggaaaataaagcaaaagttattaccatagtagtggcgagtgaaaaggg 243 Query: 197 agcagcctaaaccgtgaaaacggggttg 224 | |||||||||||| |||| ||||||| Sbjct: 244 aacagcctaaaccgctaaaatggggttg 271 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 556 ||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 566 ctctgactgcgttcctgttgaagaatgagccggcgactcata 607
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 220 bits (111), Expect = 4e-54 Identities = 206/237 (86%), Gaps = 3/237 (1%) Strand = Plus / Plus Query: 328 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 387 |||||||||||||| |||||||| || | ||||||||||||| |||||||||| | |||| Sbjct: 784 acccgagtagcatgaggcacgtgaaacctcgtgtgaatcagcgaggaccacctcgtaagg 843 Query: 388 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 447 |||||||||||| ||||| |||||| |||| ||||||||||||||||||||||||||||| Sbjct: 844 ctaaatactcctaggtgatcgatagtgaagaagtaccgtgagggaaaggtgaaaagaacc 903 Query: 448 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 507 |||| ||| ||||||||||| |||||||| | |||| ||||||||||||| || Sbjct: 904 cccataggggagtgaaatagactatgaaaccg---taagcttacaagcagtgggagaaga 960 Query: 508 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 564 | | |||| ||||||||||||||||||||||||||||||||||| ||| ||||||| Sbjct: 961 atctaatctttgaccgcgtgcctgttgaagaatgagccggcgacttataagcagtgg 1017 Score = 153 bits (77), Expect = 7e-34 Identities = 142/161 (88%), Gaps = 2/161 (1%) Strand = Plus / Plus Query: 51 ccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaag 110 |||||||||||| |||||| |||||| | ||||||| |||||||| ||| || | ||| Sbjct: 505 ccggagattcccgaatagggcaacctgt-aaactgcttgctgaattcataggcgagtaag 563 Query: 111 agacaacctggcgaactgaaacatcttagtagccagtaggaaaagaaagcaaaagcgatt 170 ||||||||||| ||||||||||||||||||| |||| ||||| ||||||||||||||||| Sbjct: 564 agacaacctggtgaactgaaacatcttagtaaccag-aggaacagaaagcaaaagcgatt 622 Query: 171 cccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 211 ||| |||||| ||||||||||| |||| ||||||||||||| Sbjct: 623 cccttagtagtggcgagcgaaacgggaacagcctaaaccgt 663
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 291 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 350 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 351 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 410 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 411 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 470 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 471 gtgaaa 476 ||||| Sbjct: 504 atgaaa 509 Score = 133 bits (67), Expect = 7e-28 Identities = 165/191 (86%), Gaps = 5/191 (2%) Strand = Plus / Plus Query: 17 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 75 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 76 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 135 ||| |||||| ||||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactg-ctgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 136 ttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 195 |||||| |||| ||||||| |||||||||| |||||| |||||| ||||| ||||| || Sbjct: 185 ttagtatccag-aggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaagg 243 Query: 196 gagcagcctaa 206 || || ||||| Sbjct: 244 gaacaacctaa 254 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 556 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 291 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 350 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 351 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 410 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 411 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 470 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 471 gtgaaa 476 ||||| Sbjct: 503 atgaaa 508 Score = 133 bits (67), Expect = 7e-28 Identities = 165/191 (86%), Gaps = 5/191 (2%) Strand = Plus / Plus Query: 17 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 75 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 76 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 135 ||| |||||| ||||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactg-ctgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 136 ttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 195 |||||| |||| ||||||| |||||||||| |||||| |||||| ||||| ||||| || Sbjct: 185 ttagtatccag-aggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaagg 243 Query: 196 gagcagcctaa 206 || || ||||| Sbjct: 244 gaacaacctaa 254 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 556 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 582
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 291 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 350 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 351 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 410 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 411 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 470 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 471 gtgaaa 476 ||||| Sbjct: 504 atgaaa 509 Score = 133 bits (67), Expect = 7e-28 Identities = 165/191 (86%), Gaps = 5/191 (2%) Strand = Plus / Plus Query: 17 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 75 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 76 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 135 ||| |||||| ||||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactg-ctgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 136 ttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 195 |||||| |||| ||||||| |||||||||| |||||| |||||| ||||| ||||| || Sbjct: 185 ttagtatccag-aggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaagg 243 Query: 196 gagcagcctaa 206 || || ||||| Sbjct: 244 gaacaacctaa 254 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 556 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 291 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 350 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 351 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 410 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 411 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 470 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 471 gtgaaa 476 ||||| Sbjct: 504 atgaaa 509 Score = 133 bits (67), Expect = 7e-28 Identities = 165/191 (86%), Gaps = 5/191 (2%) Strand = Plus / Plus Query: 17 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 75 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 76 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 135 ||| |||||| ||||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactg-ctgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 136 ttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 195 |||||| |||| ||||||| |||||||||| |||||| |||||| ||||| ||||| || Sbjct: 185 ttagtatccag-aggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaagg 243 Query: 196 gagcagcctaa 206 || || ||||| Sbjct: 244 gaacaacctaa 254 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 556 |||||||| ||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccacgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 291 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 350 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 351 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 410 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 411 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 470 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 471 gtgaaa 476 ||||| Sbjct: 504 atgaaa 509 Score = 133 bits (67), Expect = 7e-28 Identities = 165/191 (86%), Gaps = 5/191 (2%) Strand = Plus / Plus Query: 17 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 75 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 76 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 135 ||| |||||| ||||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactg-ctgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 136 ttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 195 |||||| |||| ||||||| |||||||||| |||||| |||||| ||||| ||||| || Sbjct: 185 ttagtatccag-aggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaagg 243 Query: 196 gagcagcctaa 206 || || ||||| Sbjct: 244 gaacaacctaa 254 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 556 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 291 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 350 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 351 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 410 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 411 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 470 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 471 gtgaaa 476 ||||| Sbjct: 504 atgaaa 509 Score = 133 bits (67), Expect = 7e-28 Identities = 159/183 (86%), Gaps = 5/183 (2%) Strand = Plus / Plus Query: 17 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 75 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 76 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 135 ||| |||||| ||||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactg-ctgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 136 ttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 195 |||||| |||| ||||||| |||||||||| |||||| |||||| ||||| ||||| || Sbjct: 185 ttagtatccag-aggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaagg 243 Query: 196 gag 198 ||| Sbjct: 244 gag 246 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 556 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 291 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 350 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 351 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 410 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 411 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 470 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 471 gtgaaa 476 ||||| Sbjct: 503 atgaaa 508 Score = 133 bits (67), Expect = 7e-28 Identities = 165/191 (86%), Gaps = 5/191 (2%) Strand = Plus / Plus Query: 17 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 75 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 76 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 135 ||| |||||| ||||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactg-ctgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 136 ttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 195 |||||| |||| ||||||| |||||||||| |||||| |||||| ||||| ||||| || Sbjct: 185 ttagtatccag-aggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaagg 243 Query: 196 gagcagcctaa 206 || || ||||| Sbjct: 244 gaacaacctaa 254 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 556 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 582
