ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd18i10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT016431.1| Zea mays clone Contig264 mRNA sequence 141 4e-31
2gb|AC109365.2| Oryza sativa (japonica cultivar-group) chromosome... 98 6e-18
3gb|AC109594.2| Oryza sativa (japonica cultivar-group) chromosome... 98 6e-18
4dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 98 6e-18
5dbj|AK104660.1| Oryza sativa (japonica cultivar-group) cDNA clon... 98 6e-18
6dbj|AK072671.1| Oryza sativa (japonica cultivar-group) cDNA clon... 98 6e-18
7gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 98 6e-18
8gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 90 1e-15
9gb|AC134233.3| Oryza sativa (japonica cultivar-group) chromosome... 90 1e-15
10dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 90 1e-15
11dbj|AK104761.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 1e-15
12dbj|AK104265.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 1e-15
13dbj|AK104111.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 1e-15
14dbj|AK061350.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 1e-15
15gb|BT016340.1| Zea mays clone Contig173 mRNA sequence 70 1e-09
16gb|AY105823.1| Zea mays PCO145462 mRNA sequence 70 1e-09
17gb|AY106684.1| Zea mays PCO086432 mRNA sequence 60 1e-06
18gb|BT013198.1| Lycopersicon esculentum clone 134354R, mRNA sequence 54 8e-05
19gb|DQ200374.1| Solanum tuberosum clone 059F12 unknown mRNA 46 0.019
20gb|BT014007.1| Lycopersicon esculentum clone 133059F, mRNA sequence 46 0.019
21gb|BT016876.1| Zea mays clone Contig709 mRNA sequence 44 0.073
22gb|AC084762.8| Oryza sativa chromosome 3 BAC OSJNBa0013O08 genom... 44 0.073
23dbj|AK064760.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.073
24emb|AJ749993.1| Catharanthus roseus mRNA for 40S ribosomal prote... 42 0.29
25gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete s... 40 1.1
26emb|CT030165.7| M.truncatula DNA sequence from clone MTH2-150K22... 40 1.1
27ref|NM_121524.3| Arabidopsis thaliana structural constituent of ... 38 4.5
28gb|AC151815.1| Solanum demissum chromosome 5 clone PGEC472P22 ma... 38 4.5
29gb|AY528719.1| Homo sapiens estrogen-related receptor gamma (ESR... 38 4.5
30gb|BT011315.1| Arabidopsis thaliana At5g15200 gene, complete cds 38 4.5
31gb|BT010847.1| Arabidopsis thaliana At5g15200 mRNA, complete cds 38 4.5
32gb|AC111092.10| Mus musculus chromosome 12, clone RP23-168O9, co... 38 4.5
33emb|AL603752.6| Human DNA sequence from clone RP11-296A1 on chro... 38 4.5
34emb|AL583807.20| Human DNA sequence from clone RP11-105C7 on chr... 38 4.5
35emb|AL157833.14| Human DNA sequence from clone RP11-205K10 on ch... 38 4.5
36emb|AL353993.1|ATF8M21 Arabidopsis thaliana DNA chromosome 5, BA... 38 4.5
37gb|AC123595.1| Homo sapiens chromosome 5 clone RP11-213H15, comp... 38 4.5
38gb|AC079845.31| Mus musculus clone rp23-461a12, complete sequence 38 4.5
39gb|AC093281.2| Homo sapiens chromosome 5 clone RP11-414H23, comp... 38 4.5
40emb|BX829588.1|CNS0A17H Arabidopsis thaliana Full-length cDNA Co... 38 4.5
41gb|AF154636.1| Nicotiana tabacum clone PR5 mRNA sequence 38 4.5
42emb|BX470129.4| Zebrafish DNA sequence from clone CH211-172B19 i... 38 4.5
43gb|AC159324.2| Mus musculus BAC clone RP23-9D1 from chromosome 1... 38 4.5
44gb|AC079832.18| Mus musculus strain C57BL/6J chromosome 3 clone ... 38 4.5
45emb|AL807793.7| Mouse DNA sequence from clone RP23-33N15 on chro... 38 4.5 
>gb|BT016431.1| Zea mays clone Contig264 mRNA sequence
          Length = 866

