ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd18h22 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_463690.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1371 Score = 688 bits (347), Expect = 0.0 Identities = 497/547 (90%) Strand = Plus / Plus Query: 5 tcagcaagtattggaaggagcggatcagcgttccggtgatcatttcccttgcaaagggga 64 |||||||||| ||||||||||||||||||||||||||||| || || || |||||||||| Sbjct: 515 tcagcaagtactggaaggagcggatcagcgttccggtgataatctcgctcgcaaagggga 574 Query: 65 tagaagcctccttggacccaattcctcgtatcatcacgcctacacaaatgatcagctctg 124 ||||||| |||||||||||||||||||||||||| ||||| || || ||||| || |||| Sbjct: 575 tagaagcatccttggacccaattcctcgtatcattacgcccacgcagatgattagttctg 634 Query: 125 cagctggcgttccaactgagaatatactctatcttggaggcccaaacattgcctcagaaa 184 || |||| |||||||||||||||||||| ||||||||||||||||||||||||||||| | Sbjct: 635 caactggagttccaactgagaatatactatatcttggaggcccaaacattgcctcagaga 694 Query: 185 tttataacaaggaatatgcaaatgctcgaatctgcggatccaccaagtggaggaaacctc 244 |||||||||| ||||||||||||||||||||||| || |||| ||||||||||||||||| Sbjct: 695 tttataacaaagaatatgcaaatgctcgaatctgtgggtccaacaagtggaggaaacctc 754 Query: 245 ttgctaagtttcttagacaaccgcatttcattgtttgggataacagtgacattgttactc 304 | ||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||| | Sbjct: 755 tcgctaagtttctgagacaaccacatttcattgtctgggataacagtgatcttgttacac 814 Query: 305 atgaggttatgggtggcctgaagaatgtatatgctattggtgctggaatggtggcagctt 364 ||||||| |||||||| |||||||||| || || || |||||||||||||| ||||||| Sbjct: 815 atgaggtgatgggtggtttgaagaatgtctacgccatcggtgctggaatggttgcagctt 874 Query: 365 taacaaacgagagtgcaacaagcaaatcagtgtattttgctcactgcacgtcagagatga 424 |||| || ||||||||||||||||| || |||||||||||||| |||||||||||||||| Sbjct: 875 taactaatgagagtgcaacaagcaagtcggtgtattttgctcattgcacgtcagagatga 934 Query: 425 tattcattacccatctactgacagaacagccagagaaacttgccggccctctgctggctg 484 |||||||||| ||| | || |||||||| || ||||||||||| |||||||||||||||| Sbjct: 935 tattcattactcatttgctcacagaacaacctgagaaacttgctggccctctgctggctg 994 Query: 485 atacttatgtaactctcctaaaaggtcgcaatgcatggtatgggcaaatgctagcgaagg 544 |||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 995 atacttatgttactctcctgaaaggtcgcaatgcgtggtatgggcaaatgctagcgaagg 1054 Query: 545 gagaact 551 ||||||| Sbjct: 1055 gagaact 1061
>dbj|AK068569.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154E21, full insert sequence Length = 2080 Score = 688 bits (347), Expect = 0.0 Identities = 497/547 (90%) Strand = Plus / Plus Query: 5 tcagcaagtattggaaggagcggatcagcgttccggtgatcatttcccttgcaaagggga 64 |||||||||| ||||||||||||||||||||||||||||| || || || |||||||||| Sbjct: 998 tcagcaagtactggaaggagcggatcagcgttccggtgataatctcgctcgcaaagggga 1057 Query: 65 tagaagcctccttggacccaattcctcgtatcatcacgcctacacaaatgatcagctctg 124 ||||||| |||||||||||||||||||||||||| ||||| || || ||||| || |||| Sbjct: 1058 tagaagcatccttggacccaattcctcgtatcattacgcccacgcagatgattagttctg 1117 Query: 125 cagctggcgttccaactgagaatatactctatcttggaggcccaaacattgcctcagaaa 184 || |||| |||||||||||||||||||| ||||||||||||||||||||||||||||| | Sbjct: 1118 caactggagttccaactgagaatatactatatcttggaggcccaaacattgcctcagaga 1177 Query: 185 tttataacaaggaatatgcaaatgctcgaatctgcggatccaccaagtggaggaaacctc 244 |||||||||| ||||||||||||||||||||||| || |||| ||||||||||||||||| Sbjct: 1178 tttataacaaagaatatgcaaatgctcgaatctgtgggtccaacaagtggaggaaacctc 1237 Query: 245 ttgctaagtttcttagacaaccgcatttcattgtttgggataacagtgacattgttactc 304 | ||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||| | Sbjct: 1238 tcgctaagtttctgagacaaccacatttcattgtctgggataacagtgatcttgttacac 1297 Query: 305 atgaggttatgggtggcctgaagaatgtatatgctattggtgctggaatggtggcagctt 364 ||||||| |||||||| |||||||||| || || || |||||||||||||| ||||||| Sbjct: 1298 atgaggtgatgggtggtttgaagaatgtctacgccatcggtgctggaatggttgcagctt 1357 Query: 365 taacaaacgagagtgcaacaagcaaatcagtgtattttgctcactgcacgtcagagatga 424 |||| || ||||||||||||||||| || |||||||||||||| |||||||||||||||| Sbjct: 1358 taactaatgagagtgcaacaagcaagtcggtgtattttgctcattgcacgtcagagatga 1417 Query: 425 tattcattacccatctactgacagaacagccagagaaacttgccggccctctgctggctg 484 |||||||||| ||| | || |||||||| || ||||||||||| |||||||||||||||| Sbjct: 1418 tattcattactcatttgctcacagaacaacctgagaaacttgctggccctctgctggctg 1477 Query: 485 atacttatgtaactctcctaaaaggtcgcaatgcatggtatgggcaaatgctagcgaagg 544 |||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 1478 atacttatgttactctcctgaaaggtcgcaatgcgtggtatgggcaaatgctagcgaagg 1537 Query: 545 gagaact 551 ||||||| Sbjct: 1538 gagaact 1544
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 285 bits (144), Expect = 8e-74 Identities = 207/228 (90%) Strand = Plus / Plus Query: 123 tgcagctggcgttccaactgagaatatactctatcttggaggcccaaacattgcctcaga 182 ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 41240071 tgcagctggagttccaactgagaatatactatatcttggaggcccaaacattgcctcaga 41240130 Query: 183 aatttataacaaggaatatgcaaatgctcgaatctgcggatccaccaagtggaggaaacc 242 ||||||||||| ||||||||||||||||||||||| || |||| ||||||||||||||| Sbjct: 41240131 gatttataacaaagaatatgcaaatgctcgaatctgtgggtccaacaagtggaggaaacc 41240190 Query: 243 tcttgctaagtttcttagacaaccgcatttcattgtttgggataacagtgacattgttac 302 ||| ||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||| Sbjct: 41240191 tctcgctaagtttctgagacaaccacatttcattgtctgggataacagtgatcttgttac 41240250 Query: 303 tcatgaggttatgggtggcctgaagaatgtatatgctattggtgctgg 350 |||||||| |||||||| |||||||||| || || || |||||||| Sbjct: 41240251 acatgaggtgatgggtggtttgaagaatgtctacgccatcggtgctgg 41240298 Score = 276 bits (139), Expect = 8e-71 Identities = 187/203 (92%) Strand = Plus / Plus Query: 349 ggaatggtggcagctttaacaaacgagagtgcaacaagcaaatcagtgtattttgctcac 408 |||||||| ||||||||||| || ||||||||||||||||| || |||||||||||||| Sbjct: 41240908 ggaatggttgcagctttaactaatgagagtgcaacaagcaagtcggtgtattttgctcat 41240967 Query: 409 tgcacgtcagagatgatattcattacccatctactgacagaacagccagagaaacttgcc 468 |||||||||||||||||||||||||| ||| | || |||||||| || ||||||||||| Sbjct: 41240968 tgcacgtcagagatgatattcattactcatttgctcacagaacaacctgagaaacttgct 41241027 Query: 469 ggccctctgctggctgatacttatgtaactctcctaaaaggtcgcaatgcatggtatggg 528 |||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||| Sbjct: 