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 291 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 350 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 351 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 410 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 411 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 470 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 471 gtgaaa 476 ||||| Sbjct: 504 atgaaa 509 Score = 133 bits (67), Expect = 7e-28 Identities = 165/191 (86%), Gaps = 5/191 (2%) Strand = Plus / Plus Query: 17 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 75 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 76 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 135 ||| |||||| ||||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactg-ctgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 136 ttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 195 |||||| |||| ||||||| |||||||||| |||||| |||||| ||||| ||||| || Sbjct: 185 ttagtatccag-aggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaagg 243 Query: 196 gagcagcctaa 206 || || ||||| Sbjct: 244 gaacaacctaa 254 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 556 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 291 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 350 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 351 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 410 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 411 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 470 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 471 gtgaaa 476 ||||| Sbjct: 504 atgaaa 509 Score = 133 bits (67), Expect = 7e-28 Identities = 165/191 (86%), Gaps = 5/191 (2%) Strand = Plus / Plus Query: 17 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 75 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 76 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 135 ||| |||||| ||||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactg-ctgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 136 ttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 195 |||||| |||| ||||||| |||||||||| |||||| |||||| ||||| ||||| || Sbjct: 185 ttagtatccag-aggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaagg 243 Query: 196 gagcagcctaa 206 || || ||||| Sbjct: 244 gaacaacctaa 254 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 556 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 291 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 350 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 351 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 410 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 411 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 470 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 471 gtgaaa 476 ||||| Sbjct: 504 atgaaa 509 Score = 133 bits (67), Expect = 7e-28 Identities = 165/191 (86%), Gaps = 5/191 (2%) Strand = Plus / Plus Query: 17 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 75 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 76 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 135 ||| |||||| ||||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactg-ctgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 136 ttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 195 |||||| |||| ||||||| |||||||||| |||||| |||||| ||||| ||||| || Sbjct: 185 ttagtatccag-aggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaagg 243 Query: 196 gagcagcctaa 206 || || ||||| Sbjct: 244 gaacaacctaa 254 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 556 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 291 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 350 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 351 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 410 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 411 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 470 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 471 gtgaaa 476 ||||| Sbjct: 504 atgaaa 509 Score = 141 bits (71), Expect = 3e-30 Identities = 166/191 (86%), Gaps = 5/191 (2%) Strand = Plus / Plus Query: 17 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 75 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 76 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 135 ||| |||||| ||||| | |||||| | || ||||||| |||| |||||||||||||||| Sbjct: 128 tttaaaactg-ctgcttattccatg-gaagacaagaga-aacccggcgaactgaaacatc 184 Query: 136 ttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 195 |||||| |||| ||||||| |||||||||| |||||| |||||| ||||| ||||| || Sbjct: 185 ttagtatccag-aggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaagg 243 Query: 196 gagcagcctaa 206 || || ||||| Sbjct: 244 gaacaacctaa 254 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 556 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 291 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 350 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 351 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 410 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 411 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 470 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 471 gtgaaa 476 ||||| Sbjct: 504 atgaaa 509 Score = 133 bits (67), Expect = 7e-28 Identities = 165/191 (86%), Gaps = 5/191 (2%) Strand = Plus / Plus Query: 17 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 75 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 76 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 135 ||| |||||| ||||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactg-ctgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 136 ttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 195 |||||| |||| ||||||| |||||||||| |||||| |||||| ||||| ||||| || Sbjct: 185 ttagtatccag-aggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaagg 243 Query: 196 gagcagcctaa 206 || || ||||| Sbjct: 244 gaacaacctaa 254 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 556 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 291 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 350 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 351 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 410 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 411 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 470 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 471 gtgaaa 476 ||||| Sbjct: 504 atgaaa 509 Score = 133 bits (67), Expect = 7e-28 Identities = 165/191 (86%), Gaps = 5/191 (2%) Strand = Plus / Plus Query: 17 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 75 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 76 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 135 ||| |||||| ||||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactg-ctgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 136 ttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 195 |||||| |||| ||||||| |||||||||| |||||| |||||| ||||| ||||| || Sbjct: 185 ttagtatccag-aggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaagg 243 Query: 196 gagcagcctaa 206 || || ||||| Sbjct: 244 gaacaacctaa 254 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 556 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 291 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 350 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 351 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 410 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 411 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 470 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 471 gtgaaa 476 ||||| Sbjct: 504 atgaaa 509 Score = 133 bits (67), Expect = 7e-28 Identities = 165/191 (86%), Gaps = 5/191 (2%) Strand = Plus / Plus Query: 17 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 75 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 76 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 135 ||| |||||| ||||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactg-ctgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 136 ttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 195 |||||| |||| ||||||| |||||||||| |||||| |||||| ||||| ||||| || Sbjct: 185 ttagtatccag-aggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaagg 243 Query: 196 gagcagcctaa 206 || || ||||| Sbjct: 244 gaacaacctaa 254 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 556 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 291 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 350 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 351 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 410 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 411 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 470 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 471 gtgaaa 476 ||||| Sbjct: 504 atgaaa 509 Score = 133 bits (67), Expect = 7e-28 Identities = 165/191 (86%), Gaps = 5/191 (2%) Strand = Plus / Plus Query: 17 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 75 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 76 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 135 ||| |||||| ||||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactg-ctgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 136 ttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 195 |||||| |||| ||||||| |||||||||| |||||| |||||| ||||| ||||| || Sbjct: 185 ttagtatccag-aggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaagg 243 Query: 196 gagcagcctaa 206 || || ||||| Sbjct: 244 gaacaacctaa 254 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 556 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 216 bits (109), Expect = 6e-53 Identities = 199/226 (88%), Gaps = 6/226 (2%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 355 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 414 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa-gaacc 447 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 415 taaatactcctgggtaaccgatagtgaagtagtaccgtgagggaaaggtgaaaaagaacc 474 Query: 448 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 507 || | ||| ||||||| ||||| ||||||| || |||| |||||||||||| ||| Sbjct: 475 cctggaggggagtgaaaaagaacatgaaacc---ctaagctgacaagcagtggga--gga 529 Query: 508 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 | | |||||||||||||||||||||||||||||||||||||| Sbjct: 530 cttttaagtctgaccgcgtgcctgttgaagaatgagccggcgactc 575 Score = 109 bits (55), Expect = 1e-20 Identities = 86/95 (90%), Gaps = 1/95 (1%) Strand = Plus / Plus Query: 114 caacctggcgaactgaaacatcttagtagccagtaggaaaagaaagcaaaagcgattccc 173 ||||| || ||| |||||||||||||||||| | |||||||||||||||| ||||||||| Sbjct: 64 caacccggtgaattgaaacatcttagtagccgg-aggaaaagaaagcaaacgcgattccc 122 Query: 174 gtagtagcggcgagcgaaatgggagcagcctaaac 208 |||||||||||||||||| |||| |||||||||| Sbjct: 123 ctagtagcggcgagcgaaaagggaacagcctaaac 157
>gb|L49155.1|NEHCPRGOLA Neochloris aquatica chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5569 Score = 212 bits (107), Expect = 9e-52 Identities = 196/224 (87%), Gaps = 5/224 (2%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||| | Sbjct: 517 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagac 576 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||| | ||||||||||||| |||||| | || ||||||||||||||||||| Sbjct: 577 taaatactcctgagagaccgatagcgaaatagtacagcgatggaaaggtgaaaagaaccc 636 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 508 || ||| ||||||||||||| ||||| || |||||| |||||||||||| ||| Sbjct: 637 ccgtaggggagtgaaatagaacatgaaatcg---tgagctgacaagcagtggga--ggat 691 Query: 509 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 552 ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 692 tttgaaatctgaccgcgtgcctgttgaagaatgagccggcgact 735 Score = 115 bits (58), Expect = 2e-22 Identities = 83/90 (92%), Gaps = 1/90 (1%) Strand = Plus / Plus Query: 108 aagagacaacctggcgaactgaaacatcttagtagccagtaggaaaagaaagcaaaagcg 167 ||||| |||||||| |||||||||||||| ||||||||| |||| ||||| ||||||||| Sbjct: 148 aagaggcaacctggtgaactgaaacatctcagtagccag-aggagaagaacgcaaaagcg 206 Query: 168 attcccgtagtagcggcgagcgaaatggga 197 |||||| ||||||||||||||||||||||| Sbjct: 207 attcccttagtagcggcgagcgaaatggga 236
>gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2920 Score = 212 bits (107), Expect = 9e-52 Identities = 140/151 (92%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 601 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 660 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||| Sbjct: 661 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtaaaaagaaccc 720 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccg 479 || |||| ||||||||||||| |||||||| Sbjct: 721 ccgttggggagtgaaatagaacatgaaaccg 751 Score = 135 bits (68), Expect = 2e-28 Identities = 165/196 (84%), Gaps = 1/196 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||| ||||||||||| || ||||||| | |||||| |||| ||| |||||| ||| Sbjct: 46 gacgaaacgcttcggggagctggcaataagcgttgatccgaagatccccgaatagggcaa 105 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||| |||| ||| | ||| ||| || |||||||||| |||| || ||||||||||| Sbjct: 106 cctcaagaactacctccctaattcataaggaggcaagagagaacccggtgaactgaaaca 165 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||| ||||||| | |||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 166 tctaagtagccgg-aggaaaagaaagcaaacgcgattcccatagtagcggcgagcgaaaa 224 Query: 194 gggagcagcctaaacc 209 |||| ||||||||||| Sbjct: 225 gggaacagcctaaacc 240 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 517 ctgaccgcgtgcctgttgaagaatgagccggcgact 552 |||||||||||||||||||||||||||||||||||| Sbjct: 796 ctgaccgcgtgcctgttgaagaatgagccggcgact 831
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 210 bits (106), Expect = 4e-51 Identities = 166/186 (89%) Strand = Plus / Plus Query: 291 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 350 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 351 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 410 ||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccatgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 411 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 470 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 471 gtgaaa 476 ||||| Sbjct: 504 atgaaa 509 Score = 133 bits (67), Expect = 7e-28 Identities = 159/183 (86%), Gaps = 5/183 (2%) Strand = Plus / Plus Query: 17 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 75 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 76 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 135 ||| |||||| ||||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactg-ctgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 136 ttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 195 |||||| |||| ||||||| |||||||||| |||||| |||||| ||||| ||||| || Sbjct: 185 ttagtatccag-aggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaagg 243 Query: 196 gag 198 ||| Sbjct: 244 gag 246 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 556 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 210 bits (106), Expect = 4e-51 Identities = 201/232 (86%), Gaps = 3/232 (1%) Strand = Plus / Plus Query: 333 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 392 ||||| ||||| |||||| |||||| | |||||| |||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatctacaaggaccaccttgtaaggctaaa 444 Query: 393 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 452 |||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgcgagggaaaggtgaaaagaacccccat 504 Query: 453 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 512 ||| ||||||||||||| ||||||| | |||| |||||||||||||| | | Sbjct: 505 aggggagtgaaatagaacatgaaacc---ataagctttcaagcagtgggaggaggattga 561 Query: 513 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 564 | || ||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 562 acctttgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtgg 613 Score = 159 bits (80), Expect = 1e-35 Identities = 183/216 (84%), Gaps = 1/216 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||| || || ||||||| ||||| |||||||| |||||| || Sbjct: 67 gacgaaatgcttcggggagctgcgaacaagcataaatccgaagattcccgaatagggtaa 126 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||| || ||| |||| |||| || | |||| ||||| ||||| | ||||||||||| Sbjct: 127 cctcttgtactacctgtagaattaataatcaggttagagaaaacctagtgaactgaaaca 186 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 |||||||||| || |||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 187 tcttagtagctag-aggaaaagaaagcaaaagcgattccctcagtagtggcgagcgaaac 245 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtggga 229 |||| |||||||||||| |||| ||||||||||||| Sbjct: 246 gggaacagcctaaaccgcgaaagcggggttgtggga 281
>gb|L43500.1|RTCCPRRNL Carteria olivieri Length = 5667 Score = 206 bits (104), Expect = 6e-50 Identities = 140/152 (92%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 691 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 750 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||||||||||||||||||| |||||||| ||||||| ||| |||||||||| Sbjct: 751 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaagggtaaaaagaaccc 810 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgt 480 || |||| ||||||||||||| ||||||||| Sbjct: 811 ccgttggggagtgaaatagaacatgaaaccgt 842 Score = 131 bits (66), Expect = 3e-27 Identities = 97/106 (91%), Gaps = 1/106 (0%) Strand = Plus / Plus Query: 104 aggcaagagacaacctggcgaactgaaacatcttagtagccagtaggaaaagaaagcaaa 163 |||||||||| |||| || |||||||||||||| ||||||| | |||||||||||||||| Sbjct: 137 aggcaagagagaacccggtgaactgaaacatctaagtagccgg-aggaaaagaaagcaaa 195 Query: 164 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 209 |||||||||| |||||||||||||||||| |||| ||||||||||| Sbjct: 196 agcgattcccttagtagcggcgagcgaaaagggaacagcctaaacc 241 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 517 ctgaccgcgtgcctgttgaagaatgagccggcgact 552 |||||||||||||||||||||||||||||||||||| Sbjct: 895 ctgaccgcgtgcctgttgaagaatgagccggcgact 930
>gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CelI gene Length = 3779 Score = 206 bits (104), Expect = 6e-50 Identities = 142/152 (93%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 409 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 468 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 469 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 528 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgt 480 || || || ||||||||||||| ||||||||| Sbjct: 529 cc-gtagg-agtgaaatagaacatgaaaccgt 558 Score = 109 bits (55), Expect = 1e-20 Identities = 77/83 (92%), Gaps = 1/83 (1%) Strand = Plus / Plus Query: 127 tgaaacatcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcga 186 ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 164 tgaaacatcttagtagctgg-aggaaaagaaagcaaaagcgattcccgtagtagcggcga 222 Query: 187 gcgaaatgggagcagcctaaacc 209 ||||| |||| ||||||||||| Sbjct: 223 gcgaaccgggaacagcctaaacc 245 Score = 73.8 bits (37), Expect = 5e-10 Identities = 37/37 (100%) Strand = Plus / Plus Query: 516 tctgaccgcgtgcctgttgaagaatgagccggcgact 552 ||||||||||||||||||||||||||||||||||||| Sbjct: 585 tctgaccgcgtgcctgttgaagaatgagccggcgact 621
>gb|L42859.1|CRECPRGOL Chlamydomonas mutabilis chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmuI gene Length = 3744 Score = 206 bits (104), Expect = 6e-50 Identities = 207/238 (86%), Gaps = 10/238 (4%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||| |||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 436 cccgagtagcatggaacacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 495 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||| ||||||||||||||||||||| |||||| | || |||||||||||||| |||| Sbjct: 496 taaatattcctgggtgaccgatagcgaaatagtactgcgaaggaaaggtgaaaagtaccc 555 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagggg 506 || |||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 556 ccgttggggagtgaaatagaacatgaaaccgtttgctga-----caagcagtgggagggt 610 Query: 507 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 564 | | || | |||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 611 aca--gaac-ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtgg 665 Score = 93.7 bits (47), Expect = 6e-16 Identities = 78/87 (89%), Gaps = 1/87 (1%) Strand = Plus / Plus Query: 123 gaactgaaacatcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcg 182 |||||||||||||| |||||| | |||||||||||||||| |||||||||||||||| | Sbjct: 157 gaactgaaacatctaagtagctgg-aggaaaagaaagcaaacgcgattcccgtagtagtg 215 Query: 183 gcgagcgaaatgggagcagcctaaacc 209 ||||||||| |||| ||||||||||| Sbjct: 216 gcgagcgaaccgggaacagcctaaacc 242
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 202 bits (102), Expect = 9e-49 Identities = 117/122 (95%) Strand = Plus / Plus Query: 328 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 387 ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 373 acccgagtagcatggggcacgtgaaatcccgtgtgaatccgcaaggaccaccttgcaagg 432 Query: 388 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 447 |||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 433 ctaaatactcctagatgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 492 Query: 448 cc 449 || Sbjct: 493 cc 494 Score = 145 bits (73), Expect = 2e-31 Identities = 98/105 (93%), Gaps = 1/105 (0%) Strand = Plus / Plus Query: 106 gcaagagacaacctggcgaactgaaacatcttagtagccagtaggaaaagaaagcaaaag 165 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | Sbjct: 147 gcaagagacaacctggcgaactgaaacatcttagtagccag-aggaaaagaaagcaaacg 205 Query: 166 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 210 |||||||| ||||||||||||||||| |||| ||||||||||| Sbjct: 206 cgattcccttagtagcggcgagcgaagcgggaatagcctaaaccg 250 Score = 83.8 bits (42), Expect = 6e-13 Identities = 45/46 (97%) Strand = Plus / Plus Query: 519 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 564 |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 562 gaccgcgtgcctgttgaagaatgagccggcgacttataggcagtgg 607 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagat 58 |||||||||||||||||||||| ||| | || |||||||||||| Sbjct: 67 gacgaaatgcttcggggagttggaaagaggctgagatccggagat 111
>dbj|AP006444.1| Brassica napus mitochondrial DNA, complete genome Length = 221853 Score = 202 bits (102), Expect = 9e-49 Identities = 137/146 (93%), Gaps = 2/146 (1%) Strand = Plus / Minus Query: 18 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 77 ||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||| Sbjct: 89811 aaatgcttcggggagttgaaaataagcgtagatccggagattccggaataggttaacctt 89752 Query: 78 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 137 || |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 89751 ttgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 89693 Query: 138 agtagccagtaggaaaagaaagcaaa 163 | ||||||| |||||||||||||||| Sbjct: 89692 actagccag-aggaaaagaaagcaaa 89668 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 403 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 120438 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 120483
>gb|AC172860.1| Brassica rapa subsp. pekinensis clone KBrB042G11, complete sequence Length = 124347 Score = 202 bits (102), Expect = 9e-49 Identities = 137/146 (93%), Gaps = 2/146 (1%) Strand = Plus / Plus Query: 18 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 77 ||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||| Sbjct: 459 aaatgcttcggggagttgaaaataagcgtagatccggagattccggaataggttaacctt 518 Query: 78 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 137 || |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 519 ttgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 577 Query: 138 agtagccagtaggaaaagaaagcaaa 163 | ||||||| |||||||||||||||| Sbjct: 578 actagccag-aggaaaagaaagcaaa 602 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 403 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 42056 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 42101
>emb|X52737.1|CHCO23S Coleochaete orbicularis chloroplast DNA for transfer RNA-Ala, transfer RNA-Ile and 23S ribosomal RNA Length = 2305 Score = 202 bits (102), Expect = 9e-49 Identities = 135/146 (92%) Strand = Plus / Plus Query: 333 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 392 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 2152 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 2211 Query: 393 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 452 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2212 tactcctgggtgaccgatagcgaagaagtaccgtgagggaaaggtgaaaagaacccccat 2271 Query: 453 tgggtagtgaaatagaacgtgaaacc 478 ||| ||||||||||||| ||||||| Sbjct: 2272 aggggagtgaaatagaacatgaaacc 2297 Score = 135 bits (68), Expect = 2e-28 Identities = 180/216 (83%), Gaps = 1/216 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||| || || ||| ||| ||||| |||||||| |||||| || Sbjct: 1834 gacgaaatgcttcggggagctgcgaacaagtataaatccgaagattcccgaatagggtaa 1893 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||| || ||| |||| |||| || | |||| ||||| ||||| | ||||||||||| Sbjct: 1894 cctcttgtactacctgtataatcaataatcaggttagagaaaacctagtgaactgaaaca 1953 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 |||||||||| || ||||| | |||||||||||||||||| |||||| ||||||||||| Sbjct: 1954 tcttagtagctag-aggaataaaaagcaaaagcgattcccttagtagtggcgagcgaaac 2012 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtggga 229 |||| | ||||||||||| ||| ||||||||||||| Sbjct: 2013 gggaaccgcctaaaccgttaaagcggggttgtggga 2048