 Score =  141 bits (71), Expect = 4e-31
 Identities = 94/102 (92%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggactgaggtgcaagcgtgagctctggagggtccagtatgcattgagcaggatccgna 60
           |||| |||||||||||||||||||| |||||||||||||||||| ||||||||||||| |
Sbjct: 185 atgggctgaggtgcaagcgtgagctttggagggtccagtatgcactgagcaggatccgta 244

                                                     
Query: 61  atgctgcaaggcacttgctcacactggatgagaagaatcccc 102
           |||||||||||||||||||||| || || |||||||| ||||
Sbjct: 245 atgctgcaaggcacttgctcacccttgacgagaagaaccccc 286
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>gb|AC109365.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0034P08, complete sequence
          Length = 173088

 Score = 97.6 bits (49), Expect = 6e-18
 Identities = 87/100 (87%)
 Strand = Plus / Minus

                                                                         
Query: 1     atggactgaggtgcaagcgtgagctctggagggtccagtatgcattgagcaggatccgna 60
             ||||||||||||||||||||||||| ||| | || |||||||| |||||| | ||||| |
Sbjct: 14162 atggactgaggtgcaagcgtgagctgtggcgtgttcagtatgctttgagccgtatccgta 14103

                                                     
Query: 61    atgctgcaaggcacttgctcacactggatgagaagaatcc 100
             |   |||||||||| |||||||||| ||||||||||||||
Sbjct: 14102 acaatgcaaggcacctgctcacacttgatgagaagaatcc 14063



 Score = 97.6 bits (49), Expect = 6e-18
 Identities = 87/100 (87%)
 Strand = Plus / Minus

                                                                        
Query: 1    atggactgaggtgcaagcgtgagctctggagggtccagtatgcattgagcaggatccgna 60
            ||||||||||||||||||||||||| ||| | || |||||||| |||||| | ||||| |
Sbjct: 9403 atggactgaggtgcaagcgtgagctgtggcgtgttcagtatgctttgagccgtatccgta 9344

                                                    
Query: 61   atgctgcaaggcacttgctcacactggatgagaagaatcc 100
            |   |||||||||| |||||||||| ||||||||||||||
Sbjct: 9343 acaatgcaaggcacctgctcacacttgatgagaagaatcc 9304
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>gb|AC109594.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0007P22, complete sequence
          Length = 148068

 Score = 97.6 bits (49), Expect = 6e-18
 Identities = 87/100 (87%)
 Strand = Plus / Minus

                                                                          
Query: 1      atggactgaggtgcaagcgtgagctctggagggtccagtatgcattgagcaggatccgna 60
              ||||||||||||||||||||||||| ||| | || |||||||| |||||| | ||||| |
Sbjct: 125680 atggactgaggtgcaagcgtgagctgtggcgtgttcagtatgctttgagccgtatccgta 125621

                                                      
Query: 61     atgctgcaaggcacttgctcacactggatgagaagaatcc 100
              |   |||||||||| |||||||||| ||||||||||||||
Sbjct: 125620 acaatgcaaggcacctgctcacacttgatgagaagaatcc 125581



 Score = 97.6 bits (49), Expect = 6e-18
 Identities = 87/100 (87%)
 Strand = Plus / Minus

                                                                          
Query: 1      atggactgaggtgcaagcgtgagctctggagggtccagtatgcattgagcaggatccgna 60
              ||||||||||||||||||||||||| ||| | || |||||||| |||||| | ||||| |
Sbjct: 120921 atggactgaggtgcaagcgtgagctgtggcgtgttcagtatgctttgagccgtatccgta 120862

                                                      
Query: 61     atgctgcaaggcacttgctcacactggatgagaagaatcc 100
              |   |||||||||| |||||||||| ||||||||||||||
Sbjct: 120861 acaatgcaaggcacctgctcacacttgatgagaagaatcc 120822
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 97.6 bits (49), Expect = 6e-18
 Identities = 87/100 (87%)
 Strand = Plus / Plus

