ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd18h01 |
|---|---|
| Clone Library Name | barley_pub |
>RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes assembly protein| RCA1 (EC 3.4.24.-) (TAT-binding homolog 12) Length = 825 Score = 295 bits (756), Expect = 6e-80 Identities = 150/214 (70%), Positives = 175/214 (81%) Frame = +3 Query: 3 ALLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSI 182 A+L GPPGTGKTLLAKATAGE+GVPF +SGS+F+EMFVGVG +RVR+LF+ AR+ APSI Sbjct: 384 AILSGPPGTGKTLLAKATAGEAGVPFYFVSGSEFVEMFVGVGAARVRDLFKTARENAPSI 443 Query: 183 VFIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKA 362 VFIDEIDAI FSG+NDERE+TLNQ+LVEMDGF VVVLAGTNRPDILDKA Sbjct: 444 VFIDEIDAIGKARQKGNFSGANDERENTLNQMLVEMDGFTPADHVVVLAGTNRPDILDKA 503 Query: 363 LLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANV 542 LLRPGRFDR I IDKP+++GR IF ++L LKL E RLAALTPGF+GADIANV Sbjct: 504 LLRPGRFDRHINIDKPELEGRKAIFAVHLHHLKLAGEIFDLKNRLAALTPGFSGADIANV 563 Query: 543 CNEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 CNEAALIAAR+DE + + HFE AI+R+IGG+E+ Sbjct: 564 CNEAALIAARSDEDAVKLNHFEQAIERVIGGVER 597
>AFG3_YEAST (P39925) Mitochondrial respiratory chain complexes assembly protein| AFG3 (EC 3.4.24.-) (TAT-binding homolog 10) Length = 761 Score = 282 bits (721), Expect = 7e-76 Identities = 145/219 (66%), Positives = 172/219 (78%), Gaps = 5/219 (2%) Frame = +3 Query: 3 ALLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSI 182 A+L GPPGTGKTLLAKATAGE+ VPF+S+SGS+F+EMFVGVG SRVR+LF +AR APSI Sbjct: 324 AILSGPPGTGKTLLAKATAGEANVPFLSVSGSEFVEMFVGVGASRVRDLFTQARSMAPSI 383 Query: 183 VFIDEIDAIXXXXXXX-XFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDK 359 +FIDEIDAI G+NDERE+TLNQLLVEMDGF T+ VVVLAGTNRPD+LD Sbjct: 384 IFIDEIDAIGKERGKGGALGGANDEREATLNQLLVEMDGFTTSDQVVVLAGTNRPDVLDN 443 Query: 360 ALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLD----NEPTYFSQRLAALTPGFAGA 527 AL+RPGRFDR I ID PD+ GR QI+ ++L +L LD ++ S +LA LTPGF GA Sbjct: 444 ALMRPGRFDRHIQIDSPDVNGRQQIYLVHLKRLNLDPLLTDDMNNLSGKLATLTPGFTGA 503 Query: 528 DIANVCNEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 DIAN CNEAALIAAR ++ IT+ HFE AI+R+I GLEK Sbjct: 504 DIANACNEAALIAARHNDPYITIHHFEQAIERVIAGLEK 542
>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like| protein) Length = 797 Score = 281 bits (720), Expect = 9e-76 Identities = 145/216 (67%), Positives = 174/216 (80%), Gaps = 2/216 (0%) Frame = +3 Query: 3 ALLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSI 182 A+L GPPGTGKTLLAKATAGE+ VPF+++SGS+F+EMFVGVGP+RVR+LF AR+ AP I Sbjct: 344 AILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCI 403 Query: 183 VFIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKA 362 +FIDEIDA+ F G + E+E+TLNQLLVEMDGF TT VV+LAGTNRPDILD A Sbjct: 404 LFIDEIDAVGRKRGRGNFGGQS-EQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPA 462 Query: 363 LLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDN--EPTYFSQRLAALTPGFAGADIA 536 LLRPGRFDRQI I PDIKGR IF+++L LKLD+ E +++LA+LTPGF+GAD+A Sbjct: 463 LLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKDKLARKLASLTPGFSGADVA 522 Query: 537 NVCNEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 NVCNEAALIAAR I +HFE AI+R+IGGLEK Sbjct: 523 NVCNEAALIAARHLSDSINQKHFEQAIERVIGGLEK 558
>AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)| Length = 802 Score = 280 bits (717), Expect = 2e-75 Identities = 145/216 (67%), Positives = 174/216 (80%), Gaps = 2/216 (0%) Frame = +3 Query: 3 ALLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSI 182 A+L GPPGTGKTLLAKATAGE+ VPF+++SGS+F+EMFVGVGP+RVR+LF AR+ AP I Sbjct: 343 AILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCI 402 Query: 183 VFIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKA 362 +FIDEIDA+ F G + E+E+TLNQLLVEMDGF TT VV+LAGTNRPDILD A Sbjct: 403 LFIDEIDAVGRKRGRGNFGGQS-EQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPA 461 Query: 363 LLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDN--EPTYFSQRLAALTPGFAGADIA 536 LLRPGRFDRQI I PDIKGR IF+++L LKLD+ E +++LA+LTPGF+GAD+A Sbjct: 462 LLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSALEKDKLARKLASLTPGFSGADVA 521 Query: 537 NVCNEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 NVCNEAALIAAR I +HFE AI+R+IGGLEK Sbjct: 522 NVCNEAALIAARHLSDAINEKHFEQAIERVIGGLEK 557
>AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)| Length = 663 Score = 271 bits (692), Expect = 2e-72 Identities = 140/216 (64%), Positives = 169/216 (78%), Gaps = 2/216 (0%) Frame = +3 Query: 3 ALLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSI 182 A+L GPPGTGKTLLAKATAGE+ VPF++++GS+F+EMFVGVGP+RVR++F AR+ AP I Sbjct: 210 AMLTGPPGTGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDMFAMARKHAPCI 269 Query: 183 VFIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKA 362 +FIDEIDAI G + E+E+TLNQ+LVEMDGF ++ VVVLAGTNRPDILD A Sbjct: 270 LFIDEIDAIGRKRGRGHLGGQS-EQENTLNQMLVEMDGFNSSTNVVVLAGTNRPDILDPA 328 Query: 363 LLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDN--EPTYFSQRLAALTPGFAGADIA 536 L RPGRFDRQI I PDIKGR IF+++L LKLD S++LAALTPGF GADI+ Sbjct: 329 LTRPGRFDRQIYIGPPDIKGRSSIFKVHLRPLKLDGSLSKDALSRKLAALTPGFTGADIS 388 Query: 537 NVCNEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 NVCNEAALIAAR + +HFE AI+R+IGGLEK Sbjct: 389 NVCNEAALIAARHLSPSVQERHFEQAIERVIGGLEK 424
>FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.4.24.-)| Length = 628 Score = 258 bits (658), Expect = 1e-68 Identities = 131/214 (61%), Positives = 160/214 (74%), Gaps = 1/214 (0%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LLVGPPGTGKTLLAKA AGE+GVPF ISGS+F+E+FVG G +RVR+LF++A++ AP IV Sbjct: 211 LLVGPPGTGKTLLAKAAAGEAGVPFFIISGSEFVELFVGAGAARVRDLFEQAKKQAPCIV 270 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTT-AGVVVLAGTNRPDILDKA 362 FIDE+DAI F G NDERE TLNQLL EMDGF A V+VLA TNRP+ LD A Sbjct: 271 FIDELDAIGKSRASGAFMGGNDEREQTLNQLLTEMDGFSAAGATVIVLAATNRPETLDPA 330 Query: 363 LLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANV 542 LLRPGRFDRQ+ +D+PD+ GR +I IY K+KLD E + +A TPGFAGAD+AN+ Sbjct: 331 LLRPGRFDRQVLVDRPDLAGRLKILEIYAKKIKLDKEVEL--KNIATRTPGFAGADLANL 388 Query: 543 CNEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 NEAAL+AAR + +T F AI+R++ GLEK Sbjct: 389 VNEAALLAARNKQDSVTEADFREAIERVVAGLEK 422
>FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 679 Score = 254 bits (648), Expect = 2e-67 Identities = 126/213 (59%), Positives = 162/213 (76%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LLVGPPGTGKTLLA+A AGE+GVPF SISGSDF+EMFVGVG SRVR+LF+ A++ AP I+ Sbjct: 203 LLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCII 262 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDA+ G +DERE TLNQLLVEMDGF G++++A TNR DILD AL Sbjct: 263 FIDEIDAV-GRQRGAGLGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRADILDPAL 321 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGRFDRQI +++PD+ GR+++ +++ L+++ + +A TPGF+GAD+ N+ Sbjct: 322 LRPGRFDRQIQVNRPDVNGREEVLKVHARNKPLNDDVNL--KTIATRTPGFSGADLENLL 379 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 NEAAL+AAR D T+I+M H E AIDR+I G K Sbjct: 380 NEAALVAARHDHTKISMIHIEEAIDRVIAGPAK 412
>FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 638 Score = 252 bits (644), Expect = 6e-67 Identities = 129/214 (60%), Positives = 160/214 (74%), Gaps = 1/214 (0%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LLVGPPGTGKTLLAKA AGE+ VPF S+ GS F+EMFVG+G SRVR+LF A++ APSI+ Sbjct: 213 LLVGPPGTGKTLLAKAVAGEASVPFFSMGGSSFIEMFVGLGASRVRDLFDIAKKEAPSII 272 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGT-TAGVVVLAGTNRPDILDKA 362 FIDEIDAI NDERE TLNQLL EMDGFG+ A V+VLA TNRP+ILD A Sbjct: 273 FIDEIDAIGKSRAAGGMISGNDEREQTLNQLLAEMDGFGSENAPVIVLAATNRPEILDPA 332 Query: 363 LLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANV 542 LLRPGRFDRQ+ +DKPD KGR +I ++++ +KL N+ Q +A LT G AGAD+AN+ Sbjct: 333 LLRPGRFDRQVLVDKPDFKGRVEILKVHIKPVKLANDVDL--QEIAKLTAGLAGADLANI 390 Query: 543 CNEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 NEAAL+A R ++ ++ QH + A++R I GLEK Sbjct: 391 INEAALLAGRNNQKEVKQQHLKEAVERGIAGLEK 424
>FTSH_HELPJ (Q9ZM66) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 632 Score = 250 bits (639), Expect = 2e-66 Identities = 127/214 (59%), Positives = 160/214 (74%), Gaps = 1/214 (0%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LLVGPPGTGKTLLAKA AGE+ VPF S+ GS F+EMFVG+G SRVR+LF+ A++ APSI+ Sbjct: 207 LLVGPPGTGKTLLAKAVAGEAHVPFFSMGGSSFIEMFVGLGASRVRDLFETAKKQAPSII 266 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGT-TAGVVVLAGTNRPDILDKA 362 FIDEIDAI NDERE TLNQLL EMDGFG+ A V+VLA TNRP+ILD A Sbjct: 267 FIDEIDAIGKSRAAGGMISGNDEREQTLNQLLAEMDGFGSENAPVIVLAATNRPEILDPA 326 Query: 363 LLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANV 542 L+RPGRFDRQ+ +DKPD GR +I ++++ +KL N+ Q +A LT G AGAD+AN+ Sbjct: 327 LMRPGRFDRQVLVDKPDFNGRVEILKVHIKGVKLANDVNL--QEVAKLTAGLAGADLANI 384 Query: 543 CNEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 NEAAL+A R ++ ++ QH + A++R I GLEK Sbjct: 385 INEAALLAGRNNQKEVKQQHLKEAVERGIAGLEK 418
>FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3.4.24.-)| Length = 665 Score = 250 bits (639), Expect = 2e-66 Identities = 127/212 (59%), Positives = 158/212 (74%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL+GPPGTGKTLLAKA AGE+GVPF SISGS+F+EMFVGVG SRVR+LF++A++ AP +V Sbjct: 248 LLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLV 307 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDA+ + G NDERE TLNQLL EMDGF +G++V+A TNRPD+LD AL Sbjct: 308 FIDEIDAV-GRQRGVGYGGGNDEREQTLNQLLTEMDGFEGNSGIIVIAATNRPDVLDLAL 366 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGRFDRQ+T+D PD++GR+ I I+ KL E + +A TPGF GAD+ANV Sbjct: 367 LRPGRFDRQVTVDYPDVQGRELILAIHAQNKKLHEEVQLAA--IARRTPGFTGADLANVL 424 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGGLE 641 NEAA+ AR + ITM AIDR++ G+E Sbjct: 425 NEAAIFTARRRKEAITMAEVNDAIDRVVAGME 456
>FTSH_HELPY (P71408) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 632 Score = 250 bits (638), Expect = 3e-66 Identities = 127/214 (59%), Positives = 160/214 (74%), Gaps = 1/214 (0%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LLVGPPGTGKTLLAKA AGE+ VPF S+ GS F+EMFVG+G SRVR+LF+ A++ APSI+ Sbjct: 207 LLVGPPGTGKTLLAKAVAGEAHVPFFSMGGSSFIEMFVGLGASRVRDLFETAKKQAPSII 266 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGT-TAGVVVLAGTNRPDILDKA 362 FIDEIDAI NDERE TLNQLL EMDGFG+ A V+VLA TNRP+ILD A Sbjct: 267 FIDEIDAIGKSRAAGGVVSGNDEREQTLNQLLAEMDGFGSENAPVIVLAATNRPEILDPA 326 Query: 363 LLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANV 542 L+RPGRFDRQ+ +DKPD GR +I ++++ +KL N+ Q +A LT G AGAD+AN+ Sbjct: 327 LMRPGRFDRQVLVDKPDFNGRVEILKVHIKGVKLANDVNL--QEVAKLTAGLAGADLANI 384 Query: 543 CNEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 NEAAL+A R ++ ++ QH + A++R I GLEK Sbjct: 385 INEAALLAGRNNQKEVRQQHLKEAVERGIAGLEK 418
>FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 249 bits (637), Expect = 4e-66 Identities = 124/213 (58%), Positives = 163/213 (76%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL+GPPGTGKTLLAKA AGE+ VPF SISGSDF+EMFVGVG SRVR++F++ ++ AP I+ Sbjct: 192 LLIGPPGTGKTLLAKAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKRNAPCII 251 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDA+ G NDERE TLNQ+LVEMDGF GVV++A TNRPD+LD+AL Sbjct: 252 FIDEIDAVGRHRGIG-MGGGNDEREQTLNQMLVEMDGFEANEGVVIIAATNRPDVLDRAL 310 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGRFDRQI + PDI GR+QI +++L K+K ++ T ++ +A TPGF+GA++AN+ Sbjct: 311 LRPGRFDRQIAVANPDINGREQILKVHLKKIKYNS--TVLARIIARGTPGFSGAELANLV 368 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 NEAALIAAR + ++ M E A D+++ G+ + Sbjct: 369 NEAALIAARLGKKEVDMHDMEEAKDKVLMGVAR 401
>FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 249 bits (636), Expect = 5e-66 Identities = 124/211 (58%), Positives = 162/211 (76%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL+GPPGTGKTLLAKA AGE+ VPF SISGSDF+EMFVGVG SRVR++F++ ++ AP I+ Sbjct: 192 LLIGPPGTGKTLLAKAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKRNAPCII 251 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDA+ G NDERE TLNQ+LVEMDGF GVV++A TNRPD+LD+AL Sbjct: 252 FIDEIDAVGRHRGIG-MGGGNDEREQTLNQMLVEMDGFEANEGVVIIAATNRPDVLDRAL 310 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGRFDRQI + PDI GR+QI +++L K+K ++ T ++ +A TPGF+GA++AN+ Sbjct: 311 LRPGRFDRQIAVANPDINGREQILKVHLKKIKYNS--TVLARIIARGTPGFSGAELANLV 368 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGGL 638 NEAALIAAR + ++ M E A D+++ G+ Sbjct: 369 NEAALIAARLGKKEVDMHDMEEAKDKVLMGV 399
>FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 631 Score = 249 bits (635), Expect = 6e-66 Identities = 125/212 (58%), Positives = 161/212 (75%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LLVGPPGTGKTLLAKA AGE+GVPF SISGS+F+EMFVGVG SRVR+LF++A++ +P IV Sbjct: 210 LLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENSPCIV 269 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDA+ G NDERE TLNQLL EMDGF G++++A TNR D+LD AL Sbjct: 270 FIDEIDAV-GRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRVDVLDAAL 328 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGRFDRQ+T+D PD+KGR +I ++ KLD + + +A TPGF+GAD+AN+ Sbjct: 329 LRPGRFDRQVTVDVPDVKGRLEILNVHARNKKLDLSISL--ELIAKRTPGFSGADLANLL 386 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGGLE 641 NEAA++ AR + QIT+ +++IDR+I G+E Sbjct: 387 NEAAILTARRRKKQITISEIDASIDRVIAGME 418
>FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 634 Score = 247 bits (631), Expect = 2e-65 Identities = 126/213 (59%), Positives = 159/213 (74%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL G PG GKTLLAKA AGE+ VPF+S+SGSDF+EMFVGVG +RVR+LF+ A++ AP I+ Sbjct: 192 LLYGEPGVGKTLLAKAIAGEAHVPFISVSGSDFVEMFVGVGAARVRDLFETAKKHAPCII 251 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDA+ G +DERE TLNQLLVEMDGF T+ G++V+A TNRPDILD AL Sbjct: 252 FIDEIDAVGRARGAIPVGGGHDEREQTLNQLLVEMDGFDTSDGIIVIAATNRPDILDPAL 311 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGRFDRQI I KPD++GR +I +++ KL + + +A TPGF GAD+ N+ Sbjct: 312 LRPGRFDRQIFIPKPDVRGRYEILKVHARNKKLAKDVDL--EFVARATPGFTGADLENLL 369 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 NEAAL+AAR + +ITM+ E A+DRI GLE+ Sbjct: 370 NEAALLAARKGKEEITMEEIEEALDRITMGLER 402
>FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 609 Score = 246 bits (628), Expect = 4e-65 Identities = 124/213 (58%), Positives = 160/213 (75%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LLVGPPGTGKTLLA+A AGE+ VPF ISGSDF+EMFVG+G SRVR+LF++AR+ AP I+ Sbjct: 178 LLVGPPGTGKTLLARAVAGEASVPFFRISGSDFIEMFVGIGASRVRDLFKQAREKAPGII 237 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDE+DAI S NDERE TLNQLLVEMDGF T G+++LA TNRPD+LD AL Sbjct: 238 FIDELDAIGKSRLNAIHS--NDEREQTLNQLLVEMDGFDNTTGLILLAATNRPDVLDPAL 295 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGRFDRQ+ +D+PD+KGR+ I RI+ +KL P + +A +T G++GAD+ANV Sbjct: 296 LRPGRFDRQVCVDRPDLKGREAILRIHAQNVKL--APEVDLKAVARITGGYSGADLANVV 353 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 NEAAL+A R+ Q+ + A+++ + GL+K Sbjct: 354 NEAALLAVRSGRAQVIETDLDEAVEKTMIGLQK 386
>FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 627 Score = 246 bits (627), Expect = 5e-65 Identities = 121/212 (57%), Positives = 158/212 (74%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LLVGPPGTGKTLLAKA AGE+GVPF SISGS+F+EMFVGVG SRVR+LF++A++ AP ++ Sbjct: 209 LLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLI 268 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDA+ G NDERE TLNQLL EMDGF G++++A TNRPD+LD AL Sbjct: 269 FIDEIDAV-GRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDSAL 327 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 +RPGRFDRQ+ +D PD GR +I ++ KL E + S +A TPGF+GAD+AN+ Sbjct: 328 MRPGRFDRQVMVDAPDYSGRKEILEVHARNKKLAPEVSIDS--IARRTPGFSGADLANLL 385 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGGLE 641 NEAA++ AR ++ IT+ + A+DR++ G+E Sbjct: 386 NEAAILTARRRKSAITLLEIDDAVDRVVAGME 417
>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)| Length = 616 Score = 246 bits (627), Expect = 5e-65 Identities = 123/213 (57%), Positives = 156/213 (73%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LLVGPPGTGKTLLAKA AGE+GVPF SISGS+F+EMFVGVG SRVR+LF++A+ AP IV Sbjct: 198 LLVGPPGTGKTLLAKAVAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFEQAKANAPCIV 257 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDA+ G NDERE TLNQLL EMDGF G++++A TNRPD+LD AL Sbjct: 258 FIDEIDAV-GRQRGAGLGGGNDEREQTLNQLLTEMDGFEGNTGIIIVAATNRPDVLDSAL 316 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 +RPGRFDRQ+ +D+PD GR +I ++ L + ++A TPGF GAD++N+ Sbjct: 317 MRPGRFDRQVVVDRPDYAGRREILNVHARGKTLSQDVDL--DKIARRTPGFTGADLSNLL 374 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 NEAA++AAR + T+I+M AIDR++ G EK Sbjct: 375 NEAAILAARRNLTEISMDEVNDAIDRVLAGPEK 407
>FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 245 bits (626), Expect = 7e-65 Identities = 124/213 (58%), Positives = 158/213 (74%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LLVGPPGTGKTLLAKA AGE+GVPF SISGSDF+EMFVGVG SRVR+LF+ A++ AP ++ Sbjct: 198 LLVGPPGTGKTLLAKACAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCLI 257 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDA+ G +DERE TLNQLLVEMDGF G++++A TNR DILD AL Sbjct: 258 FIDEIDAV-GRQRGAGLGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRADILDPAL 316 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGRFDRQIT+D+PD+ GR+ + +++ LD T + +A TPGF+GAD+ N+ Sbjct: 317 LRPGRFDRQITVDRPDVIGREAVLKVHARNKPLDE--TVNLKSIAMRTPGFSGADLENLL 374 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 NEAAL+AAR ++ +I + + A DR+I G K Sbjct: 375 NEAALVAARQNKKKIDARDIDEATDRVIAGPAK 407
>FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 628 Score = 245 bits (626), Expect = 7e-65 Identities = 124/212 (58%), Positives = 160/212 (75%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LLVGPPGTGKTLLAKA AGE+GVPF SISGS+F+EMFVGVG SRVR+LF++A+ AP IV Sbjct: 210 LLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKDNAPCIV 269 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDA+ G NDERE TLNQLL EMDGF GV+V+A TNR DILD AL Sbjct: 270 FIDEIDAV-GRQRGTGVGGGNDEREQTLNQLLTEMDGFEGNTGVIVIAATNRADILDSAL 328 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGRFDRQ+++D PD +GR I ++ K++++ + + +A TPGF+GAD+AN+ Sbjct: 329 LRPGRFDRQVSVDVPDFRGRLAILEVHAKNKKMESKVSL--ETIARRTPGFSGADLANLL 386 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGGLE 641 NEAA++ AR ++ +TM +++IDR++ GLE Sbjct: 387 NEAAILTARRRKSAMTMSEIDTSIDRVVAGLE 418
>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 243 bits (621), Expect = 3e-64 Identities = 121/213 (56%), Positives = 162/213 (76%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L+VGPPGTGKTLLAKA AGE+ VPF +ISGSDF+EMFVGVG SRVR++F++A++ AP I+ Sbjct: 189 LMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCII 248 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDA+ G +DERE TLNQ+LVEMDGF G++V+A TNRPD+LD AL Sbjct: 249 FIDEIDAV-GRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPAL 307 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGRFDRQ+ + PD++GR+QI ++++ ++ L P + +A TPGF+GAD+AN+ Sbjct: 308 LRPGRFDRQVVVGLPDVRGREQILKVHMRRVPL--APDIDAAIIARGTPGFSGADLANLV 365 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 NEAAL AAR ++ ++M FE A D+I+ G E+ Sbjct: 366 NEAALFAARGNKRVVSMVEFEKAKDKIMMGAER 398
>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 243 bits (621), Expect = 3e-64 Identities = 121/213 (56%), Positives = 162/213 (76%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L+VGPPGTGKTLLAKA AGE+ VPF +ISGSDF+EMFVGVG SRVR++F++A++ AP I+ Sbjct: 189 LMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCII 248 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDA+ G +DERE TLNQ+LVEMDGF G++V+A TNRPD+LD AL Sbjct: 249 FIDEIDAV-GRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPAL 307 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGRFDRQ+ + PD++GR+QI ++++ ++ L P + +A TPGF+GAD+AN+ Sbjct: 308 LRPGRFDRQVVVGLPDVRGREQILKVHMRRVPL--APDIDAAIIARGTPGFSGADLANLV 365 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 NEAAL AAR ++ ++M FE A D+I+ G E+ Sbjct: 366 NEAALFAARGNKRVVSMVEFEKAKDKIMMGAER 398
>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 243 bits (621), Expect = 3e-64 Identities = 121/213 (56%), Positives = 162/213 (76%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L+VGPPGTGKTLLAKA AGE+ VPF +ISGSDF+EMFVGVG SRVR++F++A++ AP I+ Sbjct: 189 LMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCII 248 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDA+ G +DERE TLNQ+LVEMDGF G++V+A TNRPD+LD AL Sbjct: 249 FIDEIDAV-GRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPAL 307 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGRFDRQ+ + PD++GR+QI ++++ ++ L P + +A TPGF+GAD+AN+ Sbjct: 308 LRPGRFDRQVVVGLPDVRGREQILKVHMRRVPL--APDIDAAIIARGTPGFSGADLANLV 365 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 NEAAL AAR ++ ++M FE A D+I+ G E+ Sbjct: 366 NEAALFAARGNKRVVSMVEFEKAKDKIMMGAER 398
>FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)| Length = 613 Score = 243 bits (620), Expect = 4e-64 Identities = 123/213 (57%), Positives = 159/213 (74%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L+VGPPGTGKTLLAKA AGE+ VPF +ISGSDF+EMFVGVG SRVR++F+ AR+ AP I+ Sbjct: 189 LMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHARKSAPCII 248 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDA+ G +DERE TLNQ+LVEMDGF GV+++A TNRPD+LD AL Sbjct: 249 FIDEIDAV-GRQRGAGLGGGHDEREQTLNQMLVEMDGFDGNEGVILIAATNRPDVLDPAL 307 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGRFDRQ+ + PD++GR QI ++++ K+ L + +A TPGF+GAD+AN+ Sbjct: 308 LRPGRFDRQVIVALPDVRGRKQILKVHMRKVPLSEDVD--PMIIARGTPGFSGADLANLV 365 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 NEAAL AAR + ++M HFE A D+I+ G E+ Sbjct: 366 NEAALFAARFNNRVVSMIHFEKAKDKIMMGSER 398
>FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chloroplast| precursor (EC 3.4.24.-) Length = 704 Score = 242 bits (618), Expect = 6e-64 Identities = 121/213 (56%), Positives = 157/213 (73%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LLVGPPGTGKTLLA+A AGE+GVPF S + S+F+E+FVGVG SRVR+LF++A+ AP IV Sbjct: 287 LLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIV 346 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDA+ G NDERE T+NQLL EMDGF +GV+VLA TNRPD+LD AL Sbjct: 347 FIDEIDAVGRQRGAG-MGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSAL 405 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGRFDRQ+T+D+PD+ GR QI +++ + + Y +++A TPGF GAD+ N+ Sbjct: 406 LRPGRFDRQVTVDRPDVAGRVQILKVHSRGKAIGKDVDY--EKVARRTPGFTGADLQNLM 463 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 NEAA++AAR + +I+ A++RII G EK Sbjct: 464 NEAAILAARRELKEISKDEISDALERIIAGPEK 496
>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 241 bits (616), Expect = 1e-63 Identities = 120/213 (56%), Positives = 162/213 (76%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L+VGPPGTGKTLLAKA AGE+ VPF +ISGSDF+EMFVGVG SRVR++F++A++ AP I+ Sbjct: 189 LMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCII 248 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDA+ G +DERE TLNQ+LVEMDGF G++V+A TNRPD+LD AL Sbjct: 249 FIDEIDAV-GRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPAL 307 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGRFDRQ+ + PD++GR+QI ++++ ++ L + + +A TPGF+GAD+AN+ Sbjct: 308 LRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLATD--IDAAIIARGTPGFSGADLANLV 365 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 NEAAL AAR ++ ++M FE A D+I+ G E+ Sbjct: 366 NEAALFAARGNKRVVSMVEFEKAKDKIMMGAER 398
>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 241 bits (616), Expect = 1e-63 Identities = 120/213 (56%), Positives = 162/213 (76%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L+VGPPGTGKTLLAKA AGE+ VPF +ISGSDF+EMFVGVG SRVR++F++A++ AP I+ Sbjct: 189 LMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCII 248 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDA+ G +DERE TLNQ+LVEMDGF G++V+A TNRPD+LD AL Sbjct: 249 FIDEIDAV-GRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPAL 307 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGRFDRQ+ + PD++GR+QI ++++ ++ L + + +A TPGF+GAD+AN+ Sbjct: 308 LRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLATD--IDAAIIARGTPGFSGADLANLV 365 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 NEAAL AAR ++ ++M FE A D+I+ G E+ Sbjct: 366 NEAALFAARGNKRVVSMVEFEKAKDKIMMGAER 398
>FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)| Length = 611 Score = 241 bits (616), Expect = 1e-63 Identities = 121/213 (56%), Positives = 160/213 (75%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L+VGPPGTGKTLLAKA AGE+ VPF +ISGSDF+EMFVGVG SRVR++F+ +R+ AP I+ Sbjct: 189 LMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHSRKSAPCII 248 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDA+ G +DERE TLNQ+LVEMDGF G++++A TNRPD+LD AL Sbjct: 249 FIDEIDAV-GRQRGAGLGGGHDEREQTLNQMLVEMDGFDGNEGIILIAATNRPDVLDPAL 307 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGRFDRQ+ + PDI+GR+QI ++++ K+ L + +A TPGF+GAD+AN+ Sbjct: 308 LRPGRFDRQVIVALPDIRGREQILKVHMRKVPLSKDVD--PMIIARGTPGFSGADLANLV 365 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 NEAAL AAR D+ ++M FE A D+++ G E+ Sbjct: 366 NEAALFAARLDKRVVSMLEFERAKDKMMMGSER 398
>FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.24.-) (FtsHCP)| Length = 603 Score = 241 bits (615), Expect = 1e-63 Identities = 126/212 (59%), Positives = 154/212 (72%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LLVGPPGTGKTLLAKA AGE+ VPF SISGS+F+EMFVGVG SRVR+LF++A+Q AP +V Sbjct: 191 LLVGPPGTGKTLLAKAIAGEASVPFFSISGSEFVEMFVGVGASRVRDLFKKAKQNAPCLV 250 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDA+ G NDERE TLNQLL EMDGF GV+V+A TNR D+LD AL Sbjct: 251 FIDEIDAV-GRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVIAATNRVDVLDAAL 309 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGRFDRQI + PD+K R I +++ + KL P + +A T GFAGAD+AN+ Sbjct: 310 LRPGRFDRQIMVSMPDVKSRIAILKVHANQKKL--HPQVSLEAVARRTAGFAGADLANLL 367 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGGLE 641 NEAA++A R QIT + + AIDR+I G+E Sbjct: 368 NEAAILAVRRGLKQITWKEIDDAIDRVIAGME 399
>FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)| Length = 610 Score = 241 bits (614), Expect = 2e-63 Identities = 123/213 (57%), Positives = 158/213 (74%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L+VGPPGTGKTLLAKA AGE+ VPF +ISGSDF+EMFVGVG SRVR++F+ +R+ AP I+ Sbjct: 189 LMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHSRKVAPCII 248 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDA+ G +DERE TLNQ+LVEMDGF G++++A TNRPD+LD AL Sbjct: 249 FIDEIDAV-GRQRGAGLGGGHDEREQTLNQMLVEMDGFDGNEGIILIAATNRPDVLDPAL 307 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGRFDRQI + PDI+GR++I ++++ K+ L N +A TPGF+GAD+AN+ Sbjct: 308 LRPGRFDRQIFVALPDIRGREKIIQVHMKKVPLGNNVD--PMIIARGTPGFSGADLANLV 365 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 NEAAL AAR + + M FESA D+I G E+ Sbjct: 366 NEAALFAARNNRDVVMMSDFESAKDKITMGSER 398
>FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 635 Score = 240 bits (613), Expect = 2e-63 Identities = 120/213 (56%), Positives = 160/213 (75%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L+VGPPGTGKTLLA+A AGE+ VPF +ISGSDF+EMFVGVG SRVR++F++A++ AP ++ Sbjct: 188 LMVGPPGTGKTLLARAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCLI 247 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDA+ G +DERE TLNQ+LVEMDGF GV+V+A TNRPD+LD AL Sbjct: 248 FIDEIDAV-GRQRGAGLGGGHDEREQTLNQMLVEMDGFSGNDGVIVIAATNRPDVLDPAL 306 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 RPGRFDRQ+ + PD+KGR+QI ++++ K+ + + + LA TPG++GAD+AN+ Sbjct: 307 TRPGRFDRQVVVGLPDVKGREQILKVHMRKVSVAQDVD--AMTLARGTPGYSGADLANLV 364 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 NEAAL AAR ++ +TM FE A D+I G E+ Sbjct: 365 NEAALFAARVNKRTVTMLEFEKAKDKINMGPER 397
>SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia protein 7)| Length = 795 Score = 240 bits (612), Expect = 3e-63 Identities = 123/214 (57%), Positives = 155/214 (72%) Frame = +3 Query: 3 ALLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSI 182 ALL+GPPG GKTLLAKA A E+ VPF++++G +F+E+ G+G +RVR+LF+EAR AP I Sbjct: 345 ALLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCI 404 Query: 183 VFIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKA 362 V+IDEIDA+ SN E E TLNQLLVEMDG GTT V+VLA TNR DILD A Sbjct: 405 VYIDEIDAVGKKRSTTMSGFSNTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADILDGA 464 Query: 363 LLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANV 542 L+RPGR DR + ID P ++ R +IF +L LKL T++SQRLA LTPGF+GADIAN+ Sbjct: 465 LMRPGRLDRHVFIDLPTLQERREIFEQHLKSLKLTQSSTFYSQRLAELTPGFSGADIANI 524 Query: 543 CNEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 CNEAAL AAR T + +FE A++R++ G K Sbjct: 525 CNEAALHAAREGHTSVHTLNFEYAVERVLAGTAK 558
>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (DS9) Length = 714 Score = 239 bits (609), Expect = 7e-63 Identities = 119/213 (55%), Positives = 157/213 (73%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LLVGPPGTGKTLLA+A AGE+GVPF S + S+F+E+FVGVG SRVR+LF++A+ AP IV Sbjct: 290 LLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIV 349 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDA+ G NDERE T+NQLL EMDGF +GV+VLA TNRPD+LD AL Sbjct: 350 FIDEIDAVGRQRGAG-MGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSAL 408 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGRFDRQ+T+D+PD+ GR +I +++ L + + +++A TPG+ GAD+ N+ Sbjct: 409 LRPGRFDRQVTVDRPDVAGRIKILQVHSRGKALTKDVDF--EKIARRTPGYTGADLQNLM 466 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 NEAA++AAR + +I+ A++RII G EK Sbjct: 467 NEAAILAARRELKEISKDEISDALERIIAGPEK 499
>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast| precursor (EC 3.4.24.-) Length = 716 Score = 239 bits (609), Expect = 7e-63 Identities = 120/213 (56%), Positives = 156/213 (73%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LLVGPPGTGKTLLA+A AGE+GVPF S + S+F+E+FVGVG SRVR+LF++A+ AP IV Sbjct: 299 LLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIV 358 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDA+ G NDERE T+NQLL EMDGF +GV+VLA TNRPD+LD AL Sbjct: 359 FIDEIDAVGRQRGAG-MGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSAL 417 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGRFDRQ+T+D+PD+ GR +I +++ L + + ++A TPGF GAD+ N+ Sbjct: 418 LRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALGKDVDF--DKVARRTPGFTGADLQNLM 475 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 NEAA++AAR + +I+ A++RII G EK Sbjct: 476 NEAAILAARRELKEISKDEISDALERIIAGPEK 508
>FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (Fragment) Length = 662 Score = 239 bits (609), Expect = 7e-63 Identities = 120/213 (56%), Positives = 155/213 (72%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LLVGPPGTGKTLLA+A AGE+GVPF S + S+F+E+FVGVG SRVR+LF+ A+ AP IV Sbjct: 267 LLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRHLFENAKSKAPCIV 326 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDA+ G NDERE T+NQLL EMDGF +GV+VLA TNRPD+LD AL Sbjct: 327 FIDEIDAVGRQRGAG-LGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSAL 385 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPG+FDRQ+T+D+PD+ GR +I +++ L + + ++A TPGF GAD+ N+ Sbjct: 386 LRPGKFDRQVTVDRPDVAGRVRILQVHSRGKALAKDVDF--DKIARRTPGFTGADLQNLM 443 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 NEAA++AAR D +I+ A++RII G EK Sbjct: 444 NEAAILAARRDLKEISKDEISDALERIIAGPEK 476
>FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 614 Score = 239 bits (609), Expect = 7e-63 Identities = 124/212 (58%), Positives = 155/212 (73%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LLVGPPGTGKTLLAKA AGE+ PF SISGS+F+EMFVGVG SRVR+LF++A++ AP IV Sbjct: 208 LLVGPPGTGKTLLAKAIAGEASAPFFSISGSEFVEMFVGVGASRVRDLFKKAKEKAPCIV 267 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDA+ G NDERE TLNQLL EMDGF GV+V+A TNR D+LD AL Sbjct: 268 FIDEIDAV-GRQRGVGIGGGNDEREQTLNQLLTEMDGFSGDTGVIVVAATNRIDVLDSAL 326 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGRFDRQI + P+I GR I +++ K K+ + + +A TPGF+GAD+AN+ Sbjct: 327 LRPGRFDRQIMVSLPNINGRLAILKVHSKKKKIHKD--VLLEVIARRTPGFSGADLANLL 384 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGGLE 641 NEAA++ R + +ITM+ E +ID+II GLE Sbjct: 385 NEAAILTVRRGKVEITMKEIEDSIDKIIAGLE 416
>FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 238 bits (607), Expect = 1e-62 Identities = 124/210 (59%), Positives = 152/210 (72%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTLLA+A AGE+GVPF +ISGSDF+EMFVGVG SRVR+LF++A+Q +P I+ Sbjct: 200 LLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPCII 259 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F+DEIDA+ G +DERE TLNQLLVEMDGFG AGV+++A TNRPDILD AL Sbjct: 260 FVDEIDAV-GRQRGAGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDILDPAL 318 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGRFDRQI + PD+ GR + R++ + + LA T G GAD+ANV Sbjct: 319 LRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPMAADADL--DGLAKRTVGMTGADLANVI 376 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGG 635 NEAAL+ AR + T IT E A+DR+IGG Sbjct: 377 NEAALLTARENGTVITGPALEEAVDRVIGG 406
>FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 238 bits (607), Expect = 1e-62 Identities = 124/210 (59%), Positives = 152/210 (72%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTLLA+A AGE+GVPF +ISGSDF+EMFVGVG SRVR+LF++A+Q +P I+ Sbjct: 200 LLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPCII 259 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F+DEIDA+ G +DERE TLNQLLVEMDGFG AGV+++A TNRPDILD AL Sbjct: 260 FVDEIDAV-GRQRGAGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDILDPAL 318 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGRFDRQI + PD+ GR + R++ + + LA T G GAD+ANV Sbjct: 319 LRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPMAADADL--DGLAKRTVGMTGADLANVI 376 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGG 635 NEAAL+ AR + T IT E A+DR+IGG Sbjct: 377 NEAALLTARENGTVITGPALEEAVDRVIGG 406
>FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 238 bits (607), Expect = 1e-62 Identities = 121/213 (56%), Positives = 155/213 (72%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTLLAKA AGE+GVPF SISGSDF+EMFVGVG SRVR+LF++A++ AP+I+ Sbjct: 224 LLEGPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRSLFEDAKKAAPAII 283 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDA+ G NDERE TLNQLL+EMDGF G++V+A TNR D+LD AL Sbjct: 284 FIDEIDAV-GRQRGVGLGGGNDEREQTLNQLLIEMDGFEGNEGIIVIAATNRSDVLDPAL 342 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGRFDR++ + +PD+KGR+ I +++ L + + +A TPGF GAD+ NV Sbjct: 343 LRPGRFDRKVLVGRPDVKGREAILKVHAKNKPLAEDVDL--KLVAQQTPGFVGADLENVL 400 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 NEAAL+AAR +++ I + A DR+I G K Sbjct: 401 NEAALVAARRNKSIIDASDIDEAEDRVIAGPSK 433
>FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 238 bits (607), Expect = 1e-62 Identities = 121/213 (56%), Positives = 155/213 (72%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTLLAKA AGE+GVPF SISGSDF+EMFVGVG SRVR+LF++A++ AP+I+ Sbjct: 224 LLEGPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRSLFEDAKKAAPAII 283 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDA+ G NDERE TLNQLL+EMDGF G++V+A TNR D+LD AL Sbjct: 284 FIDEIDAV-GRQRGVGLGGGNDEREQTLNQLLIEMDGFEGNEGIIVIAATNRSDVLDPAL 342 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGRFDR++ + +PD+KGR+ I +++ L + + +A TPGF GAD+ NV Sbjct: 343 LRPGRFDRKVLVGRPDVKGREAILKVHAKNKPLAEDVDL--KLVAQQTPGFVGADLENVL 400 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 NEAAL+AAR +++ I + A DR+I G K Sbjct: 401 NEAALVAARRNKSIIDASDIDEAEDRVIAGPSK 433
>FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) Length = 706 Score = 237 bits (604), Expect = 3e-62 Identities = 119/213 (55%), Positives = 154/213 (72%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LLVGPPGTGKTLLA+A AGE+G PF S + S+F+E+FVGVG SRVR+LF++A+ AP IV Sbjct: 290 LLVGPPGTGKTLLARAVAGEAGTPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIV 349 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDA+ G NDERE T+NQLL EMDGF +GV+VLA TNRPD+LD AL Sbjct: 350 FIDEIDAVGRQRGAG-LGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSAL 408 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGRFDRQ+T+D+PD+ GR +I +++ L + + ++A TPGF G D+ N+ Sbjct: 409 LRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDF--DKIARRTPGFTGVDLQNLM 466 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 NEAA++AAR D +I+ A++RII G EK Sbjct: 467 NEAAILAARRDLKEISKDEIADALERIIAGPEK 499
>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 787 Score = 236 bits (602), Expect = 4e-62 Identities = 123/210 (58%), Positives = 151/210 (71%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTLLA+A AGE+GVPF +ISGSDF+EMFVGVG SRVR+LF +A+Q +P I+ Sbjct: 200 LLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFDQAKQNSPCII 259 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F+DEIDA+ G +DERE TLNQLLVEMDGFG AGV+++A TNRPDILD AL Sbjct: 260 FVDEIDAV-GRQRGTGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDILDPAL 318 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGRFDRQI + PD+ GR + R++ + ++ LA T G GAD+ANV Sbjct: 319 LRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPIADDADL--DGLAKRTVGMTGADLANVV 376 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGG 635 NEAAL+ AR + IT E A+DR+IGG Sbjct: 377 NEAALLTARENGLVITGPALEEAVDRVIGG 406
>FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 695 Score = 229 bits (583), Expect = 7e-60 Identities = 119/214 (55%), Positives = 151/214 (70%), Gaps = 1/214 (0%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTLLAKA AGE+GVPF SISGSDF+EMFVGVG SRVR+LF+ A++ APSI+ Sbjct: 230 LLEGPPGTGKTLLAKAVAGEAGVPFYSISGSDFVEMFVGVGASRVRDLFENAKKTAPSII 289 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTA-GVVVLAGTNRPDILDKA 362 FIDEIDA+ G NDERE TLNQLLVEMDGF V+V+A TNR D+LD A Sbjct: 290 FIDEIDAV-GRQRGAGLGGGNDEREQTLNQLLVEMDGFQDDGNSVIVIAATNRSDVLDPA 348 Query: 363 LLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANV 542 LLRPGRFDR++ + PD+KGR+ + +++ L ++ +A TPG+ GAD+ NV Sbjct: 349 LLRPGRFDRKVLVGAPDVKGREAVLKVHAKNKPLASDVDL--HNVATQTPGYVGADLENV 406 Query: 543 CNEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 NEAAL+AAR ++ +I + +DR + G K Sbjct: 407 LNEAALVAARQNKKEINAADIDEGMDRAMAGPAK 440
>FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 644 Score = 226 bits (577), Expect = 3e-59 Identities = 118/211 (55%), Positives = 150/211 (71%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LLVGPPGTGKTLLAKA A E+ VPF S++GS+F+EMF+G+G +RVR+LF++A + AP IV Sbjct: 223 LLVGPPGTGKTLLAKAIANEADVPFFSVAGSEFVEMFIGIGAARVRDLFKKASENAPCIV 282 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDA+ G NDERE TLNQLL EMDGF GV+V+ TNR DILD AL Sbjct: 283 FIDEIDAV-GRERGAGVGGGNDEREQTLNQLLTEMDGFKENKGVIVVGATNRADILDAAL 341 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGRFDRQ+T++ PD GR I +++ L + + +LA TPGF+GAD+AN+ Sbjct: 342 LRPGRFDRQVTVNLPDRLGRVGILKVHARNKPLGEDVSLV--QLANRTPGFSGADLANLL 399 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGGL 638 NEAA++A R ++ IT A DRIIGG+ Sbjct: 400 NEAAILATRYKKSSITKNEVNEAADRIIGGI 430
>FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 725 Score = 218 bits (554), Expect = 2e-56 Identities = 110/213 (51%), Positives = 147/213 (69%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTLLAKATAGE+ VPF IS S F+E++VG+G RVR +F+EAR+ AP+I+ Sbjct: 249 LLGGPPGTGKTLLAKATAGEANVPFFFISASSFVELYVGLGAKRVREMFKEARKLAPAII 308 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDE+DA+ G NDERE TLNQ+LVEMDG AG++++ TNR D+LD AL Sbjct: 309 FIDELDAV-GRSRGSGIGGGNDEREQTLNQILVEMDGINENAGILIMGATNRTDVLDPAL 367 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGRFDR IT+ PDIK R++I +++ +L E + ++A TPG++GA + NV Sbjct: 368 LRPGRFDRIITVGLPDIKEREEILKLHSKGKRLSKEIKF--DKIAKRTPGYSGAQLENVI 425 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 NEA+L++ R I + AIDR++ G K Sbjct: 426 NEASLLSVREKTDVIISTQIDEAIDRVMAGPAK 458
>FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 709 Score = 210 bits (534), Expect = 3e-54 Identities = 113/213 (53%), Positives = 142/213 (66%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 +L GPPGTGKTLLAKA AGE+GVPF +GS F +M VGVG RVR+LF +A++ AP I+ Sbjct: 265 ILYGPPGTGKTLLAKAVAGEAGVPFFQSTGSGFEDMLVGVGAKRVRDLFNKAKKAAPCII 324 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEID++ S S E TLNQLL EMDGF + GVVV+A TNR D+LD AL Sbjct: 325 FIDEIDSVGSKRGRVELS-SYSVVEQTLNQLLAEMDGFTSRTGVVVMAATNRLDVLDDAL 383 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGRFDR I I+ PDIK R+ I +++ L ++ + +A TPGF+GA + NV Sbjct: 384 LRPGRFDRHIQINLPDIKEREGILQVHAKNKNLSSKISLLD--VAKRTPGFSGAQLENVI 441 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 NEA L+A R + T I M + AIDR+I G K Sbjct: 442 NEATLLAVRDNRTTINMNDIDEAIDRVIAGPAK 474
>FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 702 Score = 209 bits (531), Expect = 7e-54 Identities = 112/213 (52%), Positives = 142/213 (66%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 +L GPPGTGKTLLAKA AGE+GVPF +GS F +M VGVG RVR+LF +A++ AP I+ Sbjct: 268 ILYGPPGTGKTLLAKAVAGEAGVPFFQSTGSGFEDMLVGVGAKRVRDLFNKAKKAAPCII 327 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEID++ S S E TLNQLL EMDGF + GVVV+A TNR D+LD AL Sbjct: 328 FIDEIDSVGSKRGRVELS-SYSVVEQTLNQLLAEMDGFTSRTGVVVMAATNRLDVLDDAL 386 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGRFDR I I+ PDIK R+ I +++ L ++ + +A TPGF+GA + NV Sbjct: 387 LRPGRFDRHIQINLPDIKEREGILKVHAENKNLSSKISLLD--VAKRTPGFSGAQLENVI 444 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 NEA L+A R + T I + + AIDR+I G K Sbjct: 445 NEATLLAVRDNRTTININDIDEAIDRVIAGPAK 477
>YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) Length = 715 Score = 205 bits (521), Expect = 1e-52 Identities = 106/213 (49%), Positives = 146/213 (68%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LLVGPPGTGKTLLA+A AGE+ VPF SGS+F EMFVGVG SR+RNLF+EA+ AP ++ Sbjct: 318 LLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVI 377 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDE+D++ S + T+NQLL EMDGF GV+++ TN P+ LD AL Sbjct: 378 FIDELDSVGGKRIE---SPMHPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNAL 434 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 +RPGRFD Q+T+ +PD+KGR +I + YL K+K D + + +A T GF+GA++ N+ Sbjct: 435 IRPGRFDMQVTVPRPDVKGRTEILKWYLNKIKFDK--SVDPEIIARGTVGFSGAELENLV 492 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 N+AAL AA + +TM+ E + D+I+ G E+ Sbjct: 493 NQAALKAAVDGKEMVTMKELEFSKDKILMGPER 525
>YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) (Presenilin-associated metalloprotease) (PAMP) Length = 773 Score = 205 bits (521), Expect = 1e-52 Identities = 106/213 (49%), Positives = 146/213 (68%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LLVGPPGTGKTLLA+A AGE+ VPF SGS+F EMFVGVG SR+RNLF+EA+ AP ++ Sbjct: 376 LLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVI 435 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDE+D++ S + T+NQLL EMDGF GV+++ TN P+ LD AL Sbjct: 436 FIDELDSVGGKRIE---SPMHPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNAL 492 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 +RPGRFD Q+T+ +PD+KGR +I + YL K+K D + + +A T GF+GA++ N+ Sbjct: 493 IRPGRFDMQVTVPRPDVKGRTEILKWYLNKIKFDQ--SVDPEIIARGTVGFSGAELENLV 550 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 N+AAL AA + +TM+ E + D+I+ G E+ Sbjct: 551 NQAALKAAVDGKEMVTMKELEFSKDKILMGPER 583
>YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homolog 11) (OSD1| protein) Length = 747 Score = 204 bits (518), Expect = 2e-52 Identities = 107/220 (48%), Positives = 152/220 (69%), Gaps = 7/220 (3%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTLLA+ATAGE+GV F +SGS+F E++VGVG R+R+LF +AR AP+I+ Sbjct: 318 LLTGPPGTGKTLLARATAGEAGVDFFFMSGSEFDEVYVGVGAKRIRDLFAQARSRAPAII 377 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERE-----STLNQLLVEMDGFGTTAGVVVLAGTNRPDI 350 FIDE+DAI G + ++ TLNQLLVE+DGF T+G++++ TN P+ Sbjct: 378 FIDELDAI---------GGKRNPKDQAYAKQTLNQLLVELDGFSQTSGIIIIGATNFPEA 428 Query: 351 LDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKL-DN-EPTYFSQRLAALTPGFAG 524 LDKAL RPGRFD+ + +D PD++GR I + ++ K+ L DN +PT +A TPG +G Sbjct: 429 LDKALTRPGRFDKVVNVDLPDVRGRADILKHHMKKITLADNVDPTI----IARGTPGLSG 484 Query: 525 ADIANVCNEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 A++AN+ N+AA+ A + + + M HFE A D+I+ G E+ Sbjct: 485 AELANLVNQAAVYACQKNAVSVDMSHFEWAKDKILMGAER 524
>YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) Length = 715 Score = 200 bits (508), Expect = 3e-51 Identities = 104/213 (48%), Positives = 144/213 (67%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LLVGPPGTGKTLLA+A AGE+ VPF SGS+F EMFVGVG SR+RNLF+EA+ AP ++ Sbjct: 318 LLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVI 377 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDE+D++ + T+ QLL EMDGF GV+++ TN P+ LD AL Sbjct: 378 FIDELDSVGGKRIEFPM---HPYSRQTIIQLLAEMDGFKPNEGVIIIGATNFPEALDNAL 434 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 +RPGRFD Q+T+ +PD+KGR +I + YL K+K D + + +A T GF+GA++ N+ Sbjct: 435 IRPGRFDMQVTVPRPDVKGRTEILKWYLNKIKFDK--SVDPEIIARGTVGFSGAELENLV 492 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 N+AAL AA + +TM+ E + D+I+ G E+ Sbjct: 493 NQAALKAAVDGKEMVTMKELEFSKDKILMGPER 525
>PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 393 Score = 191 bits (486), Expect = 1e-48 Identities = 107/207 (51%), Positives = 134/207 (64%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKT+LAKA A ES F+ + S+F + FVG G VR LF+ A++ APSI+ Sbjct: 172 LLYGPPGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSII 231 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDAI SG E + TL QLL E+DGF V ++A TNR DILD AL Sbjct: 232 FIDEIDAIGAKRIDIGTSGER-EIQRTLMQLLAELDGFDPLDNVKIIAATNRIDILDPAL 290 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGRFDR I + PD KGR +IF IYL K+K+++ + L+ LT GF+GADI NVC Sbjct: 291 LRPGRFDRIIEVPLPDFKGRTEIFNIYLKKMKIEDNINL--ELLSQLTEGFSGADIKNVC 348 Query: 546 NEAALIAARTDETQITMQHFESAIDRI 626 EAA +A R ++TM AI++I Sbjct: 349 VEAAYMAIRDGRNKVTMNDLVEAINKI 375
>YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)| Length = 676 Score = 191 bits (486), Expect = 1e-48 Identities = 104/210 (49%), Positives = 139/210 (66%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LLVGPPGTGKTLLA+A AGE+ VPF +GS+F E+ VG G RVR+LF +A+ AP I+ Sbjct: 238 LLVGPPGTGKTLLARAIAGEAQVPFFHTAGSEFDEVLVGQGARRVRDLFDKAKARAPCII 297 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEID++ + + T+NQLL EMDGF G++V+A TNR D LDKAL Sbjct: 298 FIDEIDSVGSKRVS---NSIHPYANQTINQLLSEMDGFTRNEGIIVIAATNRVDDLDKAL 354 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGRFD ++T+ KPD+ GR IF YL+K+ + + LA + GF GADI N+ Sbjct: 355 LRPGRFDVRVTVPKPDLAGRVDIFNFYLSKIV--HSGGIDPKVLAKGSTGFTGADIENMV 412 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGG 635 N+AAL AA + ++TM + + A DR++ G Sbjct: 413 NQAALKAATDNAVEVTMAYLDEARDRVLMG 442
>PSMR_SULTO (Q975U2) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 392 Score = 190 bits (483), Expect = 3e-48 Identities = 108/207 (52%), Positives = 132/207 (63%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTLLAKA A ES F+ + S+F + FVG G VR +F+ AR+ APSIV Sbjct: 172 LLYGPPGTGKTLLAKAVATESNATFIQVVASEFAQKFVGEGARIVREVFELARRKAPSIV 231 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDAI SG E + TL QLL E+DGF V ++A TNR DILD AL Sbjct: 232 FIDEIDAIGAKRVDMGTSGER-EIQRTLMQLLAEIDGFKPLDNVKIIAATNRLDILDPAL 290 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGRFDR I + P+ +GR +IFRIYL K+K D Y LA++T GF+GA+I NVC Sbjct: 291 LRPGRFDRLIEVPLPNFEGRKEIFRIYLQKMKTDGNIRY--DILASMTEGFSGAEIKNVC 348 Query: 546 NEAALIAARTDETQITMQHFESAIDRI 626 EA IA R + M +AI++I Sbjct: 349 TEAGYIAIRNGRKYVNMTDLITAIEKI 375
>YME1_SCHMA (P46508) Protein YME1 homolog (EC 3.4.24.-)| Length = 662 Score = 189 bits (479), Expect = 8e-48 Identities = 103/213 (48%), Positives = 138/213 (64%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LLVGPPG GKTLLAKA +GE+ VPF+ SGS F E+ VG+G SR+R LF A+Q +P +V Sbjct: 203 LLVGPPGVGKTLLAKAVSGEAQVPFLYASGSSFDEVLVGLGASRIRQLFTTAKQNSPCLV 262 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEID++ FS + T+NQLL EMDGF + G++VL TN+ ++LDKAL Sbjct: 263 FIDEIDSV---GGNRTFSPHHPFANQTINQLLAEMDGFQSKEGIIVLGATNQAEVLDKAL 319 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGRFD QI + P +GR + +YL K+K + ++LA T G+ GADI N+ Sbjct: 320 LRPGRFDVQIHVSPPTYEGRIALLNLYLKKVKTGSNIDI--EKLAHGTVGYTGADIQNLV 377 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 N+AA+ AA ++ + M H A DR+I G K Sbjct: 378 NQAAIAAALRNDPFVEMHHLWDARDRLIMGPAK 410
>PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 436 Score = 187 bits (475), Expect = 2e-47 Identities = 103/213 (48%), Positives = 134/213 (62%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTLLAKA A + F+ ++ + ++ F+G G VR LF+ AR+ APSI+ Sbjct: 217 LLYGPPGTGKTLLAKAVANHADATFIRLAAPELVQKFIGEGARLVRELFELAREKAPSII 276 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDAI SG E + TL QLL EMDGF + V+A TNR DILD AL Sbjct: 277 FIDEIDAIGARRMRDATSGDR-EVQRTLTQLLAEMDGFDPLDDIKVIAATNRKDILDPAL 335 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGRFDR I I PD +GR +IF+I+ + L + Q+LA +T G +GADI +C Sbjct: 336 LRPGRFDRHIKIPLPDEEGRYEIFKIHTRDMNLAEDVDL--QKLAKITEGASGADIKAIC 393 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 EA ++A R D +TM F A+DR++G E+ Sbjct: 394 TEAGMMAIREDRDIVTMDDFLKAVDRVMGKKEE 426
>PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 398 Score = 183 bits (464), Expect = 4e-46 Identities = 96/208 (46%), Positives = 134/208 (64%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTLLAKA A ++ F+ + GS+F++ ++G G VR +FQ A++ APSI+ Sbjct: 179 LLYGPPGTGKTLLAKAVANQTRATFIRVVGSEFVQKYIGEGARLVREVFQLAKEKAPSII 238 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDE+DAI SG E + T+ QLL E+DGF V V+ TNR DILD A+ Sbjct: 239 FIDELDAIAARRTNSDTSGDR-EVQRTMMQLLAELDGFDPRGDVKVIGATNRIDILDPAI 297 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGRFDR I + P +GR QIF+I+ K+KL + + + LA +T G +GADI +C Sbjct: 298 LRPGRFDRIIEVPLPTFEGRIQIFKIHTRKMKLAEDVDF--KELARITEGASGADIKAIC 355 Query: 546 NEAALIAARTDETQITMQHFESAIDRII 629 EA + A R + ++TM F AI++++ Sbjct: 356 TEAGMFAIREERAKVTMLDFTKAIEKVL 383
>PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 410 Score = 180 bits (456), Expect = 4e-45 Identities = 96/209 (45%), Positives = 133/209 (63%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTLLAKA A E+ F+ I S+F+ ++G G VR +F+ A++ +PSI+ Sbjct: 189 LLYGPPGTGKTLLAKAVAHETNATFIKIVASEFVRKYIGEGARLVRGVFELAKEKSPSII 248 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDA+ SG E + TL QLL E+DGF + V ++A TNRPDILD AL Sbjct: 249 FIDEIDAVAAKRLKSSTSGDR-EVQRTLMQLLAELDGFESRGNVGIVAATNRPDILDPAL 307 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGRFDR I + P+ GR +I +I+ + + L E + LA +T G +GAD+ +C Sbjct: 308 LRPGRFDRFIEVPLPNEDGRREILKIHTSGMALAEEVDI--ELLARITDGASGADLKAIC 365 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIG 632 EA + A R + ++TM F A+D+I+G Sbjct: 366 TEAGMFAIRDERDEVTMADFMDAVDKIMG 394
>PSMR_METJA (Q58576) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 430 Score = 178 bits (452), Expect = 1e-44 Identities = 94/208 (45%), Positives = 132/208 (63%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTLLAKA A E+ F+ + GS+ ++ F+G G S V+++F+ A++ APSI+ Sbjct: 208 LLYGPPGTGKTLLAKAVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSII 267 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDAI +G + E + TL QLL EMDGF V ++ TNRPDILD A+ Sbjct: 268 FIDEIDAI-AAKRTDALTGGDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAI 326 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGRFDR I + PD KGR +I +I+ K+ L + + +A +T G GA++ +C Sbjct: 327 LRPGRFDRIIEVPAPDEKGRLEILKIHTRKMNLAEDVNL--EEIAKMTEGCVGAELKAIC 384 Query: 546 NEAALIAARTDETQITMQHFESAIDRII 629 EA + A R +TM F A+++I+ Sbjct: 385 TEAGMNAIRELRDYVTMDDFRKAVEKIM 412
>PSMR2_HALSA (Q9HRW6) Proteasome-activating nucleotidase 2 (Proteasome| regulatory subunit 2) Length = 407 Score = 177 bits (449), Expect = 2e-44 Identities = 93/207 (44%), Positives = 134/207 (64%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTL+AKA A ++ F+ ++GS+ + F+G G VR+LFQ AR P++V Sbjct: 187 LLHGPPGTGKTLMAKAVASQTDASFIKMAGSELVHKFIGEGAKLVRDLFQVARDHEPAVV 246 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDAI SG + E + T+ QLL EMDGF + ++A TNR D+LD+A+ Sbjct: 247 FIDEIDAIASKRTDSKTSG-DAEVQRTMMQLLSEMDGFDERGDIRIIAATNRFDMLDRAI 305 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGRFDR I + P++ GR++IFRI+ + + + + LAA T +GAD+ +C Sbjct: 306 LRPGRFDRLIEVPHPNVGGREKIFRIHTRAMNVADSVDF--GELAADTGDLSGADVKAIC 363 Query: 546 NEAALIAARTDETQITMQHFESAIDRI 626 EA + A R D T++ MQ F+SA +++ Sbjct: 364 TEAGMFAIRDDRTEVRMQDFQSAREKL 390
>PSMR_METMP (Q6LWR0) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 407 Score = 175 bits (443), Expect = 1e-43 Identities = 96/213 (45%), Positives = 129/213 (60%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTLLAKA A E+ F+ + GS+ ++ F+G G VR++F+ A++ +P I+ Sbjct: 186 LLYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCII 245 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDA+ +G + E + TL QLL EMDGF + V ++A TNRPDILD A+ Sbjct: 246 FIDEIDAVASKRTES-LTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAI 304 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGRFDR I I PD GR +I +I+ K+ L + +A + GAD+ VC Sbjct: 305 LRPGRFDRIIEISMPDEDGRLEILKIHTEKMNLKGVDL---REVAKIAENMVGADLKAVC 361 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 EA + A R + I M F AI +I G EK Sbjct: 362 TEAGMFAIREEREFIKMDDFREAISKITGKKEK 394
>PSMR_PYRAB (Q9V287) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 399 Score = 174 bits (441), Expect = 2e-43 Identities = 94/213 (44%), Positives = 129/213 (60%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPG GKTL+AKA A E F+ + GS+ + ++G G V LF+ A++ AP+I+ Sbjct: 178 LLYGPPGCGKTLMAKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTII 237 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDAI +G E TL QLL EMDGF V V+A TNRPDILD AL Sbjct: 238 FIDEIDAIGAKRMDET-TGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPAL 296 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGRFDR I + PD +GR +I +++ ++KL N + +A +T G +GAD+ + Sbjct: 297 LRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKLKNVDL---RVIAEITEGASGADLKAIA 353 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 EA + A R T +T + F A+D+++G K Sbjct: 354 TEAGMFAIRERRTYVTQEDFLKAVDKVLGNERK 386
>PSMR_PYRFU (Q8U4H3) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 396 Score = 173 bits (439), Expect = 3e-43 Identities = 95/213 (44%), Positives = 129/213 (60%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPG GKTL+AKA A E F+ + GS+ + ++G G V LF+ A++ AP+I+ Sbjct: 175 LLYGPPGCGKTLMAKAIAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTII 234 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDAI +G E TL QLL EMDGF V V+A TNRPDILD AL Sbjct: 235 FIDEIDAIGAKRLDET-TGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPAL 293 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGRFDR I + PD +GR +I +++ ++KL + +A LT G +GAD+ + Sbjct: 294 LRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKLRGVDL---RLIAELTEGASGADLKAIA 350 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 EA + A R T +T + F AID+++G +K Sbjct: 351 TEAGMFAIRERRTYVTQEDFLKAIDKVLGNEKK 383
>PSMR_PYRHO (O57940) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 399 Score = 172 bits (437), Expect = 6e-43 Identities = 93/213 (43%), Positives = 128/213 (60%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPG GKTL+AKA A E F+ + GS+ + ++G G V LF+ A++ AP+I+ Sbjct: 178 LLYGPPGCGKTLMAKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTII 237 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDAI +G E TL QLL EMDGF V V+A TNRPDILD AL Sbjct: 238 FIDEIDAIGAKRMDET-TGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPAL 296 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGRFDR I + PD +GR +I +++ ++KL + +A +T G +GAD+ + Sbjct: 297 LRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKLKGVDL---RAIAEMTEGASGADLKAIA 353 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 EA + A R T +T + F A+D+++G K Sbjct: 354 TEAGMFAIRERRTYVTQEDFLKAVDKVLGNERK 386