41241028 ggccctctgctggctgatacttatgttactctcctgaaaggtcgcaatgcgtggtatggg 41241087 Query: 529 caaatgctagcgaagggagaact 551 ||||||||||||||||||||||| Sbjct: 41241088 caaatgctagcgaagggagaact 41241110 Score = 147 bits (74), Expect = 5e-32 Identities = 110/122 (90%) Strand = Plus / Plus Query: 5 tcagcaagtattggaaggagcggatcagcgttccggtgatcatttcccttgcaaagggga 64 |||||||||| ||||||||||||||||||||||||||||| || || || |||||||||| Sbjct: 41239024 tcagcaagtactggaaggagcggatcagcgttccggtgataatctcgctcgcaaagggga 41239083 Query: 65 tagaagcctccttggacccaattcctcgtatcatcacgcctacacaaatgatcagctctg 124 ||||||| |||||||||||||||||||||||||| ||||| || || ||||| || |||| Sbjct: 41239084 tagaagcatccttggacccaattcctcgtatcattacgcccacgcagatgattagttctg 41239143 Query: 125 ca 126 || Sbjct: 41239144 ca 41239145 Score = 99.6 bits (50), Expect = 1e-17 Identities = 158/194 (81%) Strand = Plus / Minus Query: 154 tatcttggaggcccaaacattgcctcagaaatttataacaaggaatatgcaaatgctcga 213 |||||||||||||| |||||||| ||||||||||| || || ||||||||||||||||| Sbjct: 33947550 tatcttggaggccctaacattgcttcagaaatttacaataaagaatatgcaaatgctcgt 33947491 Query: 214 atctgcggatccaccaagtggaggaaacctcttgctaagtttcttagacaaccgcatttc 273 || || ||| | ||| ||||| |||||||||||||| ||| | || || || ||||| Sbjct: 33947490 atatgtggagctgacaaatggagaaaacctcttgctaaatttttgaggcagcctcatttt 33947431 Query: 274 attgtttgggataacagtgacattgttactcatgaggttatgggtggcctgaagaatgta 333 ||||| |||||||| ||||| | |||| ||||| || ||||| || |||| ||||| Sbjct: 33947430 attgtatgggataatagtgatctcattacacatgaagtcatgggaggtttgaaaaatgtg 33947371 Query: 334 tatgctattggtgc 347 ||||| |||||||| Sbjct: 33947370 tatgccattggtgc 33947357 Score = 69.9 bits (35), Expect = 9e-09 Identities = 143/179 (79%) Strand = Plus / Minus Query: 352 atggtggcagctttaacaaacgagagtgcaacaagcaaatcagtgtattttgctcactgc 411 |||||||||||| ||||||| ||||||||||| |||||||| || || ||||||| ||| Sbjct: 33946993 atggtggcagctctaacaaatgagagtgcaaccagcaaatccgtttactttgctctttgc 33946934 Query: 412 acgtcagagatgatattcattacccatctactgacagaacagccagagaaacttgccggc 471 || || || ||||| | ||| ||||| || || |||| |||| || |||||||| || Sbjct: 33946933 acatctgaaatgatttacataacccaccttttggaagaagagcctgaaaaacttgctggg 33946874 Query: 472 cctctgctggctgatacttatgtaactctcctaaaaggtcgcaatgcatggtatgggca 530 || | ||||||| |||||||| || | || || ||||| ||||||||||||||||| Sbjct: 33946873 ccattattggctgacacttatgtcacattgctgaagggtcgtaatgcatggtatgggca 33946815 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 aacctcttgctaagtttctt 258 |||||||||||||||||||| Sbjct: 18130816 aacctcttgctaagtttctt 18130835
>dbj|AP003412.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1150F11 Length = 130355 Score = 285 bits (144), Expect = 8e-74 Identities = 207/228 (90%) Strand = Plus / Plus Query: 123 tgcagctggcgttccaactgagaatatactctatcttggaggcccaaacattgcctcaga 182 ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 56986 tgcagctggagttccaactgagaatatactatatcttggaggcccaaacattgcctcaga 57045 Query: 183 aatttataacaaggaatatgcaaatgctcgaatctgcggatccaccaagtggaggaaacc 242 ||||||||||| ||||||||||||||||||||||| || |||| ||||||||||||||| Sbjct: 57046 gatttataacaaagaatatgcaaatgctcgaatctgtgggtccaacaagtggaggaaacc 57105 Query: 243 tcttgctaagtttcttagacaaccgcatttcattgtttgggataacagtgacattgttac 302 ||| ||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||| Sbjct: 57106 tctcgctaagtttctgagacaaccacatttcattgtctgggataacagtgatcttgttac 57165 Query: 303 tcatgaggttatgggtggcctgaagaatgtatatgctattggtgctgg 350 |||||||| |||||||| |||||||||| || || || |||||||| Sbjct: 57166 acatgaggtgatgggtggtttgaagaatgtctacgccatcggtgctgg 57213 Score = 276 bits (139), Expect = 8e-71 Identities = 187/203 (92%) Strand = Plus / Plus Query: 349 ggaatggtggcagctttaacaaacgagagtgcaacaagcaaatcagtgtattttgctcac 408 |||||||| ||||||||||| || ||||||||||||||||| || |||||||||||||| Sbjct: 57823 ggaatggttgcagctttaactaatgagagtgcaacaagcaagtcggtgtattttgctcat 57882 Query: 409 tgcacgtcagagatgatattcattacccatctactgacagaacagccagagaaacttgcc 468 |||||||||||||||||||||||||| ||| | || |||||||| || ||||||||||| Sbjct: 57883 tgcacgtcagagatgatattcattactcatttgctcacagaacaacctgagaaacttgct 57942 Query: 469 ggccctctgctggctgatacttatgtaactctcctaaaaggtcgcaatgcatggtatggg 528 |||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||| Sbjct: 57943 ggccctctgctggctgatacttatgttactctcctgaaaggtcgcaatgcgtggtatggg 58002 Query: 529 caaatgctagcgaagggagaact 551 ||||||||||||||||||||||| Sbjct: 58003 caaatgctagcgaagggagaact 58025 Score = 147 bits (74), Expect = 5e-32 Identities = 110/122 (90%) Strand = Plus / Plus Query: 5 tcagcaagtattggaaggagcggatcagcgttccggtgatcatttcccttgcaaagggga 64 |||||||||| ||||||||||||||||||||||||||||| || || || |||||||||| Sbjct: 55939 tcagcaagtactggaaggagcggatcagcgttccggtgataatctcgctcgcaaagggga 55998 Query: 65 tagaagcctccttggacccaattcctcgtatcatcacgcctacacaaatgatcagctctg 124 ||||||| |||||||||||||||||||||||||| ||||| || || ||||| || |||| Sbjct: 55999 tagaagcatccttggacccaattcctcgtatcattacgcccacgcagatgattagttctg 56058 Query: 125 ca 126 || Sbjct: 56059 ca 56060
>dbj|AP003269.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0504E02 Length = 137468 Score = 285 bits (144), Expect = 8e-74 Identities = 207/228 (90%) Strand = Plus / Plus Query: 123 tgcagctggcgttccaactgagaatatactctatcttggaggcccaaacattgcctcaga 182 ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 137126 tgcagctggagttccaactgagaatatactatatcttggaggcccaaacattgcctcaga 137185 Query: 183 aatttataacaaggaatatgcaaatgctcgaatctgcggatccaccaagtggaggaaacc 242 ||||||||||| ||||||||||||||||||||||| || |||| ||||||||||||||| Sbjct: 137186 gatttataacaaagaatatgcaaatgctcgaatctgtgggtccaacaagtggaggaaacc 137245 Query: 243 tcttgctaagtttcttagacaaccgcatttcattgtttgggataacagtgacattgttac 302 ||| ||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||| Sbjct: 137246 tctcgctaagtttctgagacaaccacatttcattgtctgggataacagtgatcttgttac 137305 Query: 303 tcatgaggttatgggtggcctgaagaatgtatatgctattggtgctgg 350 |||||||| |||||||| |||||||||| || || || |||||||| Sbjct: 137306 acatgaggtgatgggtggtttgaagaatgtctacgccatcggtgctgg 137353 Score = 147 bits (74), Expect = 5e-32 Identities = 110/122 (90%) Strand = Plus / Plus Query: 5 tcagcaagtattggaaggagcggatcagcgttccggtgatcatttcccttgcaaagggga 64 |||||||||| ||||||||||||||||||||||||||||| || || || |||||||||| Sbjct: 136079 tcagcaagtactggaaggagcggatcagcgttccggtgataatctcgctcgcaaagggga 136138 Query: 65 tagaagcctccttggacccaattcctcgtatcatcacgcctacacaaatgatcagctctg 124 ||||||| |||||||||||||||||||||||||| ||||| || || ||||| || |||| Sbjct: 136139 tagaagcatccttggacccaattcctcgtatcattacgcccacgcagatgattagttctg 136198 Query: 125 ca 126 || Sbjct: 136199 ca 136200