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 558 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 617 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 618 taaatactcctgggtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaacct 677 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgt 480 | | | ||||||||||||| ||||||||| Sbjct: 678 ctgaagaggagtgaaatagaacatgaaaccgt 709 Score = 117 bits (59), Expect = 4e-23 Identities = 78/83 (93%), Gaps = 1/83 (1%) Strand = Plus / Plus Query: 127 tgaaacatcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcga 186 |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 160 tgaaacatcttagtagccgg-aggaaaagaaagcaaaagcgattcccgtagtagcggcga 218 Query: 187 gcgaaatgggagcagcctaaacc 209 ||||| ||||| |||||||||| Sbjct: 219 gcgaactgggactagcctaaacc 241 Score = 79.8 bits (40), Expect = 9e-12 Identities = 46/48 (95%) Strand = Plus / Plus Query: 517 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 564 |||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 745 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtgg 792
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgt 480 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 99.6 bits (50), Expect = 1e-17 Identities = 78/86 (90%), Gaps = 1/86 (1%) Strand = Plus / Plus Query: 123 gaactgaaacatcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcg 182 |||||||||||||| |||||| | |||||||||||||||| |||||||||||||||| | Sbjct: 175 gaactgaaacatctaagtagctgg-aggaaaagaaagcaaacgcgattcccgtagtagtg 233 Query: 183 gcgagcgaaatgggagcagcctaaac 208 ||||||||| ||||| |||||||||| Sbjct: 234 gcgagcgaactgggaacagcctaaac 259 Score = 77.8 bits (39), Expect = 4e-11 Identities = 45/47 (95%) Strand = Plus / Plus Query: 518 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 564 ||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtgg 627 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Plus Query: 22 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 76 ||||||||||| || || |||| | |||||| ||||||||||||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccgaagattcccaaatagggcaacct 127
>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4038 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgt 480 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 101 bits (51), Expect = 2e-18 Identities = 79/87 (90%), Gaps = 1/87 (1%) Strand = Plus / Plus Query: 123 gaactgaaacatcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcg 182 |||||||||||||| |||||| | |||||||||||||||| |||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctgg-aggaaaagaaagcaaacgcgattcccgtagtagcg 233 Query: 183 gcgagcgaaatgggagcagcctaaacc 209 ||||||||| |||| ||||||||||| Sbjct: 234 gcgagcgaaccgggaacagcctaaacc 260 Score = 77.8 bits (39), Expect = 4e-11 Identities = 45/47 (95%) Strand = Plus / Plus Query: 518 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 564 ||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtgg 681 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Plus Query: 22 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 76 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacct 127
>gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3978 Score = 198 bits (100), Expect = 1e-47 Identities = 141/152 (92%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 412 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 471 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||| ||||||||||| ||| |||||||| |||||||||||||||||||||| Sbjct: 472 taaatactcctgagtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaagaaccc 531 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgt 480 || || || ||||||||||||| ||||||||| Sbjct: 532 cc-gtagg-agtgaaatagaacatgaaaccgt 561 Score = 109 bits (55), Expect = 1e-20 Identities = 77/83 (92%), Gaps = 1/83 (1%) Strand = Plus / Plus Query: 127 tgaaacatcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcga 186 ||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctgg-aggaaaataaagcaaaagcgattcccgtagtagcggcga 217 Query: 187 gcgaaatgggagcagcctaaacc 209 |||||| |||| ||||||||||| Sbjct: 218 gcgaaacgggaacagcctaaacc 240 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 517 ctgaccgcgtgcctgttgaagaatgagccggcgact 552 |||||||||||||||||||||||||||||||||||| Sbjct: 593 ctgaccgcgtgcctgttgaagaatgagccggcgact 628
>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome Length = 203828 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Minus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 151990 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 151931 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 151930 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 151871 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgt 480 | |||| ||||||||||||| ||||||||| Sbjct: 151870 ctgttggggagtgaaatagaacatgaaaccgt 151839 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 42213 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 42272 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 42273 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 42332 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgt 480 | |||| ||||||||||||| ||||||||| Sbjct: 42333 ctgttggggagtgaaatagaacatgaaaccgt 42364 Score = 101 bits (51), Expect = 2e-18 Identities = 79/87 (90%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 123 gaactgaaacatcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcg 182 |||||||||||||| |||||| | |||||||||||||||| |||||||||||||||||| Sbjct: 152206 gaactgaaacatctaagtagctgg-aggaaaagaaagcaaacgcgattcccgtagtagcg 152148 Query: 183 gcgagcgaaatgggagcagcctaaacc 209 ||||||||| |||| ||||||||||| Sbjct: 152147 gcgagcgaaccgggaacagcctaaacc 152121 Score = 101 bits (51), Expect = 2e-18 Identities = 79/87 (90%), Gaps = 1/87 (1%) Strand = Plus / Plus Query: 123 gaactgaaacatcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcg 182 |||||||||||||| |||||| | |||||||||||||||| |||||||||||||||||| Sbjct: 41997 gaactgaaacatctaagtagctgg-aggaaaagaaagcaaacgcgattcccgtagtagcg 42055 Query: 183 gcgagcgaaatgggagcagcctaaacc 209 ||||||||| |||| ||||||||||| Sbjct: 42056 gcgagcgaaccgggaacagcctaaacc 42082 Score = 77.8 bits (39), Expect = 4e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 518 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 564 ||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 151806 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtgg 151760 Score = 77.8 bits (39), Expect = 4e-11 Identities = 45/47 (95%) Strand = Plus / Plus Query: 518 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 564 ||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 42397 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtgg 42443
>emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene, exon 1 Length = 2572 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgt 480 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 101 bits (51), Expect = 2e-18 Identities = 79/87 (90%), Gaps = 1/87 (1%) Strand = Plus / Plus Query: 123 gaactgaaacatcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcg 182 |||||||||||||| |||||| | |||||||||||||||| |||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctgg-aggaaaagaaagcaaacgcgattcccgtagtagcg 233 Query: 183 gcgagcgaaatgggagcagcctaaacc 209 ||||||||| |||| ||||||||||| Sbjct: 234 gcgagcgaaccgggaacagcctaaacc 260 Score = 77.8 bits (39), Expect = 4e-11 Identities = 45/47 (95%) Strand = Plus / Plus Query: 518 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 564 ||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtgg 681 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Plus Query: 22 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 76 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacct 127
>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1 Length = 1285 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgt 480 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 99.6 bits (50), Expect = 1e-17 Identities = 78/86 (90%), Gaps = 1/86 (1%) Strand = Plus / Plus Query: 123 gaactgaaacatcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcg 182 |||||||||||||| |||||| | |||||||||||||||| |||||||||||||||| | Sbjct: 175 gaactgaaacatctaagtagctgg-aggaaaagaaagcaaacgcgattcccgtagtagtg 233 Query: 183 gcgagcgaaatgggagcagcctaaac 208 ||||||||| ||||| |||||||||| Sbjct: 234 gcgagcgaactgggaacagcctaaac 259 Score = 77.8 bits (39), Expect = 4e-11 Identities = 45/47 (95%) Strand = Plus / Plus Query: 518 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 564 ||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtgg 627 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Plus Query: 22 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 76 ||||||||||| || || |||| | |||||| ||||||||||||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccgaagattcccaaatagggcaacct 127
>emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and 23S rRNA Length = 2603 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 385 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 444 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 445 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 504 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgt 480 | |||| ||||||||||||| ||||||||| Sbjct: 505 ctgttggggagtgaaatagaacatgaaaccgt 536 Score = 101 bits (51), Expect = 2e-18 Identities = 79/87 (90%), Gaps = 1/87 (1%) Strand = Plus / Plus Query: 123 gaactgaaacatcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcg 182 |||||||||||||| |||||| | |||||||||||||||| |||||||||||||||||| Sbjct: 169 gaactgaaacatctaagtagctgg-aggaaaagaaagcaaacgcgattcccgtagtagcg 227 Query: 183 gcgagcgaaatgggagcagcctaaacc 209 ||||||||| |||| ||||||||||| Sbjct: 228 gcgagcgaaccgggaacagcctaaacc 254 Score = 77.8 bits (39), Expect = 4e-11 Identities = 45/47 (95%) Strand = Plus / Plus Query: 518 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 564 ||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 569 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtgg 615
>gb|J01398.1|CRECPRG23 c.reinhardtii (algae) chloroplast 3s, 7s & 23s(5') rrna gene Length = 814 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 470 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 529 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 530 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 589 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgt 480 | |||| ||||||||||||| ||||||||| Sbjct: 590 ctgttggggagtgaaatagaacatgaaaccgt 621 Score = 101 bits (51), Expect = 2e-18 Identities = 79/87 (90%), Gaps = 1/87 (1%) Strand = Plus / Plus Query: 123 gaactgaaacatcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcg 182 |||||||||||||| |||||| | |||||||||||||||| |||||||||||||||||| Sbjct: 254 gaactgaaacatctaagtagctgg-aggaaaagaaagcaaacgcgattcccgtagtagcg 312 Query: 183 gcgagcgaaatgggagcagcctaaacc 209 ||||||||| |||| ||||||||||| Sbjct: 313 gcgagcgaaccgggaacagcctaaacc 339 Score = 77.8 bits (39), Expect = 4e-11 Identities = 45/47 (95%) Strand = Plus / Plus Query: 518 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 564 ||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 654 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtgg 700