                                                                            
Query: 1        atggactgaggtgcaagcgtgagctctggagggtccagtatgcattgagcaggatccgna 60
                ||||||||||||||||||||||||| ||| | || |||||||| |||||| | ||||| |
Sbjct: 22331895 atggactgaggtgcaagcgtgagctgtggcgtgttcagtatgctttgagccgtatccgta 22331954

                                                        
Query: 61       atgctgcaaggcacttgctcacactggatgagaagaatcc 100
                |   |||||||||| |||||||||| ||||||||||||||
Sbjct: 22331955 acaatgcaaggcacctgctcacacttgatgagaagaatcc 22331994



 Score = 97.6 bits (49), Expect = 6e-18
 Identities = 87/100 (87%)
 Strand = Plus / Plus

                                                                            
Query: 1        atggactgaggtgcaagcgtgagctctggagggtccagtatgcattgagcaggatccgna 60
                ||||||||||||||||||||||||| ||| | || |||||||| |||||| | ||||| |
Sbjct: 22327136 atggactgaggtgcaagcgtgagctgtggcgtgttcagtatgctttgagccgtatccgta 22327195

                                                        
Query: 61       atgctgcaaggcacttgctcacactggatgagaagaatcc 100
                |   |||||||||| |||||||||| ||||||||||||||
Sbjct: 22327196 acaatgcaaggcacctgctcacacttgatgagaagaatcc 22327235
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>dbj|AK104660.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-D11, full
           insert sequence
          Length = 955

 Score = 97.6 bits (49), Expect = 6e-18
 Identities = 87/100 (87%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggactgaggtgcaagcgtgagctctggagggtccagtatgcattgagcaggatccgna 60
           ||||||||||||||||||||||||| ||| | || |||||||| |||||| | ||||| |
Sbjct: 181 atggactgaggtgcaagcgtgagctgtggcgtgttcagtatgctttgagccgtatccgta 240

                                                   
Query: 61  atgctgcaaggcacttgctcacactggatgagaagaatcc 100
           |   |||||||||| |||||||||| ||||||||||||||
Sbjct: 241 acaatgcaaggcacctgctcacacttgatgagaagaatcc 280
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>dbj|AK072671.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023134P20, full
           insert sequence
          Length = 964

 Score = 97.6 bits (49), Expect = 6e-18
 Identities = 87/100 (87%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggactgaggtgcaagcgtgagctctggagggtccagtatgcattgagcaggatccgna 60
           ||||||||||||||||||||||||| ||| | || |||||||| |||||| | ||||| |
Sbjct: 170 atggactgaggtgcaagcgtgagctgtggcgtgttcagtatgctttgagccgtatccgta 229

                                                   
Query: 61  atgctgcaaggcacttgctcacactggatgagaagaatcc 100
           |   |||||||||| |||||||||| ||||||||||||||
Sbjct: 230 acaatgcaaggcacctgctcacacttgatgagaagaatcc 269
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 97.6 bits (49), Expect = 6e-18
 Identities = 87/100 (87%)
 Strand = Plus / Plus

                                                                            
Query: 1        atggactgaggtgcaagcgtgagctctggagggtccagtatgcattgagcaggatccgna 60
                ||||||||||||||||||||||||| ||| | || |||||||| |||||| | ||||| |
Sbjct: 22641806 atggactgaggtgcaagcgtgagctgtggcgtgttcagtatgctttgagccgtatccgta 22641865

                                                        
Query: 61       atgctgcaaggcacttgctcacactggatgagaagaatcc 100
                |   |||||||||| |||||||||| ||||||||||||||
Sbjct: 22641866 acaatgcaaggcacctgctcacacttgatgagaagaatcc 22641905



 Score = 97.6 bits (49), Expect = 6e-18
 Identities = 87/100 (87%)
 Strand = Plus / Plus

                                                                            
Query: 1        atggactgaggtgcaagcgtgagctctggagggtccagtatgcattgagcaggatccgna 60
                ||||||||||||||||||||||||| ||| | || |||||||| |||||| | ||||| |
Sbjct: 22637047 atggactgaggtgcaagcgtgagctgtggcgtgttcagtatgctttgagccgtatccgta 22637106