>PSMR_PYRKO (Q5JHS5) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 397 Score = 170 bits (431), Expect = 3e-42 Identities = 93/209 (44%), Positives = 124/209 (59%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPG GKTL+AKA A F+ + GS+ + F+G G V LF+ A++ AP+I+ Sbjct: 176 LLYGPPGCGKTLMAKAVANHVNATFIRVVGSELVRKFIGEGARLVHELFELAKEKAPTII 235 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDAI +G E TL QLL EMDGF V V+A TNRPDILD AL Sbjct: 236 FIDEIDAIGAKRMDET-TGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPAL 294 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGRFDR I + PD +GR +I +++ K+ L + +A +T G +GAD+ + Sbjct: 295 LRPGRFDRLIEVPLPDYQGRLEILKVHTRKMNLKGVDL---RVIAEITEGASGADLKAIA 351 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIG 632 EA + A R T +T F A+D++IG Sbjct: 352 TEAGMFAIRDRRTYVTQDDFLKAVDKVIG 380
>PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 421 Score = 169 bits (427), Expect = 8e-42 Identities = 86/207 (41%), Positives = 132/207 (63%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL G PGTGKTLLAKA A + F+ + GS+ ++ ++G G VR +F+ AR+ APSI+ Sbjct: 197 LLYGLPGTGKTLLAKAVAHRTNATFIRVVGSELVQKYIGDGSKLVREIFEMARKKAPSII 256 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDE+D+I +G++ E + TL QLL EMDGF + ++A TNRPD+LD A+ Sbjct: 257 FIDELDSIAARRLNET-TGADREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAI 315 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGRFDR + + P I+ R +I +I+ K+ L + + ++LA +T G +GAD+ + Sbjct: 316 LRPGRFDRLVHVPMPGIEARGKILKIHCGKMTLAGDIDF--KKLAKVTEGMSGADLKAIA 373 Query: 546 NEAALIAARTDETQITMQHFESAIDRI 626 EA + A R D+ + M+ F A++++ Sbjct: 374 TEAGMFAVRKDKALVEMEDFLEAVEKV 400
>PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 409 Score = 168 bits (426), Expect = 1e-41 Identities = 97/213 (45%), Positives = 129/213 (60%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTLLAKA AGE+ F+ + GS+ + F+G G VR +F+ AR+ APSI+ Sbjct: 177 LLHGPPGTGKTLLAKAVAGETEATFIRVVGSELVNKFIGEGARLVREIFRLAREKAPSIL 236 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDAI SG E + T+ QLL E+DGF V V+A TNR D++D A+ Sbjct: 237 FIDEIDAIASKRVDIGTSGDR-EVQRTMLQLLAELDGFDPLDNVKVIAATNRLDLIDPAV 295 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGRFDR I + P ++GR +I I+ K K+ P + +A LT GF+GAD+ V Sbjct: 296 LRPGRFDRIIEVPLPSLRGRLEILGIHTRKAKM--APDVDLEAIAKLTEGFSGADLKAVV 353 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 EA A R ITM A++++ L+K Sbjct: 354 VEAGYNAIRRGSRVITMDDMIKAVEKVKAALDK 386
>PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 420 Score = 168 bits (426), Expect = 1e-41 Identities = 86/207 (41%), Positives = 131/207 (63%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL G PGTGKTLLAKA A + F+ + GS+ ++ ++G G VR +F+ AR+ APSI+ Sbjct: 197 LLYGLPGTGKTLLAKAVAHRTNATFIRVVGSELVQKYIGDGSKLVREIFEMARKKAPSII 256 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDE+D+I +G++ E + TL QLL EMDGF + ++A TNRPD+LD A+ Sbjct: 257 FIDELDSIAARRLNET-TGADREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAI 315 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGRFDR + + P I+ R +I +I+ K+ L + + ++LA T G +GAD+ + Sbjct: 316 LRPGRFDRLVHVPMPGIEARGKILKIHCEKMTLAEDIDF--KKLAKATEGMSGADLKAIA 373 Query: 546 NEAALIAARTDETQITMQHFESAIDRI 626 EA + A R D+ + M+ F A++++ Sbjct: 374 TEAGMFAVRRDKELVEMEEFLEAVEKV 400
>Y1156_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156| Length = 903 Score = 166 bits (420), Expect = 5e-41 Identities = 91/189 (48%), Positives = 115/189 (60%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTLLAKA A ESG F+S+ G + +VG +R +F++ARQ AP I+ Sbjct: 490 LLFGPPGTGKTLLAKAVANESGANFISVKGPEIFSKWVGESEKAIREIFRKARQSAPCII 549 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F DEIDAI S D+ +NQLL E+DG VVV+A TNRPDI+D AL Sbjct: 550 FFDEIDAIAPKRGRDLSSAVTDK---VVNQLLTELDGMEEPKDVVVIAATNRPDIIDPAL 606 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGR DR I + PD K R IF+I+ + L + + LA T G+ GADI +C Sbjct: 607 LRPGRLDRVILVPVPDEKARLDIFKIHTRSMNLAEDVNL--EELAKKTEGYTGADIEALC 664 Query: 546 NEAALIAAR 572 EAA++A R Sbjct: 665 REAAMLAVR 673 Score = 156 bits (395), Expect = 4e-38 Identities = 94/221 (42%), Positives = 123/221 (55%), Gaps = 17/221 (7%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LLVGPPGTGKTLLAKA A E+G F I+G + M +VG +R +F+EA + APSI+ Sbjct: 217 LLVGPPGTGKTLLAKAVANEAGANFYVINGPEIMSKYVGETEENLRKIFEEAEENAPSII 276 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDAI + + + QLL MDG VVV+ TNRP+ LD AL Sbjct: 277 FIDEIDAIAPKRD----EATGEVERRLVAQLLTLMDGLKGRGQVVVIGATNRPNALDPAL 332 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 RPGRFDR+I I PD +GR +I +I+ + L + LA +T GF GAD+A +C Sbjct: 333 RRPGRFDREIVIGVPDREGRKEILQIHTRNMPLAEDVDL--DYLADVTHGFVGADLAALC 390 Query: 546 NEAALIAAR-----------------TDETQITMQHFESAI 617 EAA+ A R D ++TM F+ A+ Sbjct: 391 KEAAMRALRRVLPSIDLEAEEIPKEVLDNLKVTMDDFKEAL 431
>Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297| Length = 733 Score = 166 bits (420), Expect = 5e-41 Identities = 95/228 (41%), Positives = 131/228 (57%), Gaps = 15/228 (6%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTLLAKA A ES F+S+ G + + +VG VR +F++ARQ AP ++ Sbjct: 493 LLFGPPGTGKTLLAKAVANESNANFISVKGPELLSKWVGESEKHVREMFRKARQVAPCVI 552 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F DEID++ G + E ++QLL E+DG VVV+A TNRPD++D AL Sbjct: 553 FFDEIDSLAPRRGGI---GDSHVTERVVSQLLTELDGLEELKDVVVIAATNRPDMIDPAL 609 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGR +R I I PD K R +IF+I+L L ++ + LA T G++GADI VC Sbjct: 610 LRPGRLERHIYIPPPDKKARVEIFKIHLRGKPLADDVNI--EELAEKTEGYSGADIEAVC 667 Query: 546 NEAALIAAR---------------TDETQITMQHFESAIDRIIGGLEK 644 EA ++A R + +IT +HFE A+ ++ L K Sbjct: 668 REAGMLAIRELIKPGMTREEAKEAAKKLKITKKHFEEALKKVRPSLTK 715 Score = 157 bits (397), Expect = 3e-38 Identities = 87/189 (46%), Positives = 114/189 (60%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTL+AKA A E F+ ISG + M + G R+R +F+EA++ APSI+ Sbjct: 220 LLYGPPGTGKTLIAKAVANEVDAHFIPISGPEIMSKYYGESEQRLREIFEEAKENAPSII 279 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEID+I + + + QLL MDG V+V+A TNRPD +D AL Sbjct: 280 FIDEIDSIAPKREEV----TGEVERRVVAQLLALMDGLEARGDVIVIAATNRPDAIDPAL 335 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 RPGRFDR+I I PD +GR +I I+ K+ L + + LA LT GF GAD+ +C Sbjct: 336 RRPGRFDREIEIGVPDKEGRKEILEIHTRKMPLAEDVDL--EELAELTNGFVGADLEALC 393 Query: 546 NEAALIAAR 572 EAA+ A R Sbjct: 394 KEAAMHALR 402
>CDCH_HALSA (Q9HPF0) Protein cdcH| Length = 742 Score = 166 bits (419), Expect = 7e-41 Identities = 86/209 (41%), Positives = 129/209 (61%), Gaps = 2/209 (0%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTL+AKA A E+ F+S+ G + +VG +R F++ARQ AP+++ Sbjct: 500 LLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVAPTVI 559 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F DE+D++ +G N+ E +NQLL E+DG V+V+A TNRPDI+D AL Sbjct: 560 FFDELDSLAPGRGQ---TGGNNVSERVVNQLLTELDGLEEMEEVMVIAATNRPDIIDPAL 616 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 +R GRFDR + + +P I+GR+QI +I+ L + + + LA G+ G+D+AN+ Sbjct: 617 IRSGRFDRLVQVGQPGIEGREQILKIHTQDTPLAADVSL--RELAERADGYVGSDLANIA 674 Query: 546 NEAALIAARTDE--TQITMQHFESAIDRI 626 EAA+ A R DE + M HF +A++ + Sbjct: 675 REAAIEALRDDEDADDVGMAHFRAAMENV 703 Score = 143 bits (361), Expect = 4e-34 Identities = 86/211 (40%), Positives = 122/211 (57%), Gaps = 3/211 (1%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTLLAKA A E+ F SI+G + + + G ++R +F++A+ +PSI+ Sbjct: 227 LLHGPPGTGKTLLAKAVANETSASFFSIAGPEIISKYYGESEQQLREIFEDAKDDSPSII 286 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDE+D+I + + + QLL MDG V+V+A TNR D +D AL Sbjct: 287 FIDELDSIAPKREDV----TGEVERRVVAQLLTMMDGLEGRGQVIVIAATNRVDAVDPAL 342 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 RPGRFDR+I I PD GR++I +I+ + L ++ LA T GF GADI ++ Sbjct: 343 RRPGRFDREIEIGVPDEIGREEILKIHTRGMPLSDDVNL--STLADDTHGFVGADIESLS 400 Query: 546 NEAALIAARTDETQITMQHFE---SAIDRII 629 EAA+ A R +I + + S IDR+I Sbjct: 401 KEAAMRALRRYLPEIDLDEEDIPPSLIDRMI 431
>PRS7_SPIOL (Q41365) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 426 Score = 165 bits (417), Expect = 1e-40 Identities = 88/213 (41%), Positives = 125/213 (58%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L GPPGTGKTLLA+A A + F+ + GS+ ++ +VG G VR LFQ AR IV Sbjct: 206 LCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIV 265 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F DE+DAI G N E + T+ +++ ++DGF + VL TNRPD LD AL Sbjct: 266 FFDEVDAIGGARFDDGVGGDN-EVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPAL 324 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGR DR++ PD++GR QIF+I+ + + + + + LA L P GADI +VC Sbjct: 325 LRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRF--ELLARLCPNSTGADIRSVC 382 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 EA + A R +T + F A++++I G +K Sbjct: 383 TEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQK 415
>PRS7_ORYSA (Q9FXT9) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 426 Score = 165 bits (417), Expect = 1e-40 Identities = 88/213 (41%), Positives = 125/213 (58%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L GPPGTGKTLLA+A A + F+ + GS+ ++ +VG G VR LFQ AR IV Sbjct: 206 LCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIV 265 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F DE+DAI G N E + T+ +++ ++DGF + VL TNRPD LD AL Sbjct: 266 FFDEVDAIGGARFDDGVGGDN-EVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPAL 324 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGR DR++ PD++GR QIF+I+ + + + + + LA L P GADI +VC Sbjct: 325 LRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRF--ELLARLCPNSTGADIRSVC 382 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 EA + A R +T + F A++++I G +K Sbjct: 383 TEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQK 415
>PRS8_RAT (P62198) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid hormone receptor-interacting protein 1) (TRIP1) Length = 406 Score = 163 bits (413), Expect = 4e-40 Identities = 88/208 (42%), Positives = 127/208 (61%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTLLA+A A + F+ +SGS+ ++ F+G G VR LF AR+ APSI+ Sbjct: 187 LLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSII 246 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F+DEID+I SG + E + T+ +LL ++DGF T + V+ TNR DILD AL Sbjct: 247 FMDEIDSIGSSRLEGG-SGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSAL 305 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGR DR+I P+ + R I +I+ K+ L +++A L PG +GA++ VC Sbjct: 306 LRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINL--RKIAELMPGASGAEVKGVC 363 Query: 546 NEAALIAARTDETQITMQHFESAIDRII 629 EA + A R +T + FE A+ +++ Sbjct: 364 TEAGMYALRERRVHVTQEDFEMAVAKVM 391
>PRS8_PIG (P62197) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (TAT-binding protein homolog 10) (TBP10) Length = 406 Score = 163 bits (413), Expect = 4e-40 Identities = 88/208 (42%), Positives = 127/208 (61%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTLLA+A A + F+ +SGS+ ++ F+G G VR LF AR+ APSI+ Sbjct: 187 LLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSII 246 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F+DEID+I SG + E + T+ +LL ++DGF T + V+ TNR DILD AL Sbjct: 247 FMDEIDSIGSSRLEGG-SGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSAL 305 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGR DR+I P+ + R I +I+ K+ L +++A L PG +GA++ VC Sbjct: 306 LRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINL--RKIAELMPGASGAEVKGVC 363 Query: 546 NEAALIAARTDETQITMQHFESAIDRII 629 EA + A R +T + FE A+ +++ Sbjct: 364 TEAGMYALRERRVHVTQEDFEMAVAKVM 391
>PRS8_MOUSE (P62196) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (mSUG1) Length = 406 Score = 163 bits (413), Expect = 4e-40 Identities = 88/208 (42%), Positives = 127/208 (61%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTLLA+A A + F+ +SGS+ ++ F+G G VR LF AR+ APSI+ Sbjct: 187 LLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSII 246 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F+DEID+I SG + E + T+ +LL ++DGF T + V+ TNR DILD AL Sbjct: 247 FMDEIDSIGSSRLEGG-SGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSAL 305 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGR DR+I P+ + R I +I+ K+ L +++A L PG +GA++ VC Sbjct: 306 LRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINL--RKIAELMPGASGAEVKGVC 363 Query: 546 NEAALIAARTDETQITMQHFESAIDRII 629 EA + A R +T + FE A+ +++ Sbjct: 364 TEAGMYALRERRVHVTQEDFEMAVAKVM 391
>PRS8_HUMAN (P62195) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid hormone receptor-interacting protein 1) (TRIP1) Length = 406 Score = 163 bits (413), Expect = 4e-40 Identities = 88/208 (42%), Positives = 127/208 (61%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTLLA+A A + F+ +SGS+ ++ F+G G VR LF AR+ APSI+ Sbjct: 187 LLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSII 246 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F+DEID+I SG + E + T+ +LL ++DGF T + V+ TNR DILD AL Sbjct: 247 FMDEIDSIGSSRLEGG-SGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSAL 305 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGR DR+I P+ + R I +I+ K+ L +++A L PG +GA++ VC Sbjct: 306 LRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINL--RKIAELMPGASGAEVKGVC 363 Query: 546 NEAALIAARTDETQITMQHFESAIDRII 629 EA + A R +T + FE A+ +++ Sbjct: 364 TEAGMYALRERRVHVTQEDFEMAVAKVM 391
>PRS8_BOVIN (P62194) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) Length = 406 Score = 163 bits (413), Expect = 4e-40 Identities = 88/208 (42%), Positives = 127/208 (61%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTLLA+A A + F+ +SGS+ ++ F+G G VR LF AR+ APSI+ Sbjct: 187 LLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSII 246 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F+DEID+I SG + E + T+ +LL ++DGF T + V+ TNR DILD AL Sbjct: 247 FMDEIDSIGSSRLEGG-SGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSAL 305 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGR DR+I P+ + R I +I+ K+ L +++A L PG +GA++ VC Sbjct: 306 LRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINL--RKIAELMPGASGAEVKGVC 363 Query: 546 NEAALIAARTDETQITMQHFESAIDRII 629 EA + A R +T + FE A+ +++ Sbjct: 364 TEAGMYALRERRVHVTQEDFEMAVAKVM 391
>PRS8_DROME (O18413) 26S protease regulatory subunit 8| Length = 405 Score = 163 bits (412), Expect = 5e-40 Identities = 88/208 (42%), Positives = 127/208 (61%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTLLA+A A + F+ +SGS+ ++ F+G G VR LF AR+ APSI+ Sbjct: 186 LLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSII 245 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F+DEID+I SG + E + T+ +LL ++DGF T + V+ TNR DILD AL Sbjct: 246 FMDEIDSIGSSRIESG-SGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPAL 304 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGR DR+I P+ + R I +I+ K+ L +++A L PG +GA++ VC Sbjct: 305 LRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINL--RKIAELMPGASGAEVKGVC 362 Query: 546 NEAALIAARTDETQITMQHFESAIDRII 629 EA + A R +T + FE A+ +++ Sbjct: 363 TEAGMYALRERRVHVTQEDFEMAVAKVM 390
>PRS8_XENLA (P46470) 26S protease regulatory subunit 8 (SUG1 homolog) (xSUG1)| Length = 461 Score = 163 bits (412), Expect = 5e-40 Identities = 88/208 (42%), Positives = 127/208 (61%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTLLA+A A + F+ +SGS+ ++ F+G G VR LF AR+ APSI+ Sbjct: 182 LLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSII 241 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F+DEID+I SG + E + T+ +LL ++DGF T + V+ TNR DILD AL Sbjct: 242 FMDEIDSIGSRLEGG--SGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSAL 299 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGR DR+I P+ + R I +I+ K+ L +++A L PG +GA++ VC Sbjct: 300 LRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINL--RKIAELMPGASGAEVKGVC 357 Query: 546 NEAALIAARTDETQITMQHFESAIDRII 629 EA + A R +T + FE A+ +++ Sbjct: 358 TEAGMYALRERRVHVTQEDFEMAVAKVM 385
>PRS8_MANSE (P54814) 26S protease regulatory subunit 8 (18-56 protein)| Length = 402 Score = 163 bits (412), Expect = 5e-40 Identities = 88/208 (42%), Positives = 127/208 (61%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTLLA+A A + F+ +SGS+ ++ F+G G VR LF AR+ APSI+ Sbjct: 183 LLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSII 242 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F+DEID+I SG + E + T+ +LL ++DGF T + V+ TNR DILD AL Sbjct: 243 FMDEIDSIGSSRIESG-SGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPAL 301 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGR DR+I P+ + R I +I+ K+ L +++A L PG +GA++ VC Sbjct: 302 LRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINL--RKIAELMPGASGAEVKGVC 359 Query: 546 NEAALIAARTDETQITMQHFESAIDRII 629 EA + A R +T + FE A+ +++ Sbjct: 360 TEAGMYALRERRVHVTQEDFEMAVAKVM 387
>PRS7_PRUPE (O64982) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 425 Score = 162 bits (411), Expect = 6e-40 Identities = 87/213 (40%), Positives = 124/213 (58%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L GPPGTGKTLLA+A A + F+ + GS+ ++ +VG G VR LFQ AR IV Sbjct: 205 LCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIV 264 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F DE+DAI G N E + T+ +++ ++DGF + VL TNRPD LD AL Sbjct: 265 FFDEVDAIGGARFDDGVGGDN-EVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPAL 323 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGR DR++ PD++ R QIF+I+ + + + + + LA L P GADI +VC Sbjct: 324 LRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRF--ELLARLCPNSTGADIRSVC 381 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 EA + A R +T + F A++++I G +K Sbjct: 382 TEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQK 414
>PRS7_ARATH (Q9SSB5) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1a) (Regulatory particle triple-A ATPase subunit 1a) Length = 426 Score = 162 bits (411), Expect = 6e-40 Identities = 87/213 (40%), Positives = 124/213 (58%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L GPPGTGKTLLA+A A + F+ + GS+ ++ +VG G VR LFQ AR IV Sbjct: 206 LCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIV 265 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F DE+DAI G N E + T+ +++ ++DGF + VL TNRPD LD AL Sbjct: 266 FFDEVDAIGGARFDDGVGGDN-EVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPAL 324 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGR DR++ PD++ R QIF+I+ + + + + + LA L P GADI +VC Sbjct: 325 LRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRF--ELLARLCPNSTGADIRSVC 382 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 EA + A R +T + F A++++I G +K Sbjct: 383 TEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQK 415
>PSMR1_HALSA (Q9HNP9) Proteasome-activating nucleotidase 1 (Proteasome| regulatory subunit 1) Length = 411 Score = 160 bits (404), Expect = 4e-39 Identities = 85/208 (40%), Positives = 129/208 (62%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKT+LAKA A ++ F+ ++GS+ + F+G G VR+LF+ A Q P+I+ Sbjct: 190 LLHGPPGTGKTMLAKAVANQTDASFIKMAGSELVRKFIGEGSRLVRDLFELAEQKDPAII 249 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDA+ SG + E + T+ QLL EMDGF + ++A TNR D+LD A+ Sbjct: 250 FIDEIDAVAAKRTDSKTSG-DAEVQRTMMQLLSEMDGFDERGDIRIIAATNRFDMLDSAI 308 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGRFDR I + P+ R++I I+ ++ + + + LAA T F+GA +A++ Sbjct: 309 LRPGRFDRLIEVPNPNPDARERILEIHAGEMNVADSVDF--SDLAADTAEFSGAQLASLA 366 Query: 546 NEAALIAARTDETQITMQHFESAIDRII 629 EA + A R D ++ Q F+ A ++++ Sbjct: 367 TEAGMFAIRDDRDEVHRQDFDDAYEKLV 394
>PRS8_YEAST (Q01939) 26S protease regulatory subunit 8 homolog (SUG1 protein)| (CIM3 protein) (TAT-binding protein TBY1) Length = 405 Score = 157 bits (398), Expect = 2e-38 Identities = 83/208 (39%), Positives = 125/208 (60%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 +L GPPGTGKTLLA+A A + F+ +SG++ ++ ++G G VR LF AR+ APSI+ Sbjct: 186 ILYGPPGTGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSII 245 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F+DEID+I G + E + T+ +LL ++DGF T+ + ++ TNR DILD AL Sbjct: 246 FMDEIDSIGSTRVEGS-GGGDSEVQRTMLELLNQLDGFETSKNIKIIMATNRLDILDPAL 304 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGR DR+I P + R +I RI+ K+ L +++A G +GAD+ VC Sbjct: 305 LRPGRIDRKIEFPPPSVAARAEILRIHSRKMNLTRGINL--RKVAEKMNGCSGADVKGVC 362 Query: 546 NEAALIAARTDETQITMQHFESAIDRII 629 EA + A R +T + FE A+ +++ Sbjct: 363 TEAGMYALRERRIHVTQEDFELAVGKVM 390
>VAT_THEAC (O05209) VCP-like ATPase| Length = 745 Score = 157 bits (398), Expect = 2e-38 Identities = 90/209 (43%), Positives = 122/209 (58%), Gaps = 2/209 (0%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPG GKTLLAKA A ES F+SI G + + +VG +R +F++A+Q AP+IV Sbjct: 505 LLYGPPGVGKTLLAKAVATESNANFISIKGPEVLSKWVGESEKAIREIFKKAKQVAPAIV 564 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F+DEID+I SG E +NQLL +DG GVVV+ TNRPDI+D AL Sbjct: 565 FLDEIDSIAPRRGTTSDSGVT---ERIVNQLLTSLDGIEVMNGVVVIGATNRPDIMDPAL 621 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LR GRFD+ I I PD + R I +++ + L P +A T G+ GAD+ N+C Sbjct: 622 LRAGRFDKLIYIPPPDKEARLSILKVHTKNMPL--APDVDLNDIAQRTEGYVGADLENLC 679 Query: 546 NEAALIAAR--TDETQITMQHFESAIDRI 626 EA + A R D T ++ ++F A+ I Sbjct: 680 REAGMNAYRENPDATSVSQKNFLDALKTI 708 Score = 146 bits (369), Expect = 4e-35 Identities = 81/192 (42%), Positives = 111/192 (57%), Gaps = 3/192 (1%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 +L GPPGTGKTL+A+A A ESG F+SI+G + M + G ++R +F +A + APSI+ Sbjct: 228 ILYGPPGTGKTLIARAVANESGANFLSINGPEIMSKYYGQSEQKLREIFSKAEETAPSII 287 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEID+I + + QLL MDG V+V+ TNR D +D AL Sbjct: 288 FIDEIDSIAPKREEV----QGEVERRVVAQLLTLMDGMKERGHVIVIGATNRIDAIDPAL 343 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKL---DNEPTYFSQRLAALTPGFAGADIA 536 RPGRFDR+I I PD GR +I I+ + L + E F + +A T GF GAD+A Sbjct: 344 RRPGRFDREIEIGVPDRNGRKEILMIHTRNMPLGMSEEEKNKFLEEMADYTYGFVGADLA 403 Query: 537 NVCNEAALIAAR 572 + E+A+ A R Sbjct: 404 ALVRESAMNALR 415
>PRS7_YEAST (P33299) 26S protease regulatory subunit 7 homolog (CIM5 protein)| (TAT-binding homolog 3) Length = 467 Score = 157 bits (396), Expect = 3e-38 Identities = 82/213 (38%), Positives = 123/213 (57%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR I+ Sbjct: 247 LLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACII 306 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F DEIDA+ G N E + T+ +L+ ++DGF + V+ TNRP+ LD AL Sbjct: 307 FFDEIDAVGGARFDDGAGGDN-EVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPAL 365 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGR DR++ PD++GR IFRI+ + ++ + + ++ L P GA++ +VC Sbjct: 366 LRPGRIDRKVEFSLPDLEGRANIFRIHSKSMSVERGIRW--ELISRLCPNSTGAELRSVC 423 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 EA + A R T + F A+D++I G +K Sbjct: 424 TEAGMFAIRARRKVATEKDFLKAVDKVISGYKK 456
>PRS8_SCHPO (P41836) 26S protease regulatory subunit 8 homolog (Protein let1)| Length = 403 Score = 157 bits (396), Expect = 3e-38 Identities = 84/208 (40%), Positives = 121/208 (58%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTLLA+A A + F+ +SGS+ ++ ++G G VR LF AR+ APSI+ Sbjct: 183 LLYGPPGTGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSII 242 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F+DEID+I + E + T+ +LL ++DGF T + V+ TNR DILD AL Sbjct: 243 FMDEIDSIGSSRSDSSGGSGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPAL 302 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGR DR+I P + R +I RI+ + L S +A G +GA++ VC Sbjct: 303 LRPGRIDRKIEFPPPSAEARAEILRIHSRSMNLTRGIDLKS--IAEKMNGASGAELKGVC 360 Query: 546 NEAALIAARTDETQITMQHFESAIDRII 629 EA + A R +T + FE A+ +++ Sbjct: 361 TEAGMFALRERRVHVTQEDFELAVAKVL 388
>PRS4_ORYSA (P46466) 26S protease regulatory subunit 4 homolog (TAT-binding| protein homolog 2) Length = 448 Score = 157 bits (396), Expect = 3e-38 Identities = 86/208 (41%), Positives = 126/208 (60%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 +L G PGTGKTLLAKA A + F+ + GS+ ++ ++G GP VR LF+ A + +PSIV Sbjct: 231 ILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADELSPSIV 290 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDA+ SG E + T+ +LL ++DGF + V V+ TNR + LD AL Sbjct: 291 FIDEIDAV-GTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPAL 349 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGR DR+I PDIK R +IF+I+ +K+ L ++ + F+GADI +C Sbjct: 350 LRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLADDVNL--EEFVMTKDEFSGADIKAIC 407 Query: 546 NEAALIAARTDETQITMQHFESAIDRII 629 EA L+A R ++T F+ A ++++ Sbjct: 408 TEAGLLALRERRMKVTHADFKKAKEKVM 435
>PRS4_RAT (P62193) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 156 bits (394), Expect = 6e-38 Identities = 85/208 (40%), Positives = 127/208 (61%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 +L GPPGTGKTLLAKA A ++ F+ + GS+ ++ ++G GP VR LF+ A + APSIV Sbjct: 223 ILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIV 282 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDAI SG E + T+ +LL ++DGF + V V+ TNR + LD AL Sbjct: 283 FIDEIDAIGTKRYDSN-SGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPAL 341 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 +RPGR DR+I PD K + +IF+I+ +++ L ++ T L +GADI +C Sbjct: 342 IRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTL--DDLIMAKDDLSGADIKAIC 399 Query: 546 NEAALIAARTDETQITMQHFESAIDRII 629 EA L+A R ++T + F+ + + ++ Sbjct: 400 TEAGLMALRERRMKVTNEDFKKSKENVL 427
>PRS4_MOUSE (P62192) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 156 bits (394), Expect = 6e-38 Identities = 85/208 (40%), Positives = 127/208 (61%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 +L GPPGTGKTLLAKA A ++ F+ + GS+ ++ ++G GP VR LF+ A + APSIV Sbjct: 223 ILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIV 282 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDAI SG E + T+ +LL ++DGF + V V+ TNR + LD AL Sbjct: 283 FIDEIDAIGTKRYDSN-SGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPAL 341 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 +RPGR DR+I PD K + +IF+I+ +++ L ++ T L +GADI +C Sbjct: 342 IRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTL--DDLIMAKDDLSGADIKAIC 399 Query: 546 NEAALIAARTDETQITMQHFESAIDRII 629 EA L+A R ++T + F+ + + ++ Sbjct: 400 TEAGLMALRERRMKVTNEDFKKSKENVL 427
>PRS4_HUMAN (P62191) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 156 bits (394), Expect = 6e-38 Identities = 85/208 (40%), Positives = 127/208 (61%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 +L GPPGTGKTLLAKA A ++ F+ + GS+ ++ ++G GP VR LF+ A + APSIV Sbjct: 223 ILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIV 282 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDAI SG E + T+ +LL ++DGF + V V+ TNR + LD AL Sbjct: 283 FIDEIDAIGTKRYDSN-SGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPAL 341 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 +RPGR DR+I PD K + +IF+I+ +++ L ++ T L +GADI +C Sbjct: 342 IRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTL--DDLIMAKDDLSGADIKAIC 399 Query: 546 NEAALIAARTDETQITMQHFESAIDRII 629 EA L+A R ++T + F+ + + ++ Sbjct: 400 TEAGLMALRERRMKVTNEDFKKSKENVL 427
>PRS8_DICDI (P34124) 26S protease regulatory subunit 8 (TAT-binding protein| homolog 10) (Fragment) Length = 389 Score = 156 bits (394), Expect = 6e-38 Identities = 84/208 (40%), Positives = 124/208 (59%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTLLA+A A + F+ +SGS+ ++ ++G G VR LF AR+ APSI+ Sbjct: 169 LLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSII 228 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F+DEID+I G + E + T+ +LL ++DGF +T + VL TNR DILD AL Sbjct: 229 FMDEIDSIGSSRGESGSGGGDSEVQRTMLELLNQLDGFESTKNIKVLMCTNRIDILDPAL 288 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGR DR+I P GR I +I+ K+ L ++++ G +GA++ VC Sbjct: 289 LRPGRIDRKIEFPNPGDAGRLDILKIHSRKMNLTRGINL--KKISDKMNGASGAELKAVC 346 Query: 546 NEAALIAARTDETQITMQHFESAIDRII 629 EA + A R ++ + FE A+ +++ Sbjct: 347 TEAGMYALRERRVHVSQEDFEMAVSKVM 374
>PRS6A_ORYSA (P46465) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 429 Score = 155 bits (393), Expect = 7e-38 Identities = 83/207 (40%), Positives = 126/207 (60%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTL+A+A A ++ F+ ++G ++MF+G G VR+ FQ A++ +P I+ Sbjct: 214 LLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCII 273 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDAI SG E + T+ +LL ++DGF + + V+A TNR DILD AL Sbjct: 274 FIDEIDAIGTKRFDSEVSGDR-EVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPAL 332 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 +R GR DR+I P + R +I +I+ K+ ++ + + + LA T F GA + VC Sbjct: 333 MRSGRLDRKIEFPHPSEEARARILQIHSRKMNVNPDVNF--EELARSTDDFNGAQLKAVC 390 Query: 546 NEAALIAARTDETQITMQHFESAIDRI 626 EA ++A R D T++T + F I ++ Sbjct: 391 VEAGMLALRRDATEVTHEDFNEGIIQV 417