>dbj|AK101484.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041G24, full insert sequence Length = 2029 Score = 184 bits (93), Expect = 2e-43 Identities = 342/425 (80%) Strand = Plus / Plus Query: 106 acacaaatgatcagctctgcagctggcgttccaactgagaatatactctatcttggaggc 165 ||||| ||||||||| |||| |||| |||||| |||||||| || ||||||||||| Sbjct: 1083 acacagatgatcagcaatgcaactggagttccattggagaatattctatatcttggaggt 1142 Query: 166 ccaaacattgcctcagaaatttataacaaggaatatgcaaatgctcgaatctgcggatcc 225 || |||||||| || || || |||||||| ||||||||||||||||| || || ||| | Sbjct: 1143 cctaacattgcatctgagatatataacaaagaatatgcaaatgctcgcatatgtggagct 1202 Query: 226 accaagtggaggaaacctcttgctaagtttcttagacaaccgcatttcattgtttgggat 285 ||||||||| |||||||| ||||| ||||| || || || ||||| ||||| |||||| Sbjct: 1203 gacaagtggagaaaacctctagctaaatttctgaggcagcctcattttattgtgtgggat 1262 Query: 286 aacagtgacattgttactcatgaggttatgggtggcctgaagaatgtatatgctattggt 345 || ||||| | | |||||||| || ||||| ||| | ||||| ||||||| |||||| Sbjct: 1263 aatagtgatctcatcactcatgaagtaatgggcggcttaaagaacatatatgccattggt 1322 Query: 346 gctggaatggtggcagctttaacaaacgagagtgcaacaagcaaatcagtgtattttgct 405 ||||| |||||||| || |||| || ||||||||||| |||||||| || || ||| | Sbjct: 1323 gctggtatggtggctgcactaaccaatgagagtgcaaccagcaaatcggtttacttttca 1382 Query: 406 cactgcacgtcagagatgatattcattacccatctactgacagaacagccagagaaactt 465 | |||||||| || ||||||| ||| |||||||| || | ||| | || ||||||||| Sbjct: 1383 ctttgcacgtctgaaatgatatacatcacccatctcctagccgaagaccctgagaaactt 1442 Query: 466 gccggccctctgctggctgatacttatgtaactctcctaaaaggtcgcaatgcatggtat 525 ||||| ||| | | || ||||| |||||||| || || |||||||| |||||||||||| Sbjct: 1443 gccgggcctttattagccgatacctatgtaacactgctgaaaggtcgtaatgcatggtat 1502 Query: 526 gggca 530 ||||| Sbjct: 1503 gggca 1507
>ref|NM_129717.3| Arabidopsis thaliana glycerol-3-phosphate dehydrogenase (NAD+) AT2G41540 transcript variant AT2G41540.1 mRNA, complete cds Length = 2712 Score = 182 bits (92), Expect = 9e-43 Identities = 317/392 (80%) Strand = Plus / Plus Query: 154 tatcttggaggcccaaacattgcctcagaaatttataacaaggaatatgcaaatgctcga 213 |||||||| || ||||||||||| | |||||||| |||||||||||||| |||||| || Sbjct: 837 tatcttggtggaccaaacattgctgctgaaatttacaacaaggaatatgccaatgctaga 896 Query: 214 atctgcggatccaccaagtggaggaaacctcttgctaagtttcttagacaaccgcatttc 273 ||||| ||| | | || |||||||| || || |||||||| | |||||||| |||||| Sbjct: 897 atctgtggagctgctaaatggaggaagccactagctaagttcttaagacaacctcatttc 956 Query: 274 attgtttgggataacagtgacattgttactcatgaggttatgggtggcctgaagaatgta 333 ||||||||||| || ||||| |||| || ||||| || ||||| || || |||||||| Sbjct: 957 attgtttgggacaatagtgatcttgtgacacatgaagtaatgggaggtctcaagaatgtc 1016 Query: 334 tatgctattggtgctggaatggtggcagctttaacaaacgagagtgcaacaagcaaatca 393 || || ||||| ||||| ||||| || || | || |||||||| || |||||||| || Sbjct: 1017 tacgccattggagctggtatggtagcggcgctcactaacgagagcgctacaagcaagtcg 1076 Query: 394 gtgtattttgctcactgcacgtcagagatgatattcattacccatctactgacagaacag 453 |||||||||||||| || || || ||||||||||| || || ||| |||| ||||| || Sbjct: 1077 gtgtattttgctcattgtacatctgagatgatatttataactcatttactagcagaagag 1136 Query: 454 ccagagaaacttgccggccctctgctggctgatacttatgtaactctcctaaaaggtcgc 513 || ||||||||||| || ||| |||| ||||| |||||||| || | ||||||| || Sbjct: 1137 cctgagaaacttgcagggcctttgctagctgacacttatgtgaccttattaaaaggacgt 1196 Query: 514 aatgcatggtatgggcaaatgctagcgaaggg 545 ||||||||||| || |||||||| || ||||| Sbjct: 1197 aatgcatggtacggtcaaatgctggcaaaggg 1228
>ref|NM_001036448.1| Arabidopsis thaliana glycerol-3-phosphate dehydrogenase (NAD+) AT2G41540 transcript variant AT2G41540.3 mRNA, complete cds Length = 2771 Score = 182 bits (92), Expect = 9e-43 Identities = 317/392 (80%) Strand = Plus / Plus Query: 154 tatcttggaggcccaaacattgcctcagaaatttataacaaggaatatgcaaatgctcga 213 |||||||| || ||||||||||| | |||||||| |||||||||||||| |||||| || Sbjct: 933 tatcttggtggaccaaacattgctgctgaaatttacaacaaggaatatgccaatgctaga 992 Query: 214 atctgcggatccaccaagtggaggaaacctcttgctaagtttcttagacaaccgcatttc 273 ||||| ||| | | || |||||||| || || |||||||| | |||||||| |||||| Sbjct: 993 atctgtggagctgctaaatggaggaagccactagctaagttcttaagacaacctcatttc 1052 Query: 274 attgtttgggataacagtgacattgttactcatgaggttatgggtggcctgaagaatgta 333 ||||||||||| || ||||| |||| || ||||| || ||||| || || |||||||| Sbjct: 1053 attgtttgggacaatagtgatcttgtgacacatgaagtaatgggaggtctcaagaatgtc 1112 Query: 334 tatgctattggtgctggaatggtggcagctttaacaaacgagagtgcaacaagcaaatca 393 || || ||||| ||||| ||||| || || | || |||||||| || |||||||| || Sbjct: 1113 tacgccattggagctggtatggtagcggcgctcactaacgagagcgctacaagcaagtcg 1172 Query: 394 gtgtattttgctcactgcacgtcagagatgatattcattacccatctactgacagaacag 453 |||||||||||||| || || || ||||||||||| || || ||| |||| ||||| || Sbjct: 1173 gtgtattttgctcattgtacatctgagatgatatttataactcatttactagcagaagag 1232 Query: 454 ccagagaaacttgccggccctctgctggctgatacttatgtaactctcctaaaaggtcgc 513 || ||||||||||| || ||| |||| ||||| |||||||| || | ||||||| || Sbjct: 1233 cctgagaaacttgcagggcctttgctagctgacacttatgtgaccttattaaaaggacgt 1292 Query: 514 aatgcatggtatgggcaaatgctagcgaaggg 545 ||||||||||| || |||||||| || ||||| Sbjct: 1293 aatgcatggtacggtcaaatgctggcaaaggg 1324