                                                        
Query: 61       atgctgcaaggcacttgctcacactggatgagaagaatcc 100
                |   |||||||||| |||||||||| ||||||||||||||
Sbjct: 22637107 acaatgcaaggcacctgctcacacttgatgagaagaatcc 22637146
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 89.7 bits (45), Expect = 1e-15
 Identities = 86/100 (86%)
 Strand = Plus / Plus

                                                                           
Query: 1       atggactgaggtgcaagcgtgagctctggagggtccagtatgcattgagcaggatccgna 60
               ||||||||||||||||||||||||| ||| | || |||||||| |||||| | ||||| |
Sbjct: 2969237 atggactgaggtgcaagcgtgagctgtggcgtgttcagtatgctttgagccgtatccgta 2969296

                                                       
Query: 61      atgctgcaaggcacttgctcacactggatgagaagaatcc 100
               |   |||||||||  |||||||||| ||||||||||||||
Sbjct: 2969297 acaatgcaaggcatctgctcacacttgatgagaagaatcc 2969336



 Score = 44.1 bits (22), Expect = 0.073
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                                 
Query: 54       atccgnaatgctgcaaggcacttgctcacactggatgagaagaatcccc 102
                ||||| |||||||||||| |  ||||||| || ||||||||||| ||||
Sbjct: 14844913 atccgcaatgctgcaagggagctgctcacccttgatgagaagaaccccc 14844961
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>gb|AC134233.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0016I15,
              complete sequence
          Length = 166282

 Score = 89.7 bits (45), Expect = 1e-15
 Identities = 86/100 (86%)
 Strand = Plus / Plus

                                                                          
Query: 1      atggactgaggtgcaagcgtgagctctggagggtccagtatgcattgagcaggatccgna 60
              ||||||||||||||||||||||||| ||| | || |||||||| |||||| | ||||| |
Sbjct: 106724 atggactgaggtgcaagcgtgagctgtggcgtgttcagtatgctttgagccgtatccgta 106783

                                                      
Query: 61     atgctgcaaggcacttgctcacactggatgagaagaatcc 100
              |   |||||||||  |||||||||| ||||||||||||||
Sbjct: 106784 acaatgcaaggcatctgctcacacttgatgagaagaatcc 106823
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 89.7 bits (45), Expect = 1e-15
 Identities = 86/100 (86%)
 Strand = Plus / Plus

                                                                           
Query: 1       atggactgaggtgcaagcgtgagctctggagggtccagtatgcattgagcaggatccgna 60
               ||||||||||||||||||||||||| ||| | || |||||||| |||||| | ||||| |
Sbjct: 2969348 atggactgaggtgcaagcgtgagctgtggcgtgttcagtatgctttgagccgtatccgta 2969407

                                                       
Query: 61      atgctgcaaggcacttgctcacactggatgagaagaatcc 100
               |   |||||||||  |||||||||| ||||||||||||||
Sbjct: 2969408 acaatgcaaggcatctgctcacacttgatgagaagaatcc 2969447



 Score = 44.1 bits (22), Expect = 0.073
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                                 
Query: 54       atccgnaatgctgcaaggcacttgctcacactggatgagaagaatcccc 102
                ||||| |||||||||||| |  ||||||| || ||||||||||| ||||
Sbjct: 14839447 atccgcaatgctgcaagggagctgctcacccttgatgagaagaaccccc 14839495
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>dbj|AK104761.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-H02, full
           insert sequence
          Length = 884

 Score = 89.7 bits (45), Expect = 1e-15
 Identities = 86/100 (86%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggactgaggtgcaagcgtgagctctggagggtccagtatgcattgagcaggatccgna 60
           ||||||||||||||||||||||||| ||| | || |||||||| |||||| | ||||| |
Sbjct: 171 atggactgaggtgcaagcgtgagctgtggcgtgttcagtatgctttgagccgtatccgta 230