>PRS7_XENLA (P46472) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 433 Score = 155 bits (393), Expect = 7e-38 Identities = 84/213 (39%), Positives = 122/213 (57%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR ++ Sbjct: 213 LLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI 272 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F DEIDAI G N E + T+ +L+ ++DGF + VL TNRPD LD AL Sbjct: 273 FFDEIDAIGGARFDDGAGGDN-EVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPAL 331 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 +RPGR DR+I PD++GR IF+I+ + ++ + + + LA L P GA+I +VC Sbjct: 332 MRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRF--ELLARLCPNSTGAEIRSVC 389 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 EA + A R T + F A++++I K Sbjct: 390 TEAGMFAIRARRKVATEKDFLEAVNKVIKSYAK 422
>PRS7_RAT (Q63347) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 155 bits (392), Expect = 1e-37 Identities = 84/213 (39%), Positives = 122/213 (57%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR ++ Sbjct: 212 LLFGPPGTGKTLCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLI 271 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F DEIDAI G N E + T+ +L+ ++DGF + VL TNRPD LD AL Sbjct: 272 FFDEIDAIGGARFDDGAGGDN-EVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPAL 330 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 +RPGR DR+I PD++GR IF+I+ + ++ + + + LA L P GA+I +VC Sbjct: 331 MRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRF--ELLARLCPNSTGAEIRSVC 388 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 EA + A R T + F A++++I K Sbjct: 389 TEAGMFAIRARRKIATEKDFLEAVNKVIKSYAK 421
>PRS7_MOUSE (P46471) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 155 bits (392), Expect = 1e-37 Identities = 84/213 (39%), Positives = 122/213 (57%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR ++ Sbjct: 212 LLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI 271 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F DEIDAI G N E + T+ +L+ ++DGF + VL TNRPD LD AL Sbjct: 272 FFDEIDAIGGARFDDGAGGDN-EVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPAL 330 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 +RPGR DR+I PD++GR IF+I+ + ++ + + + LA L P GA+I +VC Sbjct: 331 MRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRF--ELLARLCPNSTGAEIRSVC 388 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 EA + A R T + F A++++I K Sbjct: 389 TEAGMFAIRARRKIATEKDFLEAVNKVIKSYAK 421
>PRS7_HUMAN (P35998) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 155 bits (392), Expect = 1e-37 Identities = 84/213 (39%), Positives = 122/213 (57%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR ++ Sbjct: 212 LLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI 271 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F DEIDAI G N E + T+ +L+ ++DGF + VL TNRPD LD AL Sbjct: 272 FFDEIDAIGGARFDDGAGGDN-EVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPAL 330 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 +RPGR DR+I PD++GR IF+I+ + ++ + + + LA L P GA+I +VC Sbjct: 331 MRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRF--ELLARLCPNSTGAEIRSVC 388 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 EA + A R T + F A++++I K Sbjct: 389 TEAGMFAIRARRKIATEKDFLEAVNKVIKSYAK 421
>SAV_SULAC (Q07590) SAV protein| Length = 780 Score = 155 bits (391), Expect = 1e-37 Identities = 85/199 (42%), Positives = 120/199 (60%), Gaps = 2/199 (1%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTLLA+A A E G F++++G + M F G R+R +F+EA + APSI+ Sbjct: 250 LLYGPPGTGKTLLARALANEIGAYFITVNGPEIMSKFYGESEQRIREIFKEAEENAPSII 309 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDAI + + + + QLL MDG V+V+ TNRPD +D AL Sbjct: 310 FIDEIDAIAPKREDV----TGEVEKRVVAQLLTLMDGIKGRGRVIVIGATNRPDAIDPAL 365 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 RPGRFDR+I I PD KGR I +++ + + ++ +LA +T G+ GAD+A + Sbjct: 366 RRPGRFDREIEIRPPDTKGRKDILQVHTRNMPITDDVDL--DKLAEMTYGYTGADLAALA 423 Query: 546 NEAALIAAR--TDETQITM 596 EAA+ A R DE ++ + Sbjct: 424 KEAAIYALRRFVDEKKLNL 442 Score = 151 bits (382), Expect = 1e-36 Identities = 82/190 (43%), Positives = 115/190 (60%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKT+LAKA A ESG F+++ G + + +VG +R +F++ARQ AP+++ Sbjct: 525 LLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWVGESEKAIREIFRKARQAAPTVI 584 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F DEID+I SG E +NQLL EMDG VV++A TNRPDILD AL Sbjct: 585 FFDEIDSIAPIRGLSTDSGVT---ERIVNQLLAEMDGIVPLNKVVIIAATNRPDILDPAL 641 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGRFDR I + PD R +I +++ + L + + + +A G+ GAD+ + Sbjct: 642 LRPGRFDRLIYVPPPDKTARFEILKVHTKNVPLAEDVSL--EDIAEKAEGYTGADLEALV 699 Query: 546 NEAALIAART 575 EA + A R+ Sbjct: 700 REATINAMRS 709
>PRS6A_LYCES (P54776) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) (Mg(2+)-dependent ATPase 1) (LEMA-1) Length = 423 Score = 155 bits (391), Expect = 1e-37 Identities = 83/207 (40%), Positives = 126/207 (60%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTL+A+A A ++ F+ ++G ++MF+G G VR+ FQ A++ +P I+ Sbjct: 208 LLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCII 267 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDAI SG E + T+ +LL ++DGF + + V+A TNR DILD AL Sbjct: 268 FIDEIDAIGTKRFDSEVSGDR-EVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPAL 326 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 +R GR DR+I P + R +I +I+ K+ ++ + + + LA T F GA + VC Sbjct: 327 MRSGRLDRKIEFPHPTEEARARILQIHSRKMNVNPDVNF--EELARSTDDFNGAQLKAVC 384 Query: 546 NEAALIAARTDETQITMQHFESAIDRI 626 EA ++A R D T++T + F I ++ Sbjct: 385 VEAGMLALRRDATEVTHEDFNEGIIQV 411
>PRS7_SCHPO (O42931) 26S protease regulatory subunit 7 homolog| Length = 438 Score = 155 bits (391), Expect = 1e-37 Identities = 81/213 (38%), Positives = 123/213 (57%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 +L GPPGTGKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR I+ Sbjct: 217 MLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACII 276 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F DEIDAI G N E + T+ +L+ ++DGF + VL TNRP+ LD+AL Sbjct: 277 FFDEIDAIGGARFDDGAGGDN-EVQRTMLELITQLDGFDPRGNIKVLFATNRPNTLDEAL 335 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 +RPGR DR++ PD++GR I RI+ + +D + + + +A L P GA++ +VC Sbjct: 336 MRPGRIDRKVEFGLPDLEGRAHILRIHAKSMAIDKDIRW--ELIARLCPSQTGAELRSVC 393 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 EA + A R T + F A+ +++ G +K Sbjct: 394 TEAGMFAIRARRRVATEKDFLDAVQKVVKGNQK 426
>PRS4_CAEEL (O16368) Probable 26S protease regulatory subunit 4| Length = 443 Score = 154 bits (390), Expect = 2e-37 Identities = 85/208 (40%), Positives = 125/208 (60%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 +L G PGTGKTLLAKA A ++ F+ I GS+ ++ ++G GP VR LF+ A + APSIV Sbjct: 226 ILYGCPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIV 285 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDA+ SG E + T+ +LL ++DGF + V VL TNR + LD AL Sbjct: 286 FIDEIDAVGTKRYDSN-SGGEREIQRTMLELLNQLDGFDSRGDVKVLMATNRIESLDPAL 344 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 +RPGR DR+I PD K + +IF+I+ +++ L E + +GADI +C Sbjct: 345 IRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTLGKEVNL--EEFITAKDELSGADIKAMC 402 Query: 546 NEAALIAARTDETQITMQHFESAIDRII 629 EA L+A R ++TM+ F+ + + ++ Sbjct: 403 TEAGLLALRERRMRVTMEDFQKSKENVL 430
>PRS4_CHICK (Q90732) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 154 bits (389), Expect = 2e-37 Identities = 84/208 (40%), Positives = 125/208 (60%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 +L GPPGTGKTLLAKA A ++ F+ + GS+ ++ ++G GP VR LF+ A + PSIV Sbjct: 223 ILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIV 282 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDAI SG E + T+ +LL ++DGF + V V+ TNR + LD AL Sbjct: 283 FIDEIDAIGTKRYDSN-SGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPAL 341 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 +RPGR DR+I PD K + +IF+I+ +++ L ++ T L +GADI +C Sbjct: 342 IRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTL--DELIMAKDDLSGADIKAIC 399 Query: 546 NEAALIAARTDETQITMQHFESAIDRII 629 EA L+A R ++T + F+ + + + Sbjct: 400 TEAGLMALRERRMKVTNEDFKKSKENFL 427
>PRS6B_ENCCU (Q8SQI9) 26S protease regulatory subunit 6B homolog| Length = 387 Score = 154 bits (389), Expect = 2e-37 Identities = 82/208 (39%), Positives = 124/208 (59%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKT+L KA A + F+ ++GS+F++ ++G GP VR++F+ AR+ APSIV Sbjct: 172 LLYGPPGTGKTMLVKAVANHTKATFIRVNGSEFVQKYLGEGPRMVRDVFRLAREKAPSIV 231 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDE+D+I S ++ E + L +LL +MDGF A V V+ TNR D +D AL Sbjct: 232 FIDEVDSIATKRFDASTS-ADREVQRVLIELLNQMDGFDPAANVKVIMATNRADTIDPAL 290 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGR DR+I PD + + +F +K+ L++ + L + ADI ++C Sbjct: 291 LRPGRLDRKIEFPLPDRRQKRLVFNAITSKMSLNDSVDI--ESLVCRPEKISCADINSIC 348 Query: 546 NEAALIAARTDETQITMQHFESAIDRII 629 EA ++A R +T + FE A +++ Sbjct: 349 QEAGMLAVRASRYMVTQRDFEEAYSKVV 376
>PRS6A_BRACM (O23894) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 424 Score = 154 bits (388), Expect = 3e-37 Identities = 84/207 (40%), Positives = 123/207 (59%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTL+A+A A ++ F+ ++G ++MF+G G VR+ FQ A++ AP I+ Sbjct: 209 LLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCII 268 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDAI SG E + T+ +LL ++DGF + + V+A TNR DILD AL Sbjct: 269 FIDEIDAIGTKRFDSEVSGDR-EVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPAL 327 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 +R GR DR+I P + R +I +I+ K+ + P + LA T F GA + VC Sbjct: 328 MRSGRLDRKIEFPHPTEEARARILQIHSRKMNV--HPDVNFEELARSTDDFNGAQLKAVC 385 Query: 546 NEAALIAARTDETQITMQHFESAIDRI 626 EA ++A R D T++ + F I ++ Sbjct: 386 VEAGMLALRRDATEVNHEDFNEGIIQV 412
>PRS7_CAEEL (Q18787) Probable 26S protease regulatory subunit 7| Length = 435 Score = 154 bits (388), Expect = 3e-37 Identities = 83/213 (38%), Positives = 121/213 (56%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR ++ Sbjct: 215 LLYGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI 274 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F DEIDA+ G N E + T+ +L+ ++DGF + VL TNRPD LD AL Sbjct: 275 FFDEIDAVGGARFDDGQGGDN-EVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPAL 333 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 +RPGR DR++ PD+ GR I +I+ ++ ++ + Y LA L P GA+I +VC Sbjct: 334 MRPGRLDRKVEFALPDLAGRAHILKIHAKQMSVERDIRY--DLLARLCPNSTGAEIRSVC 391 Query: 546 NEAALIAARTDETQITMQHFESAIDRIIGGLEK 644 EA + A R T + F AI++++ G K Sbjct: 392 TEAGMFAIRARRKVATEKDFLEAINKVVKGYAK 424
>PRS8_NAEFO (Q25544) 26S protease regulatory subunit 8 homolog (TAT-binding| protein homolog) Length = 414 Score = 154 bits (388), Expect = 3e-37 Identities = 79/208 (37%), Positives = 124/208 (59%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 ++ GPPGTGKTLLA+A A + F+ +SGS+ ++ ++G G VR LF AR+ APSI+ Sbjct: 194 IMYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSKMVRELFVMAREHAPSII 253 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F+DEID+I G + E + T+ +LL ++DGF +T + ++ TNR DILD AL Sbjct: 254 FMDEIDSIGSTRTEGGKGGGDSEVQRTMLELLNQLDGFESTQNIKIIMATNRIDILDPAL 313 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGR DR+I P+ R I +I+ ++ L +++A++ G +GA+I C Sbjct: 314 LRPGRIDRKIEFPNPNELARLDILKIHSRRMNLTRGINL--RKIASMLGGASGAEIKATC 371 Query: 546 NEAALIAARTDETQITMQHFESAIDRII 629 EA + A R +T + E A+ +++ Sbjct: 372 TEAGMFALRERRVHVTQEDLEMAVAKVM 399
>PRS4_DROME (P48601) 26S protease regulatory subunit 4 (P26s4)| Length = 439 Score = 152 bits (385), Expect = 6e-37 Identities = 83/208 (39%), Positives = 124/208 (59%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 +L GPPGTGKTLLAKA A ++ F+ + GS+ ++ ++G GP VR LF+ A + APSIV Sbjct: 222 ILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIV 281 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDA+ SG E + T+ +LL ++DGF + V V+ TNR + LD AL Sbjct: 282 FIDEIDAVGTKRYDSN-SGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPAL 340 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 +RPGR DR+I PD K + +IF I+ +++ L + L +GADI +C Sbjct: 341 IRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNL--SELIMAKDDLSGADIKAIC 398 Query: 546 NEAALIAARTDETQITMQHFESAIDRII 629 EA L+A R ++T + F+ + + ++ Sbjct: 399 TEAGLMALRERRMKVTNEDFKKSKESVL 426
>PRS4_YEAST (P40327) 26S protease regulatory subunit 4 homolog (TAT-binding| homolog 5) Length = 437 Score = 152 bits (384), Expect = 8e-37 Identities = 83/208 (39%), Positives = 123/208 (59%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 +L G PGTGKTLLAKA A ++ F+ I GS+ ++ ++G GP R +F+ A + APSIV Sbjct: 220 ILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSIV 279 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDAI SG E + T+ +LL ++DGF V V+ TN+ + LD AL Sbjct: 280 FIDEIDAIGTKRYDSN-SGGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPAL 338 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 +RPGR DR+I + PD+ + +I I+ +K+ L + + L +GADI +C Sbjct: 339 IRPGRIDRKILFENPDLSTKKKILGIHTSKMNLSEDVNL--ETLVTTKDDLSGADIQAMC 396 Query: 546 NEAALIAARTDETQITMQHFESAIDRII 629 EA L+A R Q+T + F+ A +R++ Sbjct: 397 TEAGLLALRERRMQVTAEDFKQAKERVM 424
>CDAT_PLAF7 (P46468) Putative cell division cycle ATPase| Length = 1229 Score = 151 bits (382), Expect = 1e-36 Identities = 80/183 (43%), Positives = 108/183 (59%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPG GKTLLAKA A E F+S+ G + + M+ G + VR+LF +AR +P I+ Sbjct: 972 LLYGPPGCGKTLLAKAIANECKANFISVKGPELLTMWFGESEANVRDLFDKARAASPCII 1031 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F DEID++ +ND + +NQ+L E+DG + ++A TNRPDILDKAL Sbjct: 1032 FFDEIDSLAKERNSNT---NNDASDRVINQILTEIDGINEKKTIFIIAATNRPDILDKAL 1088 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 RPGR D+ I I PD+K R IF+ L L+ + +A T GF+GADI N+C Sbjct: 1089 TRPGRLDKLIYISLPDLKSRYSIFKAILKNTPLNEDVDIHD--MAKRTEGFSGADITNLC 1146 Query: 546 NEA 554 A Sbjct: 1147 QSA 1149 Score = 131 bits (330), Expect = 1e-30 Identities = 80/186 (43%), Positives = 110/186 (59%), Gaps = 1/186 (0%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L+ G PGTGKT +AKA A ES I+G + M +G ++R +F++A + P I+ Sbjct: 565 LMHGIPGTGKTSIAKAIANESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCII 624 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERES-TLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKA 362 FIDEID+I S SN+E E ++QLL MDG V+VLA TNRP+ +D A Sbjct: 625 FIDEIDSIANKR-----SKSNNELEKRVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPA 679 Query: 363 LLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANV 542 L R GRFDR+I I PD +GR +I K+KLD P +++A G+ GAD+A + Sbjct: 680 LRRFGRFDREIEIPVPDEQGRYEILLTKTKKMKLD--PDVNLRKIAKECHGYVGADLAQL 737 Query: 543 CNEAAL 560 C EAA+ Sbjct: 738 CFEAAI 743
>AFG2_YEAST (P32794) Protein AFG2| Length = 780 Score = 151 bits (382), Expect = 1e-36 Identities = 86/213 (40%), Positives = 118/213 (55%), Gaps = 2/213 (0%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPG KTL AKA A ESG+ F+++ G + +VG +R +F++AR APSI+ Sbjct: 554 LLYGPPGCSKTLTAKALATESGINFLAVKGPEIFNKYVGESERAIREIFRKARSAAPSII 613 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F DEIDA+ S +N L LL E+DG GVV++A TNRPD +D AL Sbjct: 614 FFDEIDALSPDRDGSSTSAAN----HVLTSLLNEIDGVEELKGVVIVAATNRPDEIDAAL 669 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGR DR I + PD+ R +I + K + E LA T G++GA++ +C Sbjct: 670 LRPGRLDRHIYVGPPDVNARLEILKKCTKKFNTE-ESGVDLHELADRTEGYSGAEVVLLC 728 Query: 546 NEAALIAAR--TDETQITMQHFESAIDRIIGGL 638 EA L A D ++ ++HFE A I G+ Sbjct: 729 QEAGLAAIMEDLDVAKVELRHFEKAFKGIARGI 761 Score = 127 bits (318), Expect = 4e-29 Identities = 71/190 (37%), Positives = 107/190 (56%), Gaps = 5/190 (2%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKT+L + A S ++I+G + ++G + +R++F EAR+ PSI+ Sbjct: 283 LLHGPPGTGKTMLLRVVANTSNAHVLTINGPSIVSKYLGETEAALRDIFNEARKYQPSII 342 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEID+I S + + LL MDG G VVV+A TNRP+ +D AL Sbjct: 343 FIDEIDSIAPNRAN---DDSGEVESRVVATLLTLMDGMGAAGKVVVIAATNRPNSVDPAL 399 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLK-----LDNEPTYFSQRLAALTPGFAGAD 530 RPGRFD+++ I PD+ R I +++ LD+E + +A+ T G+ GAD Sbjct: 400 RRPGRFDQEVEIGIPDVDARFDILTKQFSRMSSDRHVLDSEAIKY---IASKTHGYVGAD 456 Query: 531 IANVCNEAAL 560 + +C E+ + Sbjct: 457 LTALCRESVM 466
>PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) (Conserved ATPase domain protein 44) (CADp44) Length = 389 Score = 151 bits (382), Expect = 1e-36 Identities = 84/207 (40%), Positives = 117/207 (56%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTLLA+A A + F+ + S ++ ++G +R +F AR P I+ Sbjct: 171 LLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCII 230 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F+DEIDAI S E + TL +LL +MDGF T V ++ TNRPD LD AL Sbjct: 231 FMDEIDAIGGRRFSEGTSADR-EIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPAL 289 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGR DR+I ID P+ + R I +I+ + E Y + + L+ GF GAD+ NVC Sbjct: 290 LRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDY--EAIVKLSDGFNGADLRNVC 347 Query: 546 NEAALIAARTDETQITMQHFESAIDRI 626 EA + A R D + + F A+ ++ Sbjct: 348 TEAGMFAIRADHDFVVQEDFMKAVRKV 374
>PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 151 bits (382), Expect = 1e-36 Identities = 84/207 (40%), Positives = 117/207 (56%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTLLA+A A + F+ + S ++ ++G +R +F AR P I+ Sbjct: 171 LLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCII 230 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F+DEIDAI S E + TL +LL +MDGF T V ++ TNRPD LD AL Sbjct: 231 FMDEIDAIGGRRFSEGTSADR-EIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPAL 289 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGR DR+I ID P+ + R I +I+ + E Y + + L+ GF GAD+ NVC Sbjct: 290 LRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDY--EAIVKLSDGFNGADLRNVC 347 Query: 546 NEAALIAARTDETQITMQHFESAIDRI 626 EA + A R D + + F A+ ++ Sbjct: 348 TEAGMFAIRADHDFVVQEDFMKAVRKV 374
>PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 151 bits (382), Expect = 1e-36 Identities = 84/207 (40%), Positives = 117/207 (56%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTLLA+A A + F+ + S ++ ++G +R +F AR P I+ Sbjct: 171 LLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCII 230 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F+DEIDAI S E + TL +LL +MDGF T V ++ TNRPD LD AL Sbjct: 231 FMDEIDAIGGRRFSEGTSADR-EIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPAL 289 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGR DR+I ID P+ + R I +I+ + E Y + + L+ GF GAD+ NVC Sbjct: 290 LRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDY--EAIVKLSDGFNGADLRNVC 347 Query: 546 NEAALIAARTDETQITMQHFESAIDRI 626 EA + A R D + + F A+ ++ Sbjct: 348 TEAGMFAIRADHDFVVQEDFMKAVRKV 374
>PR6AB_XENLA (O42586) 26S protease regulatory subunit 6A-B (TAT-binding protein| 10) (TBP-10) Length = 404 Score = 151 bits (381), Expect = 2e-36 Identities = 85/204 (41%), Positives = 122/204 (59%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L+ GPPGTGKTLLA+A A ++ F+ ++G ++MF+G G VR+ F A++ APSI+ Sbjct: 189 LMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFSLAKEKAPSII 248 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDE+DAI +G E + T+ +LL ++DGF T V V+A TNR DILD AL Sbjct: 249 FIDELDAIGNKRFDSEKAGDR-EVQRTMLELLNQLDGFQPTTQVKVIAATNRVDILDPAL 307 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LR GR DR+I P+ + R +I +I+ K+ + + Y + LA T F GA VC Sbjct: 308 LRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNY--EELARCTDDFNGAQCKAVC 365 Query: 546 NEAALIAARTDETQITMQHFESAI 617 EA +IA R T++T + + I Sbjct: 366 VEAGIIALRRGATELTHEDYMEGI 389
>PRS6A_ARATH (O04019) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 419 Score = 150 bits (380), Expect = 2e-36 Identities = 81/207 (39%), Positives = 124/207 (59%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTL+A+A A ++ F+ ++G ++MF+G G VR+ F A++ +P I+ Sbjct: 204 LLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCII 263 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDAI SG E + T+ +LL ++DGF + + V+A TNR DILD AL Sbjct: 264 FIDEIDAIGTKRFDSEVSGDR-EVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPAL 322 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 +R GR DR+I P + R +I +I+ K+ ++ + + + LA T F GA + VC Sbjct: 323 MRSGRLDRKIEFPHPTEEARGRILQIHSRKMNVNADVNF--EELARSTDDFNGAQLKAVC 380 Query: 546 NEAALIAARTDETQITMQHFESAIDRI 626 EA ++A R D T++ + F I ++ Sbjct: 381 VEAGMLALRRDATEVNHEDFNEGIIQV 407
>PRS6A_RAT (Q63569) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) (Spermatogenic cell/sperm-associated TAT-binding protein homolog SATA) Length = 439 Score = 149 bits (376), Expect = 7e-36 Identities = 84/204 (41%), Positives = 121/204 (59%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L+ GPPGTGKTLLA+A A ++ F+ ++G ++MF+G G VR+ F A++ APSI+ Sbjct: 224 LMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSII 283 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDE+DAI +G E + T+ +LL ++DGF V V+A TNR DILD AL Sbjct: 284 FIDELDAIGTKRFDSEKAGDR-EVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPAL 342 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LR GR DR+I P+ + R +I +I+ K+ + + Y + LA T F GA VC Sbjct: 343 LRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNY--EELARCTDDFNGAQCKAVC 400 Query: 546 NEAALIAARTDETQITMQHFESAI 617 EA +IA R T++T + + I Sbjct: 401 VEAGMIALRRGATELTHEDYMEGI 424
>PRS6A_HUMAN (P17980) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) (Proteasome subunit P50) Length = 439 Score = 149 bits (376), Expect = 7e-36 Identities = 84/204 (41%), Positives = 121/204 (59%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L+ GPPGTGKTLLA+A A ++ F+ ++G ++MF+G G VR+ F A++ APSI+ Sbjct: 224 LMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSII 283 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDE+DAI +G E + T+ +LL ++DGF V V+A TNR DILD AL Sbjct: 284 FIDELDAIGTKRFDSEKAGDR-EVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPAL 342 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LR GR DR+I P+ + R +I +I+ K+ + + Y + LA T F GA VC Sbjct: 343 LRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNY--EELARCTDDFNGAQCKAVC 400 Query: 546 NEAALIAARTDETQITMQHFESAI 617 EA +IA R T++T + + I Sbjct: 401 VEAGMIALRRGATELTHEDYMEGI 424
>PRS6A_MOUSE (O88685) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) Length = 442 Score = 149 bits (375), Expect = 9e-36 Identities = 85/206 (41%), Positives = 123/206 (59%), Gaps = 1/206 (0%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L+ GPPGTGKTLLA+A A ++ F+ ++G ++MF+G G VR+ F A++ APSI+ Sbjct: 227 LMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSII 286 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDE+DAI +G E + T+ +LL ++DGF V V+A TNR DILD AL Sbjct: 287 FIDELDAIGTKRFDSEKAGDR-EVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPAL 345 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LR GR DR+I P+ + R +I +I+ K+ + + Y + LA T F GA VC Sbjct: 346 LRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNY--EELARCTDDFNGAQSKAVC 403 Query: 546 NEAALIAARTDETQITMQ-HFESAID 620 EA +IA R T++T + H E ++ Sbjct: 404 VEAGMIALRRGATELTHEDHMEGILE 429
>PRS6B_DICDI (P34123) 26S protease regulatory subunit 6B homolog (TAT-binding| protein homolog 2) Length = 403 Score = 149 bits (375), Expect = 9e-36 Identities = 82/201 (40%), Positives = 123/201 (61%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKT+LAKA A + F+ + GS+F++ ++G GP VR++F+ AR+ +P+I+ Sbjct: 188 LLYGPPGTGKTMLAKAVAHHTSAAFIRVVGSEFVQKYLGEGPRLVRDVFRLARENSPAII 247 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDAI +G++ E + L +LL +MDGF + V V+ TNR D LD AL Sbjct: 248 FIDEIDAIATKRFDAQ-TGADREVQRILMELLNQMDGFDVSVNVKVIMATNRQDTLDPAL 306 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGR DR+I PD + + IF++ +K+ L +E + + +GA+I ++C Sbjct: 307 LRPGRLDRKIEFPLPDRRQKRLIFQVITSKMNLSDEVDL--EDYVSRPDKLSGAEIQSIC 364 Query: 546 NEAALIAARTDETQITMQHFE 608 EA + A R + I + FE Sbjct: 365 QEAGMHAIRKNRYVILPKDFE 385
>PRS6B_ARATH (Q9SEI4) 26S protease regulatory subunit 6B homolog (26S proteasome| AAA-ATPase subunit RPT3) (Regulatory particle triple-A ATPase subunit 3) Length = 408 Score = 148 bits (374), Expect = 1e-35 Identities = 81/201 (40%), Positives = 122/201 (60%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKT+LAKA A + F+ + GS+F++ ++G GP VR++F+ A++ AP+I+ Sbjct: 193 LLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAII 252 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDE+DAI +G++ E + L +LL +MDGF T V V+ TNR D LD AL Sbjct: 253 FIDEVDAIATARFDAQ-TGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPAL 311 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGR DR+I PD + + +F++ +K+ L +E + + + A+IA +C Sbjct: 312 LRPGRLDRKIEFPLPDRRQKRLVFQVCTSKMNLSDEVDL--EDYVSRPDKISAAEIAAIC 369 Query: 546 NEAALIAARTDETQITMQHFE 608 EA + A R + I + FE Sbjct: 370 QEAGMHAVRKNRYVILPKDFE 390
>PRS6A_SCHPO (O14126) 26S protease regulatory subunit 6A| Length = 438 Score = 148 bits (374), Expect = 1e-35 Identities = 82/204 (40%), Positives = 124/204 (60%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L+ GPPGTGKTLLA+A A +S F+ ++ ++MF+G G VR+ F A++ +P+I+ Sbjct: 223 LMFGPPGTGKTLLARACAAQSNATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKSPAII 282 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDE+DAI +G E + T+ +LL ++DGF + V V+A TNR D LD AL Sbjct: 283 FIDELDAIGTKRFDSEKAGDR-EVQRTMLELLNQLDGFSSDDRVKVIAATNRVDTLDPAL 341 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LR GR DR++ P+ + R I RI+ K+ +D++ + + LA T + GA + +VC Sbjct: 342 LRSGRLDRKLEFPLPNEEARVGILRIHSRKMAIDDDINW--EELARSTDEYNGAMLKSVC 399 Query: 546 NEAALIAARTDETQITMQHFESAI 617 EA +IA R +T+I +HF I Sbjct: 400 VEAGMIALRQGDTKINHEHFMDGI 423
>CDC48_YEAST (P25694) Cell division control protein 48| Length = 835 Score = 148 bits (373), Expect = 2e-35 Identities = 81/185 (43%), Positives = 115/185 (62%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L+ GPPGTGKTL+A+A A E+G F I+G + M G S +R F+EA + AP+I+ Sbjct: 252 LMYGPPGTGKTLMARAVANETGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAPAII 311 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEID+I + + ++QLL MDG + VVV+A TNRP+ +D AL Sbjct: 312 FIDEIDSIAPKRDKT----NGEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPAL 367 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 R GRFDR++ I PD GR ++ RI+ +KL ++ + LAA T G+ GADIA++C Sbjct: 368 RRFGRFDREVDIGIPDATGRLEVLRIHTKNMKLADDVDL--EALAAETHGYVGADIASLC 425 Query: 546 NEAAL 560 +EAA+ Sbjct: 426 SEAAM 430 Score = 140 bits (354), Expect = 2e-33 Identities = 80/199 (40%), Positives = 108/199 (54%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L GPPGTGKTLLAKA A E F+S+ G + + M+ G S +R++F +AR AP++V Sbjct: 525 LFYGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVV 584 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F+DE+D+I + + +NQLL EMDG V V+ TNRPD +D A+ Sbjct: 585 FLDELDSI-AKARGGSLGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPAI 643 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGR D+ I + PD R I L K L EP +A T GF+GAD+ + Sbjct: 644 LRPGRLDQLIYVPLPDENARLSILNAQLRKTPL--EPGLELTAIAKATQGFSGADLLYIV 701 Query: 546 NEAALIAARTDETQITMQH 602 AA A + D + QH Sbjct: 702 QRAAKYAIK-DSIEAHRQH 719
>PRS6B_RAT (Q63570) 26S protease regulatory subunit 6B (TAT-binding protein 7)| (TBP-7) Length = 418 Score = 147 bits (372), Expect = 2e-35 Identities = 82/208 (39%), Positives = 122/208 (58%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L+ GPPG GKT+LAKA A + F+ + GS+F++ ++G GP VR++F+ A++ AP+I+ Sbjct: 203 LMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAII 262 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDAI +G++ E + L +LL +MDGF V V+ TNR D LD AL Sbjct: 263 FIDEIDAIATKRFDAQ-TGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPAL 321 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGR DR+I PD + + IF +K+ L E + A +GADI ++C Sbjct: 322 LRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDL--EDYVARPDKISGADINSIC 379 Query: 546 NEAALIAARTDETQITMQHFESAIDRII 629 E+ ++A R + + + FE A +I Sbjct: 380 QESGMLAVRENRYIVLAKDFEKAYKTVI 407