>ref|NM_180021.2| Arabidopsis thaliana glycerol-3-phosphate dehydrogenase (NAD+) AT2G41540 transcript variant AT2G41540.2 mRNA, complete cds Length = 3028 Score = 182 bits (92), Expect = 9e-43 Identities = 317/392 (80%) Strand = Plus / Plus Query: 154 tatcttggaggcccaaacattgcctcagaaatttataacaaggaatatgcaaatgctcga 213 |||||||| || ||||||||||| | |||||||| |||||||||||||| |||||| || Sbjct: 1153 tatcttggtggaccaaacattgctgctgaaatttacaacaaggaatatgccaatgctaga 1212 Query: 214 atctgcggatccaccaagtggaggaaacctcttgctaagtttcttagacaaccgcatttc 273 ||||| ||| | | || |||||||| || || |||||||| | |||||||| |||||| Sbjct: 1213 atctgtggagctgctaaatggaggaagccactagctaagttcttaagacaacctcatttc 1272 Query: 274 attgtttgggataacagtgacattgttactcatgaggttatgggtggcctgaagaatgta 333 ||||||||||| || ||||| |||| || ||||| || ||||| || || |||||||| Sbjct: 1273 attgtttgggacaatagtgatcttgtgacacatgaagtaatgggaggtctcaagaatgtc 1332 Query: 334 tatgctattggtgctggaatggtggcagctttaacaaacgagagtgcaacaagcaaatca 393 || || ||||| ||||| ||||| || || | || |||||||| || |||||||| || Sbjct: 1333 tacgccattggagctggtatggtagcggcgctcactaacgagagcgctacaagcaagtcg 1392 Query: 394 gtgtattttgctcactgcacgtcagagatgatattcattacccatctactgacagaacag 453 |||||||||||||| || || || ||||||||||| || || ||| |||| ||||| || Sbjct: 1393 gtgtattttgctcattgtacatctgagatgatatttataactcatttactagcagaagag 1452 Query: 454 ccagagaaacttgccggccctctgctggctgatacttatgtaactctcctaaaaggtcgc 513 || ||||||||||| || ||| |||| ||||| |||||||| || | ||||||| || Sbjct: 1453 cctgagaaacttgcagggcctttgctagctgacacttatgtgaccttattaaaaggacgt 1512 Query: 514 aatgcatggtatgggcaaatgctagcgaaggg 545 ||||||||||| || |||||||| || ||||| Sbjct: 1513 aatgcatggtacggtcaaatgctggcaaaggg 1544
>gb|AY091247.1| Arabidopsis thaliana putative glycerol-3-phosphate dehydrogenase (At2g41540) mRNA, complete cds Length = 1420 Score = 182 bits (92), Expect = 9e-43 Identities = 317/392 (80%) Strand = Plus / Plus Query: 154 tatcttggaggcccaaacattgcctcagaaatttataacaaggaatatgcaaatgctcga 213 |||||||| || ||||||||||| | |||||||| |||||||||||||| |||||| || Sbjct: 682 tatcttggtggaccaaacattgctgctgaaatttacaacaaggaatatgccaatgctaga 741 Query: 214 atctgcggatccaccaagtggaggaaacctcttgctaagtttcttagacaaccgcatttc 273 ||||| ||| | | || |||||||| || || |||||||| | |||||||| |||||| Sbjct: 742 atctgtggagctgctaaatggaggaagccactagctaagttcttaagacaacctcatttc 801 Query: 274 attgtttgggataacagtgacattgttactcatgaggttatgggtggcctgaagaatgta 333 ||||||||||| || ||||| |||| || ||||| || ||||| || || |||||||| Sbjct: 802 attgtttgggacaatagtgatcttgtgacacatgaagtaatgggaggtctcaagaatgtc 861 Query: 334 tatgctattggtgctggaatggtggcagctttaacaaacgagagtgcaacaagcaaatca 393 || || ||||| ||||| ||||| || || | || |||||||| || |||||||| || Sbjct: 862 tacgccattggagctggtatggtagcggcgctcactaacgagagcgctacaagcaagtcg 921 Query: 394 gtgtattttgctcactgcacgtcagagatgatattcattacccatctactgacagaacag 453 |||||||||||||| || || || ||||||||||| || || ||| |||| ||||| || Sbjct: 922 gtgtattttgctcattgtacatctgagatgatatttataactcatttactagcagaagag 981 Query: 454 ccagagaaacttgccggccctctgctggctgatacttatgtaactctcctaaaaggtcgc 513 || ||||||||||| || ||| |||| ||||| |||||||| || | ||||||| || Sbjct: 982 cctgagaaacttgcagggcctttgctagctgacacttatgtgaccttattaaaaggacgt 1041 Query: 514 aatgcatggtatgggcaaatgctagcgaaggg 545 ||||||||||| || |||||||| || ||||| Sbjct: 1042 aatgcatggtacggtcaaatgctggcaaaggg 1073
>gb|AY063920.1| Arabidopsis thaliana putative glycerol-3-phosphate dehydrogenase (At2g41540) mRNA, complete cds Length = 2023 Score = 182 bits (92), Expect = 9e-43 Identities = 317/392 (80%) Strand = Plus / Plus Query: 154 tatcttggaggcccaaacattgcctcagaaatttataacaaggaatatgcaaatgctcga 213 |||||||| || ||||||||||| | |||||||| |||||||||||||| |||||| || Sbjct: 1091 tatcttggtggaccaaacattgctgctgaaatttacaacaaggaatatgccaatgctaga 1150 Query: 214 atctgcggatccaccaagtggaggaaacctcttgctaagtttcttagacaaccgcatttc 273 ||||| ||| | | || |||||||| || || |||||||| | |||||||| |||||| Sbjct: 1151 atctgtggagctgctaaatggaggaagccactagctaagttcttaagacaacctcatttc 1210 Query: 274 attgtttgggataacagtgacattgttactcatgaggttatgggtggcctgaagaatgta 333 ||||||||||| || ||||| |||| || ||||| || ||||| || || |||||||| Sbjct: 1211 attgtttgggacaatagtgatcttgtgacacatgaagtaatgggaggtctcaagaatgtc 1270 Query: 334 tatgctattggtgctggaatggtggcagctttaacaaacgagagtgcaacaagcaaatca 393 || || ||||| ||||| ||||| || || | || |||||||| || |||||||| || Sbjct: 1271 tacgccattggagctggtatggtagcggcgctcactaacgagagcgctacaagcaagtcg 1330 Query: 394 gtgtattttgctcactgcacgtcagagatgatattcattacccatctactgacagaacag 453 |||||||||||||| || || || ||||||||||| || || ||| |||| ||||| || Sbjct: 1331 gtgtattttgctcattgtacatctgagatgatatttataactcatttactagcagaagag 1390 Query: 454 ccagagaaacttgccggccctctgctggctgatacttatgtaactctcctaaaaggtcgc 513 || ||||||||||| || ||| |||| ||||| |||||||| || | ||||||| || Sbjct: 1391 cctgagaaacttgcagggcctttgctagctgacacttatgtgaccttattaaaaggacgt 1450 Query: 514 aatgcatggtatgggcaaatgctagcgaaggg 545 ||||||||||| || |||||||| || ||||| Sbjct: 1451 aatgcatggtacggtcaaatgctggcaaaggg 1482
>emb|AJ347019.1|ATH347019 Arabidopsis thaliana mRNA for glycerol-3-phosphate dehydrogenase (gpdhc gene) Length = 1708 Score = 182 bits (92), Expect = 9e-43 Identities = 317/392 (80%) Strand = Plus / Plus Query: 154 tatcttggaggcccaaacattgcctcagaaatttataacaaggaatatgcaaatgctcga 213 |||||||| || ||||||||||| | |||||||| |||||||||||||| |||||| || Sbjct: 837 tatcttggtggaccaaacattgctgctgaaatttacaacaaggaatatgccaatgctaga 896 Query: 214 atctgcggatccaccaagtggaggaaacctcttgctaagtttcttagacaaccgcatttc 273 ||||| ||| | | || |||||||| || || |||||||| | |||||||| |||||| Sbjct: 897 atctgtggagctgctaaatggaggaagccactagctaagttcttaagacaacctcatttc 956 Query: 274 attgtttgggataacagtgacattgttactcatgaggttatgggtggcctgaagaatgta 333 ||||||||||| || ||||| |||| || ||||| || ||||| || || |||||||| Sbjct: 957 attgtttgggacaatagtgatcttgtgacacatgaagtaatgggaggtctcaagaatgtc 1016 Query: 334 tatgctattggtgctggaatggtggcagctttaacaaacgagagtgcaacaagcaaatca 393 || || ||||| ||||| ||||| || || | || |||||||| || |||||||| || Sbjct: 1017 tacgccattggagctggtatggtagcggcgctcactaacgagagcgctacaagcaagtcg 1076 Query: 394 gtgtattttgctcactgcacgtcagagatgatattcattacccatctactgacagaacag 453 |||||||||||||| || || || ||||||||||| || || ||| |||| ||||| || Sbjct: 1077 gtgtattttgctcattgtacatctgagatgatatttataactcatttactagcagaagag 1136 Query: 454 ccagagaaacttgccggccctctgctggctgatacttatgtaactctcctaaaaggtcgc 513 || ||||||||||| || ||| |||| ||||| |||||||| || | ||||||| || Sbjct: 1137 cctgagaaacttgcagggcctttgctagctgacacttatgtgaccttattaaaaggacgt 1196 Query: 514 aatgcatggtatgggcaaatgctagcgaaggg 545 ||||||||||| || |||||||| || ||||| Sbjct: 1197 aatgcatggtacggtcaaatgctggcaaaggg 1228