                                                   
Query: 61  atgctgcaaggcacttgctcacactggatgagaagaatcc 100
           |   |||||||||  |||||||||| ||||||||||||||
Sbjct: 231 acaatgcaaggcatctgctcacacttgatgagaagaatcc 270
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>dbj|AK104265.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-G01, full
           insert sequence
          Length = 884

 Score = 89.7 bits (45), Expect = 1e-15
 Identities = 86/100 (86%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggactgaggtgcaagcgtgagctctggagggtccagtatgcattgagcaggatccgna 60
           ||||||||||||||||||||||||| ||| | || |||||||| |||||| | ||||| |
Sbjct: 171 atggactgaggtgcaagcgtgagctgtggcgtgttcagtatgctttgagccgtatccgta 230

                                                   
Query: 61  atgctgcaaggcacttgctcacactggatgagaagaatcc 100
           |   |||||||||  |||||||||| ||||||||||||||
Sbjct: 231 acaatgcaaggcatctgctcacacttgatgagaagaatcc 270
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>dbj|AK104111.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-G08, full
           insert sequence
          Length = 970

 Score = 89.7 bits (45), Expect = 1e-15
 Identities = 86/100 (86%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggactgaggtgcaagcgtgagctctggagggtccagtatgcattgagcaggatccgna 60
           ||||||||||||||||||||||||| ||| | || |||||||| |||||| | ||||| |
Sbjct: 174 atggactgaggtgcaagcgtgagctgtggcgtgttcagtatgctttgagccgtatccgta 233

                                                   
Query: 61  atgctgcaaggcacttgctcacactggatgagaagaatcc 100
           |   |||||||||  |||||||||| ||||||||||||||
Sbjct: 234 acaatgcaaggcatctgctcacacttgatgagaagaatcc 273
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>dbj|AK061350.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-F09, full
           insert sequence
          Length = 972

 Score = 89.7 bits (45), Expect = 1e-15
 Identities = 86/100 (86%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggactgaggtgcaagcgtgagctctggagggtccagtatgcattgagcaggatccgna 60
           ||||||||||||||||||||||||| ||| | || |||||||| |||||| | ||||| |
Sbjct: 171 atggactgaggtgcaagcgtgagctgtggcgtgttcagtatgctttgagccgtatccgta 230

                                                   
Query: 61  atgctgcaaggcacttgctcacactggatgagaagaatcc 100
           |   |||||||||  |||||||||| ||||||||||||||
Sbjct: 231 acaatgcaaggcatctgctcacacttgatgagaagaatcc 270
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>gb|BT016340.1| Zea mays clone Contig173 mRNA sequence
          Length = 806

 Score = 69.9 bits (35), Expect = 1e-09
 Identities = 85/102 (83%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggactgaggtgcaagcgtgagctctggagggtccagtatgcattgagcaggatccgna 60
           |||| |||||||||||||||||||| ||| | || ||||||||  | ||| | ||||| |
Sbjct: 189 atggcctgaggtgcaagcgtgagctgtggcgtgtgcagtatgccctcagccgcatccgaa 248

                                                     
Query: 61  atgctgcaaggcacttgctcacactggatgagaagaatcccc 102
           ||||||||||| |  ||||||| || ||||||||||| ||||
Sbjct: 249 atgctgcaagggagctgctcacccttgatgagaagaaccccc 290
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>gb|AY105823.1| Zea mays PCO145462 mRNA sequence
          Length = 959

 Score = 69.9 bits (35), Expect = 1e-09
 Identities = 85/102 (83%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggactgaggtgcaagcgtgagctctggagggtccagtatgcattgagcaggatccgna 60
           |||| |||||||||||||||||||| ||| | || ||||||||  | ||| | ||||| |
Sbjct: 198 atggcctgaggtgcaagcgtgagctgtggcgtgtgcagtatgccctcagccgcatccgaa 257

                                                     
Query: 61  atgctgcaaggcacttgctcacactggatgagaagaatcccc 102
           ||||||||||| |  ||||||| || ||||||||||| ||||
Sbjct: 258 atgctgcaagggagctgctcacccttgatgagaagaaccccc 299
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>gb|AY106684.1| Zea mays PCO086432 mRNA sequence
          Length = 965