>PRS6B_HUMAN (P43686) 26S protease regulatory subunit 6B (MIP224)| (MB67-interacting protein) (TAT-binding protein 7) (TBP-7) Length = 418 Score = 147 bits (372), Expect = 2e-35 Identities = 82/208 (39%), Positives = 122/208 (58%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L+ GPPG GKT+LAKA A + F+ + GS+F++ ++G GP VR++F+ A++ AP+I+ Sbjct: 203 LMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAII 262 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDAI +G++ E + L +LL +MDGF V V+ TNR D LD AL Sbjct: 263 FIDEIDAIATKRFDAQ-TGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPAL 321 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGR DR+I PD + + IF +K+ L E + A +GADI ++C Sbjct: 322 LRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDL--EDYVARPDKISGADINSIC 379 Query: 546 NEAALIAARTDETQITMQHFESAIDRII 629 E+ ++A R + + + FE A +I Sbjct: 380 QESGMLAVRENRYIVLAKDFEKAYKTVI 407
>CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Valosin-containing| protein homolog) (VCP) Length = 807 Score = 147 bits (372), Expect = 2e-35 Identities = 89/221 (40%), Positives = 125/221 (56%), Gaps = 17/221 (7%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPG+GKTL+A+A A E+G F I+G + M G S +R F+EA + APSI+ Sbjct: 246 LLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSII 305 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEID+I + ++QLL MDG + A V+V+ TNRP+ +D AL Sbjct: 306 FIDEIDSIAPKREKT----HGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPAL 361 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 R GRFDR+I I PD GR ++ RI+ +KL ++ +R+A T G+ GAD+A +C Sbjct: 362 RRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDL--ERIAKDTHGYVGADLAALC 419 Query: 546 NEAALIAAR--------TDET---------QITMQHFESAI 617 EAAL R DET +T +HF++A+ Sbjct: 420 TEAALQCIREKMDVIDLEDETIDAEVLNSMAVTNEHFQTAL 460 Score = 145 bits (365), Expect = 1e-34 Identities = 81/189 (42%), Positives = 104/189 (55%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L GPPG GKTLLAKA A E F+S+ G + + M+ G + VR +F +ARQ AP ++ Sbjct: 519 LFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVL 578 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F DE+D+I + + LNQLL EMDG V ++ TNRPDI+D AL Sbjct: 579 FFDELDSI-ATQRGSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPAL 637 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGR D+ I I PD R QIF+ L K + + LA T GF+GADI +C Sbjct: 638 LRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPIAKNVDL--RALARHTQGFSGADITEIC 695 Query: 546 NEAALIAAR 572 A A R Sbjct: 696 QRACKYAIR 704
>FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3.4.24.-)| Length = 381 Score = 147 bits (371), Expect = 3e-35 Identities = 72/135 (53%), Positives = 98/135 (72%) Frame = +3 Query: 240 GSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIK 419 G +DERE TLNQ+LVEMDGF GV+V+A TNRPD+LD AL RPGRFDRQ+ + PD+K Sbjct: 11 GGHDEREQTLNQMLVEMDGFSGNDGVIVIAATNRPDVLDPALTRPGRFDRQVVVGLPDVK 70 Query: 420 GRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVCNEAALIAARTDETQITMQ 599 GR+QI ++++ K+ + + + LA TPG++GAD+AN+ NEAAL AAR ++ +TM Sbjct: 71 GREQILKVHMRKVSVAQDVD--AMTLARGTPGYSGADLANLVNEAALFAARVNKRTVTML 128 Query: 600 HFESAIDRIIGGLEK 644 FE A D+I G E+ Sbjct: 129 EFEKAKDKINMGPER 143
>PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4| Length = 388 Score = 147 bits (370), Expect = 3e-35 Identities = 84/207 (40%), Positives = 115/207 (55%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTLLA+A A GV F+ + S ++ ++G +R +F A++ P ++ Sbjct: 170 LLYGPPGTGKTLLARAVAASLGVNFLKVVSSAIVDKYIGESARIIREMFGYAKEHEPCVI 229 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F+DEIDAI S E + TL +LL +MDGF ++ TNRPD LD AL Sbjct: 230 FMDEIDAIGGRRFSEGTSADR-EIQRTLMELLNQMDGFDYLGQTKIIMATNRPDTLDPAL 288 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGR DR+I I P+ GR +I +I+L K+ E Y + L LT G GAD+ NV Sbjct: 289 LRPGRLDRKIEIPLPNEVGRMEILKIHLEKVSKQGEIDY--EALVKLTDGTNGADLRNVV 346 Query: 546 NEAALIAARTDETQITMQHFESAIDRI 626 EA IA + D + SA ++ Sbjct: 347 TEAGFIAIKEDRDYVIQSDLMSAARKV 373
>CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog| Length = 805 Score = 147 bits (370), Expect = 3e-35 Identities = 81/189 (42%), Positives = 105/189 (55%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L GPPG GKTLLAKA A E F+S+ G + + M+ G + VR +F +ARQ AP ++ Sbjct: 519 LFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVL 578 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F DE+D+I + + LNQLL EMDG V ++ TNRPDI+D AL Sbjct: 579 FFDELDSIATQRGSSS-GDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPAL 637 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGR D+ I I PD R QIF+ L K L + + LA T GF+GAD+ +C Sbjct: 638 LRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPLSKDIDL--RALAKHTQGFSGADVTEIC 695 Query: 546 NEAALIAAR 572 A A R Sbjct: 696 QRACKYAIR 704 Score = 142 bits (359), Expect = 6e-34 Identities = 87/221 (39%), Positives = 123/221 (55%), Gaps = 17/221 (7%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPG+GKTL+A+A A E+G F I+G + M G S +R F+EA + APSI+ Sbjct: 246 LLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSII 305 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEID+I + ++QLL MDG + A V+V+ TNRP+ +D AL Sbjct: 306 FIDEIDSIAPKREKT----HGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPAL 361 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 R GRFDR+I I PD GR ++ I+ +KL E +R++ T G+ GAD+A +C Sbjct: 362 RRFGRFDREIDIGVPDEVGRLEVLGIHTKNMKLAEEVDL--ERISKDTHGYVGADLAALC 419 Query: 546 NEAALIAAR--------TDET---------QITMQHFESAI 617 EAAL R D+T +T +HF++A+ Sbjct: 420 TEAALQCIREKMDVLDLEDDTIDAEVLNSMAVTNEHFQTAL 460
>PRS6A_YEAST (P33297) 26S protease regulatory subunit 6A (TAT-binding protein| homolog 1) (TBP-1) Length = 434 Score = 146 bits (369), Expect = 4e-35 Identities = 83/208 (39%), Positives = 121/208 (58%) Frame = +3 Query: 3 ALLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSI 182 AL+ GPPGTGKTLLA+A A ++ F+ ++ ++M++G G VR+ F A++ AP+I Sbjct: 218 ALMYGPPGTGKTLLARACAAQTNATFLKLAAPQLVQMYIGEGAKLVRDAFALAKEKAPTI 277 Query: 183 VFIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKA 362 +FIDE+DAI SG E + T+ +LL ++DGF + V VLA TNR D+LD A Sbjct: 278 IFIDELDAIGTKRFDSEKSGDR-EVQRTMLELLNQLDGFSSDDRVKVLAATNRVDVLDPA 336 Query: 363 LLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANV 542 LLR GR DR+I P R QI +I+ K+ D++ + Q LA T F GA + V Sbjct: 337 LLRSGRLDRKIEFPLPSEDSRAQILQIHSRKMTTDDDINW--QELARSTDEFNGAQLKAV 394 Query: 543 CNEAALIAARTDETQITMQHFESAIDRI 626 EA +IA R ++ + + F I + Sbjct: 395 TVEAGMIALRNGQSSVKHEDFVEGISEV 422
>CD48A_ARATH (P54609) Cell division control protein 48 homolog A (AtCDC48a)| Length = 809 Score = 145 bits (367), Expect = 8e-35 Identities = 80/189 (42%), Positives = 103/189 (54%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L GPPG GKTLLAKA A E F+S+ G + + M+ G + VR +F +ARQ AP ++ Sbjct: 518 LFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVL 577 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F DE+D+I + LNQLL EMDG V ++ TNRPDI+D AL Sbjct: 578 FFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSAL 637 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGR D+ I I PD R IF+ L K + + + LA T GF+GADI +C Sbjct: 638 LRPGRLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDIGA--LAKYTQGFSGADITEIC 695 Query: 546 NEAALIAAR 572 A A R Sbjct: 696 QRACKYAIR 704 Score = 143 bits (361), Expect = 4e-34 Identities = 81/189 (42%), Positives = 113/189 (59%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPG+GKTL+A+A A E+G F I+G + M G S +R F+EA + APSI+ Sbjct: 245 LLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSII 304 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEID+I + + ++QLL MDG + A V+V+ TNRP+ +D AL Sbjct: 305 FIDEIDSIAPKREKT----NGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPAL 360 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 R GRFDR+I I PD GR ++ RI+ +KL + +R++ T G+ GAD+A +C Sbjct: 361 RRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDL--ERISKDTHGYVGADLAALC 418 Query: 546 NEAALIAAR 572 EAAL R Sbjct: 419 TEAALQCIR 427
>PRS10_CAEEL (O17071) Probable 26S protease regulatory subunit S10B (Proteasome| regulatory particle ATPase-like protein 4) Length = 406 Score = 145 bits (367), Expect = 8e-35 Identities = 81/207 (39%), Positives = 120/207 (57%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTLLA+A A + F+ + S ++ ++G +R +F AR P IV Sbjct: 188 LLFGPPGTGKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIV 247 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F+DEIDAI S ++ E + TL +LL ++DGF + V V+ TNRPD LD AL Sbjct: 248 FMDEIDAIGGRRFSEGTS-ADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPAL 306 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGR DR+I I P+ + R +I +I+ K+ E + + + L+ GF+ AD+ NVC Sbjct: 307 LRPGRLDRKIEIGLPNEQSRLEILKIHSNKITKHGEIDF--EAVVKLSDGFSAADLRNVC 364 Query: 546 NEAALIAARTDETQITMQHFESAIDRI 626 EA + A R + + + F A+ ++ Sbjct: 365 TEAGMFAIRAEREFVIDEDFMKAVRKV 391
>TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER ATPase) (15S| Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 145 bits (367), Expect = 8e-35 Identities = 79/189 (41%), Positives = 107/189 (56%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L GPPG GKTLLAKA A E F+SI G + + M+ G + VR +F +ARQ AP ++ Sbjct: 514 LFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVL 573 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F DE+D+I G + +NQ+L EMDG T V ++ TNRPDI+D A+ Sbjct: 574 FFDELDSIAKARGGNIGDGGG-AADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAI 632 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGR D+ I I PD K R I + L K + + + LA +T GF+GAD+ +C Sbjct: 633 LRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDL--EFLAKMTNGFSGADLTEIC 690 Query: 546 NEAALIAAR 572 A +A R Sbjct: 691 QRACKLAIR 699 Score = 143 bits (361), Expect = 4e-34 Identities = 82/189 (43%), Positives = 114/189 (60%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTL+A+A A E+G F I+G + M G S +R F+EA + AP+I+ Sbjct: 241 LLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAII 300 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDE+DAI + ++QLL MDG A V+V+A TNRP+ +D AL Sbjct: 301 FIDELDAIAPKREKT----HGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPAL 356 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 R GRFDR++ I PD GR +I +I+ +KL ++ +++A T G GAD+A +C Sbjct: 357 RRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDL--EQVANETHGHVGADLAALC 414 Query: 546 NEAALIAAR 572 +EAAL A R Sbjct: 415 SEAALQAIR 423
>TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER ATPase) (15S| Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 145 bits (367), Expect = 8e-35 Identities = 79/189 (41%), Positives = 107/189 (56%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L GPPG GKTLLAKA A E F+SI G + + M+ G + VR +F +ARQ AP ++ Sbjct: 514 LFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVL 573 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F DE+D+I G + +NQ+L EMDG T V ++ TNRPDI+D A+ Sbjct: 574 FFDELDSIAKARGGNIGDGGG-AADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAI 632 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGR D+ I I PD K R I + L K + + + LA +T GF+GAD+ +C Sbjct: 633 LRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDL--EFLAKMTNGFSGADLTEIC 690 Query: 546 NEAALIAAR 572 A +A R Sbjct: 691 QRACKLAIR 699 Score = 143 bits (361), Expect = 4e-34 Identities = 82/189 (43%), Positives = 114/189 (60%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTL+A+A A E+G F I+G + M G S +R F+EA + AP+I+ Sbjct: 241 LLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAII 300 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDE+DAI + ++QLL MDG A V+V+A TNRP+ +D AL Sbjct: 301 FIDELDAIAPKREKT----HGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPAL 356 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 R GRFDR++ I PD GR +I +I+ +KL ++ +++A T G GAD+A +C Sbjct: 357 RRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDL--EQVANETHGHVGADLAALC 414 Query: 546 NEAALIAAR 572 +EAAL A R Sbjct: 415 SEAALQAIR 423
>TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (TER ATPase) (15S| Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 145 bits (367), Expect = 8e-35 Identities = 79/189 (41%), Positives = 107/189 (56%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L GPPG GKTLLAKA A E F+SI G + + M+ G + VR +F +ARQ AP ++ Sbjct: 514 LFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVL 573 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F DE+D+I G + +NQ+L EMDG T V ++ TNRPDI+D A+ Sbjct: 574 FFDELDSIAKARGGNIGDGGG-AADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAI 632 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGR D+ I I PD K R I + L K + + + LA +T GF+GAD+ +C Sbjct: 633 LRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDL--EFLAKMTNGFSGADLTEIC 690 Query: 546 NEAALIAAR 572 A +A R Sbjct: 691 QRACKLAIR 699 Score = 143 bits (361), Expect = 4e-34 Identities = 82/189 (43%), Positives = 114/189 (60%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTL+A+A A E+G F I+G + M G S +R F+EA + AP+I+ Sbjct: 241 LLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAII 300 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDE+DAI + ++QLL MDG A V+V+A TNRP+ +D AL Sbjct: 301 FIDELDAIAPKREKT----HGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPAL 356 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 R GRFDR++ I PD GR +I +I+ +KL ++ +++A T G GAD+A +C Sbjct: 357 RRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDL--EQVANETHGHVGADLAALC 414 Query: 546 NEAALIAAR 572 +EAAL A R Sbjct: 415 SEAALQAIR 423
>TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (TER ATPase) (15S| Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 145 bits (367), Expect = 8e-35 Identities = 79/189 (41%), Positives = 107/189 (56%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L GPPG GKTLLAKA A E F+SI G + + M+ G + VR +F +ARQ AP ++ Sbjct: 514 LFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVL 573 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F DE+D+I G + +NQ+L EMDG T V ++ TNRPDI+D A+ Sbjct: 574 FFDELDSIAKARGGNIGDGGG-AADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAI 632 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGR D+ I I PD K R I + L K + + + LA +T GF+GAD+ +C Sbjct: 633 LRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDL--EFLAKMTNGFSGADLTEIC 690 Query: 546 NEAALIAAR 572 A +A R Sbjct: 691 QRACKLAIR 699 Score = 143 bits (361), Expect = 4e-34 Identities = 82/189 (43%), Positives = 114/189 (60%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTL+A+A A E+G F I+G + M G S +R F+EA + AP+I+ Sbjct: 241 LLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAII 300 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDE+DAI + ++QLL MDG A V+V+A TNRP+ +D AL Sbjct: 301 FIDELDAIAPKREKT----HGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPAL 356 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 R GRFDR++ I PD GR +I +I+ +KL ++ +++A T G GAD+A +C Sbjct: 357 RRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDL--EQVANETHGHVGADLAALC 414 Query: 546 NEAALIAAR 572 +EAAL A R Sbjct: 415 SEAALQAIR 423
>PRS6B_SOLTU (P54778) 26S protease regulatory subunit 6B homolog| Length = 413 Score = 145 bits (366), Expect = 1e-34 Identities = 80/201 (39%), Positives = 120/201 (59%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKT+LAKA A + F+ + GS+F++ ++G GP VR++F+ A++ AP+I+ Sbjct: 198 LLYGPPGTGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAII 257 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDE+DAI +G++ E + L +LL +MDGF T V V+ TNR D LD AL Sbjct: 258 FIDEVDAIATARFDAQ-TGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPAL 316 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGR DR+I PD + + +F++ K+ L +E + + + A+I +C Sbjct: 317 LRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDL--EDYVSRPDKISAAEITAIC 374 Query: 546 NEAALIAARTDETQITMQHFE 608 EA + A R + I + FE Sbjct: 375 QEAGMHAVRKNRYVILPKDFE 395
>CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48| Length = 815 Score = 145 bits (366), Expect = 1e-34 Identities = 80/201 (39%), Positives = 120/201 (59%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L+ GPPGTGKTL+A+A A E+G F I+G + M G S +R F+EA + +P+I+ Sbjct: 262 LMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAII 321 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEID+I + + ++QLL MDG + VVV+A TNRP+ +D AL Sbjct: 322 FIDEIDSIAPKREKT----NGEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPAL 377 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 R GRFDR++ + PD GR +I RI+ +KL ++ +++AA T G+ G+D+A++C Sbjct: 378 RRFGRFDREVDVGIPDPTGRLEILRIHTKNMKLADDVDL--EQIAAETHGYVGSDLASLC 435 Query: 546 NEAALIAARTDETQITMQHFE 608 +EAA+ R I + E Sbjct: 436 SEAAMQQIREKMDMIDLDEDE 456 Score = 136 bits (342), Expect = 6e-32 Identities = 75/189 (39%), Positives = 107/189 (56%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L GPPGTGKTLLAKA A E F+S+ G + + M+ G S VR++F +AR AP +V Sbjct: 535 LFFGPPGTGKTLLAKAIANECSANFISVKGPELLSMWFGESESNVRDIFDKARAAAPCVV 594 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F+DE+D+I +G + + +NQLL EMDG + V V+ TNRPD +D AL Sbjct: 595 FLDELDSIAKARGAS--AGDSGGGDRVVNQLLTEMDGVNSKKNVFVIGATNRPDQIDPAL 652 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 +RPGR D+ I + PD + R I + L + + + +A T GF+GAD+ V Sbjct: 653 MRPGRLDQLIYVPLPDEEARFSILQTQLRHTPVAEDVDL--RAVAKATHGFSGADLEFVV 710 Query: 546 NEAALIAAR 572 A +A + Sbjct: 711 QRAVKLAIK 719
>CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 homolog D| (AtCDC48d) (Transitional endoplasmic reticulum ATPase D) Length = 815 Score = 144 bits (364), Expect = 2e-34 Identities = 81/189 (42%), Positives = 106/189 (56%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L GPPG GKTLLAKA A E F+SI G + + M+ G + VR +F +ARQ AP ++ Sbjct: 519 LFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVL 578 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F DE+D+I + + LNQLL EMDG V ++ TNRPDI+D AL Sbjct: 579 FFDELDSI-ATQRGNSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPAL 637 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGR D+ I I PD + R QIF+ L K + + + LA T GF+GADI +C Sbjct: 638 LRPGRLDQLIYIPLPDEESRYQIFKSCLRKSPVAKDVDL--RALAKYTQGFSGADITEIC 695 Query: 546 NEAALIAAR 572 + A R Sbjct: 696 QRSCKYAIR 704 Score = 142 bits (358), Expect = 8e-34 Identities = 81/189 (42%), Positives = 112/189 (59%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPG+GKTL+A+A A E+G F I+G + M G S +R F+EA + APSI+ Sbjct: 246 LLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSII 305 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEID+I + ++QLL MDG + A V+V+ TNRP+ +D AL Sbjct: 306 FIDEIDSIAPKREKT----HGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPAL 361 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 R GRFDR+I I PD GR ++ RI+ +KL + +R++ T G+ GAD+A +C Sbjct: 362 RRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDL--ERVSKDTHGYVGADLAALC 419 Query: 546 NEAALIAAR 572 EAAL R Sbjct: 420 TEAALQCIR 428
>PRS6B_CAEEL (P46502) Probable 26S protease regulatory subunit 6B| Length = 414 Score = 144 bits (363), Expect = 2e-34 Identities = 78/208 (37%), Positives = 122/208 (58%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L+ GPPG GKT+LAKA A + F+ + GS+F++ ++G GP VR++F+ A++ +PSI+ Sbjct: 199 LMYGPPGCGKTMLAKAVAANTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSII 258 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDAI +G++ E + L +LL +MDGF + V V+ TNR D LD AL Sbjct: 259 FIDEIDAIATKRFDAQ-TGADREVQRILLELLNQMDGFDQSTNVKVIMATNRQDTLDPAL 317 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGR DR+I PD + + +F +++ L ++ + A +GADI ++C Sbjct: 318 LRPGRLDRKIEFPLPDRRQKRLVFSTVCSRMNLSDDVDL--EDWVARPDKISGADINSIC 375 Query: 546 NEAALIAARTDETQITMQHFESAIDRII 629 EA + A R + + + E A ++ Sbjct: 376 QEAGMQAVRENRYVVLTKDLEKAYKNVV 403
>PRS10_YEAST (P53549) 26S protease subunit RPT4 (26S protease subunit SUG2)| (Proteasomal cap subunit) Length = 437 Score = 144 bits (363), Expect = 2e-34 Identities = 81/207 (39%), Positives = 112/207 (54%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTLLAKA A G F+ S ++ ++G +R +F A++ P I+ Sbjct: 219 LLYGPPGTGKTLLAKAVAATIGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCII 278 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F+DE+DAI S E + TL +LL +MDGF ++ TNRPD LD AL Sbjct: 279 FMDEVDAIGGRRFSEGTSADR-EIQRTLMELLTQMDGFDNLGQTKIIMATNRPDTLDPAL 337 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGR DR++ I P+ GR +IF+I+ K+K E + + ++ GF GADI N Sbjct: 338 LRPGRLDRKVEIPLPNEAGRLEIFKIHTAKVKKTGE--FDFEAAVKMSDGFNGADIRNCA 395 Query: 546 NEAALIAARTDETQITMQHFESAIDRI 626 EA A R D I A+ ++ Sbjct: 396 TEAGFFAIRDDRDHINPDDLMKAVRKV 422
>PRS4_SCHPO (P36612) 26S protease regulatory subunit 4 homolog (Protein mts2)| Length = 448 Score = 144 bits (362), Expect = 3e-34 Identities = 81/209 (38%), Positives = 123/209 (58%), Gaps = 1/209 (0%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 +L G PGTGKTLLAKA A ++ F+ + GS+ ++ ++G GP VR LF A + +PSIV Sbjct: 229 ILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPSIV 288 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTT-AGVVVLAGTNRPDILDKA 362 FIDEIDAI SG+ E + T+ +LL ++DGF T+ + V+ TNR LD A Sbjct: 289 FIDEIDAIGTKRYDAQ-SGAEREIQRTMLELLNQLDGFDTSQRDIKVIMATNRISDLDPA 347 Query: 363 LLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANV 542 L+RPGR DR+I + PD + +IF I+ +K+ L + + L +GA+I + Sbjct: 348 LIRPGRIDRKILFENPDEATKRKIFTIHTSKMNLGEDVNL--EELIQCKDDLSGAEIKAI 405 Query: 543 CNEAALIAARTDETQITMQHFESAIDRII 629 +EA L+A R ++ M F A ++++ Sbjct: 406 VSEAGLLALRERRMRVVMDDFRQAREKVL 434
>TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) Length = 805 Score = 144 bits (362), Expect = 3e-34 Identities = 82/189 (43%), Positives = 114/189 (60%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTL+A+A A E+G F I+G + M G S +R F+EA + AP+I+ Sbjct: 242 LLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAII 301 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDE+DAI + ++QLL MDG A V+V+A TNRP+ +D AL Sbjct: 302 FIDELDAIAPKREKT----HGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPAL 357 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 R GRFDR++ I PD GR +I +I+ +KL ++ +++A T G GAD+A +C Sbjct: 358 RRFGRFDREVDIGIPDSTGRLEILQIHTKNMKLSDDVDL--EQVANETHGHVGADLAALC 415 Query: 546 NEAALIAAR 572 +EAAL A R Sbjct: 416 SEAALQAIR 424 Score = 142 bits (359), Expect = 6e-34 Identities = 78/189 (41%), Positives = 105/189 (55%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L GPPG GKTLLAKA A E F+SI G + + M+ G + VR +F +ARQ AP ++ Sbjct: 515 LFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVL 574 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F DE+D+I G + +NQ+L EMDG V ++ TNRPDI+D A+ Sbjct: 575 FFDELDSIAKARGGNIGDGGG-AADRVINQILTEMDGMSIKKNVFIIGATNRPDIIDPAI 633 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGR D+ I I PD K R I + L K + + LA +T GF+GAD+ +C Sbjct: 634 LRPGRLDQLIYIPLPDEKSRMAILKANLRKSPVAKDVDV--DFLAKMTNGFSGADLTEIC 691 Query: 546 NEAALIAAR 572 A +A R Sbjct: 692 QRACKLAIR 700
>CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E (AtCDC48e)| (Transitional endoplasmic reticulum ATPase E) Length = 810 Score = 143 bits (361), Expect = 4e-34 Identities = 81/189 (42%), Positives = 113/189 (59%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPG+GKTL+A+A A E+G F I+G + M G S +R F+EA + APSI+ Sbjct: 245 LLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSII 304 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEID+I + + ++QLL MDG + A V+V+ TNRP+ +D AL Sbjct: 305 FIDEIDSIAPKREKT----NGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPAL 360 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 R GRFDR+I I PD GR ++ RI+ +KL + +R++ T G+ GAD+A +C Sbjct: 361 RRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDL--ERISKDTHGYVGADLAALC 418 Query: 546 NEAALIAAR 572 EAAL R Sbjct: 419 TEAALQCIR 427 Score = 143 bits (360), Expect = 5e-34 Identities = 80/189 (42%), Positives = 104/189 (55%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L GPPG GKTLLAKA A E F+S+ G + + M+ G + VR +F +ARQ AP ++ Sbjct: 518 LFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVL 577 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F DE+D+I + + LNQLL EMDG V ++ TNRPDI+D AL Sbjct: 578 FFDELDSIATQRGNSA-GDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSAL 636 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGR D+ I I PD R IF+ L K + + + LA T GF+GADI +C Sbjct: 637 LRPGRLDQLIYIPLPDEDSRLNIFKACLRKSPVAKDVDVTA--LAKYTQGFSGADITEIC 694 Query: 546 NEAALIAAR 572 A A R Sbjct: 695 QRACKYAIR 703
>PRS6B_MOUSE (P54775) 26S protease regulatory subunit 6B (MIP224)| (MB67-interacting protein) (TAT-binding protein 7) (TBP-7) (CIP21) Length = 418 Score = 143 bits (361), Expect = 4e-34 Identities = 81/208 (38%), Positives = 119/208 (57%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L+ GPPG GKT+LAKA A + F+ + GS+F++ ++G GP VR++F+ A++ AP+I+ Sbjct: 203 LMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAII 262 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDAI +G++ E + L +LL +MDGF V V+ TNR D LD AL Sbjct: 263 FIDEIDAIATKRFDAQ-TGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPAL 321 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGR DR+I PD + + IF +K+ L E + A +GADI ++C Sbjct: 322 LRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDL--EDYVARPDKISGADINSIC 379 Query: 546 NEAALIAARTDETQITMQHFESAIDRII 629 ++A R + + FE A +I Sbjct: 380 QARGMLAVRETAYIVLAKDFEKAYKTVI 407
>TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase homolog 1| (p97/CDC48 homolog 1) Length = 809 Score = 143 bits (360), Expect = 5e-34 Identities = 79/191 (41%), Positives = 106/191 (55%), Gaps = 2/191 (1%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L GPPG GKTLLAKA A E F+SI G + + M+ G + VR++F +AR AP ++ Sbjct: 521 LFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVL 580 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F DE+D+I + +NQ+L EMDG V ++ TNRPDI+D A+ Sbjct: 581 FFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAV 640 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYL--TKLKLDNEPTYFSQRLAALTPGFAGADIAN 539 LRPGR D+ I I PD R QI + L T L D + T+ LA T GF+GAD+ Sbjct: 641 LRPGRLDQLIYIPLPDEASRHQILKASLRKTPLSKDLDLTF----LAKNTVGFSGADLTE 696 Query: 540 VCNEAALIAAR 572 +C A +A R Sbjct: 697 ICQRACKLAIR 707 Score = 138 bits (347), Expect = 2e-32 Identities = 80/185 (43%), Positives = 112/185 (60%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTL+A+A A E+G F I+G + M G S +R F+E + P+I+ Sbjct: 248 LLFGPPGTGKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAIL 307 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDAI + + ++QLL MDG + +VV+A TNRP+ +D AL Sbjct: 308 FIDEIDAIAPKREKT----NGEVERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGAL 363 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 R GRFDR+I I PD GR +I RI+ +KL ++ +++A GF GAD+A++C Sbjct: 364 RRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLADDVDL--EQIANECHGFVGADLASLC 421 Query: 546 NEAAL 560 +EAAL Sbjct: 422 SEAAL 426
>CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B (AtCDC48b)| Length = 603 Score = 143 bits (360), Expect = 5e-34 Identities = 77/205 (37%), Positives = 118/205 (57%), Gaps = 2/205 (0%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPG KT LAKA A + F S+S ++ M+VG G + +RN FQ AR +PSI+ Sbjct: 324 LLHGPPGCSKTTLAKAAANAAQASFFSLSCAELFSMYVGEGEALLRNTFQRARLASPSII 383 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F DE D + S S+ E L+ LL EMDG G++VLA TNRP +D AL Sbjct: 384 FFDEADVVACKRGDESSSNSSTVGERLLSTLLTEMDGLEEAKGILVLAATNRPYAIDAAL 443 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 +RPGRFD + + PD++ R +I +++ + L ++ +++A T F GA++ +C Sbjct: 444 MRPGRFDLVLYVPPPDLEARFEILQVHTRNMTLGDDVDL--RKIAEETDLFTGAELEGLC 501 Query: 546 NEAALIAARTD--ETQITMQHFESA 614 E+ ++ R + T + +HF++A Sbjct: 502 RESGTVSLRENIAATAVFNRHFQTA 526 Score = 100 bits (250), Expect = 3e-21 Identities = 71/212 (33%), Positives = 104/212 (49%), Gaps = 9/212 (4%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCA---- 173 LL GPPGTGKT L +A E + +S G +R F EA A Sbjct: 60 LLYGPPGTGKTSLVRAVVQECDAHLIVLSPHSVHRAHAGESEKVLREAFAEASSHAVSDK 119 Query: 174 PSIVFIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAG---VVVLAGTNRP 344 PS++FIDEID + ++ +QL MD ++ VVV+A TNR Sbjct: 120 PSVIFIDEIDVLCPRR-----DARREQDVRIASQLFTLMDSNKPSSSAPRVVVVASTNRV 174 Query: 345 DILDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAG 524 D +D AL R GRFD + + P+ + R +I ++Y K+ LD P+ Q +A G+ G Sbjct: 175 DAIDPALRRAGRFDALVEVSTPNEEDRLKILQLYTKKVNLD--PSVDLQAIAISCNGYVG 232 Query: 525 ADIANVCNEAALIAAR--TDETQITMQHFESA 614 AD+ +C EA + A++ +D +T Q F+ A Sbjct: 233 ADLEALCREATISASKRSSDSLILTSQDFKIA 264
>TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase homolog 2| (p97/CDC48 homolog 2) Length = 810 Score = 142 bits (358), Expect = 8e-34 Identities = 82/185 (44%), Positives = 112/185 (60%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTL+A+A A E+G F I+G + M G S +R F E + +P+I+ Sbjct: 247 LLFGPPGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAIL 306 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDAI + + ++QLL MDG T A VVV+A TNRP+ +D AL Sbjct: 307 FIDEIDAIAPKRE----KAHGEVEKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGAL 362 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 R GRFDR+I I PD GR +I RI+ +KL + +++A GF GAD+A++C Sbjct: 363 RRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLGEDVDL--EQVANECHGFVGADLASLC 420 Query: 546 NEAAL 560 +EAA+ Sbjct: 421 SEAAI 425 Score = 140 bits (352), Expect = 4e-33 Identities = 78/189 (41%), Positives = 105/189 (55%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L GPPG GKTLLAKA A E F+SI G + + M+ G + VR++F +AR AP ++ Sbjct: 520 LFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVL 579 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F DE+D+I + + +NQ+L EMDG V ++ TNRPDI+D A+ Sbjct: 580 FFDELDSI-AKARGGSVGDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAV 638 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGR D+ I I PD R QIF+ L K L + LA T GF+GAD+ +C Sbjct: 639 LRPGRLDQLIYIPLPDEASRLQIFKASLRKTPLSADLDL--NFLAKNTVGFSGADLTEIC 696 Query: 546 NEAALIAAR 572 A +A R Sbjct: 697 QRACKLAIR 705
>PRS6B_MANSE (P46507) 26S protease regulatory subunit 6B (ATPase MS73)| Length = 415 Score = 141 bits (356), Expect = 1e-33 Identities = 80/201 (39%), Positives = 116/201 (57%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L+ GPPG GKT+LA A A + F+ + GS+F++ ++G GP VR++F+ A++ +P+I+ Sbjct: 200 LMYGPPGCGKTMLANAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPAII 259 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDAI +G++ E + L +LL +MDGF T V V+ TNR D LD AL Sbjct: 260 FIDEIDAIATKRFDAQ-TGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPAL 318 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGR DR+I PD + + IF K+ L E + A +GADI +C Sbjct: 319 LRPGRLDRKIEFPLPDRRQKRLIFSTITAKMNLSEEVDL--EEFVARPDRVSGADINAIC 376 Query: 546 NEAALIAARTDETQITMQHFE 608 EA + A R + + + FE Sbjct: 377 QEAGMNAVRENRYIVLPKDFE 397
>PRS6B_SCHPO (O74894) 26S protease regulatory subunit 6B homolog| Length = 389 Score = 138 bits (348), Expect = 1e-32 Identities = 85/212 (40%), Positives = 120/212 (56%), Gaps = 4/212 (1%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKT+L KA A + F+ + GS+F++ ++G GP VR++F+ AR+ AP+I+ Sbjct: 172 LLYGPPGTGKTMLVKAVANSTAANFIRVVGSEFVQKYLGEGPRMVRDVFRMARENAPAII 231 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDAI +G++ E + L +LL +MDGF A V V+ TNR D LD AL Sbjct: 232 FIDEIDAIATKRFDAQ-TGADREVQRILIELLTQMDGFDQGANVKVIMATNRADTLDPAL 290 Query: 366 LRPGRFDRQITIDK-PDIKGRDQIFRIYLTKLKLDNE---PTYFSQRLAALTPGFAGADI 533 LRPGR DR+I D + R +F+ K+ L E T+ + A+ +GA I Sbjct: 291 LRPGRLDRKIEFPSYRDRRQRRLVFQTITAKMLLSPEVDLDTFIMRPDAS-----SGAQI 345 Query: 534 ANVCNEAALIAARTDETQITMQHFESAIDRII 629 A + +A L+A R I E A R + Sbjct: 346 AAIMQDAGLLAVRKSRGVILQSDIEEAYARAV 377
>NVL_MOUSE (Q9DBY8) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 855 Score = 138 bits (348), Expect = 1e-32 Identities = 83/221 (37%), Positives = 116/221 (52%), Gaps = 14/221 (6%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPG GKTLLAKA A ESG+ F+S+ G + + M+VG VR +FQ A+ AP ++ Sbjct: 618 LLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVI 677 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F DE+DA+ S +NQLL EMDG T V +LA TNRPDI+D A+ Sbjct: 678 FFDEVDALCPRRSDRETGAS----VRVVNQLLTEMDGLETRQQVFILAATNRPDIIDPAI 733 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYL---TKLKLDNEPTYFSQRLAALTPGFAGADIA 536 LRPGR D+ + + P R I + TK LD + + + GAD+ Sbjct: 734 LRPGRLDKTLFVGLPPPADRVAILKTITKNGTKPPLDEDVNLETIANDLRCNCYTGADLT 793 Query: 537 NVCNEAALIAARTD-----------ETQITMQHFESAIDRI 626 + EA+L A R + E +++ +HFE A ++ Sbjct: 794 ALVREASLCALRQEITAQKNGVGAGELKVSHKHFEDAFKKV 834 Score = 135 bits (339), Expect = 1e-31 Identities = 83/190 (43%), Positives = 106/190 (55%), Gaps = 3/190 (1%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPG GKTLLA A AGE +P + ++ + + G ++R LF +A AP IV Sbjct: 301 LLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFDQAVSNAPCIV 360 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMD---GFGTTAGVVVLAGTNRPDILD 356 FIDEIDAI S D + QLL MD TA V+V+ TNRPD LD Sbjct: 361 FIDEIDAITPKREV----ASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLD 416 Query: 357 KALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIA 536 AL R GRFDR++ + PD R++I + KL+L T+ LA LTPGF GAD+ Sbjct: 417 PALRRAGRFDREVCLGIPDEAARERILQTLCRKLRLPE--TFNFCHLAHLTPGFVGADLM 474 Query: 537 NVCNEAALIA 566 +C EAA+ A Sbjct: 475 ALCREAAMCA 484
>PRS6B_YEAST (P33298) 26S protease regulatory subunit 6B homolog (YNT1 protein)| (TAT-binding homolog 2) Length = 428 Score = 137 bits (345), Expect = 3e-32 Identities = 85/204 (41%), Positives = 115/204 (56%), Gaps = 1/204 (0%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKT+L KA A + F+ ++GS+F+ ++G GP VR++F+ AR+ APSI+ Sbjct: 210 LLYGPPGTGKTMLVKAVANSTKAAFIRVNGSEFVHKYLGEGPRMVRDVFRLARENAPSII 269 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDE+D+I +GS+ E + L +LL +MDGF + V V+ TNR D LD AL Sbjct: 270 FIDEVDSIATKRFDAQ-TGSDREVQRILIELLTQMDGFDQSTNVKVIMATNRADTLDPAL 328 Query: 366 LRPGRFDRQITID-KPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANV 542 LRPGR DR+I D + R IF +K+ L E S L +GA IA + Sbjct: 329 LRPGRLDRKIEFPYLRDRRERRLIFGTIASKMSLAPEADLDS--LIIRNDSLSGAVIAAI 386 Query: 543 CNEAALIAARTDETQITMQHFESA 614 EA L A R + I E A Sbjct: 387 MQEAGLRAVRKNRYVILQSDLEEA 410
>PEX6_YEAST (P33760) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAS8) Length = 1030 Score = 136 bits (343), Expect = 5e-32 Identities = 85/208 (40%), Positives = 119/208 (57%), Gaps = 7/208 (3%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L GPPGTGKTL+AKA A + F S+ G + + M++G + VR +FQ+AR+ P ++ Sbjct: 769 LFYGPPGTGKTLMAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQKAREAKPCVI 828 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTA-GVVVLAGTNRPDILDKA 362 F DEID++ SG +R ++QLL E+DG T A GV V+ TNRPD+LD+A Sbjct: 829 FFDEIDSVAPKRGNQGDSGGVMDR--IVSQLLAELDGMSTDADGVFVIGATNRPDLLDEA 886 Query: 363 LLRPGRFDRQITIDKPDIKGRD-QIFRIYLTKLKLDNEPTYFSQRLAALTP-GFAGADIA 536 LLRPGRFD+ + + PD + I K LDN+ LA L P + GAD Sbjct: 887 LLRPGRFDKLLYLGIPDTDTKQLNILEALTRKFVLDNDVKLI--ELAKLCPFNYTGADFY 944 Query: 537 NVCNEAALIA----ARTDETQITMQHFE 608 +C++A L A AR E +++ QH E Sbjct: 945 ALCSDAMLNAMSRIARMVEKKVS-QHNE 971
>TBP7_YEAST (P40340) TAT-binding homolog 7| Length = 1379 Score = 136 bits (343), Expect = 5e-32 Identities = 82/210 (39%), Positives = 114/210 (54%), Gaps = 5/210 (2%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAG-----ESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQC 170 L GPPGTGKTL+A+A A E + F G+D + +VG ++R LF+EA++ Sbjct: 451 LFHGPPGTGKTLMARALAASCSSDERKITFFMRKGADILSKWVGEAERQLRLLFEEAKKH 510 Query: 171 APSIVFIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDI 350 PSI+F DEID + S S ++ LL MDG V+V+ TNRPD Sbjct: 511 QPSIIFFDEIDGLAPVRS----SKQEQIHASIVSTLLALMDGMDNRGQVIVIGATNRPDA 566 Query: 351 LDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGAD 530 +D AL RPGRFDR+ PD+K R +I +I K T F +LA LT G+ GAD Sbjct: 567 VDPALRRPGRFDREFYFPLPDVKARFKILQIQTRKWS-SPLSTNFIDKLAFLTKGYGGAD 625 Query: 531 IANVCNEAALIAARTDETQITMQHFESAID 620 + ++C EAALI+ + QI + + +D Sbjct: 626 LRSLCTEAALISIQRSFPQIYRSNDKLLVD 655
>NVL_HUMAN (O15381) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 856 Score = 135 bits (341), Expect = 8e-32 Identities = 81/227 (35%), Positives = 118/227 (51%), Gaps = 14/227 (6%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPG GKTLLAKA A ESG+ F+S+ G + + M+VG VR +FQ A+ AP ++ Sbjct: 619 LLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVI 678 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F DE+DA+ S +NQLL EMDG V ++A TNRPDI+D A+ Sbjct: 679 FFDEVDALCPRRSDRETGAS----VRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAI 734 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYL---TKLKLDNEPTYFSQRLAALTPGFAGADIA 536 LRPGR D+ + + P R I + TK LD + + + GAD++ Sbjct: 735 LRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLS 794 Query: 537 NVCNEAALIAARTD-----------ETQITMQHFESAIDRIIGGLEK 644 + EA++ A R + E +++ +HFE A ++ + K Sbjct: 795 ALVREASICALRQEMARQKSGNEKGELKVSHKHFEEAFKKVRSSISK 841 Score = 134 bits (336), Expect = 3e-31 Identities = 82/190 (43%), Positives = 106/190 (55%), Gaps = 3/190 (1%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPG GKTLLA A AGE +P + ++ + + G ++R LF++A AP I+ Sbjct: 302 LLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCII 361 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMD---GFGTTAGVVVLAGTNRPDILD 356 FIDEIDAI S D + QLL MD TA V+V+ TNRPD LD Sbjct: 362 FIDEIDAITPKREV----ASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLD 417 Query: 357 KALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIA 536 AL R GRFDR+I + PD R++I + KL+L + LA LTPGF GAD+ Sbjct: 418 PALRRAGRFDREICLGIPDEASRERILQTLCRKLRLPQ--AFDFCHLAHLTPGFVGADLM 475 Query: 537 NVCNEAALIA 566 +C EAA+ A Sbjct: 476 ALCREAAMCA 485
>CD48C_ARATH (Q9SS94) Cell division control protein 48 homolog C (AtCDC48c)| Length = 820 Score = 135 bits (339), Expect = 1e-31 Identities = 86/229 (37%), Positives = 118/229 (51%), Gaps = 16/229 (6%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPG GKTL+AKA A E+G FM I G++ + +VG +R LFQ AR CAP ++ Sbjct: 566 LLYGPPGCGKTLIAKAAANEAGANFMHIKGAELLNKYVGESELAIRTLFQRARTCAPCVI 625 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F DE+DA+ E LNQ LVE+DG G V V+ TNRPD++D A Sbjct: 626 FFDEVDALTTSRG----KEGAWVVERLLNQFLVELDG-GERRNVYVIGATNRPDVVDPAF 680 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALT-PGFAGADIANV 542 LRPGRF + + P+ R I + K +D P+ +A GF+GAD+A++ Sbjct: 681 LRPGRFGNLLYVPLPNADERASILKAIARKKPID--PSVDLDGIAKNNCEGFSGADLAHL 738 Query: 543 CNEAALIAAR-------------TDETQITM--QHFESAIDRIIGGLEK 644 +A A TD TQ T+ +HFE A+ + + K Sbjct: 739 VQKATFQAVEEMIGSSESSEDDVTDITQCTIKTRHFEQALSLVSPSVNK 787 Score = 131 bits (330), Expect = 1e-30 Identities = 84/192 (43%), Positives = 108/192 (56%), Gaps = 13/192 (6%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L GPPG GKT LA A A E+GVPF IS ++ + G +R LF +A + APSIV Sbjct: 271 LFHGPPGCGKTKLANAIANEAGVPFYKISATEVISGVSGASEENIRELFSKAYRTAPSIV 330 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERE---STLNQLLVEMDGFG---------TTAG-VVVL 326 FIDEIDAI N +RE + QLL MDG G ++AG V+V+ Sbjct: 331 FIDEIDAIGS-------KRENQQREMEKRIVTQLLTCMDGPGNKGDKNAPDSSAGFVLVI 383 Query: 327 AGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAAL 506 TNRPD LD AL R GRF+ +I + PD R +I + KL+L E + +R+A L Sbjct: 384 GATNRPDALDPALRRSGRFETEIALTAPDEDARAEILSVVAQKLRL--EGPFDKKRIARL 441 Query: 507 TPGFAGADIANV 542 TPGF GAD+ +V Sbjct: 442 TPGFVGADLESV 453
>PRS6B_ASPNG (P78578) 26S protease regulatory subunit 6B homolog| Length = 423 Score = 134 bits (338), Expect = 2e-31 Identities = 82/196 (41%), Positives = 115/196 (58%), Gaps = 1/196 (0%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKT+L KA A + F+ ++GS+F++ ++G GP VR++F+ AR+ +P+I+ Sbjct: 204 LLYGPPGTGKTMLVKAVANSTTASFIRVNGSEFVQKYLGEGPRMVRDVFRMARENSPAII 263 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDEIDAI +G++ E + L +LL +MDGF ++ V V+ TNR D LD AL Sbjct: 264 FIDEIDAIATKRFDAQ-TGADREVQRILLELLNQMDGFEQSSNVKVIMATNRADTLDPAL 322 Query: 366 LRPGRFDRQITIDK-PDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANV 542 LRPGR DR+I D + R IF +K+ L E S L +GA IA + Sbjct: 323 LRPGRLDRKIEFPSLRDRRERRLIFSTIASKMSLSPEVDLDS--LIVRNEPLSGAVIAAI 380 Query: 543 CNEAALIAARTDETQI 590 EA L A R + I Sbjct: 381 MQEAGLRAVRKNRYNI 396
>PEX6_MOUSE (Q99LC9) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 981 Score = 134 bits (337), Expect = 2e-31 Identities = 75/190 (39%), Positives = 109/190 (57%), Gaps = 1/190 (0%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTLLAKA A E + F+S+ G + + M+VG VR +F AR AP I+ Sbjct: 742 LLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCII 801 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F DE+D++ SG +R ++QLL E+DG +T V V+ TNRPD+LD AL Sbjct: 802 FFDELDSLAPSRGRSGDSGGVMDR--VVSQLLAELDGLHSTQDVFVIGATNRPDLLDPAL 859 Query: 366 LRPGRFDRQITID-KPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANV 542 LRPGRFD+ + + D + ++ K KL+ + + L P GAD+ ++ Sbjct: 860 LRPGRFDKLVFVGASEDRASQLRVLSAITRKFKLEASVS-LANVLDCCPPQLTGADLYSL 918 Query: 543 CNEAALIAAR 572 C++A + A + Sbjct: 919 CSDAMMTALK 928 Score = 47.4 bits (111), Expect = 4e-05 Identities = 28/112 (25%), Positives = 51/112 (45%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPG+GKT A G+ + + S ++++ F AR+C P+++ Sbjct: 468 LLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSRAVETKLQATFSRARRCRPAVL 527 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNR 341 + +D + G + +TL LL++ D ++V+A T+R Sbjct: 528 LLTAVDLLGRDRDGL---GEDARVAATLRHLLLDEDALSRCPPLMVVATTSR 576
>PEX6_RAT (P54777) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 978 Score = 134 bits (337), Expect = 2e-31 Identities = 75/190 (39%), Positives = 109/190 (57%), Gaps = 1/190 (0%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTLLAKA A E + F+S+ G + + M+VG VR +F AR AP I+ Sbjct: 739 LLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCII 798 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F DE+D++ SG +R ++QLL E+DG +T V V+ TNRPD+LD AL Sbjct: 799 FFDELDSLAPSRGRSGDSGGVMDR--VVSQLLAELDGLHSTQDVFVIGATNRPDLLDPAL 856 Query: 366 LRPGRFDRQITID-KPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANV 542 LRPGRFD+ + + D + ++ K KL+ + + L P GAD+ ++ Sbjct: 857 LRPGRFDKLVFVGASEDRASQLRVLSAITRKFKLEASVSLMNV-LDCCPPQLTGADLYSL 915 Query: 543 CNEAALIAAR 572 C++A + A + Sbjct: 916 CSDAMMTALK 925 Score = 45.4 bits (106), Expect = 1e-04 Identities = 28/112 (25%), Positives = 50/112 (44%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPG+GKT A G+ + + S ++++ F AR+C P ++ Sbjct: 467 LLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSRTVETKLQTTFSRARRCRPVVL 526 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNR 341 + +D + G + +TL LL++ D ++V+A T+R Sbjct: 527 LLTALDLLGRDRDGL---GEDARVVATLRHLLLDEDPLSRCPPLMVVATTSR 575
>PEX6_HUMAN (Q13608) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 980 Score = 132 bits (333), Expect = 7e-31 Identities = 75/190 (39%), Positives = 108/190 (56%), Gaps = 1/190 (0%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTLLAKA A E + F+S+ G + + M+VG VR +F AR AP I+ Sbjct: 741 LLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCII 800 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F DE+D++ SG +R ++QLL E+DG +T V V+ TNRPD+LD AL Sbjct: 801 FFDELDSLAPSRGRSGDSGGVMDR--VVSQLLAELDGLHSTQDVFVIGATNRPDLLDPAL 858 Query: 366 LRPGRFDRQITID-KPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANV 542 LRPGRFD+ + + D + ++ K KL+ + + L P GAD+ ++ Sbjct: 859 LRPGRFDKLVFVGANEDRASQLRVLSAITRKFKLEPSVSLVNV-LDCCPPQLTGADLYSL 917 Query: 543 CNEAALIAAR 572 C++A A + Sbjct: 918 CSDAMTAALK 927 Score = 48.5 bits (114), Expect = 2e-05 Identities = 28/112 (25%), Positives = 52/112 (46%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPG GKT + A G+ + + S G ++++ +F AR+C P+++ Sbjct: 467 LLRGPPGCGKTTVVAAACSHLGLHLLKVPCSSLCAESSGAVETKLQAIFSRARRCRPAVL 526 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNR 341 + +D + G + + L LL+ D + ++V+A T+R Sbjct: 527 LLTAVDLLGRDRDGL---GEDARVMAVLRHLLLNEDPLNSCPPLMVVATTSR 575
>PEX6_SCHPO (O13764) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 948 Score = 131 bits (330), Expect = 1e-30 Identities = 80/204 (39%), Positives = 119/204 (58%), Gaps = 6/204 (2%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTLLAKA A E + F+SI G + + M+VG + VRN+F++AR +P ++ Sbjct: 692 LLYGPPGTGKTLLAKAVATELSLEFVSIKGPELLNMYVGESEANVRNVFEKARNSSPCVI 751 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFG--TTAGVVVLAGTNRPDILDK 359 F DE+D+I SG+ +R ++QLL E+D V V+ TNRPD+LD Sbjct: 752 FFDELDSIAPHRGNSSDSGNVMDR--VVSQLLAELDSISKDNNKYVFVIGATNRPDLLDP 809 Query: 360 ALLRPGRFDR--QITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADI 533 +LLRPGRFD+ + I+K + + + + R KLD E ++ P F GAD+ Sbjct: 810 SLLRPGRFDKLVYLGINKSE-ESKASMLRALTKTFKLD-ETIDLNEIAKNCHPNFTGADM 867 Query: 534 ANVCNEAAL--IAARTDETQITMQ 599 +C++A L I +T+E + +Q Sbjct: 868 YALCSDAVLSAIKRKTNEIDLLIQ 891
>KATL1_RAT (Q5XIK7) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 488 Score = 131 bits (330), Expect = 1e-30 Identities = 82/199 (41%), Positives = 120/199 (60%), Gaps = 10/199 (5%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L+VGPPGTGKT+LAKA A E G F ++S S + G VR LF+ AR AP+ + Sbjct: 243 LMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTI 302 Query: 186 FIDEIDAIXXXXXXXXFSGSNDEREST---LNQLLVEMDGFG-------TTAGVVVLAGT 335 FIDEID+I G++DE E++ ++LL++MDG G + V+VLA T Sbjct: 303 FIDEIDSICSR------RGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAAT 356 Query: 336 NRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPG 515 N P +D+AL R R +++I I P KGR ++ +I L +++LD P + +A T G Sbjct: 357 NFPWDIDEALRR--RLEKRIYIPLPTAKGRAELLKISLREVELD--PDIHLEDIAEKTEG 412 Query: 516 FAGADIANVCNEAALIAAR 572 ++GADI N+C +A+L+A R Sbjct: 413 YSGADITNICRDASLMAMR 431
>KATL1_MOUSE (Q8K0T4) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 488 Score = 131 bits (329), Expect = 2e-30 Identities = 82/199 (41%), Positives = 120/199 (60%), Gaps = 10/199 (5%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L+VGPPGTGKT+LAKA A E G F ++S S + G VR LF+ AR AP+ + Sbjct: 243 LMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTI 302 Query: 186 FIDEIDAIXXXXXXXXFSGSNDEREST---LNQLLVEMDGFG-------TTAGVVVLAGT 335 FIDEID+I G++DE E++ ++LL++MDG G + V+VLA T Sbjct: 303 FIDEIDSICSR------RGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAAT 356 Query: 336 NRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPG 515 N P +D+AL R R +++I I P KGR ++ +I L +++LD P + +A T G Sbjct: 357 NFPWDIDEALRR--RLEKRIYIPLPTAKGRAELLKISLREVELD--PDVHLEDIADKTEG 412 Query: 516 FAGADIANVCNEAALIAAR 572 ++GADI N+C +A+L+A R Sbjct: 413 YSGADITNICRDASLMAMR 431
>PEX6_NEUCR (Q7SGP2) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1381 Score = 130 bits (327), Expect = 3e-30 Identities = 78/200 (39%), Positives = 108/200 (54%), Gaps = 5/200 (2%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L GPPGTGKTLLAKA A E + F S+ G + + M++G + VR +FQ AR P +V Sbjct: 1028 LFYGPPGTGKTLLAKAIATEYSLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPCVV 1087 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGF----GTTAGVVVLAGTNRPDIL 353 F DE+D++ SG +R ++QLL E+DG G GV V+ TNRPD+L Sbjct: 1088 FFDELDSVAPKRGNQGDSGGVMDR--IVSQLLAELDGMSGGEGGGGGVFVIGATNRPDLL 1145 Query: 354 DKALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTP-GFAGAD 530 D ALLRPGRFD+ + + D + LT+ K PT + +A P + GAD Sbjct: 1146 DPALLRPGRFDKMLYLGVSDTHDKQVTIMEALTR-KFTLHPTVSLRSVAERLPFTYTGAD 1204 Query: 531 IANVCNEAALIAARTDETQI 590 +C++A L A T + Sbjct: 1205 FYALCSDAMLKAVTRQATLV 1224
>PEX6_PENCH (Q9HG03) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1459 Score = 129 bits (324), Expect = 7e-30 Identities = 77/200 (38%), Positives = 108/200 (54%), Gaps = 5/200 (2%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L GPPGTGKTLLAKA A E + F S+ G + + M++G + VR +FQ AR P +V Sbjct: 1067 LFYGPPGTGKTLLAKAIATEFSLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPCVV 1126 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFG----TTAGVVVLAGTNRPDIL 353 F DE+D++ SG +R ++QLL E+DG + GV V+ TNRPD+L Sbjct: 1127 FFDELDSVAPKRGNQGDSGGVMDR--IVSQLLAELDGMNGGEENSGGVFVIGATNRPDLL 1184 Query: 354 DKALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTP-GFAGAD 530 D ALLRPGRFD+ + + D + LT+ K P R+A P + GAD Sbjct: 1185 DTALLRPGRFDKMLYLGVSDTHRKQATILEALTR-KFALHPDVSLDRVAEQLPLTYTGAD 1243 Query: 531 IANVCNEAALIAARTDETQI 590 + +C++A L A T + Sbjct: 1244 LYALCSDAMLKAITRKATAV 1263
>PEX6_ASHGO (Q74Z13) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1021 Score = 129 bits (324), Expect = 7e-30 Identities = 80/200 (40%), Positives = 109/200 (54%), Gaps = 8/200 (4%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L GPPGTGKTLLAKA A + F S+ G + + M++G + VR +FQ AR P ++ Sbjct: 760 LFYGPPGTGKTLLAKAVATNFSLNFFSVKGPELLNMYIGESEANVRRVFQRARDAKPCVI 819 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTA-GVVVLAGTNRPDILDKA 362 F DE+D++ SG +R ++QLL E+DG T G+ V+ TNRPD+LD+A Sbjct: 820 FFDELDSVAPKRGNQGDSGGVMDR--IVSQLLAELDGLSTGGDGLFVIGATNRPDLLDEA 877 Query: 363 LLRPGRFDRQITIDKPDIKGRD-QIFRIYLTKLKLDNEPTYFSQRLAALTP-GFAGADIA 536 LLRPGRFD+ + + D + I R K LD P LAA P + GAD Sbjct: 878 LLRPGRFDKLLYLGISDTNEKQANILRALTRKFTLD--PDVSLDDLAASCPFTYTGADFY 935 Query: 537 NVCNEAAL-----IAARTDE 581 +C++A L IA DE Sbjct: 936 ALCSDAMLNAMTRIAGNVDE 955
>PEX6_CANGA (Q6FW67) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1017 Score = 129 bits (324), Expect = 7e-30 Identities = 72/189 (38%), Positives = 109/189 (57%), Gaps = 2/189 (1%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L GPPGTGKTLLAKA A + F S+ G + + M++G + VR +FQ+AR P ++ Sbjct: 755 LFYGPPGTGKTLLAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVI 814 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTA-GVVVLAGTNRPDILDKA 362 F DE+D++ SG +R ++QLL E+DG + GV ++ TNRPD+LD+A Sbjct: 815 FFDEVDSVAPKRGNQGDSGGVMDR--IVSQLLAELDGMSSDGDGVFIIGATNRPDLLDEA 872 Query: 363 LLRPGRFDRQITIDKPDIKGRD-QIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIAN 539 LLRPGRFD+ I + D + + I R K K+ ++ F + ++ + GAD Sbjct: 873 LLRPGRFDKLIYLGIADTREKQANIMRALTRKFKVSSD-INFDELVSDFPFSYTGADFYA 931 Query: 540 VCNEAALIA 566 +C++A L A Sbjct: 932 LCSDAMLKA 940
>KATL1_HUMAN (Q9BW62) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 490 Score = 129 bits (323), Expect = 1e-29 Identities = 82/199 (41%), Positives = 119/199 (59%), Gaps = 10/199 (5%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L+VGPPGTGKT+LAKA A E G F ++S S + G VR LF+ AR AP+ + Sbjct: 245 LMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTI 304 Query: 186 FIDEIDAIXXXXXXXXFSGSNDEREST---LNQLLVEMDGFG-------TTAGVVVLAGT 335 FIDEID+I G++DE E++ ++LL++MDG G + V+VLA T Sbjct: 305 FIDEIDSICSR------RGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAAT 358 Query: 336 NRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPG 515 N P +D+AL R R +++I I P KGR ++ +I L +++LD P + +A G Sbjct: 359 NFPWDIDEALRR--RLEKRIYIPLPTAKGRAELLKINLREVELD--PDIQLEDIAEKIEG 414 Query: 516 FAGADIANVCNEAALIAAR 572 ++GADI NVC +A+L+A R Sbjct: 415 YSGADITNVCRDASLMAMR 433
>PR6AA_XENLA (O42587) 26S protease regulatory subunit 6A-A (TAT-binding protein| 6) (TBP-6) Length = 405 Score = 128 bits (322), Expect = 1e-29 Identities = 76/194 (39%), Positives = 110/194 (56%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L+ GPPGTGKTLLA+A A ++ F+ ++G ++MF+G G VR+ F A++ APSI+ Sbjct: 208 LMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSII 267 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDE+DAI +G E + T+ +LL ++DGF V V+A TNR DILD AL Sbjct: 268 FIDELDAIGTKRFDSEKAGDR-EVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPAL 326 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LR GR DR+I P+ + R +I +I+ K+ + + Y + LA Sbjct: 327 LRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNY--EELARCPTISMALSAKQFG 384 Query: 546 NEAALIAARTDETQ 587 EA +IA R T+ Sbjct: 385 VEAGMIALRRGATE 398
>PEX6_GLOLA (Q9C1E9) Peroxisomal biogenesis factor 6 (Peroxin-6) (ClaPEX6)| Length = 1388 Score = 127 bits (320), Expect = 2e-29 Identities = 76/192 (39%), Positives = 106/192 (55%), Gaps = 5/192 (2%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L GPPGTGKTLLAKA A E + F S+ G + + M++G + VR +FQ AR P +V Sbjct: 1031 LFYGPPGTGKTLLAKAIATEYSLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPCVV 1090 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFG----TTAGVVVLAGTNRPDIL 353 F DE+D++ SG +R ++QLL E+DG T+ GV V+ TNRPD+L Sbjct: 1091 FFDELDSVAPKRGNQGDSGGVMDR--IVSQLLAELDGMSGGDDTSGGVFVIGATNRPDLL 1148 Query: 354 DKALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTP-GFAGAD 530 D ALLRPGRFD+ + + D + LT+ K P+ +A P + GAD Sbjct: 1149 DPALLRPGRFDKMLYLGVSDTHDKQLKILEALTR-KFTLHPSVSLHSVAQQLPFTYTGAD 1207 Query: 531 IANVCNEAALIA 566 +C++A L A Sbjct: 1208 FYALCSDAMLKA 1219
>PEX6_YARLI (P36966) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAY4) Length = 1024 Score = 127 bits (319), Expect = 3e-29 Identities = 77/192 (40%), Positives = 106/192 (55%), Gaps = 5/192 (2%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L GPPGTGKTLLAKA A + F S+ G + + M++G + VR +FQ+AR P +V Sbjct: 756 LFYGPPGTGKTLLAKAIATTFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVV 815 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTA--GVVVLAGTNRPDILDK 359 F DE+D++ SG +R ++QLL E+DG T GV V+ TNRPD+LD+ Sbjct: 816 FFDELDSVAPQRGNQGDSGGVMDR--IVSQLLAELDGMSTAGGEGVFVVGATNRPDLLDE 873 Query: 360 ALLRPGRFDRQITIDKPDIKGRDQIFRIYLT---KLKLDNEPTYFSQRLAALTPGFAGAD 530 ALLRPGRFD+ + + D + Q LT +L D S+R F GAD Sbjct: 874 ALLRPGRFDKMLYLGISDTHEKQQTIMEALTRKFRLAADVSLEAISKRCPFT---FTGAD 930 Query: 531 IANVCNEAALIA 566 +C++A L A Sbjct: 931 FYALCSDAMLNA 942
>KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) Length = 516 Score = 127 bits (319), Expect = 3e-29 Identities = 83/199 (41%), Positives = 120/199 (60%), Gaps = 10/199 (5%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L+VGPPGTGKT+LAKA A E G F ++S + + G VR LF+ AR APS + Sbjct: 271 LMVGPPGTGKTMLAKAVATECGTTFFNVSSASLTSKYHGESEKLVRLLFEMARFYAPSTI 330 Query: 186 FIDEIDAIXXXXXXXXFSGSNDEREST---LNQLLVEMDGF-GTTAG------VVVLAGT 335 FIDEID+I G+ E E++ ++LL++MDG G +AG V+VLA T Sbjct: 331 FIDEIDSICSK------RGTGSEHEASRRVKSELLIQMDGVSGPSAGEESSKMVMVLAAT 384 Query: 336 NRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPG 515 N P +D+AL R R +++I I P+I GR+Q+ RI L ++ L ++ S +A G Sbjct: 385 NFPWDIDEALRR--RLEKRIYIPLPEIDGREQLLRINLKEVPLADDIDLKS--IAEKMDG 440 Query: 516 FAGADIANVCNEAALIAAR 572 ++GADI NVC +A+++A R Sbjct: 441 YSGADITNVCRDASMMAMR 459
>KTNA1_HUMAN (O75449) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) Length = 491 Score = 127 bits (319), Expect = 3e-29 Identities = 83/199 (41%), Positives = 119/199 (59%), Gaps = 10/199 (5%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L+VGPPGTGKTLLAKA A E F ++S S + G VR LF+ AR +P+ + Sbjct: 246 LMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATI 305 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLN---QLLVEMDGFGTTAG-------VVVLAGT 335 FIDEID+I G+++E E++ +LLV+MDG G T+ V+VLA T Sbjct: 306 FIDEIDSICSR------RGTSEEHEASRRVKAELLVQMDGVGGTSENDDPSKMVMVLAAT 359 Query: 336 NRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPG 515 N P +D+AL R R +++I I P KGR+++ RI L +L+L ++ S +A G Sbjct: 360 NFPWDIDEALRR--RLEKRIYIPLPSAKGREELLRISLRELELADDVDLAS--IAENMEG 415 Query: 516 FAGADIANVCNEAALIAAR 572 ++GADI NVC +A+L+A R Sbjct: 416 YSGADITNVCRDASLMAMR 434
>PEX6_DEBHA (Q6BS73) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1198 Score = 126 bits (317), Expect = 5e-29 Identities = 76/194 (39%), Positives = 109/194 (56%), Gaps = 7/194 (3%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L GPPGTGKTLLAKA A + F S+ G + + M++G + VR +FQ+AR P ++ Sbjct: 876 LFYGPPGTGKTLLAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVI 935 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGF-----GTTAGVVVLAGTNRPDI 350 F DE+D++ SG +R ++QLL E+DG G GV V+ TNRPD+ Sbjct: 936 FFDELDSVAPKRGNQGDSGGVMDR--IVSQLLAELDGMSGGAEGGGDGVFVVGATNRPDL 993 Query: 351 LDKALLRPGRFDRQITIDKPDI-KGRDQIFRIYLTKLKL-DNEPTYFSQRLAALTPGFAG 524 LD+ALLRPGRFD+ + + D + + +I K KL DN Y + + T F G Sbjct: 994 LDEALLRPGRFDKMLYLGISDTDEKQSKILEALTRKFKLADNVDLYEIAKRCSFT--FTG 1051 Query: 525 ADIANVCNEAALIA 566 AD +C+++ L A Sbjct: 1052 ADFYALCSDSMLNA 1065