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 196 bits (99), Expect = 6e-47 Identities = 197/229 (86%), Gaps = 3/229 (1%) Strand = Plus / Plus Query: 332 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 391 ||||||||||||||||| |||||||| ||||||||||| |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgaggaatcccatgtgaatcagcgaggaccacctcgtaaggctaa 60 Query: 392 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 451 ||||| ||| ||||||||||| ||| ||||||| ||||||||||||||||||||||| Sbjct: 61 atactactgtgtgaccgatagtgaaccagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 452 gtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagt 511 ||| ||||||||||||| |||||||| | |||| |||||||||||||| | | Sbjct: 121 aaggggagtgaaatagaacatgaaaccg---ttagcttacaagcagtgggaggactattt 177 Query: 512 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 560 | ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 178 aaagtctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226
>gb|L42986.1|RTCCPRGOLA Carteria lunzensis Length = 4448 Score = 196 bits (99), Expect = 6e-47 Identities = 199/225 (88%), Gaps = 8/225 (3%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 442 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 501 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 447 |||||||||||||||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 502 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaatggttaaatagaacc 561 Query: 448 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 507 ||| || || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 562 ccc-gtagg-agtgaaatagaacatgaaaccgttc---gctgacaagcagtgggagggg- 615 Query: 508 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 552 ||| | |||||||||||||||||||||||||||||||||||| Sbjct: 616 gtttga-ccctgaccgcgtgcctgttgaagaatgagccggcgact 659 Score = 125 bits (63), Expect = 2e-25 Identities = 94/103 (91%), Gaps = 1/103 (0%) Strand = Plus / Plus Query: 108 aagagacaacctggcgaactgaaacatcttagtagccagtaggaaaagaaagcaaaagcg 167 ||||| ||||| || ||| |||||||||||||||||| | |||||||||||||||||||| Sbjct: 141 aagaggcaacccggtgaattgaaacatcttagtagccgg-aggaaaagaaagcaaaagcg 199 Query: 168 attcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 210 ||||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 200 attcccggagtagcggcgagcgaaacgggaacagcctaaaccg 242
>gb|L43352.1|CRECPRRNLC Chlamydomonas frankii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 6750 Score = 196 bits (99), Expect = 6e-47 Identities = 205/238 (86%), Gaps = 8/238 (3%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg--g 506 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 507 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 564 ||| || |||||||||||||| ||||||||||||||||||||| ||||| ||||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgacttatagggagtgg 618 Score = 101 bits (51), Expect = 2e-18 Identities = 79/87 (90%), Gaps = 1/87 (1%) Strand = Plus / Plus Query: 123 gaactgaaacatcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcg 182 |||||||||||||| |||||| | |||||||||||||||| |||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctgg-aggaaaagaaagcaaacgcgattcccgtagtagcg 234 Query: 183 gcgagcgaaatgggagcagcctaaacc 209 ||||||||| |||| ||||||||||| Sbjct: 235 gcgagcgaaccgggatcagcctaaacc 261
>emb|X68905.1|CHCFRRNL1 Chloroplast Chlamydomonas frankii rrnL gene, exon 1 Length = 1282 Score = 196 bits (99), Expect = 6e-47 Identities = 205/238 (86%), Gaps = 8/238 (3%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg--g 506 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 507 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 564 ||| || |||||||||||||| ||||||||||||||||||||| ||||| ||||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgacttatagggagtgg 618 Score = 101 bits (51), Expect = 2e-18 Identities = 79/87 (90%), Gaps = 1/87 (1%) Strand = Plus / Plus Query: 123 gaactgaaacatcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcg 182 |||||||||||||| |||||| | |||||||||||||||| |||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctgg-aggaaaagaaagcaaacgcgattcccgtagtagcg 234 Query: 183 gcgagcgaaatgggagcagcctaaacc 209 ||||||||| |||| ||||||||||| Sbjct: 235 gcgagcgaaccgggatcagcctaaacc 261
>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome Length = 161452 Score = 194 bits (98), Expect = 2e-46 Identities = 205/238 (86%), Gaps = 12/238 (5%) Strand = Plus / Minus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 155833 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 155774 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 447 |||||||||||| ||||||||||| |||| ||||| | || |||||||||||| |||||| Sbjct: 155773 taaatactcctgagtgaccgatagtgaagaagtacagcgatggaaaggtgaaatagaacc 155714 Query: 448 cccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 506 ||| || ||| ||||||| ||||| |||||||| | |||| |||||||||||||| Sbjct: 155713 ccctgtcggggagtgaaagagaacatgaaaccg---taagctgacaagcagtgggaggat 155657 Query: 507 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 564 || ||||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 155656 aa-------tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtgg 155606 Score = 194 bits (98), Expect = 2e-46 Identities = 205/238 (86%), Gaps = 12/238 (5%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 78059 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 78118 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 447 |||||||||||| ||||||||||| |||| ||||| | || |||||||||||| |||||| Sbjct: 78119 taaatactcctgagtgaccgatagtgaagaagtacagcgatggaaaggtgaaatagaacc 78178 Query: 448 cccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 506 ||| || ||| ||||||| ||||| |||||||| | |||| |||||||||||||| Sbjct: 78179 ccctgtcggggagtgaaagagaacatgaaaccg---taagctgacaagcagtgggaggat 78235 Query: 507 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 564 || ||||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 78236 aa-------tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtgg 78286 Score = 131 bits (66), Expect = 3e-27 Identities = 94/102 (92%), Gaps = 1/102 (0%) Strand = Plus / Minus Query: 108 aagagacaacctggcgaactgaaacatcttagtagccagtaggaaaagaaagcaaaagcg 167 ||||| ||||| || |||||||||||||| ||||||| | |||||||||||||||||||| Sbjct: 156138 aagaggcaacccggtgaactgaaacatctcagtagccgg-aggaaaagaaagcaaaagcg 156080 Query: 168 attcccgtagtagcggcgagcgaaatgggagcagcctaaacc 209 ||||||| |||||||||||||||||||||| ||||||||||| Sbjct: 156079 attcccggagtagcggcgagcgaaatgggaacagcctaaacc 156038 Score = 131 bits (66), Expect = 3e-27 Identities = 94/102 (92%), Gaps = 1/102 (0%) Strand = Plus / Plus Query: 108 aagagacaacctggcgaactgaaacatcttagtagccagtaggaaaagaaagcaaaagcg 167 ||||| ||||| || |||||||||||||| ||||||| | |||||||||||||||||||| Sbjct: 77754 aagaggcaacccggtgaactgaaacatctcagtagccgg-aggaaaagaaagcaaaagcg 77812 Query: 168 attcccgtagtagcggcgagcgaaatgggagcagcctaaacc 209 ||||||| |||||||||||||||||||||| ||||||||||| Sbjct: 77813 attcccggagtagcggcgagcgaaatgggaacagcctaaacc 77854 Score = 42.1 bits (21), Expect = 1.9 Identities = 51/61 (83%) Strand = Plus / Minus Query: 22 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 81 ||||||||||| || || |||||| |||||| |||| ||| |||||| |||||| |||| Sbjct: 156227 gcttcggggagctggtaacaagcatcgatccgaagatccccgaatagggcaacctcttaa 156168 Query: 82 a 82 | Sbjct: 156167 a 156167 Score = 42.1 bits (21), Expect = 1.9 Identities = 51/61 (83%) Strand = Plus / Plus Query: 22 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 81 ||||||||||| || || |||||| |||||| |||| ||| |||||| |||||| |||| Sbjct: 77665 gcttcggggagctggtaacaagcatcgatccgaagatccccgaatagggcaacctcttaa 77724 Query: 82 a 82 | Sbjct: 77725 a 77725
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 449 ccagtgggtagtgaaatagaacgtgaaacc 478 | ||| ||||||||||||| ||||||| Sbjct: 491 ctgtaggggagtgaaatagaacatgaaacc 520 Score = 93.7 bits (47), Expect = 6e-16 Identities = 78/87 (89%), Gaps = 1/87 (1%) Strand = Plus / Plus Query: 123 gaactgaaacatcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcg 182 ||||||||||||||||||||| | |||||||||||||||| ||||||||| ||||| | Sbjct: 155 gaactgaaacatcttagtagct-gaaggaaaagaaagcaaacgcgattccctgagtagtg 213 Query: 183 gcgagcgaaatgggagcagcctaaacc 209 ||||||||||||||| | ||||||||| Sbjct: 214 gcgagcgaaatgggaacggcctaaacc 240 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 517 ctgaccgcgtgcctgttgaagaatgagccggcgact 552 |||||||||||||||||||||||||||||||||||| Sbjct: 554 ctgaccgcgtgcctgttgaagaatgagccggcgact 589 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||| ||||||||||| || ||| ||||| ||||||||||||||| |||||| ||| Sbjct: 46 gacgaaacgcttcggggagctggaaacaagcaatgatccggagattcccgaatagggcaa 105 Query: 74 cct 76 ||| Sbjct: 106 cct 108
>dbj|AP003265.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0490D09 Length = 154430 Score = 194 bits (98), Expect = 2e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 437 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 496 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 107567 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 107508 Query: 497 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 546 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107507 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 107458
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 333 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 392 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 444 Query: 393 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 452 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 504 Query: 453 tgggtagtgaaatagaacgtgaaacc 478 ||| ||||||||||||| ||||||| Sbjct: 505 aggggagtgaaatagaacatgaaacc 530 Score = 170 bits (86), Expect = 3e-39 Identities = 186/218 (85%), Gaps = 1/218 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||||||||||||||| || || ||| ||||||||| |||||||| |||||| ||| Sbjct: 67 gacgaaatgcttcggggagctgcgaacaagtatagatccgaagattcccgaatagggcaa 126 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||| || ||| |||| ||| ||| | |||| ||||| ||||| | ||||||||||| Sbjct: 127 cctcttgtactacctgtaaaatacataatcaggttagagaaaacctagtgaactgaaaca 186 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 |||||||||| || ||||| | |||||||||||||||||| |||||| ||||||||||| Sbjct: 187 tcttagtagctag-aggaataaaaagcaaaagcgattcccttagtagtggcgagcgaaac 245 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggaga 231 |||| ||||||||||||||||| ||||||||||||||| Sbjct: 246 gggaacagcctaaaccgtgaaagcggggttgtgggaga 283 Score = 85.7 bits (43), Expect = 1e-13 Identities = 46/47 (97%) Strand = Plus / Plus Query: 518 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 564 ||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtgg 613
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 333 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 392 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 3419 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 3478 Query: 393 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 452 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 3479 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 3538 Query: 453 tgggtagtgaaatagaacgtgaaacc 478 ||| ||||||||||||| ||||||| Sbjct: 3539 aggggagtgaaatagaacatgaaacc 3564 Score = 155 bits (78), Expect = 2e-34 Identities = 184/218 (84%), Gaps = 1/218 (0%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 |||||||||||| |||||| || || ||| ||||||||| |||||||| |||||| ||| Sbjct: 3101 gacgaaatgctttggggagctgcgaacaagtatagatccgaagattcccgaatagggcaa 3160 Query: 74 ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 133 ||| || ||| |||| ||| ||| |||| ||||| ||||| | ||||||||||| Sbjct: 3161 cctcttgtactacctgtaaaatacatagtcaggttagagaaaacctagtgaactgaaaca 3220 Query: 134 tcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 |||||||||| || ||||| | |||||||||||||||||| |||||| ||||||||||| Sbjct: 3221 tcttagtagctag-aggaataaaaagcaaaagcgattcccttagtagtggcgagcgaaac 3279 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggaga 231 |||| ||||||||||||||||| ||||||||||||||| Sbjct: 3280 gggaacagcctaaaccgtgaaagcggggttgtgggaga 3317 Score = 85.7 bits (43), Expect = 1e-13 Identities = 46/47 (97%) Strand = Plus / Plus Query: 518 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 564 ||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 3601 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtgg 3647