>ref|NM_190938.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1404 Score = 161 bits (81), Expect = 3e-36 Identities = 303/377 (80%) Strand = Plus / Plus Query: 154 tatcttggaggcccaaacattgcctcagaaatttataacaaggaatatgcaaatgctcga 213 |||||||||||||| |||||||| ||||||||||| || || ||||||||||||||||| Sbjct: 679 tatcttggaggccctaacattgcttcagaaatttacaataaagaatatgcaaatgctcgt 738 Query: 214 atctgcggatccaccaagtggaggaaacctcttgctaagtttcttagacaaccgcatttc 273 || || ||| | ||| ||||| |||||||||||||| ||| | || || || ||||| Sbjct: 739 atatgtggagctgacaaatggagaaaacctcttgctaaatttttgaggcagcctcatttt 798 Query: 274 attgtttgggataacagtgacattgttactcatgaggttatgggtggcctgaagaatgta 333 ||||| |||||||| ||||| | |||| ||||| || ||||| || |||| ||||| Sbjct: 799 attgtatgggataatagtgatctcattacacatgaagtcatgggaggtttgaaaaatgtg 858 Query: 334 tatgctattggtgctggaatggtggcagctttaacaaacgagagtgcaacaagcaaatca 393 ||||| |||||||| || |||||||||||| ||||||| ||||||||||| |||||||| Sbjct: 859 tatgccattggtgccggtatggtggcagctctaacaaatgagagtgcaaccagcaaatcc 918 Query: 394 gtgtattttgctcactgcacgtcagagatgatattcattacccatctactgacagaacag 453 || || ||||||| ||||| || || ||||| | ||| ||||| || || |||| || Sbjct: 919 gtttactttgctctttgcacatctgaaatgatttacataacccaccttttggaagaagag 978 Query: 454 ccagagaaacttgccggccctctgctggctgatacttatgtaactctcctaaaaggtcgc 513 || || |||||||| || || | ||||||| |||||||| || | || || ||||| Sbjct: 979 cctgaaaaacttgctgggccattattggctgacacttatgtcacattgctgaagggtcgt 1038 Query: 514 aatgcatggtatgggca 530 ||||||||||||||||| Sbjct: 1039 aatgcatggtatgggca 1055
>dbj|AK073318.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025P14, full insert sequence Length = 1898 Score = 161 bits (81), Expect = 3e-36 Identities = 303/377 (80%) Strand = Plus / Plus Query: 154 tatcttggaggcccaaacattgcctcagaaatttataacaaggaatatgcaaatgctcga 213 |||||||||||||| |||||||| ||||||||||| || || ||||||||||||||||| Sbjct: 935 tatcttggaggccctaacattgcttcagaaatttacaataaagaatatgcaaatgctcgt 994 Query: 214 atctgcggatccaccaagtggaggaaacctcttgctaagtttcttagacaaccgcatttc 273 || || ||| | ||| ||||| |||||||||||||| ||| | || || || ||||| Sbjct: 995 atatgtggagctgacaaatggagaaaacctcttgctaaatttttgaggcagcctcatttt 1054 Query: 274 attgtttgggataacagtgacattgttactcatgaggttatgggtggcctgaagaatgta 333 ||||| |||||||| ||||| | |||| ||||| || ||||| || |||| ||||| Sbjct: 1055 attgtatgggataatagtgatctcattacacatgaagtcatgggaggtttgaaaaatgtg 1114 Query: 334 tatgctattggtgctggaatggtggcagctttaacaaacgagagtgcaacaagcaaatca 393 ||||| |||||||| || |||||||||||| ||||||| ||||||||||| |||||||| Sbjct: 1115 tatgccattggtgccggtatggtggcagctctaacaaatgagagtgcaaccagcaaatcc 1174 Query: 394 gtgtattttgctcactgcacgtcagagatgatattcattacccatctactgacagaacag 453 || || ||||||| ||||| || || ||||| | ||| ||||| || || |||| || Sbjct: 1175 gtttactttgctctttgcacatctgaaatgatttacataacccaccttttggaagaagag 1234 Query: 454 ccagagaaacttgccggccctctgctggctgatacttatgtaactctcctaaaaggtcgc 513 || || |||||||| || || | ||||||| |||||||| || | || || ||||| Sbjct: 1235 cctgaaaaacttgctgggccattattggctgacacttatgtcacattgctgaagggtcgt 1294 Query: 514 aatgcatggtatgggca 530 ||||||||||||||||| Sbjct: 1295 aatgcatggtatgggca 1311
>ref|NM_111648.3| Arabidopsis thaliana glycerol-3-phosphate dehydrogenase (NAD+) AT3G07690 mRNA, complete cds Length = 1811 Score = 123 bits (62), Expect = 7e-25 Identities = 251/314 (79%) Strand = Plus / Plus Query: 268 catttcattgtttgggataacagtgacattgttactcatgaggttatgggtggcctgaag 327 |||||||| || |||||||| |||||| | |||||||||| || ||||||||| ||||| Sbjct: 899 catttcatagtctgggataatagtgacctcattactcatgaagtaatgggtggcttgaag 958 Query: 328 aatgtatatgctattggtgctggaatggtggcagctttaacaaacgagagtgcaacaagc 387 ||||| ||||| |||||||| ||||||||||| | | || || || ||||| || ||| Sbjct: 959 aatgtttatgccattggtgcaggaatggtggctacactgactaaggaaagtgctaccagc 1018 Query: 388 aaatcagtgtattttgctcactgcacgtcagagatgatattcattacccatctactgaca 447 ||||||||||| ||||| || || || ||||||||||| || ||||| ||| || || | Sbjct: 1019 aaatcagtgtactttgcgcattgtacttcagagatgatttttattactcatttattggcc 1078 Query: 448 gaacagccagagaaacttgccggccctctgctggctgatacttatgtaactctcctaaaa 507 | ||||||||||||| || || ||| |||| || ||||| |||||||| | || ||| Sbjct: 1079 aaggagccagagaaactcgctgggcctttgcttgcggatacctatgtaacattactgaaa 1138 Query: 508 ggtcgcaatgcatggtatgggcaaatgctagcgaagggagaactcaggctcgatatgggt 567 ||||| ||||| ||||| || || | || || || |||||||| || || || |||||| Sbjct: 1139 ggtcgtaatgcgtggtacggccagaaacttgcaaaaggagaacttagccttgaaatgggt 1198 Query: 568 gacagtatcaaagg 581 ||||| |||||||| Sbjct: 1199 gacagcatcaaagg 1212
>gb|AC112160.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1579_G03, complete sequence Length = 121466 Score = 111 bits (56), Expect = 3e-21 Identities = 185/228 (81%) Strand = Plus / Plus Query: 123 tgcagctggcgttccaactgagaatatactctatcttggaggcccaaacattgcctcaga 182 ||||||||| |||||| |||||||| || ||||||||||| || |||||||| || || Sbjct: 100635 tgcagctggagttccattggagaatattctatatcttggaggtcctaacattgcatctga 100694 Query: 183 aatttataacaaggaatatgcaaatgctcgaatctgcggatccaccaagtggaggaaacc 242 || |||||||| ||||||||||||||||| || || ||| | ||||||||| ||||| Sbjct: 100695 gatatataacaaagaatatgcaaatgctcgcatatgtggagctgacaagtggagaaaacc 100754 Query: 243 tcttgctaagtttcttagacaaccgcatttcattgtttgggataacagtgacattgttac 302 ||| ||||| ||||| || || || ||||| ||||| |||||||| ||||| | | || Sbjct: 100755 tctagctaaatttctgaggcagcctcattttattgtgtgggataatagtgatctcatcac 100814 Query: 303 tcatgaggttatgggtggcctgaagaatgtatatgctattggtgctgg 350 |||||| || ||||| ||| | ||||| ||||||| ||||||||||| Sbjct: 100815 tcatgaagtaatgggcggcttaaagaacatatatgccattggtgctgg 100862 Score = 77.8 bits (39), Expect = 4e-11 Identities = 144/179 (80%) Strand = Plus / Plus Query: 352 atggtggcagctttaacaaacgagagtgcaacaagcaaatcagtgtattttgctcactgc 411 |||||||| || |||| || ||||||||||| |||||||| || || ||| | | ||| Sbjct: 101275 atggtggctgcactaaccaatgagagtgcaaccagcaaatcggtttacttttcactttgc 101334 Query: 412 acgtcagagatgatattcattacccatctactgacagaacagccagagaaacttgccggc 471 ||||| || ||||||| ||| |||||||| || | ||| | || |||||||||||||| Sbjct: 101335 acgtctgaaatgatatacatcacccatctcctagccgaagaccctgagaaacttgccggg 101394 Query: 472 cctctgctggctgatacttatgtaactctcctaaaaggtcgcaatgcatggtatgggca 530 ||| | | || ||||| |||||||| || || |||||||| ||||||||||||||||| Sbjct: 101395 cctttattagccgatacctatgtaacactgctgaaaggtcgtaatgcatggtatgggca 101453