 Score = 60.0 bits (30), Expect = 1e-06
 Identities = 80/97 (82%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggactgaggtgcaagcgtgagctctggagggtccagtatgcattgagcaggatccgna 60
           |||| ||| |||||||||||||||| ||| | || ||||||||  ||||| | ||| | |
Sbjct: 215 atggcctgcggtgcaagcgtgagctgtggcgcgtgcagtatgccctgagccgtatcagga 274

                                                
Query: 61  atgctgcaaggcacttgctcacactggatgagaagaa 97
           |||| || ||| | |||||||| ||||||||||||||
Sbjct: 275 atgcagccagggagttgctcaccctggatgagaagaa 311
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>gb|BT013198.1| Lycopersicon esculentum clone 134354R, mRNA sequence
          Length = 963

 Score = 54.0 bits (27), Expect = 8e-05
 Identities = 59/70 (84%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggactgaggtgcaagcgtgagctctggagggtccagtatgcattgagcaggatccgna 60
           ||||||||||||||||| | ||| | ||||| || |||||||| |||||| | ||| | |
Sbjct: 185 atggactgaggtgcaagagggagttgtggagagttcagtatgctttgagccgtatcagga 244

                     
Query: 61  atgctgcaag 70
           ||||||||||
Sbjct: 245 atgctgcaag 254
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>gb|DQ200374.1| Solanum tuberosum clone 059F12 unknown mRNA
          Length = 875

 Score = 46.1 bits (23), Expect = 0.019
 Identities = 58/70 (82%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggactgaggtgcaagcgtgagctctggagggtccagtatgcattgagcaggatccgna 60
           ||||||||||||||||  | ||| | ||||| || |||||||| |||||| | ||| | |
Sbjct: 179 atggactgaggtgcaaaagggagttgtggagagttcagtatgctttgagccgtatcagga 238

                     
Query: 61  atgctgcaag 70
           ||||||||||
Sbjct: 239 atgctgcaag 248
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>gb|BT014007.1| Lycopersicon esculentum clone 133059F, mRNA sequence
          Length = 891

 Score = 46.1 bits (23), Expect = 0.019
 Identities = 58/70 (82%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggactgaggtgcaagcgtgagctctggagggtccagtatgcattgagcaggatccgna 60
           |||| |||||||||||| | ||||| ||||| || |||||||| |||||| | ||| | |
Sbjct: 170 atgggctgaggtgcaagagagagctttggagagttcagtatgccttgagccgtatcagaa 229

                     
Query: 61  atgctgcaag 70
           |||| |||||
Sbjct: 230 atgccgcaag 239
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>gb|BT016876.1| Zea mays clone Contig709 mRNA sequence
          Length = 969

 Score = 44.1 bits (22), Expect = 0.073
 Identities = 78/97 (80%)
 Strand = Plus / Minus

                                                                       
Query: 1   atggactgaggtgcaagcgtgagctctggagggtccagtatgcattgagcaggatccgna 60
           |||| ||| |||||||||| ||||| ||| | || ||||||||  ||||| | ||| | |
Sbjct: 800 atggcctgcggtgcaagcgcgagctgtggcgcgtgcagtatgccctgagccgtatcagga 741

                                                
Query: 61  atgctgcaaggcacttgctcacactggatgagaagaa 97
           |||| || ||| |  ||||||| ||||||||||||||
Sbjct: 740 atgcagccagggagctgctcaccctggatgagaagaa 704
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>gb|AC084762.8| Oryza sativa chromosome 3 BAC OSJNBa0013O08 genomic sequence, complete
             sequence
          Length = 148021

 Score = 44.1 bits (22), Expect = 0.073
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                              
Query: 54    atccgnaatgctgcaaggcacttgctcacactggatgagaagaatcccc 102
             ||||| |||||||||||| |  ||||||| || ||||||||||| ||||
Sbjct: 87855 atccgcaatgctgcaagggagctgctcacccttgatgagaagaaccccc 87807
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>dbj|AK064760.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-H01, full
           insert sequence
          Length = 989