>KTNA1_XENLA (Q9PUL2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) (Fragment) Length = 486 Score = 126 bits (316), Expect = 6e-29 Identities = 83/199 (41%), Positives = 118/199 (59%), Gaps = 10/199 (5%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L+VGPPGTGKTLLAKA A E F +IS S + G VR LF+ AR AP+ + Sbjct: 243 LMVGPPGTGKTLLAKAVATECKTTFFNISSSTLTSKYRGESEKLVRLLFEMARFYAPTTI 302 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLN---QLLVEMDGFGTTAG-------VVVLAGT 335 FIDEID+I G+++E E++ +LLV+MDG G + V+VLA T Sbjct: 303 FIDEIDSICSR------RGTSEEHEASRRVKAELLVQMDGVGGASENEDPSKMVMVLAAT 356 Query: 336 NRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPG 515 N P +D+AL R R +++I I P KGR+++ RI L +L+L ++ + +A G Sbjct: 357 NFPWDIDEALRR--RLEKRIYIPLPSAKGREELLRINLKELELADDVNI--ECIAENMDG 412 Query: 516 FAGADIANVCNEAALIAAR 572 ++GADI NVC +A+L+A R Sbjct: 413 YSGADITNVCRDASLMAMR 431
>PEX6_PICAN (Q9UVU5) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1135 Score = 126 bits (316), Expect = 6e-29 Identities = 75/192 (39%), Positives = 109/192 (56%), Gaps = 5/192 (2%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L GPPGTGKTLLAKA A + F S+ G + + M++G + VR +FQ+AR P ++ Sbjct: 850 LFYGPPGTGKTLLAKAIATNFALNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVI 909 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTA---GVVVLAGTNRPDILD 356 F DE+D++ SG +R ++QLL E+DG GV V+ TNRPD+LD Sbjct: 910 FFDELDSVAPKRGNQGDSGGVMDR--IVSQLLAELDGMSGAEGGDGVFVVGATNRPDLLD 967 Query: 357 KALLRPGRFDRQITIDKPDIKGRD-QIFRIYLTKLKLDNEPTYFSQRLAALTP-GFAGAD 530 +ALLRPGRFD+ + + D + +I + K +LD P+ R+A P + GAD Sbjct: 968 EALLRPGRFDKMLYLGIADTHEKQAKIIQALTRKFQLD--PSVDLGRIAETCPFTYTGAD 1025 Query: 531 IANVCNEAALIA 566 +C++A L A Sbjct: 1026 FYALCSDAMLNA 1037
>ATAD2_PONPY (Q5RDX4) ATPase family AAA domain-containing protein 2| Length = 1091 Score = 126 bits (316), Expect = 6e-29 Identities = 79/200 (39%), Positives = 106/200 (53%), Gaps = 5/200 (2%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATA-----GESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQC 170 L GPPGTGKTL+A+A A G+ V F G+D + +VG ++R LF +A Q Sbjct: 295 LFYGPPGTGKTLVARALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQM 354 Query: 171 APSIVFIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDI 350 PSI+F DEID + S + S ++ LL MDG + +VV+ TNR D Sbjct: 355 RPSIIFFDEIDGLAPVRS----SRQDQIHSSIVSTLLALMDGLDSRGEIVVIGATNRLDA 410 Query: 351 LDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGAD 530 +D AL RPGRFDR+ PD + R +I +I+ T F + LA G+ GAD Sbjct: 411 IDPALRRPGRFDREFLFSLPDKEARKEILKIHTRDWNPKPLDT-FLEELAENCVGYRGAD 469 Query: 531 IANVCNEAALIAARTDETQI 590 I ++C EAAL A R QI Sbjct: 470 IKSICAEAALCALRRRYPQI 489
>ATAD2_HUMAN (Q6PL18) ATPase family AAA domain-containing protein 2| Length = 1390 Score = 126 bits (316), Expect = 6e-29 Identities = 79/200 (39%), Positives = 106/200 (53%), Gaps = 5/200 (2%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATA-----GESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQC 170 L GPPGTGKTL+A+A A G+ V F G+D + +VG ++R LF +A Q Sbjct: 464 LFYGPPGTGKTLVARALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQM 523 Query: 171 APSIVFIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDI 350 PSI+F DEID + S + S ++ LL MDG + +VV+ TNR D Sbjct: 524 RPSIIFFDEIDGLAPVRS----SRQDQIHSSIVSTLLALMDGLDSRGEIVVIGATNRLDS 579 Query: 351 LDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGAD 530 +D AL RPGRFDR+ PD + R +I +I+ T F + LA G+ GAD Sbjct: 580 IDPALRRPGRFDREFLFSLPDKEARKEILKIHTRDWNPKPLDT-FLEELAENCVGYCGAD 638 Query: 531 IANVCNEAALIAARTDETQI 590 I ++C EAAL A R QI Sbjct: 639 IKSICAEAALCALRRRYPQI 658
>KTNA1_RAT (Q6E0V2) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) Length = 491 Score = 125 bits (315), Expect = 8e-29 Identities = 82/199 (41%), Positives = 118/199 (59%), Gaps = 10/199 (5%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L+VGPPGTGKTLLAKA A E F ++S S + G VR LF+ AR +P+ + Sbjct: 246 LMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATI 305 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLN---QLLVEMDGFGTTAG-------VVVLAGT 335 FIDEID+I G+++E E++ +LLV+MDG G + V+VLA T Sbjct: 306 FIDEIDSICSR------RGTSEEHEASRRVKAELLVQMDGVGGASENDDPSKMVMVLAAT 359 Query: 336 NRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPG 515 N P +D+AL R R +++I I P KGR+++ RI L +L+L ++ S +A G Sbjct: 360 NFPWDIDEALRR--RLEKRIYIPLPSAKGREELLRISLRELELADDVNLAS--IAENMEG 415 Query: 516 FAGADIANVCNEAALIAAR 572 ++GADI NVC +A+L+A R Sbjct: 416 YSGADITNVCRDASLMAMR 434
>KTNA1_MOUSE (Q9WV86) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) (Lipotransin) Length = 491 Score = 125 bits (315), Expect = 8e-29 Identities = 82/199 (41%), Positives = 118/199 (59%), Gaps = 10/199 (5%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L+VGPPGTGKTLLAKA A E F ++S S + G VR LF+ AR +P+ + Sbjct: 246 LMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATI 305 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLN---QLLVEMDGFGTTAG-------VVVLAGT 335 FIDEID+I G+++E E++ +LLV+MDG G + V+VLA T Sbjct: 306 FIDEIDSICSR------RGTSEEHEASRRMKAELLVQMDGVGGASENDDPSKMVMVLAAT 359 Query: 336 NRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPG 515 N P +D+AL R R +++I I P KGR+++ RI L +L+L ++ S +A G Sbjct: 360 NFPWDIDEALRR--RLEKRIYIPLPSAKGREELLRISLRELELADDVNLAS--IAENMEG 415 Query: 516 FAGADIANVCNEAALIAAR 572 ++GADI NVC +A+L+A R Sbjct: 416 YSGADITNVCRDASLMAMR 434
>TBP7_CAEEL (P54816) TAT-binding homolog 7| Length = 1242 Score = 125 bits (313), Expect = 1e-28 Identities = 82/225 (36%), Positives = 112/225 (49%), Gaps = 21/225 (9%) Frame = +3 Query: 15 GPPGTGKTLLAKATAGE-----SGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPS 179 GPPGTGKTL+A+A A E + V F G+D + +VG ++R LF +A PS Sbjct: 432 GPPGTGKTLVARALANECRRGANKVAFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPS 491 Query: 180 IVFIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDK 359 I+F DEID + S + S ++ LL MDG VVV+ TNR D LD Sbjct: 492 IIFFDEIDGLAPVRS----SKQDQIHASIVSTLLALMDGLDGRGEVVVIGATNRLDTLDP 547 Query: 360 ALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIAN 539 AL RPGRFDR++ PD+ R QI I+ +K + + +A T G+ GAD+ Sbjct: 548 ALRRPGRFDRELRFSLPDLNARRQILDIHTSKWEENKPIPETLDAIAERTSGYCGADLKF 607 Query: 540 VCNEAALIAART----------------DETQITMQHFESAIDRI 626 +C EA LI R+ +IT +HF A+ RI Sbjct: 608 LCTEAVLIGLRSRYPHIYMCSERLKLDVATIKITSEHFGHAMRRI 652
>ATAD2_MOUSE (Q8CDM1) ATPase family AAA domain-containing protein 2| Length = 1040 Score = 125 bits (313), Expect = 1e-28 Identities = 78/200 (39%), Positives = 106/200 (53%), Gaps = 5/200 (2%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATA-----GESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQC 170 L GPPGTGKTL+A+A A G+ V F G+D + +VG ++R LF +A Q Sbjct: 119 LFYGPPGTGKTLVARALANECSRGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQM 178 Query: 171 APSIVFIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDI 350 P+I+F DEID + S + S ++ LL MDG + +VV+ TNR D Sbjct: 179 RPAIIFFDEIDGLAPVRS----SRQDQIHSSIVSTLLALMDGLDSRGEIVVIGATNRLDS 234 Query: 351 LDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGAD 530 +D AL RPGRFDR+ PD R +I +I+ T+ F + LA G+ GAD Sbjct: 235 IDPALRRPGRFDREFLFSLPDKNARKEILKIH-TRDWNPKPVDMFLEELAEHCVGYCGAD 293 Query: 531 IANVCNEAALIAARTDETQI 590 I ++C EAAL A R QI Sbjct: 294 IKSICAEAALCALRRRYPQI 313
>RIX7_YEAST (Q07844) Ribosome biogenesis ATPase RIX7| Length = 837 Score = 124 bits (312), Expect = 2e-28 Identities = 82/194 (42%), Positives = 105/194 (54%), Gaps = 5/194 (2%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPG GKT +A A AGE VPF+SIS + G ++R+LF EAR AP +V Sbjct: 243 LLHGPPGCGKTSIANALAGELQVPFISISAPSVVSGMSGESEKKIRDLFDEARSLAPCLV 302 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTL-NQLLVEMD--GFGTTAG--VVVLAGTNRPDI 350 F DEIDAI G+ E E + QLL MD T G V+++ TNRPD Sbjct: 303 FFDEIDAITPKRD----GGAQREMERRIVAQLLTSMDELTMEKTNGKPVIIIGATNRPDS 358 Query: 351 LDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGAD 530 LD AL R GRFDR+I ++ P+ R I + LK+D + +LA LTPGF GAD Sbjct: 359 LDAALRRAGRFDREICLNVPNEVSRLHILKKMSDNLKIDGAIDF--AKLAKLTPGFVGAD 416 Query: 531 IANVCNEAALIAAR 572 + + A A + Sbjct: 417 LKALVTAAGTCAIK 430 Score = 120 bits (302), Expect = 3e-27 Identities = 69/192 (35%), Positives = 105/192 (54%), Gaps = 3/192 (1%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPG GKTLLAKA A ES F+SI G + + +VG +R +F AR P ++ Sbjct: 571 LLWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGESERSIRQVFTRARASVPCVI 630 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F DE+DA+ S+ +N LL E+DG G+ V+ TNRPD++D A+ Sbjct: 631 FFDELDALVPRRDTSLSESSS----RVVNTLLTELDGLNDRRGIFVIGATNRPDMIDPAM 686 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTK---LKLDNEPTYFSQRLAALTPGFAGADIA 536 LRPGR D+ + I+ P+ + + I + LTK L ++ + F+GAD+A Sbjct: 687 LRPGRLDKSLFIELPNTEEKLDIIKT-LTKSHGTPLSSDVDFEEIIRNEKCNNFSGADLA 745 Query: 537 NVCNEAALIAAR 572 + E++++A + Sbjct: 746 ALVRESSVLALK 757
>PEX6_KLULA (Q6CPV1) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1000 Score = 124 bits (311), Expect = 2e-28 Identities = 75/200 (37%), Positives = 110/200 (55%), Gaps = 8/200 (4%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L GPPGTGKTLLAKA A + F S+ G + + M++G + VR +FQ+AR P ++ Sbjct: 739 LFYGPPGTGKTLLAKAIASNFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVI 798 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTA-GVVVLAGTNRPDILDKA 362 F DE+D++ SG +R ++QLL E+DG + GV V+ TNRPD+LD+A Sbjct: 799 FFDELDSVAPKRGNQGDSGGVMDR--IVSQLLAELDGMSSGGDGVFVIGATNRPDLLDEA 856 Query: 363 LLRPGRFDRQITIDKPDI-KGRDQIFRIYLTKLKLDNEPTYFSQRLAALTP-GFAGADIA 536 LLRPGRFD+ + + D K + I + K L++ +A P + GAD Sbjct: 857 LLRPGRFDKMLYLGISDTDKKQANIIKALTRKFTLESGIDILD--IAKKCPFNYTGADFY 914 Query: 537 NVCNEAAL-----IAARTDE 581 +C++A L +A DE Sbjct: 915 ALCSDALLNAMTRVAGEVDE 934
>PEX1_YEAST (P24004) Peroxisome biosynthesis protein PAS1 (Peroxin-1)| Length = 1043 Score = 122 bits (305), Expect = 1e-27 Identities = 70/192 (36%), Positives = 100/192 (52%), Gaps = 7/192 (3%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL G PG GKTLLA A A + G+ F+S+ G + + F+G +R LF+ A+ P I+ Sbjct: 735 LLYGYPGCGKTLLASAVAQQCGLNFISVKGPEILNKFIGASEQNIRELFERAQSVKPCIL 794 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F DE D+I S + +NQLL +MDG GV +LA T+RPD++D AL Sbjct: 795 FFDEFDSIAPKRG----HDSTGVTDRVVNQLLTQMDGAEGLDGVYILAATSRPDLIDSAL 850 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFS-------QRLAALTPGFAG 524 LRPGR D+ + + P R I + + D F+ + +A T GF+G Sbjct: 851 LRPGRLDKSVICNIPTESERLDILQAIVNSKDKDTGQKKFALEKNADLKLIAEKTAGFSG 910 Query: 525 ADIANVCNEAAL 560 AD+ +C A L Sbjct: 911 ADLQGLCYNAYL 922
>PEX1_PICPA (P46463) Peroxisome biosynthesis protein PAS1 (Peroxin-1)| Length = 1157 Score = 122 bits (305), Expect = 1e-27 Identities = 72/194 (37%), Positives = 100/194 (51%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL G PG GKTLLA A A + G+ F+SI G + + ++G VR LF+ A+ P I+ Sbjct: 837 LLYGYPGCGKTLLASAVAAQCGLNFISIKGPEILNKYIGPSEQSVRELFERAQAAKPCIL 896 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F DE D+I S + +NQ+L +MDG GV VLA T+RPD++D AL Sbjct: 897 FFDEFDSIAPKRG----HDSTGVTDRVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSAL 952 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGR D+ + D PD R I + + + S +A GF+GAD+ + Sbjct: 953 LRPGRLDKSVICDMPDFDDRLDILQSVTRNMNVSKSVNLSS--VAGECSGFSGADLQALA 1010 Query: 546 NEAALIAARTDETQ 587 A L A T+ Sbjct: 1011 YNAYLKAVHEKLTK 1024
>VPS4_SCHPO (Q09803) Suppressor protein of bem1/bed5 double mutants| Length = 432 Score = 121 bits (303), Expect = 2e-27 Identities = 78/206 (37%), Positives = 115/206 (55%), Gaps = 1/206 (0%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGK+ LAKA A E+G F SIS SD + ++G VR LF+ AR+ PSI+ Sbjct: 166 LLYGPPGTGKSYLAKAVATEAGSTFFSISSSDLVSKWMGESERLVRQLFEMAREQKPSII 225 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFG-TTAGVVVLAGTNRPDILDKA 362 FIDEID++ G ++ + LV+M+G G +GV+VL TN P LD A Sbjct: 226 FIDEIDSLCGSRS----EGESESSRRIKTEFLVQMNGVGKDESGVLVLGATNIPWTLDSA 281 Query: 363 LLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANV 542 + R RF+++I I P+ R ++F + + K+ + F + LA +T G++G+DI+ V Sbjct: 282 IRR--RFEKRIYIPLPNAHARARMFELNVGKIPSELTSQDFKE-LAKMTDGYSGSDISIV 338 Query: 543 CNEAALIAARTDETQITMQHFESAID 620 +A + R T HF+ D Sbjct: 339 VRDAIMEPVRRIH---TATHFKEVYD 361
>PEX1_HUMAN (O43933) Peroxisome biogenesis factor 1 (Peroxin-1) (Peroxisome| biogenesis disorder protein 1) Length = 1283 Score = 120 bits (302), Expect = 3e-27 Identities = 72/187 (38%), Positives = 103/187 (55%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTLLA A ES + F+S+ G + + ++G VR++F A+ P I+ Sbjct: 878 LLYGPPGTGKTLLAGVIARESRMNFISVKGPELLSKYIGASEQAVRDIFIRAQAAKPCIL 937 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F DE ++I +G D +NQLL ++DG GV VLA T+RPD++D AL Sbjct: 938 FFDEFESIAPRRGHDN-TGVTDR---VVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPAL 993 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LRPGR D+ + PD R +I + L L ++ Q +A++T F GAD+ + Sbjct: 994 LRPGRLDKCVYCPPPDQVSRLEILNVLSDSLPLADDVDL--QHVASVTDSFTGADLKALL 1051 Query: 546 NEAALIA 566 A L A Sbjct: 1052 YNAQLEA 1058 Score = 32.7 bits (73), Expect = 0.94 Identities = 52/203 (25%), Positives = 80/203 (39%), Gaps = 20/203 (9%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNL-------FQEAR 164 LL G G+GK+ LAKA E+ F + + R+ N+ F EA Sbjct: 596 LLTGGKGSGKSTLAKAICKEA---FDKLDAHVERVDCKALRGKRLENIQKTLEVAFSEAV 652 Query: 165 QCAPSIVFIDEIDAIXXXXXXXXFSGSNDERES-----TLNQLLVEMDGFGTTAGVVVLA 329 PS+V +D++D I S D +S LN ++ E G+ +V L Sbjct: 653 WMQPSVVLLDDLDLIAGLPAVPEHEHSPDAVQSQRLAHALNDMIKEFISMGS---LVALI 709 Query: 330 GTNRPDILDKALLRPGR----FDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFS--- 488 T++ LL + F I P+ + R +I + K KLD + F+ Sbjct: 710 ATSQSQQSLHPLLVSAQGVHIFQCVQHIQPPNQEQRCEIL-CNVIKNKLDCDINKFTDLD 768 Query: 489 -QRLAALTPGFAGADIANVCNEA 554 Q +A T GF D + + A Sbjct: 769 LQHVAKETGGFVARDFTVLVDRA 791
>PEX6_PICPA (P33289) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAS5) Length = 1165 Score = 120 bits (301), Expect = 3e-27 Identities = 72/191 (37%), Positives = 103/191 (53%), Gaps = 4/191 (2%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L GPPGTGKTLLAKA A + F S+ G + + M++G + VR +FQ AR P +V Sbjct: 856 LFYGPPGTGKTLLAKAIATNFALNFFSVKGPELLNMYIGESEANVRKVFQRARDAKPCVV 915 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFG---TTAGVVVLAGTNRPDILD 356 F DE+D++ S + ++QLL E+DG GV V+ TNRPD+LD Sbjct: 916 FFDELDSVAPKRGNQ--GDSEGVMDRIVSQLLAELDGMSGGDGGDGVFVVGATNRPDLLD 973 Query: 357 KALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTP-GFAGADI 533 +ALLRPGRFD+ + + D + L++ K P+ ++A P F GAD Sbjct: 974 EALLRPGRFDKMLYLGVSDTHEKQSKIMEALSR-KFHLHPSVDLDKVAESCPFTFTGADF 1032 Query: 534 ANVCNEAALIA 566 +C++A L A Sbjct: 1033 YALCSDAMLNA 1043 Score = 38.5 bits (88), Expect = 0.017 Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 3/140 (2%) Frame = +3 Query: 30 GKTLLAKATAGESGVPFMSISGSDFMEMFVG---VGPSRVRNLFQEARQCAPSIVFIDEI 200 GK+LL + A E GV + I G + + +G R + L + C P IVFI I Sbjct: 575 GKSLLVHSLALECGVHLVEIDGYEVLNPSSESKTIGTIRGK-LDRVVEGCTPLIVFIKHI 633 Query: 201 DAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGR 380 +A+ +++S ++ +D + GV+ +A TN D L L + Sbjct: 634 EALTK-------KSEQQQKDSLAVKINELIDEYTAKPGVLFVASTNDSDNLSDEL--RAK 684 Query: 381 FDRQITIDKPDIKGRDQIFR 440 F +I + P + R IF+ Sbjct: 685 FKFEIVLGVPSEQERTLIFK 704
>YCF2_MESVI (Q9MUP8) Protein ycf2 (RF2)| Length = 890 Score = 119 bits (297), Expect = 1e-26 Identities = 77/233 (33%), Positives = 119/233 (51%), Gaps = 26/233 (11%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L GPPGTGKTL+AKA + E+ P++ + GS F GV +RV +LF++ + +P I+ Sbjct: 382 LFAGPPGTGKTLMAKAMSYEAETPYLYVEGSQFRCREEGVANARVDDLFKQIQNISPCIL 441 Query: 186 FIDEIDAIX------------XXXXXXXFSGSN---DER--ESTLNQLLVEMDGFGTTAG 314 +IDEID+I GSN D++ ++ L Q L+ MDG+ Sbjct: 442 YIDEIDSIAERREEANKQLEQLKTIGDSIEGSNINIDQKPSDTVLMQFLIYMDGYKKRND 501 Query: 315 VVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKL---DNEPTYF 485 ++++ TNR + LD A++RPGRFDRQI P + R I RI+L K D T Sbjct: 502 LIIIGATNRIETLDDAIMRPGRFDRQIVFSPPFFEERKDILRIFLRNTKALVDDTTKTMM 561 Query: 486 SQRLAALTPGFAGADIANVCNEAALIAARTDETQ------ITMQHFESAIDRI 626 ++R + G G D+ + + L++A Q I F+ A++R+ Sbjct: 562 AER----SIGLNGCDLRLLADNILLLSALESRNQQKTIPVINEDTFDRALERV 610
>MEI1_CAEEL (P34808) Meiotic spindle formation protein mei-1 (EC 3.6.4.3)| (Katanin ATPase-containing subunit) Length = 472 Score = 118 bits (295), Expect = 2e-26 Identities = 78/197 (39%), Positives = 109/197 (55%), Gaps = 3/197 (1%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 +L GPPGTGKTL+A+A A ES F ++S +D + G VR LF+ AR APSI+ Sbjct: 230 VLAGPPGTGKTLIARAIASESSSTFFTVSSTDLSSKWRGDSEKIVRLLFELARFYAPSII 289 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGT---TAGVVVLAGTNRPDILD 356 FIDEID + SG ++ ++ LV+MDG + V VLA TN P LD Sbjct: 290 FIDEIDTLGGQRGN---SGEHEASRRVKSEFLVQMDGSQNKFDSRRVFVLAATNIPWELD 346 Query: 357 KALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIA 536 +AL R RF+++I I PDI R ++ + +E Y LAA T GF+GAD+ Sbjct: 347 EALRR--RFEKRIFIPLPDIDARKKLIEKSMEGTPKSDEINY--DDLAARTEGFSGADVV 402 Query: 537 NVCNEAALIAARTDETQ 587 ++C AA+ R +T+ Sbjct: 403 SLCRTAAINVLRRYDTK 419
>VPS4_YEAST (P52917) Vacuolar protein sorting-associated protein VPS4 (END13| protein) (DOA4-independent degradation protein 6) Length = 437 Score = 117 bits (294), Expect = 2e-26 Identities = 76/188 (40%), Positives = 107/188 (56%), Gaps = 3/188 (1%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGK+ LAKA A E+ F S+S SD + ++G V+ LF AR+ PSI+ Sbjct: 170 LLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQLFAMARENKPSII 229 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGT-TAGVVVLAGTNRPDILDKA 362 FIDE+DA+ G ++ +LLV+M+G G + GV+VL TN P LD A Sbjct: 230 FIDEVDALTGTRG----EGESEASRRIKTELLVQMNGVGNDSQGVLVLGATNIPWQLDSA 285 Query: 363 LLRPGRFDRQITIDKPDIKGRDQIFRIYL--TKLKLDNEPTYFSQRLAALTPGFAGADIA 536 + R RF+R+I I PD+ R +F I + T L E + L A+T G++G+DIA Sbjct: 286 IRR--RFERRIYIPLPDLAARTTMFEINVGDTPCVLTKED---YRTLGAMTEGYSGSDIA 340 Query: 537 NVCNEAAL 560 V +A + Sbjct: 341 VVVKDALM 348
>VPS4B_MOUSE (P46467) Vacuolar sorting protein 4b (SKD1 protein)| Length = 444 Score = 115 bits (287), Expect = 1e-25 Identities = 78/196 (39%), Positives = 108/196 (55%), Gaps = 7/196 (3%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESG-VPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSI 182 LL GPPGTGK+ LAKA A E+ F SIS SD + ++G V+NLFQ AR+ PSI Sbjct: 171 LLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSI 230 Query: 183 VFIDEIDAIXXXXXXXXFSGSNDERESTL-----NQLLVEMDGFGT-TAGVVVLAGTNRP 344 +FIDEID++ GS E ES + LV+M G G G++VL TN P Sbjct: 231 IFIDEIDSL---------CGSRSENESEAARRIKTEFLVQMQGVGVDNDGILVLGATNIP 281 Query: 345 DILDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAG 524 +LD A+ R RF+++I I P+ R +FR++L + F Q L T G++G Sbjct: 282 WVLDSAIRR--RFEKRIYIPLPEAHARAAMFRLHLGSTQNSLTEADF-QELGRKTDGYSG 338 Query: 525 ADIANVCNEAALIAAR 572 ADI+ + +A + R Sbjct: 339 ADISIIVRDALMQPVR 354
>SEC18_CANAL (P34732) Vesicular-fusion protein SEC18| Length = 794 Score = 114 bits (284), Expect = 3e-25 Identities = 71/196 (36%), Positives = 105/196 (53%), Gaps = 13/196 (6%) Frame = +3 Query: 6 LLVGPPGTGKTLLA-KATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEAR------ 164 LL GPPGTGKTL+A K + +G ++G + + +VG +RNLF++A Sbjct: 314 LLYGPPGTGKTLIARKLSKMLNGKEPKIVNGPEMLSKYVGASEENIRNLFKDAEAEYKLK 373 Query: 165 --QCAPSIVFIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTN 338 ++ DE+D++ G+ ++ +NQLL +MDG ++V+ TN Sbjct: 374 GEDSDLHVIIFDELDSVFKQRGSGKSDGTG-VGDNVVNQLLSKMDGVDQLNNILVIGMTN 432 Query: 339 RPDILDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLK----LDNEPTYFSQRLAAL 506 R D++D ALLRPGRF+ QI I PD KGR IF I+ KL L ++ + L+ L Sbjct: 433 RLDLIDTALLRPGRFEIQIEISLPDEKGRKDIFLIHTKKLTENGILSSDVNF--DELSTL 490 Query: 507 TPGFAGADIANVCNEA 554 T F GA+I +CN A Sbjct: 491 TKNFTGAEIEGLCNSA 506 Score = 42.0 bits (97), Expect = 0.002 Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 4/72 (5%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSR----VRNLFQEARQCA 173 LL GPPG GKT +A A S PF+ + + E VG+G R + N+F++ + Sbjct: 597 LLYGPPGVGKTSIATTLALNSDFPFIKMLSA---ETLVGMGELRKIQEIDNVFRDVHKSP 653 Query: 174 PSIVFIDEIDAI 209 +++ ID+I+ I Sbjct: 654 LNVLVIDKIENI 665
>KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) (Atp60) (CAD ATPase) (Katanin 1) (BOTERO1 protein) (ECTOPIC ROOT HAIR 3 protein) (FAT ROOT protein) (FRAGILE FIBER 2 protein) (AtAAA1) Length = 523 Score = 114 bits (284), Expect = 3e-25 Identities = 73/197 (37%), Positives = 108/197 (54%), Gaps = 8/197 (4%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L+ GPPGTGKTLLAKA A E G F ++S + + G VR LF AR APS + Sbjct: 276 LMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTI 335 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAG--------VVVLAGTNR 341 FIDEID++ SG ++ ++LLV++DG TA V+VLA TN Sbjct: 336 FIDEIDSLCNSRGG---SGEHESSRRVKSELLVQVDGVSNTATNEDGSRKIVMVLAATNF 392 Query: 342 PDILDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFA 521 P +D+AL R R +++I I PD + R + I L +++ ++ + +A T G++ Sbjct: 393 PWDIDEALRR--RLEKRIYIPLPDFESRKALININLRTVEVASDVNI--EDVARRTEGYS 448 Query: 522 GADIANVCNEAALIAAR 572 G D+ NVC +A++ R Sbjct: 449 GDDLTNVCRDASMNGMR 465
>VPS4A_MOUSE (Q8VEJ9) Vacuolar sorting protein 4a| Length = 437 Score = 113 bits (283), Expect = 4e-25 Identities = 77/196 (39%), Positives = 108/196 (55%), Gaps = 7/196 (3%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESG-VPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSI 182 LL GPPGTGK+ LAKA A E+ F S+S SD M ++G V+NLF+ ARQ PSI Sbjct: 164 LLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSI 223 Query: 183 VFIDEIDAIXXXXXXXXFSGSNDERESTL-----NQLLVEMDGFG-TTAGVVVLAGTNRP 344 +FIDE+D++ GS +E ES + LV+M G G G +VL TN P Sbjct: 224 IFIDEVDSL---------CGSRNENESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIP 274 Query: 345 DILDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAG 524 +LD A+ R RF+++I I P+ R Q+FR++L N LA T G++G Sbjct: 275 WVLDSAIRR--RFEKRIYIPLPEEAARAQMFRLHLGSTP-HNLTDANIHELARKTEGYSG 331 Query: 525 ADIANVCNEAALIAAR 572 ADI+ + ++ + R Sbjct: 332 ADISIIVRDSLMQPVR 347
>VPS4A_HUMAN (Q9UN37) Vacuolar sorting protein 4a (SKD2 protein) (hVPS4)| (VPS4-1) Length = 437 Score = 113 bits (283), Expect = 4e-25 Identities = 77/196 (39%), Positives = 108/196 (55%), Gaps = 7/196 (3%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESG-VPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSI 182 LL GPPGTGK+ LAKA A E+ F S+S SD M ++G V+NLF+ ARQ PSI Sbjct: 164 LLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSI 223 Query: 183 VFIDEIDAIXXXXXXXXFSGSNDERESTL-----NQLLVEMDGFG-TTAGVVVLAGTNRP 344 +FIDE+D++ GS +E ES + LV+M G G G +VL TN P Sbjct: 224 IFIDEVDSL---------CGSRNENESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIP 274 Query: 345 DILDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAG 524 +LD A+ R RF+++I I P+ R Q+FR++L N LA T G++G Sbjct: 275 WVLDSAIRR--RFEKRIYIPLPEEAARAQMFRLHLGSTP-HNLTDANIHELARKTEGYSG 331 Query: 525 ADIANVCNEAALIAAR 572 ADI+ + ++ + R Sbjct: 332 ADISIIVRDSLMQPVR 347
>PRS2_METTM (P42811) Putative 26S protease regulatory subunit homolog MTH1011| Length = 372 Score = 112 bits (281), Expect = 7e-25 Identities = 72/205 (35%), Positives = 104/205 (50%), Gaps = 1/205 (0%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L G PGTGKT+LAK+ A E VP I + + VG G ++ L++ A + APS++ Sbjct: 161 LFHGSPGTGKTMLAKSLANELRVPLYLIKATSLIGEHVGDGARQIHELYELASKTAPSVI 220 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDE+DAI G E +N LL EMDG GVV + TN P++LD A+ Sbjct: 221 FIDEMDAIGLDRRFQSLRGDVSE---VVNALLTEMDGINQNWGVVTIGATNNPELLDNAI 277 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 RF+ +I P R + Y+ + LD + + +L LT G +G DI Sbjct: 278 --RSRFEEEIEFKLPGDDERRMMLEKYIETMPLDVD--FSVDKLVKLTKGMSGRDIKERV 333 Query: 546 NEAALIAARTDET-QITMQHFESAI 617 + AL A DE+ ++ +H E A+ Sbjct: 334 LKTALHRALADESPRVEREHIEYAL 358
>PRS2_METJA (Q58889) Putative 26S protease regulatory subunit homolog MJ1494| Length = 371 Score = 112 bits (280), Expect = 9e-25 Identities = 73/210 (34%), Positives = 106/210 (50%), Gaps = 1/210 (0%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L GPPGTGKTL+A+A A E+ F+ + + + VG +R L+Q A + AP IV Sbjct: 158 LFYGPPGTGKTLMARALATETNSSFILVKAPELIGEHVGDASKMIRELYQRASESAPCIV 217 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDE+DAI G E +N LL E+DG GVV +A TN P +LD A+ Sbjct: 218 FIDELDAIGLSREYQSLRGDVSE---VVNALLTELDGIKENEGVVTIAATNNPAMLDPAI 274 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 RF+ +I P+ + R +I +Y K+ L + + T GF+G DI Sbjct: 275 --RSRFEEEIEFKLPNDEERLKIMELYAKKMPLPVKANL--KEFVEKTKGFSGRDIKEKF 330 Query: 546 NEAAL-IAARTDETQITMQHFESAIDRIIG 632 + AL A D ++ + E A+ +I+G Sbjct: 331 LKPALHRAILEDRDYVSKEDLEWALKKILG 360
>VPS4B_HUMAN (O75351) Vacuolar sorting protein 4b (SKD1 protein)| Length = 444 Score = 111 bits (277), Expect = 2e-24 Identities = 76/196 (38%), Positives = 108/196 (55%), Gaps = 7/196 (3%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESG-VPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSI 182 LL GPPGTGK+ LAKA A E+ F SIS SD + ++G V+NLFQ AR+ PSI Sbjct: 171 LLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSI 230 Query: 183 VFIDEIDAIXXXXXXXXFSGSNDERESTL-----NQLLVEMDGFGT-TAGVVVLAGTNRP 344 +FIDEID++ GS E ES + LV+M G G G++VL TN P Sbjct: 231 IFIDEIDSL---------CGSRSENESEAARRIKTEFLVQMQGVGVDNDGILVLGATNIP 281 Query: 345 DILDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAG 524 +LD A+ R RF+++I I P+ R +F+++L + F + L T G++G Sbjct: 282 WVLDSAIRR--RFEKRIYIPLPEPHARAAMFKLHLGTTQNSLTEADF-RELGRKTDGYSG 338 Query: 525 ADIANVCNEAALIAAR 572 ADI+ + +A + R Sbjct: 339 ADISIIVRDALMQPVR 354
>SEC18_YEAST (P18759) Vesicular-fusion protein SEC18| Length = 758 Score = 111 bits (277), Expect = 2e-24 Identities = 71/199 (35%), Positives = 107/199 (53%), Gaps = 12/199 (6%) Frame = +3 Query: 6 LLVGPPGTGKTLLAK--ATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEAR----- 164 LL GPPGTGKTL+A+ T + P + ++G + + +VG +RNLF++A Sbjct: 278 LLYGPPGTGKTLIARKIGTMLNAKEPKI-VNGPEILSKYVGSSEENIRNLFKDAEAEYRA 336 Query: 165 ---QCAPSIVFIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGT 335 + + I+ DE+D++ ++ +NQLL +MDG ++V+ T Sbjct: 337 KGEESSLHIIIFDELDSVFKQRGSR--GDGTGVGDNVVNQLLAKMDGVDQLNNILVIGMT 394 Query: 336 NRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDN--EPTYFSQRLAALT 509 NR D++D ALLRPGRF+ Q+ I PD KGR QIF I K++ +N LAALT Sbjct: 395 NRKDLIDSALLRPGRFEVQVEIHLPDEKGRLQIFDIQTKKMRENNMMSDDVNLAELAALT 454 Query: 510 PGFAGADIANVCNEAALIA 566 F+GA+I + A+ A Sbjct: 455 KNFSGAEIEGLVKSASSFA 473 Score = 38.5 bits (88), Expect = 0.017 Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 1/69 (1%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMS-ISGSDFMEMFVGVGPSRVRNLFQEARQCAPSI 182 L+ GP G+GKT LA A +SG PF+ IS ++ M + + N F++A + +I Sbjct: 561 LIHGPAGSGKTALAAEIALKSGFPFIRLISPNELSGMSESAKIAYIDNTFRDAYKSPLNI 620 Query: 183 VFIDEIDAI 209 + ID ++ + Sbjct: 621 LVIDSLETL 629
>SPAST_HUMAN (Q9UBP0) Spastin| Length = 616 Score = 110 bits (275), Expect = 4e-24 Identities = 69/187 (36%), Positives = 102/187 (54%), Gaps = 2/187 (1%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPG GKT+LAKA A ES F +IS + +VG G VR LF AR+ PSI+ Sbjct: 379 LLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSII 438 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAG--VVVLAGTNRPDILDK 359 FIDE+D++ G +D + L+E DG + V+V+ TNRP LD+ Sbjct: 439 FIDEVDSLLCERR----EGEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDE 494 Query: 360 ALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIAN 539 A+LR RF +++ + P+ + R + + L K +Q LA +T G++G+D+ Sbjct: 495 AVLR--RFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQ-LARMTDGYSGSDLTA 551 Query: 540 VCNEAAL 560 + +AAL Sbjct: 552 LAKDAAL 558