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 25180 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 25239 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 25240 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 25299 Query: 449 ccagtgggtagtgaaatagaacgtgaaacc 478 | ||| ||||||||||||| ||||||| Sbjct: 25300 ctgtaggggagtgaaatagaacatgaaacc 25329 Score = 101 bits (51), Expect = 2e-18 Identities = 79/87 (90%), Gaps = 1/87 (1%) Strand = Plus / Plus Query: 123 gaactgaaacatcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcg 182 ||||||||||||||||||||| | |||||||||||||||| ||||||||| ||||| | Sbjct: 24964 gaactgaaacatcttagtagct-gaaggaaaagaaagcaaacgcgattccctgagtagtg 25022 Query: 183 gcgagcgaaatgggagcagcctaaacc 209 ||||||||||||||| ||||||||||| Sbjct: 25023 gcgagcgaaatgggaacagcctaaacc 25049 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 517 ctgaccgcgtgcctgttgaagaatgagccggcgact 552 |||||||||||||||||||||||||||||||||||| Sbjct: 25363 ctgaccgcgtgcctgttgaagaatgagccggcgact 25398 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 14 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 73 ||||||| ||||||||||| || ||| ||||| ||||||||||||||| |||||| ||| Sbjct: 24855 gacgaaacgcttcggggagctggaaacaagcaatgatccggagattcccgaatagggcaa 24914 Query: 74 cct 76 ||| Sbjct: 24915 cct 24917
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 192 bits (97), Expect = 9e-46 Identities = 136/149 (91%) Strand = Plus / Plus Query: 332 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 391 ||||||||||||||||||| |||||||||||||||| | |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgtgaaatcccgtgtgaatcatcgaggaccacctcgaaaggctaa 60 Query: 392 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 451 ||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 61 atactcctgtgtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 452 gtgggtagtgaaatagaacgtgaaaccgt 480 | ||| ||||||||||||| ||||||||| Sbjct: 121 gaggggagtgaaatagaacatgaaaccgt 149 Score = 60.0 bits (30), Expect = 8e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 525 gtgcctgttgaagaatgagccggcgactcatagg 558 |||||||||||||||||||||||||||| ||||| Sbjct: 191 gtgcctgttgaagaatgagccggcgacttatagg 224
>gb|L42989.1|CRECPRGOLC Chlamydomonas humicola chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-ChuI gene Length = 4005 Score = 192 bits (97), Expect = 9e-46 Identities = 197/227 (86%), Gaps = 10/227 (4%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 389 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 447 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 448 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 505 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 506 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 552 | | | | |||||||||||||||||||||||||||||||||||| Sbjct: 578 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgact 622 Score = 89.7 bits (45), Expect = 9e-15 Identities = 61/65 (93%), Gaps = 1/65 (1%) Strand = Plus / Plus Query: 127 tgaaacatcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcga 186 ||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||| Sbjct: 178 tgaaacatcttagtagctgg-aggaaaagaaagcaaacgcgattcccgtagtagcggcga 236 Query: 187 gcgaa 191 ||||| Sbjct: 237 gcgaa 241
>gb|L42988.1|CRECPRGOLB Chlamydomonas applanata large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2863 Score = 192 bits (97), Expect = 9e-46 Identities = 197/227 (86%), Gaps = 10/227 (4%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 384 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 443 Query: 389 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 447 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 444 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 503 Query: 448 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 505 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 504 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 558 Query: 506 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 552 | | | | |||||||||||||||||||||||||||||||||||| Sbjct: 559 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgact 603 Score = 89.7 bits (45), Expect = 9e-15 Identities = 61/65 (93%), Gaps = 1/65 (1%) Strand = Plus / Plus Query: 127 tgaaacatcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcga 186 ||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctgg-aggaaaagaaagcaaacgcgattcccgtagtagcggcga 217 Query: 187 gcgaa 191 ||||| Sbjct: 218 gcgaa 222
>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2864 Score = 192 bits (97), Expect = 9e-46 Identities = 196/225 (87%), Gaps = 8/225 (3%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 506 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 565 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 447 |||||||| ||| ||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 566 taaatactactgagtgaccgatagcgaaatagtaccgcgagggaacggttaaatagaacc 625 Query: 448 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 507 ||| || || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 626 ccc-gtagggagtgaaatagaacatgaaaccgttc---gctgacaagcagtgggaggggt 681 Query: 508 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 552 || | |||||||||||||||||||||||||||||||||||| Sbjct: 682 tag---accctgaccgcgtgcctgttgaagaatgagccggcgact 723 Score = 125 bits (63), Expect = 2e-25 Identities = 94/103 (91%), Gaps = 1/103 (0%) Strand = Plus / Plus Query: 108 aagagacaacctggcgaactgaaacatcttagtagccagtaggaaaagaaagcaaaagcg 167 ||||| ||||| || |||||||||||||| ||||||| | |||||||||||||||||||| Sbjct: 140 aagaggcaacccggtgaactgaaacatctaagtagccgg-aggaaaagaaagcaaaagcg 198 Query: 168 attcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 210 ||||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 199 attcccggagtagcggcgagcgaaaagggaacagcctaaaccg 241
>emb|X68921.1|CHCHRRNL1 Chloroplast Chlamydomonas humicola rrnL gene, exon 1 Length = 2524 Score = 192 bits (97), Expect = 9e-46 Identities = 197/227 (86%), Gaps = 10/227 (4%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 389 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 447 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 448 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 505 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 506 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 552 | | | | |||||||||||||||||||||||||||||||||||| Sbjct: 578 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgact 622 Score = 89.7 bits (45), Expect = 9e-15 Identities = 61/65 (93%), Gaps = 1/65 (1%) Strand = Plus / Plus Query: 127 tgaaacatcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcga 186 ||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||| Sbjct: 178 tgaaacatcttagtagctgg-aggaaaagaaagcaaacgcgattcccgtagtagcggcga 236 Query: 187 gcgaa 191 ||||| Sbjct: 237 gcgaa 241
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 190 bits (96), Expect = 3e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 ||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 aaaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgt 480 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 101 bits (51), Expect = 2e-18 Identities = 79/87 (90%), Gaps = 1/87 (1%) Strand = Plus / Plus Query: 123 gaactgaaacatcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcg 182 |||||||||||||| |||||| | |||||||||||||||| |||||||||||||||||| Sbjct: 157 gaactgaaacatctaagtagctgg-aggaaaagaaagcaaacgcgattcccgtagtagcg 215 Query: 183 gcgagcgaaatgggagcagcctaaacc 209 ||||||||| |||| ||||||||||| Sbjct: 216 gcgagcgaaccgggaacagcctaaacc 242 Score = 77.8 bits (39), Expect = 4e-11 Identities = 45/47 (95%) Strand = Plus / Plus Query: 518 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 564 ||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 578 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtgg 624 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Plus Query: 22 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 76 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 55 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacct 109
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 190 bits (96), Expect = 3e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 402 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 461 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 462 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 521 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgt 480 | |||| ||||||||||||| ||||||||| Sbjct: 522 ctgttggggagtgaaatagaacatgaaaccgt 553 Score = 101 bits (51), Expect = 2e-18 Identities = 79/87 (90%), Gaps = 1/87 (1%) Strand = Plus / Plus Query: 123 gaactgaaacatcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcg 182 |||||||||||||| |||||| | |||||||||||||||| |||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctgg-aggaaaagaaagcaaacgcgattcccgtagtagcg 233 Query: 183 gcgagcgaaatgggagcagcctaaacc 209 ||||||||| |||| ||||||||||| Sbjct: 234 gcgagcgaaccgggaacagcctaaacc 260 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 518 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 564 |||| |||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 586 tgactgcgtgcctgttgaagaatgagccggcgacttataggaagtgg 632
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 186 bits (94), Expect = 5e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Minus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 171123 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 171064 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 171063 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 171004 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 504 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 171003 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 170951 Score = 186 bits (94), Expect = 5e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 121803 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 121862 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 121863 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 121922 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 504 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 121923 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 121975 Score = 107 bits (54), Expect = 4e-20 Identities = 91/102 (89%), Gaps = 1/102 (0%) Strand = Plus / Minus Query: 109 agagacaacctggcgaactgaaacatcttagtagccagtaggaaaagaaagcaaaagcga 168 |||| |||||| ||||| ||||||||||||||||| || |||||||||||||||| |||| Sbjct: 171357 agaggcaacctagcgaattgaaacatcttagtagctag-aggaaaagaaagcaaacgcga 171299 Query: 169 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 210 ||||| ||||||||||||||| | |||| |||||||||||| Sbjct: 171298 ttcccccagtagcggcgagcgacaagggatcagcctaaaccg 171257 Score = 107 bits (54), Expect = 4e-20 Identities = 91/102 (89%), Gaps = 1/102 (0%) Strand = Plus / Plus Query: 109 agagacaacctggcgaactgaaacatcttagtagccagtaggaaaagaaagcaaaagcga 168 |||| |||||| ||||| ||||||||||||||||| || |||||||||||||||| |||| Sbjct: 121569 agaggcaacctagcgaattgaaacatcttagtagctag-aggaaaagaaagcaaacgcga 121627 Query: 169 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 210 ||||| ||||||||||||||| | |||| |||||||||||| Sbjct: 121628 ttcccccagtagcggcgagcgacaagggatcagcctaaaccg 121669 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Minus Query: 517 ctgaccgcgtgcctgttgaagaatgagccggcgact 552 |||||||||||||||||||||||||||||||||||| Sbjct: 170941 ctgaccgcgtgcctgttgaagaatgagccggcgact 170906 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 517 ctgaccgcgtgcctgttgaagaatgagccggcgact 552 |||||||||||||||||||||||||||||||||||| Sbjct: 121985 ctgaccgcgtgcctgttgaagaatgagccggcgact 122020 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 48 gatccggagattcccaaataggtcaacct 76 ||||||||||||||| |||||| |||||| Sbjct: 171418 gatccggagattcccgaatagggcaacct 171390 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 48 gatccggagattcccaaataggtcaacct 76 ||||||||||||||| |||||| |||||| Sbjct: 121508 gatccggagattcccgaatagggcaacct 121536