 Score = 44.1 bits (22), Expect = 0.073
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                            
Query: 54  atccgnaatgctgcaaggcacttgctcacactggatgagaagaatcccc 102
           ||||| |||||||||||| |  ||||||| || ||||||||||| ||||
Sbjct: 254 atccgcaatgctgcaagggagctgctcacccttgatgagaagaaccccc 302
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>emb|AJ749993.1| Catharanthus roseus mRNA for 40S ribosomal protein S9 (rps9 gene)
          Length = 939

 Score = 42.1 bits (21), Expect = 0.29
 Identities = 53/64 (82%)
 Strand = Plus / Plus

                                                                       
Query: 7   tgaggtgcaagcgtgagctctggagggtccagtatgcattgagcaggatccgnaatgctg 66
           ||||||||||| | ||||| |||||||| || ||||  |||||| | ||| | |||||||
Sbjct: 205 tgaggtgcaagagggagctttggagggttcaatatgttttgagccgtatcagaaatgctg 264

               
Query: 67  caag 70
           ||||
Sbjct: 265 caag 268
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>gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete sequence
          Length = 108028

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 81    acactggatgagaagaatcc 100
             ||||||||||||||||||||
Sbjct: 53973 acactggatgagaagaatcc 53992
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>emb|CT030165.7| M.truncatula DNA sequence from clone MTH2-150K22 on chromosome 3,
             complete sequence
          Length = 134390

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 81    acactggatgagaagaatcc 100
             ||||||||||||||||||||
Sbjct: 17265 acactggatgagaagaatcc 17246
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>ref|NM_121524.3| Arabidopsis thaliana structural constituent of ribosome AT5G15200
           mRNA, complete cds
          Length = 885

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 14  caagcgtgagctctggagggtccagta 40
           |||||||||||||||||| || |||||
Sbjct: 167 caagcgtgagctctggagagtgcagta 193
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>gb|AC151815.1| Solanum demissum chromosome 5 clone PGEC472P22 map MAP_LOC, complete
              sequence
          Length = 136150

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 57/70 (81%)
 Strand = Plus / Plus

                                                                          
Query: 1      atggactgaggtgcaagcgtgagctctggagggtccagtatgcattgagcaggatccgna 60
              |||||||| |||||||  | ||| | ||||| || |||||||| |||||| | ||| | |
Sbjct: 119936 atggactgcggtgcaaaagggagttgtggagagttcagtatgctttgagccgtatcagga 119995

                        
Query: 61     atgctgcaag 70
              ||||||||||
Sbjct: 119996 atgctgcaag 120005
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>gb|AY528719.1| Homo sapiens estrogen-related receptor gamma (ESRRG) gene, complete cds
          Length = 590284

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 60     aatgctgcaaggcacttgc 78
              |||||||||||||||||||
Sbjct: 266843 aatgctgcaaggcacttgc 266825
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>gb|BT011315.1| Arabidopsis thaliana At5g15200 gene, complete cds
          Length = 597

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 14  caagcgtgagctctggagggtccagta 40
           |||||||||||||||||| || |||||
Sbjct: 120 caagcgtgagctctggagagtgcagta 146
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>gb|BT010847.1| Arabidopsis thaliana At5g15200 mRNA, complete cds
          Length = 745

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 14  caagcgtgagctctggagggtccagta 40
           |||||||||||||||||| || |||||
Sbjct: 146 caagcgtgagctctggagagtgcagta 172
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>gb|AC111092.10| Mus musculus chromosome 12, clone RP23-168O9, complete sequence
          Length = 211926

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 80    cacactggatgagaagaat 98
             |||||||||||||||||||
Sbjct: 76005 cacactggatgagaagaat 75987
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>emb|AL603752.6| Human DNA sequence from clone RP11-296A1 on chromosome 1 Contains
            part of the ESRRG gene for  estrogen-related receptor
            gamma, complete sequence
          Length = 48868