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 111 bits (56), Expect = 3e-21 Identities = 185/228 (81%) Strand = Plus / Plus Query: 123 tgcagctggcgttccaactgagaatatactctatcttggaggcccaaacattgcctcaga 182 ||||||||| |||||| |||||||| || ||||||||||| || |||||||| || || Sbjct: 24214397 tgcagctggagttccattggagaatattctatatcttggaggtcctaacattgcatctga 24214456 Query: 183 aatttataacaaggaatatgcaaatgctcgaatctgcggatccaccaagtggaggaaacc 242 || |||||||| ||||||||||||||||| || || ||| | ||||||||| ||||| Sbjct: 24214457 gatatataacaaagaatatgcaaatgctcgcatatgtggagctgacaagtggagaaaacc 24214516 Query: 243 tcttgctaagtttcttagacaaccgcatttcattgtttgggataacagtgacattgttac 302 ||| ||||| ||||| || || || ||||| ||||| |||||||| ||||| | | || Sbjct: 24214517 tctagctaaatttctgaggcagcctcattttattgtgtgggataatagtgatctcatcac 24214576 Query: 303 tcatgaggttatgggtggcctgaagaatgtatatgctattggtgctgg 350 |||||| || ||||| ||| | ||||| ||||||| ||||||||||| Sbjct: 24214577 tcatgaagtaatgggcggcttaaagaacatatatgccattggtgctgg 24214624 Score = 77.8 bits (39), Expect = 4e-11 Identities = 144/179 (80%) Strand = Plus / Plus Query: 352 atggtggcagctttaacaaacgagagtgcaacaagcaaatcagtgtattttgctcactgc 411 |||||||| || |||| || ||||||||||| |||||||| || || ||| | | ||| Sbjct: 24215037 atggtggctgcactaaccaatgagagtgcaaccagcaaatcggtttacttttcactttgc 24215096 Query: 412 acgtcagagatgatattcattacccatctactgacagaacagccagagaaacttgccggc 471 ||||| || ||||||| ||| |||||||| || | ||| | || |||||||||||||| Sbjct: 24215097 acgtctgaaatgatatacatcacccatctcctagccgaagaccctgagaaacttgccggg 24215156 Query: 472 cctctgctggctgatacttatgtaactctcctaaaaggtcgcaatgcatggtatgggca 530 ||| | | || ||||| |||||||| || || |||||||| ||||||||||||||||| Sbjct: 24215157 cctttattagccgatacctatgtaacactgctgaaaggtcgtaatgcatggtatgggca 24215215
>dbj|AK066880.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013087A13, full insert sequence Length = 2858 Score = 111 bits (56), Expect = 3e-21 Identities = 185/228 (81%) Strand = Plus / Plus Query: 123 tgcagctggcgttccaactgagaatatactctatcttggaggcccaaacattgcctcaga 182 ||||||||| |||||| |||||||| || ||||||||||| || |||||||| || || Sbjct: 1280 tgcagctggagttccattggagaatattctatatcttggaggtcctaacattgcatctga 1339 Query: 183 aatttataacaaggaatatgcaaatgctcgaatctgcggatccaccaagtggaggaaacc 242 || |||||||| ||||||||||||||||| || || ||| | ||||||||| ||||| Sbjct: 1340 gatatataacaaagaatatgcaaatgctcgcatatgtggagctgacaagtggagaaaacc 1399 Query: 243 tcttgctaagtttcttagacaaccgcatttcattgtttgggataacagtgacattgttac 302 ||| ||||| ||||| || || || ||||| ||||| |||||||| ||||| | | || Sbjct: 1400 tctagctaaatttctgaggcagcctcattttattgtgtgggataatagtgatctcatcac 1459 Query: 303 tcatgaggttatgggtggcctgaagaatgtatatgctattggtgctgg 350 |||||| || ||||| ||| | ||||| ||||||| ||||||||||| Sbjct: 1460 tcatgaagtaatgggcggcttaaagaacatatatgccattggtgctgg 1507 Score = 77.8 bits (39), Expect = 4e-11 Identities = 144/179 (80%) Strand = Plus / Plus Query: 352 atggtggcagctttaacaaacgagagtgcaacaagcaaatcagtgtattttgctcactgc 411 |||||||| || |||| || ||||||||||| |||||||| || || ||| | | ||| Sbjct: 1920 atggtggctgcactaaccaatgagagtgcaaccagcaaatcggtttacttttcactttgc 1979 Query: 412 acgtcagagatgatattcattacccatctactgacagaacagccagagaaacttgccggc 471 ||||| || ||||||| ||| |||||||| || | ||| | || |||||||||||||| Sbjct: 1980 acgtctgaaatgatatacatcacccatctcctagccgaagaccctgagaaacttgccggg 2039 Query: 472 cctctgctggctgatacttatgtaactctcctaaaaggtcgcaatgcatggtatgggca 530 ||| | | || ||||| |||||||| || || |||||||| ||||||||||||||||| Sbjct: 2040 cctttattagccgatacctatgtaacactgctgaaaggtcgtaatgcatggtatgggca 2098
>gb|AC002510.3| Arabidopsis thaliana chromosome 2 clone T32G6 map CIC11C08, complete sequence Length = 91979 Score = 105 bits (53), Expect = 2e-19 Identities = 161/197 (81%) Strand = Plus / Plus Query: 154 tatcttggaggcccaaacattgcctcagaaatttataacaaggaatatgcaaatgctcga 213 |||||||| || ||||||||||| | |||||||| |||||||||||||| |||||| || Sbjct: 28474 tatcttggtggaccaaacattgctgctgaaatttacaacaaggaatatgccaatgctaga 28533 Query: 214 atctgcggatccaccaagtggaggaaacctcttgctaagtttcttagacaaccgcatttc 273 ||||| ||| | | || |||||||| || || |||||||| | |||||||| |||||| Sbjct: 28534 atctgtggagctgctaaatggaggaagccactagctaagttcttaagacaacctcatttc 28593 Query: 274 attgtttgggataacagtgacattgttactcatgaggttatgggtggcctgaagaatgta 333 ||||||||||| || ||||| |||| || ||||| || ||||| || || |||||||| Sbjct: 28594 attgtttgggacaatagtgatcttgtgacacatgaagtaatgggaggtctcaagaatgtc 28653 Query: 334 tatgctattggtgctgg 350 || || ||||| ||||| Sbjct: 28654 tacgccattggagctgg 28670 Score = 95.6 bits (48), Expect = 2e-16 Identities = 144/176 (81%) Strand = Plus / Plus Query: 370 aacgagagtgcaacaagcaaatcagtgtattttgctcactgcacgtcagagatgatattc 429 |||||||| || |||||||| || |||||||||||||| || || || ||||||||||| Sbjct: 28768 aacgagagcgctacaagcaagtcggtgtattttgctcattgtacatctgagatgatattt 28827 Query: 430 attacccatctactgacagaacagccagagaaacttgccggccctctgctggctgatact 489 || || ||| |||| ||||| |||| ||||||||||| || ||| |||| ||||| ||| Sbjct: 28828 ataactcatttactagcagaagagcctgagaaacttgcagggcctttgctagctgacact 28887 Query: 490 tatgtaactctcctaaaaggtcgcaatgcatggtatgggcaaatgctagcgaaggg 545 ||||| || | ||||||| || ||||||||||| || |||||||| || ||||| Sbjct: 28888 tatgtgaccttattaaaaggacgtaatgcatggtacggtcaaatgctggcaaaggg 28943
>emb|BX820067.1|CNS0AAG2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS70ZB08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1819 Score = 99.6 bits (50), Expect = 1e-17 Identities = 248/314 (78%) Strand = Plus / Plus Query: 232 tggaggaaacctcttgctaagtttcttagacaaccgcatttcattgtttgggataacagt 291 |||||||| || || |||||||| | |||||||| |||||||||| ||||| || ||| Sbjct: 945 tggaggaagccactagctaagttcttaagacaacctcatttcattgcctgggacaatagt 1004 Query: 292 gacattgttactcatgaggttatgggtggcctgaagaatgtatatgctattggtgctgga 351 || |||| || ||||| || ||||| || || |||||||| || || || | || || Sbjct: 1005 gatcttgtgacacatgaagtaatgggaggtctcaagaatgtctacgccatggcagccggt 1064 Query: 352 atggtggcagctttaacaaacgagagtgcaacaagcaaatcagtgtattttgctcactgc 411 ||||| || || | || |||||||| || |||||||| || |||||||||||||| || Sbjct: 1065 atggtagcggcgctcactaacgagagcgctacaagcaagtcggtgtattttgctcattgt 1124 Query: 412 acgtcagagatgatattcattacccatctactgacagaacagccagagaaacttgccggc 471 || || ||||||||||| || || ||| |||| ||||| |||| ||||||||||| || Sbjct: 1125 acatctgagatgatatttataactcatttactagcagaagagcctgagaaacttgcaggg 1184 Query: 472 cctctgctggctgatacttatgtaactctcctaaaaggtcgcaatgcatggtatgggcaa 531 ||| |||| ||||| |||||||| || | ||||||| || ||||||||||| || ||| Sbjct: 1185 cctttgctagctgacacttatgtgaccttattaaaaggacgtaatgcatggtacggtcaa 1244 Query: 532 atgctagcgaaggg 545 ||||| || ||||| Sbjct: 1245 atgctggcaaaggg 1258