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 186 bits (94), Expect = 5e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 453 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 454 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 513 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 504 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 514 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 566 Score = 107 bits (54), Expect = 4e-20 Identities = 91/102 (89%), Gaps = 1/102 (0%) Strand = Plus / Plus Query: 109 agagacaacctggcgaactgaaacatcttagtagccagtaggaaaagaaagcaaaagcga 168 |||| |||||| ||||| ||||||||||||||||| || |||||||||||||||| |||| Sbjct: 160 agaggcaacctagcgaattgaaacatcttagtagctag-aggaaaagaaagcaaacgcga 218 Query: 169 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 210 ||||| ||||||||||||||| | |||| |||||||||||| Sbjct: 219 ttcccccagtagcggcgagcgacaagggatcagcctaaaccg 260 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 517 ctgaccgcgtgcctgttgaagaatgagccggcgact 552 |||||||||||||||||||||||||||||||||||| Sbjct: 576 ctgaccgcgtgcctgttgaagaatgagccggcgact 611 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 48 gatccggagattcccaaataggtcaacct 76 ||||||||||||||| |||||| |||||| Sbjct: 99 gatccggagattcccgaatagggcaacct 127
>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3397 Score = 184 bits (93), Expect = 2e-43 Identities = 204/237 (86%), Gaps = 8/237 (3%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 567 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 626 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||||||||||||||| | | ||||||| ||||||| ||||| |||||||| Sbjct: 627 taaatactcctgggtgaccgatagtgcaa-agtaccgcgagggaatggtgataagaaccc 685 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 508 | ||| ||||||||||||| |||||||| | |||| ||||||||||||| | Sbjct: 686 ctgtaggggagtgaaatagaacatgaaaccg---taagctgacaagcagtgggagc---a 739 Query: 509 agtgatctc-tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 564 ||| | || ||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 740 agttaacttgtgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtgg 796 Score = 105 bits (53), Expect = 2e-19 Identities = 90/101 (89%), Gaps = 1/101 (0%) Strand = Plus / Plus Query: 109 agagacaacctggcgaactgaaacatcttagtagccagtaggaaaagaaagcaaaagcga 168 |||||||||| | ||| ||||||||||||||||| | |||||||||||||||| |||| Sbjct: 140 agagacaacccagtgaattgaaacatcttagtagctgg-aggaaaagaaagcaaacgcga 198 Query: 169 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 209 ||||||||||||||||||||||| |||| ||||||||||| Sbjct: 199 ttcccgtagtagcggcgagcgaaccgggatcagcctaaacc 239
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 184 bits (93), Expect = 2e-43 Identities = 139/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||||| Sbjct: 446 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaaggc 505 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaacc 447 |||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||| || Sbjct: 506 taaatactcctgagtgaccgatagcgaactagtaccgtgagggaaaggtgaaaaagatcc 565 Query: 448 cccagtgggtagtgaaatagaacgtgaaaccgt 480 ||| ||| ||||||||||||| ||||||||| Sbjct: 566 cccgtagggaagtgaaatagaacatgaaaccgt 598 Score = 117 bits (59), Expect = 4e-23 Identities = 93/103 (90%), Gaps = 1/103 (0%) Strand = Plus / Plus Query: 108 aagagacaacctggcgaactgaaacatcttagtagccagtaggaaaagaaagcaaaagcg 167 |||||| |||| || ||| ||||||||||||||| || | |||||||||||||||| ||| Sbjct: 148 aagagataacccggtgaattgaaacatcttagtaaccgg-aggaaaagaaagcaaacgcg 206 Query: 168 attcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 210 |||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 207 attcccttagtagcggcgagcgaaatgggaacagcctaaaccg 249 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 517 ctgaccgcgtgcctgttgaagaatgagccggcgact 552 |||||||||||||||||||||||||||||||||||| Sbjct: 629 ctgaccgcgtgcctgttgaagaatgagccggcgact 664
>gb|L42984.1|ANKCPRGOL Ankistrodesmus stipitatus chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-AstI gene Length = 4859 Score = 182 bits (92), Expect = 8e-43 Identities = 203/234 (86%), Gaps = 12/234 (5%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||||||||||||||||||| || |||||||||| | ||||| Sbjct: 383 cccgagtagcatggggcacgtggaatcccgtgtgaatctgcgaggaccacctcgtaaggc 442 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 447 ||||||||| | |||||||||||||||| |||||| |||| |||||| ||||| |||||| Sbjct: 443 taaatactcttaggtgaccgatagcgaaatagtacagtgatggaaagttgaaagagaacc 502 Query: 448 ccc-agtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagg 504 ||| ||| ||||||||||||| |||||||| |||||| |||||||||||||| Sbjct: 503 cccttaaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggagg 557 Query: 505 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 558 | ||| || |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 558 gtttagt--tc-ctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 608 Score = 107 bits (54), Expect = 4e-20 Identities = 161/194 (82%), Gaps = 2/194 (1%) Strand = Plus / Plus Query: 16 cgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacc 75 ||||| ||||||||||| || || |||||| |||||| |||| ||| |||||| ||||| Sbjct: 49 cgaaacgcttcggggagctggcaacaagcatcgatccgaagatccccgaatagggcaacc 108 Query: 76 tttta-aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 134 | ||| ||||||| |||||| ||| | || |||| |||| ||||| |||||||| Sbjct: 109 tcttagaactgcccactgaattcataggtgggtcagaggcaactcagcgaattgaaacat 168 Query: 135 cttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 194 ||||||||| | |||||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 169 cttagtagct-gaaggaaaagaaagcaaaagcgattcccaaagtagcggcgagcggaatg 227 Query: 195 ggagcagcctaaac 208 ||| |||||||||| Sbjct: 228 ggaacagcctaaac 241
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 182 bits (92), Expect = 8e-43 Identities = 137/152 (90%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||| | Sbjct: 371 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaagac 430 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgt 480 ||| ||| ||||||||||| | ||||||||| Sbjct: 491 ccataggggagtgaaatagatcatgaaaccgt 522 Score = 145 bits (73), Expect = 2e-31 Identities = 161/189 (85%), Gaps = 1/189 (0%) Strand = Plus / Plus Query: 22 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 81 ||||||||||| || || |||| | |||||| |||||||| |||||| ||||||| || Sbjct: 62 gcttcggggagctggaatcaagctttgatccgaagattcccgaatagggcaaccttatat 121 Query: 82 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 141 ||| |||| ||||| ||| |||| ||||||||||| |||||| ||||||||||||||| Sbjct: 122 acttcctgttgaattcatagacaggtaagagacaacccggcgaattgaaacatcttagta 181 Query: 142 gccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 201 ||| || ||||||||||||||| ||||||||| |||||| ||||||||||| |||| ||| Sbjct: 182 gccggt-ggaaaagaaagcaaacgcgattcccttagtagtggcgagcgaaaagggatcag 240 Query: 202 cctaaaccg 210 |||||||| Sbjct: 241 tctaaaccg 249 Score = 89.7 bits (45), Expect = 9e-15 Identities = 48/49 (97%) Strand = Plus / Plus Query: 516 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 564 ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 556 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtgg 604
>gb|L49148.1|CRECPRGOLF Chlamydomonas mexicana chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4181 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 449 ccagtgggtagtgaaatagaacgtgaaacc 478 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 79.8 bits (40), Expect = 9e-12 Identities = 46/48 (95%) Strand = Plus / Plus Query: 517 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 564 |||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtgg 629 Score = 79.8 bits (40), Expect = 9e-12 Identities = 152/188 (80%), Gaps = 1/188 (0%) Strand = Plus / Plus Query: 22 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 81 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| | || Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacctataaa 132 Query: 82 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 141 ||| ||| ||| ||| ||| ||||| ||||| | |||||||||||||| |||| Sbjct: 133 actacctatataattcatagttaggaaagaggcaacccagtgaactgaaacatctaagta 192 Query: 142 gccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 201 || | |||||||||||||||| |||||||||||||||| ||||| |||| |||| || Sbjct: 193 gctgg-aggaaaagaaagcaaacgcgattcccgtagtagtggcgaacgaaccgggattag 251 Query: 202 cctaaacc 209 |||||||| Sbjct: 252 cctaaacc 259
>gb|DQ313084.1| Uncultured bacterium clone 3R3F 23S ribosomal RNA gene, partial sequence Length = 629 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 ||||||||||||||| |||| | |||||||||||||||||| |||||||||| | ||||| Sbjct: 243 cccgagtagcatgggacacgagaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 302 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 ||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 303 taaatactcttaggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 362 Query: 449 ccagtgggtagtgaaatagaacgtgaaacc 478 | ||| ||||||||||||| ||||||| Sbjct: 363 ctgtaggggagtgaaatagaacatgaaacc 392 Score = 101 bits (51), Expect = 2e-18 Identities = 79/87 (90%), Gaps = 1/87 (1%) Strand = Plus / Plus Query: 123 gaactgaaacatcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcg 182 ||||||||||||||||||||| | ||||| |||||||||| |||||||||| ||||| | Sbjct: 8 gaactgaaacatcttagtagct-gaaggaagagaaagcaaacgcgattcccggagtagtg 66 Query: 183 gcgagcgaaatgggagcagcctaaacc 209 ||||||||||||||| ||||||||||| Sbjct: 67 gcgagcgaaatgggaacagcctaaacc 93 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 517 ctgaccgcgtgcctgttgaagaatgagccggcgact 552 |||||||||| |||||||||||||| |||||||||| Sbjct: 426 ctgaccgcgtacctgttgaagaatgggccggcgact 461
>emb|X68910.1|CHCMRRNL1 Chloroplast Chlamydomonas mexicana rrnL gene, exon 1 Length = 1965 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 449 ccagtgggtagtgaaatagaacgtgaaacc 478 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 79.8 bits (40), Expect = 9e-12 Identities = 46/48 (95%) Strand = Plus / Plus Query: 517 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 564 |||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtgg 629 Score = 79.8 bits (40), Expect = 9e-12 Identities = 152/188 (80%), Gaps = 1/188 (0%) Strand = Plus / Plus Query: 22 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 81 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| | || Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacctataaa 132 Query: 82 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 141 ||| ||| ||| ||| ||| ||||| ||||| | |||||||||||||| |||| Sbjct: 133 actacctatataattcatagttaggaaagaggcaacccagtgaactgaaacatctaagta 192 Query: 142 gccagtaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 201 || | |||||||||||||||| |||||||||||||||| ||||| |||| |||| || Sbjct: 193 gctgg-aggaaaagaaagcaaacgcgattcccgtagtagtggcgaacgaaccgggattag 251 Query: 202 cctaaacc 209 |||||||| Sbjct: 252 cctaaacc 259