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 60   aatgctgcaaggcacttgc 78
            |||||||||||||||||||
Sbjct: 6507 aatgctgcaaggcacttgc 6525
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>emb|AL583807.20| Human DNA sequence from clone RP11-105C7 on chromosome 9 Contains the
             5' end of the LAMC3 gene for laminin gamma 3 and a CpG
             island, complete sequence
          Length = 92607

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 20    tgagctctggagggtccag 38
             |||||||||||||||||||
Sbjct: 49972 tgagctctggagggtccag 49990
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>emb|AL157833.14| Human DNA sequence from clone RP11-205K10 on chromosome 10 Contains
             part of the KCNMA1 gene for potassium large conductance
             calcium-activated channel subfamily M alpha member 1,
             complete sequence
          Length = 21344

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 73    acttgctcacactggatga 91
             |||||||||||||||||||
Sbjct: 16033 acttgctcacactggatga 16015
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>emb|AL353993.1|ATF8M21 Arabidopsis thaliana DNA chromosome 5, BAC clone F8M21 (ESSA project)
          Length = 103996

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 14    caagcgtgagctctggagggtccagta 40
             |||||||||||||||||| || |||||
Sbjct: 39865 caagcgtgagctctggagagtgcagta 39839
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>gb|AC123595.1| Homo sapiens chromosome 5 clone RP11-213H15, complete sequence
          Length = 174874

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 62     tgctgcaaggcacttgctcacac 84
              |||||||||||| ||||||||||
Sbjct: 169943 tgctgcaaggcagttgctcacac 169921
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>gb|AC079845.31| Mus musculus clone rp23-461a12, complete sequence
          Length = 206117

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 21     gagctctggagggtccagt 39
              |||||||||||||||||||
Sbjct: 120298 gagctctggagggtccagt 120316
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>gb|AC093281.2| Homo sapiens chromosome 5 clone RP11-414H23, complete sequence
          Length = 167455

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 62     tgctgcaaggcacttgctcacac 84
              |||||||||||| ||||||||||
Sbjct: 133987 tgctgcaaggcagttgctcacac 134009
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>emb|BX829588.1|CNS0A17H Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB23ZA06 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 803

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 14  caagcgtgagctctggagggtccagta 40
           |||||||||||||||||| || |||||
Sbjct: 161 caagcgtgagctctggagagtgcagta 187
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>gb|AF154636.1| Nicotiana tabacum clone PR5 mRNA sequence
          Length = 673

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 42/50 (84%)
 Strand = Plus / Plus

                                                            
Query: 21 gagctctggagggtccagtatgcattgagcaggatccgnaatgctgcaag 70
          ||||| ||||| || |||||||| |||||| | ||| | |||||||||||
Sbjct: 14 gagctttggagagttcagtatgccttgagccgtatcaggaatgctgcaag 63
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>emb|BX470129.4| Zebrafish DNA sequence from clone CH211-172B19 in linkage group 20,
             complete sequence
          Length = 32358

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 80    cacactggatgagaagaatcccc 102
             ||||||||||||||||| |||||
Sbjct: 23136 cacactggatgagaagattcccc 23158
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>gb|AC159324.2| Mus musculus BAC clone RP23-9D1 from chromosome 12, complete sequence
          Length = 207280

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 80     cacactggatgagaagaat 98
              |||||||||||||||||||
Sbjct: 178236 cacactggatgagaagaat 178218
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>gb|AC079832.18| Mus musculus strain C57BL/6J chromosome 3 clone rp23-393j8, complete
              sequence
          Length = 194354

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 21     gagctctggagggtccagt 39
              |||||||||||||||||||
Sbjct: 120129 gagctctggagggtccagt 120147
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>emb|AL807793.7| Mouse DNA sequence from clone RP23-33N15 on chromosome 2, complete
             sequence
          Length = 221903

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 17    gcgtgagctctggagggtc 35
             |||||||||||||||||||
Sbjct: 20832 gcgtgagctctggagggtc 20850


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 676,488
Number of Sequences: 3902068
Number of extensions: 676488
Number of successful extensions: 42250
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 42156
Number of HSP's gapped (non-prelim): 94
length of query: 102
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 81
effective length of database: 17,151,101,840
effective search space: 1389239249040
effective search space used: 1389239249040
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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