>dbj|AP003221.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0003D09 Length = 161970 Score = 99.6 bits (50), Expect = 1e-17 Identities = 158/194 (81%) Strand = Plus / Minus Query: 154 tatcttggaggcccaaacattgcctcagaaatttataacaaggaatatgcaaatgctcga 213 |||||||||||||| |||||||| ||||||||||| || || ||||||||||||||||| Sbjct: 78993 tatcttggaggccctaacattgcttcagaaatttacaataaagaatatgcaaatgctcgt 78934 Query: 214 atctgcggatccaccaagtggaggaaacctcttgctaagtttcttagacaaccgcatttc 273 || || ||| | ||| ||||| |||||||||||||| ||| | || || || ||||| Sbjct: 78933 atatgtggagctgacaaatggagaaaacctcttgctaaatttttgaggcagcctcatttt 78874 Query: 274 attgtttgggataacagtgacattgttactcatgaggttatgggtggcctgaagaatgta 333 ||||| |||||||| ||||| | |||| ||||| || ||||| || |||| ||||| Sbjct: 78873 attgtatgggataatagtgatctcattacacatgaagtcatgggaggtttgaaaaatgtg 78814 Query: 334 tatgctattggtgc 347 ||||| |||||||| Sbjct: 78813 tatgccattggtgc 78800 Score = 69.9 bits (35), Expect = 9e-09 Identities = 143/179 (79%) Strand = Plus / Minus Query: 352 atggtggcagctttaacaaacgagagtgcaacaagcaaatcagtgtattttgctcactgc 411 |||||||||||| ||||||| ||||||||||| |||||||| || || ||||||| ||| Sbjct: 78436 atggtggcagctctaacaaatgagagtgcaaccagcaaatccgtttactttgctctttgc 78377 Query: 412 acgtcagagatgatattcattacccatctactgacagaacagccagagaaacttgccggc 471 || || || ||||| | ||| ||||| || || |||| |||| || |||||||| || Sbjct: 78376 acatctgaaatgatttacataacccaccttttggaagaagagcctgaaaaacttgctggg 78317 Query: 472 cctctgctggctgatacttatgtaactctcctaaaaggtcgcaatgcatggtatgggca 530 || | ||||||| |||||||| || | || || ||||| ||||||||||||||||| Sbjct: 78316 ccattattggctgacacttatgtcacattgctgaagggtcgtaatgcatggtatgggca 78258
>gb|AY110218.1| Zea mays CL6853_1 mRNA sequence Length = 1098 Score = 71.9 bits (36), Expect = 2e-09 Identities = 126/158 (79%) Strand = Plus / Minus Query: 268 catttcattgtttgggataacagtgacattgttactcatgaggttatgggtggcctgaag 327 ||||| ||||| |||||||||||||| | | |||||||| || ||||||||| | Sbjct: 823 cattttattgtgtgggataacagtgatctcatcactcatgaagtcatgggtggcttnnnn 764 Query: 328 aatgtatatgctattggtgctggaatggtggcagctttaacaaacgagagtgcaacaagc 387 ||| ||||||||||||||||| ||||| || || |||| |||||||||||||| ||| Sbjct: 763 nntgtctatgctattggtgctggtatggtagctgcactaaccaacgagagtgcaaccagc 704 Query: 388 aaatcagtgtattttgctcactgcacgtcagagatgat 425 ||||| || || ||||| | ||||| || |||||||| Sbjct: 703 aaatctgtttactttgcactttgcacatctgagatgat 666 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Minus Query: 123 tgcagctggcgttccaactgagaatatactctatcttggaggcccaaacattgcctcaga 182 |||| |||| |||||| | |||||||| || |||||||| || || || ||||| || || Sbjct: 968 tgcaactggagttccatcagagaatattctttatcttggcggacctaatattgcttctga 909 Query: 183 aatttataacaaggaatatgcaaatgc 209 |||||| ||||| |||||||||||||| Sbjct: 908 aatttacaacaaagaatatgcaaatgc 882 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 505 aaaggtcgcaatgcatggtatgggca 530 |||||||| ||||||||||||||||| Sbjct: 586 aaaggtcgtaatgcatggtatgggca 561
>gb|AC009176.5|ATAC009176 Arabidopsis thaliana chromosome III P1 MLP3 genomic sequence, complete sequence Length = 79296 Score = 67.9 bits (34), Expect = 3e-08 Identities = 163/206 (79%) Strand = Plus / Plus Query: 376 agtgcaacaagcaaatcagtgtattttgctcactgcacgtcagagatgatattcattacc 435 ||||| || |||||||||||||| ||||| || || || ||||||||||| || ||||| Sbjct: 44434 agtgctaccagcaaatcagtgtactttgcgcattgtacttcagagatgatttttattact 44493 Query: 436 catctactgacagaacagccagagaaacttgccggccctctgctggctgatacttatgta 495 ||| || || | | ||||||||||||| || || ||| |||| || ||||| |||||| Sbjct: 44494 catttattggccaaggagccagagaaactcgctgggcctttgcttgcggatacctatgta 44553 Query: 496 actctcctaaaaggtcgcaatgcatggtatgggcaaatgctagcgaagggagaactcagg 555 || | || |||||||| ||||| ||||| || || | || || || |||||||| || Sbjct: 44554 acattactgaaaggtcgtaatgcgtggtacggccagaaacttgcaaaaggagaacttagc 44613 Query: 556 ctcgatatgggtgacagtatcaaagg 581 || || ||||||||||| |||||||| Sbjct: 44614 cttgaaatgggtgacagcatcaaagg 44639
>gb|AC013483.7|ATAC013483 Arabidopsis thaliana chromosome III BAC F17A17 genomic sequence, complete sequence Length = 121054 Score = 67.9 bits (34), Expect = 3e-08 Identities = 163/206 (79%) Strand = Plus / Plus Query: 376 agtgcaacaagcaaatcagtgtattttgctcactgcacgtcagagatgatattcattacc 435 ||||| || |||||||||||||| ||||| || || || ||||||||||| || ||||| Sbjct: 9468 agtgctaccagcaaatcagtgtactttgcgcattgtacttcagagatgatttttattact 9527 Query: 436 catctactgacagaacagccagagaaacttgccggccctctgctggctgatacttatgta 495 ||| || || | | ||||||||||||| || || ||| |||| || ||||| |||||| Sbjct: 9528 catttattggccaaggagccagagaaactcgctgggcctttgcttgcggatacctatgta 9587 Query: 496 actctcctaaaaggtcgcaatgcatggtatgggcaaatgctagcgaagggagaactcagg 555 || | || |||||||| ||||| ||||| || || | || || || |||||||| || Sbjct: 9588 acattactgaaaggtcgtaatgcgtggtacggccagaaacttgcaaaaggagaacttagc 9647 Query: 556 ctcgatatgggtgacagtatcaaagg 581 || || ||||||||||| |||||||| Sbjct: 9648 cttgaaatgggtgacagcatcaaagg 9673
>gb|AY224556.1| Oryza sativa (japonica cultivar-group) isolate 26646 glycerol-3-phosphate dehydrogenase-like protein mRNA, partial cds Length = 738 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 154 tatcttggaggcccaaacattgcctcagaaattta 188 |||||||||||||| |||||||| ||||||||||| Sbjct: 694 tatcttggaggccctaacattgcttcagaaattta 728
>gb|DQ013289.1| Zorotypus sp. MY1 18S ribosomal RNA gene, partial sequence Length = 1907 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 331 gtatatgctattggtgctggaat 353 ||||||||||||||||||||||| Sbjct: 606 gtatatgctattggtgctggaat 584