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 176 bits (89), Expect = 5e-41 Identities = 134/149 (89%) Strand = Plus / Plus Query: 332 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 391 ||||||||||||||| ||| |||||| ||||||||||| || |||| || | |||||||| Sbjct: 1 gagtagcatggggcaggtgaaatcccatgtgaatcagcgagaaccatctcgtaaggctaa 60 Query: 392 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 451 ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 61 atactcctgtgtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaaccccga 120 Query: 452 gtgggtagtgaaatagaacgtgaaaccgt 480 ||| ||||||||||||| ||||||||| Sbjct: 121 aaggggagtgaaatagaacatgaaaccgt 149 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 516 tctgaccgcgtgcctgttgaagaatgagccggcga 550 |||||||| |||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcga 216
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 176 bits (89), Expect = 5e-41 Identities = 138/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 527 cccgagtagcatggggcacgtgaaatcccgtgtgaatccacgaggaccacctcgtaaggc 586 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||||||||||||||| ||| |||||||| |||||||||||||||| | || Sbjct: 587 taaatactcctgggtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaaagaacc 646 Query: 449 ccagt-gggtagtgaaatagaacgtgaaaccgt 480 ||||| ||| ||||||||||||| ||||||||| Sbjct: 647 ccagtcggggagtgaaatagaacatgaaaccgt 679 Score = 133 bits (67), Expect = 7e-28 Identities = 95/103 (92%), Gaps = 1/103 (0%) Strand = Plus / Plus Query: 108 aagagacaacctggcgaactgaaacatcttagtagccagtaggaaaagaaagcaaaagcg 167 ||||||||||| || ||| |||||||||||||||||| | |||||||||||||||| ||| Sbjct: 148 aagagacaacccggtgaattgaaacatcttagtagccgg-aggaaaagaaagcaaacgcg 206 Query: 168 attcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 210 |||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 207 attcccgtagtagcggcgagcgaactgggaacagcctaaaccg 249 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 518 tgaccgcgtgcctgttgaagaatgagccggcgact 552 ||||||| ||||||||||||||||||||||||||| Sbjct: 714 tgaccgcatgcctgttgaagaatgagccggcgact 748
>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgtg 481 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 518 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 558 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445 Score = 65.9 bits (33), Expect = 1e-07 Identities = 76/89 (85%), Gaps = 1/89 (1%) Strand = Plus / Plus Query: 121 gcgaactgaaacatcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtag 180 |||||||||||||||||||||| | | |||||| ||||| |||| ||| |||| ||||| Sbjct: 6 gcgaactgaaacatcttagtag-ctggaggaaaggaaagtaaaaacgactccctaagtag 64 Query: 181 cggcgagcgaaatgggagcagcctaaacc 209 ||||||||||| |||| |||||||||| Sbjct: 65 cggcgagcgaacggggaagagcctaaacc 93
>gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgtg 481 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 518 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 558 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445 Score = 65.9 bits (33), Expect = 1e-07 Identities = 76/89 (85%), Gaps = 1/89 (1%) Strand = Plus / Plus Query: 121 gcgaactgaaacatcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtag 180 |||||||||||||||||||||| | | |||||| ||||| |||| ||| |||| ||||| Sbjct: 6 gcgaactgaaacatcttagtag-ctggaggaaaggaaagtaaaaacgactccctaagtag 64 Query: 181 cggcgagcgaaatgggagcagcctaaacc 209 ||||||||||| |||| |||||||||| Sbjct: 65 cggcgagcgaacggggaagagcctaaacc 93
>gb|DQ312972.1| Uncultured bacterium clone 3N4D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgtg 481 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 69.9 bits (35), Expect = 9e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 518 tgaccgcgtgcctgttgaagaatgagccggcgactcataggca 560 |||||| |||||||||||||||||||||||||||| ||||||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggca 460 Score = 60.0 bits (30), Expect = 8e-06 Identities = 73/86 (84%), Gaps = 1/86 (1%) Strand = Plus / Plus Query: 124 aactgaaacatcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtagcgg 183 |||||||||||||||||||| | |||||| ||||| |||| ||| |||| |||||||| Sbjct: 22 aactgaaacatcttagtagctgg-aggaaaggaaagtaaaaacgactccctaagtagcgg 80 Query: 184 cgagcgaaatgggagcagcctaaacc 209 |||||||| |||| |||||||||| Sbjct: 81 cgagcgaacggggaagagcctaaacc 106
>gb|DQ312883.1| Uncultured bacterium clone 3K4C 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgtg 481 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 69.9 bits (35), Expect = 9e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 518 tgaccgcgtgcctgttgaagaatgagccggcgactcataggca 560 |||||| |||||||||||||||||||||||||||| ||||||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggca 460 Score = 65.9 bits (33), Expect = 1e-07 Identities = 76/89 (85%), Gaps = 1/89 (1%) Strand = Plus / Plus Query: 121 gcgaactgaaacatcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtag 180 |||||||||||||||||||||| | | |||||| ||||| |||| ||| |||| ||||| Sbjct: 19 gcgaactgaaacatcttagtag-ctggaggaaaggaaagtaaaaacgactccctaagtag 77 Query: 181 cggcgagcgaaatgggagcagcctaaacc 209 ||||||||||| |||| |||||||||| Sbjct: 78 cggcgagcgaacggggaagagcctaaacc 106
>gb|DQ312801.1| Uncultured bacterium clone 3H5F 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgtg 481 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 518 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 558 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445 Score = 65.9 bits (33), Expect = 1e-07 Identities = 76/89 (85%), Gaps = 1/89 (1%) Strand = Plus / Plus Query: 121 gcgaactgaaacatcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtag 180 |||||||||||||||||||||| | | |||||| ||||| |||| ||| |||| ||||| Sbjct: 6 gcgaactgaaacatcttagtag-ctggaggaaaggaaagtaaaaacgactccctaagtag 64 Query: 181 cggcgagcgaaatgggagcagcctaaacc 209 ||||||||||| |||| |||||||||| Sbjct: 65 cggcgagcgaacggggaagagcctaaacc 93
>gb|DQ312666.1| Uncultured bacterium clone 3D4G 23S ribosomal RNA gene, partial sequence Length = 806 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgtg 481 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 69.9 bits (35), Expect = 9e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 518 tgaccgcgtgcctgttgaagaatgagccggcgactcataggca 560 |||||| |||||||||||||||||||||||||||| ||||||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggca 460 Score = 65.9 bits (33), Expect = 1e-07 Identities = 76/89 (85%), Gaps = 1/89 (1%) Strand = Plus / Plus Query: 121 gcgaactgaaacatcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtag 180 |||||||||||||||||||||| | | |||||| ||||| |||| ||| |||| ||||| Sbjct: 19 gcgaactgaaacatcttagtag-ctggaggaaaggaaagtaaaaacgactccctaagtag 77 Query: 181 cggcgagcgaaatgggagcagcctaaacc 209 ||||||||||| |||| |||||||||| Sbjct: 78 cggcgagcgaacggggaagagcctaaacc 106
>gb|DQ312593.1| Uncultured bacterium clone 3B8B 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgtg 481 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 69.9 bits (35), Expect = 9e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 518 tgaccgcgtgcctgttgaagaatgagccggcgactcataggca 560 |||||| |||||||||||||||||||||||||||| ||||||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggca 460 Score = 65.9 bits (33), Expect = 1e-07 Identities = 76/89 (85%), Gaps = 1/89 (1%) Strand = Plus / Plus Query: 121 gcgaactgaaacatcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtag 180 |||||||||||||||||||||| | | |||||| ||||| |||| ||| |||| ||||| Sbjct: 19 gcgaactgaaacatcttagtag-ctggaggaaaggaaagtaaaaacgactccctaagtag 77 Query: 181 cggcgagcgaaatgggagcagcctaaacc 209 ||||||||||| |||| |||||||||| Sbjct: 78 cggcgagcgaacggggaagagcctaaacc 106
>gb|DQ312550.1| Uncultured bacterium clone 3B11D 23S ribosomal RNA gene, partial sequence Length = 806 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgtg 481 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 69.9 bits (35), Expect = 9e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 518 tgaccgcgtgcctgttgaagaatgagccggcgactcataggca 560 |||||| |||||||||||||||||||||||||||| ||||||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggca 460 Score = 65.9 bits (33), Expect = 1e-07 Identities = 76/89 (85%), Gaps = 1/89 (1%) Strand = Plus / Plus Query: 121 gcgaactgaaacatcttagtagccagtaggaaaagaaagcaaaagcgattcccgtagtag 180 |||||||||||||||||||||| | | |||||| ||||| |||| ||| |||| ||||| Sbjct: 19 gcgaactgaaacatcttagtag-ctggaggaaaggaaagtaaaaacgactccctaagtag 77 Query: 181 cggcgagcgaaatgggagcagcctaaacc 209 ||||||||||| |||| |||||||||| Sbjct: 78 cggcgagcgaacggggaagagcctaaacc 106
>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2604 Score = 176 bits (89), Expect = 5e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 328 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 387 ||||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||| Sbjct: 365 acccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaagg 424 Query: 388 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 447 |||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 425 ctaaatactcctggatgaccgatagcgaactagtaccgtgagggaagggtgaaaagaacc 484 Query: 448 c 448 | Sbjct: 485 c 485 Score = 121 bits (61), Expect = 3e-24 Identities = 89/97 (91%), Gaps = 1/97 (1%) Strand = Plus / Plus Query: 114 caacctggcgaactgaaacatcttagtagccagtaggaaaagaaagcaaaagcgattccc 173 ||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||| Sbjct: 150 caacctggcgaactgaaacatcttagtagccag-aggaagagaaagcaaacgcgattccc 208 Query: 174 gtagtagcggcgagcgaaatgggagcagcctaaaccg 210 |||||||||||||||| |||| |||||||||||| Sbjct: 209 ccagtagcggcgagcgaagagggaacagcctaaaccg 245 Score = 87.7 bits (44), Expect = 4e-14 Identities = 47/48 (97%) Strand = Plus / Plus Query: 517 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 564 ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 551 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcggtgg 598 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 251 gctaggcgaagcggttgagtgccgcacc 278 ||||| |||||||||||||| ||||||| Sbjct: 287 gctagacgaagcggttgagttccgcacc 314
>gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2901 Score = 176 bits (89), Expect = 5e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 328 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 387 ||||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||| Sbjct: 378 acccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaagg 437 Query: 388 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 447 |||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 438 ctaaatactcctggatgaccgatagcgaactagtaccgtgagggaagggtgaaaagaacc 497 Query: 448 c 448 | Sbjct: 498 c 498 Score = 121 bits (61), Expect = 3e-24 Identities = 89/97 (91%), Gaps = 1/97 (1%) Strand = Plus / Plus Query: 114 caacctggcgaactgaaacatcttagtagccagtaggaaaagaaagcaaaagcgattccc 173 ||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||| Sbjct: 163 caacctggcgaactgaaacatcttagtagccag-aggaagagaaagcaaacgcgattccc 221 Query: 174 gtagtagcggcgagcgaaatgggagcagcctaaaccg 210 |||||||||||||||| |||| |||||||||||| Sbjct: 222 ccagtagcggcgagcgaagagggaacagcctaaaccg 258 Score = 83.8 bits (42), Expect = 6e-13 Identities = 42/42 (100%) Strand = Plus / Plus Query: 517 ctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 558 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 564 ctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 605 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 251 gctaggcgaagcggttgagtgccgcacc 278 ||||| |||||||||||||| ||||||| Sbjct: 300 gctagacgaagcggttgagttccgcacc 327 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,876,741 Number of Sequences: 3902068 Number of extensions: 3876741 Number of successful extensions: 114436 Number of sequences better than 10.0: 26536 Number of HSP's better than 10.0 without gapping: 26246 Number of HSP's successfully gapped in prelim test: 325 Number of HSP's that attempted gapping in prelim test: 68741 Number of HSP's gapped (non-prelim): 41778 length of query: 564 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 541 effective length of database: 17,143,297,704 effective search space: 9274524057864 effective search space used: 9274524057864 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