>dbj|AK047324.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930049H17 product:unclassifiable, full insert sequence Length = 3751 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 149 tactctatcttggaggcccaaa 170 |||||||||||||||||||||| Sbjct: 3443 tactctatcttggaggcccaaa 3464
>emb|AL805970.8| Mouse DNA sequence from clone RP23-438O3 on chromosome 4, complete sequence Length = 180421 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 149 tactctatcttggaggcccaaa 170 |||||||||||||||||||||| Sbjct: 37601 tactctatcttggaggcccaaa 37622
>gb|AC109225.13| Mus musculus chromosome 19, clone RP23-395B21, complete sequence Length = 257062 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 291 tgacattgttactcatgaggt 311 ||||||||||||||||||||| Sbjct: 153376 tgacattgttactcatgaggt 153396
>gb|AC154738.2| Mus musculus BAC clone RP24-390D14 from chromosome 14, complete sequence Length = 197100 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 446 cagaacagccagagaaacttg 466 ||||||||||||||||||||| Sbjct: 175045 cagaacagccagagaaacttg 175065
>gb|AC167563.3| Mus musculus BAC clone RP24-392I11 from chromosome 16, complete sequence Length = 201682 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 181 gaaatttataacaaggaatat 201 ||||||||||||||||||||| Sbjct: 47718 gaaatttataacaaggaatat 47698
>gb|AC164099.3| Mus musculus BAC clone RP23-10H9 from chromosome 14, complete sequence Length = 221612 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 446 cagaacagccagagaaacttg 466 ||||||||||||||||||||| Sbjct: 203263 cagaacagccagagaaacttg 203243
>gb|AC161376.2| Mus musculus BAC clone RP23-264M10 from chromosome 16, complete sequence Length = 199086 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 481 gctgatacttatgtaactct 500 |||||||||||||||||||| Sbjct: 67426 gctgatacttatgtaactct 67445
>gb|AC125377.5| Mus musculus BAC clone RP23-27C10 from chromosome 1, complete sequence Length = 227511 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 ctcttgctaagtttcttaga 261 |||||||||||||||||||| Sbjct: 136438 ctcttgctaagtttcttaga 136457
>gb|AC115940.11| Mus musculus chromosome 5, clone RP24-553D12, complete sequence Length = 189685 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 gcaaaggggatagaagcctc 74 |||||||||||||||||||| Sbjct: 1892 gcaaaggggatagaagcctc 1911
>gb|AC164086.3| Mus musculus BAC clone RP23-25E6 from chromosome 13, complete sequence Length = 214085 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 tgcagctggcgttccaactg 142 |||||||||||||||||||| Sbjct: 126074 tgcagctggcgttccaactg 126093
>gb|AC002519.1|HUAC002519 Human Chromosome 16 BAC clone CIT987SK-A-355G7, complete sequence Length = 139958 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaagaatgtatatgctattg 343 |||||||||||||||||||| Sbjct: 56611 gaagaatgtatatgctattg 56630
>gb|AC127275.4| Mus musculus BAC clone RP24-207I8 from chromosome 5, complete sequence Length = 180919 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 gcaaaggggatagaagcctc 74 |||||||||||||||||||| Sbjct: 76826 gcaaaggggatagaagcctc 76845
>emb|AL391838.9| Human DNA sequence from clone RP11-307O11 on chromosome 13, complete sequence Length = 146127 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaagaatgtatatgctattg 343 |||||||||||||||||||| Sbjct: 118469 gaagaatgtatatgctattg 118450
>emb|AL355539.18| Human DNA sequence from clone RP5-1077K16 on chromosome 1 Contains the gene for protein arginine N-methyltransferase 6 (PRMT6) and a CpG island, complete sequence Length = 92293 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaagaatgtatatgctattg 343 |||||||||||||||||||| Sbjct: 48946 gaagaatgtatatgctattg 48927
>gb|AC163343.2| Mus musculus BAC clone RP23-472D11 from chromosome 13, complete sequence Length = 164331 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 tgcagctggcgttccaactg 142 |||||||||||||||||||| Sbjct: 132402 tgcagctggcgttccaactg 132383
>gb|AC079801.2| Homo sapiens BAC clone RP11-717F1 from 16, complete sequence Length = 177312 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 277 gtttgggataacagtgacattgtt 300 |||||||| ||||||||||||||| Sbjct: 3152 gtttgggagaacagtgacattgtt 3175
>gb|AF349466.1|AF349466 Homo sapiens neutrophil-activating peptide ENA-78, platelet basic protein, and platelet factor 4 genes, complete cds Length = 53374 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 atattcattacccatctact 443 |||||||||||||||||||| Sbjct: 35916 atattcattacccatctact 35935
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 aacctcttgctaagtttctt 258 |||||||||||||||||||| Sbjct: 13845246 aacctcttgctaagtttctt 13845265
>gb|AC097709.3| Homo sapiens BAC clone RP11-19B4 from 4, complete sequence Length = 160741 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 424 atattcattacccatctact 443 |||||||||||||||||||| Sbjct: 63913 atattcattacccatctact 63894
>gb|CP000084.1| Candidatus Pelagibacter ubique HTCC1062, complete genome Length = 1308759 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 aagaatgtatatgctattgg 344 |||||||||||||||||||| Sbjct: 234726 aagaatgtatatgctattgg 234707
>dbj|AP002970.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0504D03 Length = 139201 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 aacctcttgctaagtttctt 258 |||||||||||||||||||| Sbjct: 107257 aacctcttgctaagtttctt 107276
>dbj|AP005577.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1655_B12 Length = 132736 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 aacctcttgctaagtttctt 258 |||||||||||||||||||| Sbjct: 94730 aacctcttgctaagtttctt 94749 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,739,147 Number of Sequences: 3902068 Number of extensions: 4739147 Number of successful extensions: 88591 Number of sequences better than 10.0: 48 Number of HSP's better than 10.0 without gapping: 50 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 88378 Number of HSP's gapped (non-prelim): 187 length of query: 581 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 558 effective length of database: 17,143,297,704 effective search space: 9565960118832 effective search space used: 9565960118832 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