>SPAST_MOUSE (Q9QYY8) Spastin| Length = 614 Score = 110 bits (275), Expect = 4e-24 Identities = 69/187 (36%), Positives = 102/187 (54%), Gaps = 2/187 (1%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPG GKT+LAKA A ES F +IS + +VG G VR LF AR+ PSI+ Sbjct: 377 LLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSII 436 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAG--VVVLAGTNRPDILDK 359 FIDE+D++ G +D + L+E DG + V+V+ TNRP LD+ Sbjct: 437 FIDEVDSLLCERR----EGEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDE 492 Query: 360 ALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIAN 539 A+LR RF +++ + P+ + R + + L K +Q LA +T G++G+D+ Sbjct: 493 AVLR--RFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQ-LARMTDGYSGSDLTA 549 Query: 540 VCNEAAL 560 + +AAL Sbjct: 550 LAKDAAL 556
>PRS2_METTH (O27092) Putative 26S protease regulatory subunit homolog MTH1011| Length = 372 Score = 109 bits (272), Expect = 8e-24 Identities = 73/215 (33%), Positives = 111/215 (51%), Gaps = 2/215 (0%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L G PGTGKT+LAK+ A E VP I + + VG G ++ L++ A + APS++ Sbjct: 161 LFHGSPGTGKTMLAKSLANELKVPLYLIKATSLIGEHVGDGARQIHELYELASKTAPSVI 220 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 FIDE+DAI G E +N LL EMDG GVV + TN P++LDKA+ Sbjct: 221 FIDEMDAIGLDRRYQSLRGDVSE---VVNALLTEMDGINQNWGVVTIGATNNPELLDKAI 277 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 RF+ +I PD + R + Y+ + L + + +L LT +G DI + Sbjct: 278 --RSRFEEEIEFKLPDDEERKLMLEKYIETMPL--KVDFPVDKLVKLTREMSGRDIKDRV 333 Query: 546 NEAALIAARTDETQ-ITMQHFESAI-DRIIGGLEK 644 + AL A ++++ + +H E A+ +R + G K Sbjct: 334 LKTALHRAIAEDSESVRAEHIEYALKERKVSGEPK 368
>NSF_CAEEL (Q94392) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 824 Score = 107 bits (267), Expect = 3e-23 Identities = 69/198 (34%), Positives = 109/198 (55%), Gaps = 15/198 (7%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKA-----TAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEA--- 161 LL GPPGTGKTL+A+ A E + ++G ++ +VG S VR LF +A Sbjct: 334 LLFGPPGTGKTLMARQIGKMLNAREPKI----VNGPQILDKYVGESESNVRKLFADAEEE 389 Query: 162 -RQCAPS----IVFIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVL 326 R+C + I+ DEIDAI +GS+ ++ +NQLL +MDG ++V+ Sbjct: 390 WRRCGANSGLHIIIFDEIDAICKQRGS--MAGSSSVHDTVVNQLLSKMDGVEQLNNILVI 447 Query: 327 AGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDN--EPTYFSQRLA 500 TNR D++D+ALLRPGR + Q+ + PD GR QI +I+ +++ N +P + ++ Sbjct: 448 GMTNRRDMIDEALLRPGRLEVQMEVSLPDETGRLQILKIHTARMREYNKMDPNVDLEDIS 507 Query: 501 ALTPGFAGADIANVCNEA 554 T F+GA++ + A Sbjct: 508 KRTKNFSGAELEGLVRAA 525 Score = 32.3 bits (72), Expect = 1.2 Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 1/69 (1%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMS-ISGSDFMEMFVGVGPSRVRNLFQEARQCAPSI 182 +L G TGKT LA A S PF+ IS D + ++ F++A++ S+ Sbjct: 617 VLAGAAKTGKTSLAAQMAKSSDFPFVKVISPEDTVGFSESAKCMALKKAFEDAKRSKLSV 676 Query: 183 VFIDEIDAI 209 + ID ++ + Sbjct: 677 LLIDNLERL 685
>NSF_ARATH (Q9M0Y8) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) Length = 742 Score = 107 bits (266), Expect = 4e-23 Identities = 78/231 (33%), Positives = 113/231 (48%), Gaps = 27/231 (11%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGE-SGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPS- 179 LL GPPGTGKTL+A+ +G ++G + + FVG VR+LF +A Q + Sbjct: 254 LLFGPPGTGKTLMARQIGKMLNGKDPKIVNGPEVLSKFVGETEKNVRDLFADAEQDQRTL 313 Query: 180 -------IVFIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTN 338 ++ DEIDAI +S +NQLL ++DG V+++ TN Sbjct: 314 GDASELHVIIFDEIDAICKSRGSTR--DGTGVHDSIVNQLLTKIDGVEALNNVLLIGMTN 371 Query: 339 RPDILDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFS-----QRLAA 503 R D+LD+ALLRPGR + Q+ I PD GR QI +I+ K+K E ++ Q LAA Sbjct: 372 RKDLLDEALLRPGRLEVQVEISLPDEAGRLQILQIHTNKMK---ENSFLGTDINLQELAA 428 Query: 504 LTPGFAGADIANVCNEAALIA-------------ARTDETQITMQHFESAI 617 T ++GA++ V A A + +ITM+ F AI Sbjct: 429 RTKNYSGAELEGVVKSATSYALNRQLSMDDLTKPVEEENIKITMEDFLHAI 479 Score = 38.1 bits (87), Expect = 0.022 Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 4/72 (5%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPS----RVRNLFQEARQCA 173 LL GP G+GKT LA +S P++ I ++ M +G+ S + +F++A + Sbjct: 534 LLEGPSGSGKTALAATIGIDSDFPYVKIVSAETM---IGLSESTKCAHIVKVFEDAYKSP 590 Query: 174 PSIVFIDEIDAI 209 SI+ +D+I+ + Sbjct: 591 MSIIILDDIERL 602
>MSP1_YEAST (P28737) Protein MSP1 (TAT-binding homolog 4)| Length = 362 Score = 105 bits (262), Expect = 1e-22 Identities = 71/190 (37%), Positives = 101/190 (53%), Gaps = 1/190 (0%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPG GKT+LAKA A ESG F+SI S M+ + G V +F A + P I+ Sbjct: 130 LLYGPPGCGKTMLAKALAKESGANFISIRMSSIMDKWYGESNKIVDAMFSLANKLQPCII 189 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLN-QLLVEMDGFGTTAGVVVLAGTNRPDILDKA 362 FIDEID+ S ++ E +TL + + DG V+++ TNR + +D A Sbjct: 190 FIDEIDSFLRER-----SSTDHEVTATLKAEFMTLWDGLLNNGRVMIIGATNRINDIDDA 244 Query: 363 LLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANV 542 LR R ++ + P R +I + L KLD E + Q +A T GF+G+D+ + Sbjct: 245 FLR--RLPKRFLVSLPGSDQRYKILSVLLKDTKLD-EDEFDLQLIADNTKGFSGSDLKEL 301 Query: 543 CNEAALIAAR 572 C EAAL AA+ Sbjct: 302 CREAALDAAK 311
>NSF1_DROME (P46461) Vesicular-fusion protein Nsf1 (N-ethylmaleimide-sensitive| fusion protein 1) (NEM-sensitive fusion protein 1) (dNsf-1) (Protein comatose) Length = 745 Score = 105 bits (262), Expect = 1e-22 Identities = 68/195 (34%), Positives = 112/195 (57%), Gaps = 12/195 (6%) Frame = +3 Query: 6 LLVGPPGTGKTLLAK--ATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEA----RQ 167 LL GPPGTGKTL+A+ T + P + ++G ++ +VG + VR LF EA ++ Sbjct: 257 LLYGPPGTGKTLMARQIGTMLNAREPKI-VNGPQILDKYVGESEANVRRLFAEAEEEEKR 315 Query: 168 CAPS----IVFIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGT 335 P+ I+ DEIDAI +G++ ++ +NQLL ++DG ++V+ T Sbjct: 316 LGPNSGLHIIIFDEIDAICKQRGSV--AGNSGVHDTVVNQLLTKIDGVDQLNNILVIGMT 373 Query: 336 NRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNE--PTYFSQRLAALT 509 NR D++D+ALLRPGR + Q+ I P+ +GR QI I+ +++ N+ ++ +AALT Sbjct: 374 NRRDMIDEALLRPGRLEVQMEISLPNEQGRVQILNIHTKRMREFNKINDDVDNKEIAALT 433 Query: 510 PGFAGADIANVCNEA 554 F+GA++ + A Sbjct: 434 KNFSGAELEGLVRAA 448 Score = 33.9 bits (76), Expect = 0.42 Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 1/69 (1%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSI-SGSDFMEMFVGVGPSRVRNLFQEARQCAPSI 182 L+ G P +GKT LA A S PF+ + S D + +R +F +A + S Sbjct: 540 LVAGAPNSGKTALAAQLAKMSDFPFVKVCSPEDMVGYTESAKCLHIRKIFDDAYRSMLSC 599 Query: 183 VFIDEIDAI 209 + +D ++ + Sbjct: 600 IVVDNVERL 608
>SEC18_SCHPO (Q9P7Q4) Vesicular-fusion protein SEC18 homolog| Length = 792 Score = 105 bits (261), Expect = 1e-22 Identities = 69/202 (34%), Positives = 104/202 (51%), Gaps = 15/202 (7%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKA-----TAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEAR-- 164 LL GPPGTGKTL+A+ A E + ++G + + +VG VR LF +A Sbjct: 308 LLYGPPGTGKTLIARQIGKMLNAREPKI----VNGPEILNKYVGQSEENVRKLFADAERE 363 Query: 165 ------QCAPSIVFIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVL 326 + I+ DE+DAI G + +NQLL +MDG ++V+ Sbjct: 364 YRDRGEESGLHIIIFDELDAICKKRGSS--GGDTGVGDQVVNQLLAKMDGVDQLNNILVI 421 Query: 327 AGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDN--EPTYFSQRLA 500 TNR D++D+ALLRPGR + + I PD GR QI +I+ +++ + E + LA Sbjct: 422 GMTNRKDMIDEALLRPGRLEVHMEISLPDEHGRLQILKIHTSRMASNGILENDVDMEELA 481 Query: 501 ALTPGFAGADIANVCNEAALIA 566 +LT F+GA+IA + A+ A Sbjct: 482 SLTKNFSGAEIAGLIKSASSFA 503 Score = 38.5 bits (88), Expect = 0.017 Identities = 53/214 (24%), Positives = 90/214 (42%), Gaps = 6/214 (2%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMS-ISGSDFMEMFVGVGPSRVRNLFQEARQCAPSI 182 LL GP +GKT LA A S PF+ +S + M + V +F+++ + S+ Sbjct: 589 LLSGPIASGKTALAATIALGSEFPFVKLVSAESMVGMNENARVAHVNRVFEDSYKSPLSV 648 Query: 183 VFIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAG--VVVLAGTNRPDILD 356 + +DEI+ I + +TL Q L+ + G +++LA T+ +L Sbjct: 649 IVVDEIERI------IDWVPIGPRFSNTLLQTLMVLFKKQPPKGHRLLILATTSERTMLS 702 Query: 357 KALLRPGRFDRQITIDKPDIKGRDQIFRIY--LTKLKLDNEPTYFSQRLAALTPGFAGAD 530 + + FD +I + P++ ++ RI + N QRL F G D Sbjct: 703 RMDMTQS-FDAEIAV--PNVSNVTELDRIIQSIDSFADSNVRADTLQRL----QNFTGTD 755 Query: 531 IANVCNEAALIAARTDETQI-TMQHFESAIDRII 629 NV L+ A T + + + F A+ R I Sbjct: 756 AVNVGVAKILMIAETAKQDVDVVSCFVEAMARAI 789
>Y2139_MYCBO (P63346) Putative AAA-family ATPase Mb2139c| Length = 609 Score = 104 bits (260), Expect = 2e-22 Identities = 64/169 (37%), Positives = 91/169 (53%), Gaps = 19/169 (11%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAG---------------ESGVPFMSISGSDFMEMFVGVGPSRV 140 LL GPPG GKTL+AKA A E+ F++I G + + FVG + Sbjct: 290 LLYGPPGCGKTLIAKAVANSLAKKMAEVRGDDAHEAKSYFLNIKGPELLNKFVGETERHI 349 Query: 141 RNLFQEARQCA----PSIVFIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTT 308 R +FQ AR+ A P IVF DE+D+I S+D + + QLL E+DG Sbjct: 350 RLIFQRAREKASEGTPVIVFFDEMDSIFRTRGTGV---SSDVETTVVPQLLSEIDGVEGL 406 Query: 309 AGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLTK 455 V+V+ +NR D++D A+LRPGR D +I I++PD + I+ YLT+ Sbjct: 407 ENVIVIGASNREDMIDPAILRPGRLDVKIKIERPDAEAAQDIYSKYLTE 455
>Y2115_MYCTU (P63345) Putative AAA-family ATPase Rv2115c/MT2175| Length = 609 Score = 104 bits (260), Expect = 2e-22 Identities = 64/169 (37%), Positives = 91/169 (53%), Gaps = 19/169 (11%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAG---------------ESGVPFMSISGSDFMEMFVGVGPSRV 140 LL GPPG GKTL+AKA A E+ F++I G + + FVG + Sbjct: 290 LLYGPPGCGKTLIAKAVANSLAKKMAEVRGDDAHEAKSYFLNIKGPELLNKFVGETERHI 349 Query: 141 RNLFQEARQCA----PSIVFIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTT 308 R +FQ AR+ A P IVF DE+D+I S+D + + QLL E+DG Sbjct: 350 RLIFQRAREKASEGTPVIVFFDEMDSIFRTRGTGV---SSDVETTVVPQLLSEIDGVEGL 406 Query: 309 AGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLTK 455 V+V+ +NR D++D A+LRPGR D +I I++PD + I+ YLT+ Sbjct: 407 ENVIVIGASNREDMIDPAILRPGRLDVKIKIERPDAEAAQDIYSKYLTE 455
>Y1316_MYCLE (P46509) Putative AAA-family ATPase ML1316| Length = 609 Score = 104 bits (260), Expect = 2e-22 Identities = 64/169 (37%), Positives = 91/169 (53%), Gaps = 19/169 (11%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAG---------------ESGVPFMSISGSDFMEMFVGVGPSRV 140 LL GPPG GKTL+AKA A E+ F++I G + + FVG + Sbjct: 290 LLYGPPGCGKTLIAKAVANSLAKKMAEVRGDDAREAKSYFLNIKGPELLNKFVGETERHI 349 Query: 141 RNLFQEARQCA----PSIVFIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTT 308 R +FQ AR+ A P IVF DE+D+I S+D + + QLL E+DG Sbjct: 350 RLIFQRAREKASEGTPVIVFFDEMDSIFRTRGTGV---SSDVETTVVPQLLSEIDGVEGL 406 Query: 309 AGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLTK 455 V+V+ +NR D++D A+LRPGR D +I I++PD + I+ YLT+ Sbjct: 407 ENVIVIGASNREDMIDPAILRPGRLDVKIKIERPDAEAAQDIYSKYLTE 455
>ATAD1_RAT (Q505J9) ATPase family AAA domain-containing protein 1| Length = 361 Score = 103 bits (257), Expect = 4e-22 Identities = 67/192 (34%), Positives = 102/192 (53%), Gaps = 3/192 (1%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPG GKTL+AKATA E+G F+++ S + + G +F A + PSI+ Sbjct: 130 LLYGPPGCGKTLIAKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSII 189 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLN-QLLVEMDGFGT--TAGVVVLAGTNRPDILD 356 FIDEID+ S S+ E + + Q + DG T + V+V+ TNRP LD Sbjct: 190 FIDEIDSFLRNR-----SSSDHEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLD 244 Query: 357 KALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIA 536 A++R R + I++P +K R+ I ++ L +D +A T GF+G+D+ Sbjct: 245 SAIMR--RMPTRFHINQPALKQREAILKLILKNENVDRHVDLL--EVAQETDGFSGSDLK 300 Query: 537 NVCNEAALIAAR 572 +C +AAL+ R Sbjct: 301 EMCRDAALLCVR 312
>ATAD1_MOUSE (Q9D5T0) ATPase family AAA domain-containing protein 1| Length = 361 Score = 103 bits (257), Expect = 4e-22 Identities = 67/192 (34%), Positives = 102/192 (53%), Gaps = 3/192 (1%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPG GKTL+AKATA E+G F+++ S + + G +F A + PSI+ Sbjct: 130 LLYGPPGCGKTLIAKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSII 189 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLN-QLLVEMDGFGT--TAGVVVLAGTNRPDILD 356 FIDEID+ S S+ E + + Q + DG T + V+V+ TNRP LD Sbjct: 190 FIDEIDSFLRNR-----SSSDHEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLD 244 Query: 357 KALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIA 536 A++R R + I++P +K R+ I ++ L +D +A T GF+G+D+ Sbjct: 245 SAIMR--RMPTRFHINQPALKQREAILKLILKNENVDRHVDLL--EVAQETDGFSGSDLK 300 Query: 537 NVCNEAALIAAR 572 +C +AAL+ R Sbjct: 301 EMCRDAALLCVR 312
>ATAD1_HUMAN (Q8NBU5) ATPase family AAA domain-containing protein 1| Length = 361 Score = 103 bits (257), Expect = 4e-22 Identities = 67/192 (34%), Positives = 102/192 (53%), Gaps = 3/192 (1%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPG GKTL+AKATA E+G F+++ S + + G +F A + PSI+ Sbjct: 130 LLYGPPGCGKTLIAKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSII 189 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLN-QLLVEMDGFGT--TAGVVVLAGTNRPDILD 356 FIDEID+ S S+ E + + Q + DG T + V+V+ TNRP LD Sbjct: 190 FIDEIDSFLRNR-----SSSDHEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLD 244 Query: 357 KALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIA 536 A++R R + I++P +K R+ I ++ L +D +A T GF+G+D+ Sbjct: 245 SAIMR--RMPTRFHINQPALKQREAILKLILKNENVDRHVDLL--EVAQETDGFSGSDLK 300 Query: 537 NVCNEAALIAAR 572 +C +AAL+ R Sbjct: 301 EMCRDAALLCVR 312
>ATD1B_BRARE (Q503W7) ATPase family AAA domain-containing protein 1-B| Length = 362 Score = 102 bits (254), Expect = 1e-21 Identities = 66/192 (34%), Positives = 101/192 (52%), Gaps = 3/192 (1%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPG GKTL+AKATA E+G F+++ S + + G +F A + PSI+ Sbjct: 134 LLYGPPGCGKTLIAKATAKEAGFRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSII 193 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLN-QLLVEMDGFGT--TAGVVVLAGTNRPDILD 356 FIDEID+ S S+ E + + Q + DG T V+++ TNRP LD Sbjct: 194 FIDEIDSFLRNR-----SSSDHEATAMMKAQFMSLWDGLDTDYNCQVIIMGATNRPQDLD 248 Query: 357 KALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIA 536 A+LR R + I++P+++ R I ++ L + E +A T GF+G+D+ Sbjct: 249 SAILR--RMPTRFHINQPNVRQRKDILKLILENENV--ESAVELSEIAKQTDGFSGSDLR 304 Query: 537 NVCNEAALIAAR 572 +C +AAL+ R Sbjct: 305 EMCRDAALLCVR 316
>NSF2_DROME (P54351) Vesicular-fusion protein Nsf2 (N-ethylmaleimide-sensitive| fusion protein 2) (NEM-sensitive fusion protein 2) (dNsf-2) Length = 752 Score = 102 bits (253), Expect = 1e-21 Identities = 66/195 (33%), Positives = 110/195 (56%), Gaps = 12/195 (6%) Frame = +3 Query: 6 LLVGPPGTGKTLLAK--ATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEA----RQ 167 LL GPPGTGKTL+A+ T + P + ++G ++ +VG + +R LF EA ++ Sbjct: 262 LLYGPPGTGKTLMARQIGTMLNAREPKI-VNGPQILDKYVGESEANIRRLFAEAEEEEKR 320 Query: 168 CAPS----IVFIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGT 335 P+ I+ DEIDAI +G++ ++ +NQLL ++DG ++V+ T Sbjct: 321 LGPNSGLHIIIFDEIDAICKARGSV--AGNSGVHDTVVNQLLAKIDGVEQLNNILVIGMT 378 Query: 336 NRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNE--PTYFSQRLAALT 509 NR D++D+ALLRPGR + Q+ I P+ +GR QI I+ +++ N+ + +AA T Sbjct: 379 NRRDMIDEALLRPGRLEVQMEISLPNEQGRVQILNIHTKRMRDFNKIASDVDNNEIAAKT 438 Query: 510 PGFAGADIANVCNEA 554 F+GA++ + A Sbjct: 439 KNFSGAELEGLVRAA 453 Score = 32.3 bits (72), Expect = 1.2 Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPS-RVRNLFQEARQCAPSI 182 L+ G P +GK+ LA A S PF+ + + M F +R +F +A + S Sbjct: 545 LIEGAPNSGKSALAANLAQLSDFPFVKVCSPEDMVGFTESAKCLHIRKIFDDAYRSTLSC 604 Query: 183 VFIDEIDAI 209 + +D ++ + Sbjct: 605 IVVDNVERL 613
>TBP6_YEAST (P40328) Probable 26S protease subunit YTA6 (TAT-binding homolog 6)| Length = 754 Score = 100 bits (248), Expect = 5e-21 Identities = 64/197 (32%), Positives = 99/197 (50%), Gaps = 12/197 (6%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKT++AKA A ES F S+S S + ++G VR LF A++ +PSI+ Sbjct: 508 LLFGPPGTGKTMIAKAVATESNSTFFSVSASSLLSKYLGESEKLVRALFYMAKKLSPSII 567 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAG------------VVVLA 329 FIDEID++ N+ +LL++ + V+VL Sbjct: 568 FIDEIDSMLTARS----DNENESSRRIKTELLIQWSSLSSATAQSEDRNNTLDSRVLVLG 623 Query: 330 GTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALT 509 TN P +D A R RF R++ I PD + R + + K K + + + + +T Sbjct: 624 ATNLPWAIDDAARR--RFSRKLYIPLPDYETRLYHLKRLMAKQKNSLQDLDY-ELITEMT 680 Query: 510 PGFAGADIANVCNEAAL 560 GF+G+D+ ++ EAA+ Sbjct: 681 EGFSGSDLTSLAKEAAM 697
>NSF_MOUSE (P46460) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) (SKD2 protein) Length = 744 Score = 100 bits (248), Expect = 5e-21 Identities = 71/222 (31%), Positives = 111/222 (50%), Gaps = 20/222 (9%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKA-----TAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQ- 167 LL GPPG GKTLLA+ A E V ++G + + +VG + +R LF +A + Sbjct: 257 LLYGPPGCGKTLLARQIGKMLNAREPKV----VNGPEILNKYVGESEANIRKLFADAEEE 312 Query: 168 -------CAPSIVFIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVL 326 I+ DEIDAI +GS ++ +NQLL ++DG ++V+ Sbjct: 313 QRRLGANSGLHIIIFDEIDAICKQRGS--MAGSTGVHDTVVNQLLSKIDGVEQLNNILVI 370 Query: 327 AGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDN--EPTYFSQRLA 500 TNRPD++D+ALLRPGR + ++ I PD KGR QI I+ +++ + LA Sbjct: 371 GMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELA 430 Query: 501 ALTPGFAGADIANVCNEAALIAAR-----TDETQITMQHFES 611 T F+GA++ + A A + + ++ M+ ES Sbjct: 431 VETKNFSGAELEGLVRAAQSTAMNRHIKASTKVEVDMEKAES 472 Score = 40.8 bits (94), Expect = 0.003 Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 1/69 (1%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSR-VRNLFQEARQCAPSI 182 LL GPP +GKT +A A ES PF+ I D M F + ++ +F +A + S Sbjct: 540 LLEGPPHSGKTAVAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLSC 599 Query: 183 VFIDEIDAI 209 V +D+I+ + Sbjct: 600 VVVDDIERL 608
>NSF_HUMAN (P46459) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 744 Score = 100 bits (248), Expect = 5e-21 Identities = 71/222 (31%), Positives = 111/222 (50%), Gaps = 20/222 (9%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKA-----TAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQ- 167 LL GPPG GKTLLA+ A E V ++G + + +VG + +R LF +A + Sbjct: 257 LLYGPPGCGKTLLARQIGKMLNAREPKV----VNGPEILNKYVGESEANIRKLFADAEEE 312 Query: 168 -------CAPSIVFIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVL 326 I+ DEIDAI +GS ++ +NQLL ++DG ++V+ Sbjct: 313 QRRLGANSGLHIIIFDEIDAICKQRGS--MAGSTGVHDTVVNQLLSKIDGVEQLNNILVI 370 Query: 327 AGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDN--EPTYFSQRLA 500 TNRPD++D+ALLRPGR + ++ I PD KGR QI I+ +++ + LA Sbjct: 371 GMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELA 430 Query: 501 ALTPGFAGADIANVCNEAALIAAR-----TDETQITMQHFES 611 T F+GA++ + A A + + ++ M+ ES Sbjct: 431 VETKNFSGAELEGLVRAAQSTAMNRHIKASTKVEVDMEKAES 472 Score = 42.0 bits (97), Expect = 0.002 Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 1/69 (1%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSR-VRNLFQEARQCAPSI 182 LL GPP +GKT LA A ES PF+ I D M F + ++ +F +A + S Sbjct: 540 LLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLSC 599 Query: 183 VFIDEIDAI 209 V +D+I+ + Sbjct: 600 VVVDDIERL 608
>NSF_CRIGR (P18708) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 744 Score = 100 bits (248), Expect = 5e-21 Identities = 71/222 (31%), Positives = 111/222 (50%), Gaps = 20/222 (9%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKA-----TAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQ- 167 LL GPPG GKTLLA+ A E V ++G + + +VG + +R LF +A + Sbjct: 257 LLYGPPGCGKTLLARQIGKMLNAREPKV----VNGPEILNKYVGESEANIRKLFADAEEE 312 Query: 168 -------CAPSIVFIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVL 326 I+ DEIDAI +GS ++ +NQLL ++DG ++V+ Sbjct: 313 QRRLGANSGLHIIIFDEIDAICKQRGS--MAGSTGVHDTVVNQLLSKIDGVEQLNNILVI 370 Query: 327 AGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDN--EPTYFSQRLA 500 TNRPD++D+ALLRPGR + ++ I PD KGR QI I+ +++ + LA Sbjct: 371 GMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELA 430 Query: 501 ALTPGFAGADIANVCNEAALIAAR-----TDETQITMQHFES 611 T F+GA++ + A A + + ++ M+ ES Sbjct: 431 VETKNFSGAELEGLVRAAQSTAMNRHIKASTKVEVDMEKAES 472 Score = 42.0 bits (97), Expect = 0.002 Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 1/69 (1%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSR-VRNLFQEARQCAPSI 182 LL GPP +GKT LA A ES PF+ I D M F + ++ +F +A + S Sbjct: 540 LLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLSC 599 Query: 183 VFIDEIDAI 209 V +D+I+ + Sbjct: 600 VVVDDIERL 608
>YCF46_GUITH (O78439) Hypothetical 57.8 kDa protein ycf46| Length = 506 Score = 99.0 bits (245), Expect = 1e-20 Identities = 71/216 (32%), Positives = 109/216 (50%), Gaps = 8/216 (3%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LLVG GTGK+L AK+ A E +P + + +G +RVR + Q A +P I+ Sbjct: 279 LLVGIQGTGKSLTAKSIANEWNLPLLKLDVGRLFGGIIGESEARVRQMIQFAETISPCIL 338 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGT--------TAGVVVLAGTNR 341 +IDEID F+GSN +S + + FGT + V V+A N Sbjct: 339 WIDEIDK--------AFTGSNFNNDSGTTKRV-----FGTFITWLSEKKSPVFVVATANN 385 Query: 342 PDILDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFA 521 D L LLR GRFD I PD+K R+ IF+++L K++ + TY ++ L+A + F+ Sbjct: 386 IDSLPPELLRKGRFDEVFFIGLPDLKERECIFKVHLKKIRPKSWSTYDTEILSAQSNRFS 445 Query: 522 GADIANVCNEAALIAARTDETQITMQHFESAIDRII 629 GA+I EA IA + + T +++ R++ Sbjct: 446 GAEIEESIYEAMHIAF-NENREFTTSDILNSLKRVV 480
>SAP1_YEAST (P39955) Protein SAP1| Length = 897 Score = 96.3 bits (238), Expect = 7e-20 Identities = 69/205 (33%), Positives = 101/205 (49%), Gaps = 20/205 (9%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKT+LA+A A ES F SIS S ++G VR LF A++ +PSI+ Sbjct: 642 LLFGPPGTGKTMLARAVATESHSTFFSISASSLTSKYLGESEKLVRALFAIAKKLSPSII 701 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAG----------------- 314 F+DEID+I N+ N+ LV+ + A Sbjct: 702 FVDEIDSIMGSRNN---ENENESSRRIKNEFLVQWSSLSSAAAGSNKSNTNNSDTNGDED 758 Query: 315 ---VVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYF 485 V+VLA TN P +D+A R RF R+ I P+ + R F+ L+ K + F Sbjct: 759 DTRVLVLAATNLPWSIDEAARR--RFVRRQYIPLPEDQTRHVQFKKLLSHQKHTLTESDF 816 Query: 486 SQRLAALTPGFAGADIANVCNEAAL 560 + L +T G++G+DI ++ +AA+ Sbjct: 817 DE-LVKITEGYSGSDITSLAKDAAM 840
>MSP1_CAEEL (P54815) Protein MSP1 homolog| Length = 342 Score = 95.5 bits (236), Expect = 1e-19 Identities = 62/190 (32%), Positives = 96/190 (50%), Gaps = 1/190 (0%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPG GKTLLAKA A +G F+++ S+ + + G +F A++ P+I+ Sbjct: 121 LLYGPPGCGKTLLAKAVARAAGCRFINLQVSNLTDKWYGESQKLAAAVFSVAQKFQPTII 180 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAG-VVVLAGTNRPDILDKA 362 FIDEID+ S ++ Q + DGF ++ ++V+ TNRP +D A Sbjct: 181 FIDEIDSFLRDRQ----SHDHESTAMMKAQFMTLWDGFSSSGDQIIVMGATNRPRDVDAA 236 Query: 363 LLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANV 542 +LR R + + P+ K R QI + L K++N T +A G +G+D+ V Sbjct: 237 ILR--RMTARFQVPVPNAKQRSQILNVILRNEKINN--TVNLGEIAQAAEGLSGSDLKEV 292 Query: 543 CNEAALIAAR 572 C A L A+ Sbjct: 293 CRLALLARAK 302
>ATD1A_BRARE (Q7ZZ25) ATPase family AAA domain-containing protein 1-A| Length = 380 Score = 92.4 bits (228), Expect = 1e-18 Identities = 62/194 (31%), Positives = 100/194 (51%), Gaps = 5/194 (2%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPG GKTL+AKATA SG F+++ S + + G +F A + P I+ Sbjct: 133 LLYGPPGCGKTLIAKATAKASGCRFINLQASTLTDKWYGESQKLTAAVFSLAVKIQPCII 192 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTL---NQLLVEMDGF--GTTAGVVVLAGTNRPDI 350 F+DEID+ + S+ + E+T Q + DG G + V+V+ TNRP Sbjct: 193 FLDEIDSFLR-------NRSSMDHEATAMMKAQFMSLWDGLDTGENSQVMVMGATNRPQD 245 Query: 351 LDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGAD 530 +D A+LR R + P+ R++I R+ L+ L N + +A+ + G++G+D Sbjct: 246 VDAAILR--RMPTAFHVGLPNAAQREEILRLILSGENLSNAINL--KEIASQSEGYSGSD 301 Query: 531 IANVCNEAALIAAR 572 + +C +AA+ R Sbjct: 302 LKELCRDAAMYRVR 315
>YCF46_ODOSI (P49541) Hypothetical 56.9 kDa protein ycf46 (ORF497)| Length = 497 Score = 91.7 bits (226), Expect = 2e-18 Identities = 58/183 (31%), Positives = 95/183 (51%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL+G GTGK+L AKA A E +P + + VG SR+R + A +P I+ Sbjct: 263 LLIGIQGTGKSLTAKAIATEWQLPLLKLDVGRLFGGIVGESESRLRQMIDVAETLSPCIL 322 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 +IDE+D SG+++ +T L E T V V+A N D+L + Sbjct: 323 WIDEMDKAFSNNDSRGDSGTSNRVLATFISWLSEK-----TKPVFVVATANNVDLLPLEI 377 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 +R GRFD +D P+++ R +IF+I++ + + ++ + ++LA L+ F+GA+I Sbjct: 378 IRKGRFDEIFFLDLPELEERKEIFKIHIQEFRPNSWKLFDYKKLAQLSESFSGAEIRQSI 437 Query: 546 NEA 554 EA Sbjct: 438 IEA 440
>FTSH_CHLVU (P56369) Cell division protein ftsH homolog| Length = 1720 Score = 87.4 bits (215), Expect = 3e-17 Identities = 52/132 (39%), Positives = 77/132 (58%), Gaps = 2/132 (1%) Frame = +3 Query: 237 SGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDI 416 S N+++ S L+QLL+E+DG GVV+ TNRP++LD ALLRPGRFD+ + + P Sbjct: 1145 SKQNEKQVSLLSQLLIELDGIQGRNGVVIFGATNRPEVLDPALLRPGRFDKIVKVGLPAQ 1204 Query: 417 KGRDQIFRIYLTKLKLDNEP--TYFSQRLAALTPGFAGADIANVCNEAALIAARTDETQI 590 K R +I + Y L YF +R T GF AD+A + NE+AL A +++ Sbjct: 1205 KKRVEILQFYGQTLGYQKTMPWAYFGER----TVGFTAADLATLMNESAL-KAILNQSNH 1259 Query: 591 TMQHFESAIDRI 626 T++ E I+R+ Sbjct: 1260 TIETLEHGIERL 1271 Score = 72.8 bits (177), Expect = 8e-13 Identities = 39/68 (57%), Positives = 48/68 (70%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPGTGKTLL +A AGE+ VP + +SGS ME +++ +FQEARQ AP IV Sbjct: 1011 LLTGPPGTGKTLLVQALAGEAQVPVIVLSGSSLMEPGESAA-FKLQLVFQEARQLAPCIV 1069 Query: 186 FIDEIDAI 209 FIDEID + Sbjct: 1070 FIDEIDTL 1077
>YCF46_PORPU (P51189) Hypothetical 56.0 kDa protein ycf46 (ORF491)| Length = 491 Score = 85.9 bits (211), Expect = 9e-17 Identities = 62/208 (29%), Positives = 103/208 (49%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LLVG GTGK+L AKA A + +P + + VG SR+R + A +P ++ Sbjct: 263 LLVGIQGTGKSLTAKAIANDWTLPLLRLDIGKLFGGLVGESESRMREMVTIAEGLSPCVL 322 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 +IDEID SG++ T L E T V V+A N L + Sbjct: 323 WIDEIDKAFSNLYSQGDSGTSARVFGTFITWLSE-----KTTPVFVVATANTIQNLPSEM 377 Query: 366 LRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALTPGFAGADIANVC 545 LR GRFD +D P+ + R+ IF+I+L +++ + Y ++L+ L F+GA+I Sbjct: 378 LRKGRFDEIFFLDLPNNEERELIFQIHLARIRPKSWQNYNIKQLSLLCNKFSGAEIEQAI 437 Query: 546 NEAALIAARTDETQITMQHFESAIDRII 629 E ++ A ++E + + + + A+++ I Sbjct: 438 VE-SMHTAFSEEREFSTEDIKIALEQFI 464
>Y4KL_RHISN (P55530) Hypothetical 37.6 kDa AAA-family ATPase y4kL| Length = 330 Score = 82.4 bits (202), Expect = 1e-15 Identities = 64/199 (32%), Positives = 96/199 (48%), Gaps = 5/199 (2%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 L GPPG GKTL A+ A E G+P + + ++G + +R F+ AR+ P ++ Sbjct: 122 LFCGPPGCGKTLCAEIFAAELGLPLFRVKLDRLISSYLGETATNIRKTFEFARK-QPCVL 180 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 F DE DA+ SG ++E +N LL+ +D ++A TN LD A+ Sbjct: 181 FFDEFDALARTRDD---SGEHNELRRVVNSLLLFIDNMQPKG--FLIAATNLDRSLDAAI 235 Query: 366 LRPGRFDRQITIDKPD--IKGRDQIFRIYLTKLKLDNEPTYFS-QRLAALTPGFAGADIA 536 R RFD + D+P+ + GR KLK N P F R +A G++ A+I Sbjct: 236 WR--RFDEVLWFDRPEAAMIGR-------FLKLKFKNVPVAFDPARNSAALEGYSFAEIE 286 Query: 537 NVCNEA--ALIAARTDETQ 587 VC +A A+I R + Q Sbjct: 287 RVCTQAIKAMIIERRKQVQ 305
>AFG31_HUMAN (O43931) AFG3-like protein 1 (EC 3.4.24.-) (Fragment)| Length = 69 Score = 79.7 bits (195), Expect = 7e-15 Identities = 43/70 (61%), Positives = 52/70 (74%), Gaps = 3/70 (4%) Frame = +3 Query: 315 VVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLD---NEPTYF 485 VVVLAGTNRPD+LD AL+RPGRF RQI P IKGR IF+++L LKLD N+ T Sbjct: 1 VVVLAGTNRPDVLDPALMRPGRFHRQIYTGPPYIKGRSSIFKVHLRPLKLDKSLNKDT-L 59 Query: 486 SQRLAALTPG 515 +++LA LTPG Sbjct: 60 ARKLAVLTPG 69
>YCF2_ANTFO (Q859W7) Protein ycf2| Length = 2392 Score = 64.3 bits (155), Expect = 3e-10 Identities = 61/225 (27%), Positives = 103/225 (45%), Gaps = 19/225 (8%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFM--------EMFVGV---GPSRVRNLF 152 LLVGP GK+ L K A +S VP + IS S + E ++ + R+ + Sbjct: 1655 LLVGPTEIGKSYLIKNLAADSYVPLIKISISKLLYNKPDVITESWINILMESLQRLTLIL 1714 Query: 153 QEARQCAPSIVFIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGT------TAG 314 + A++ +P I++I +I + S N E + T L + + F T T G Sbjct: 1715 ELAKKMSPCIIWIQDIHELNVNR-----STENVESDPTF-LLGILLKYFHTEFISKSTKG 1768 Query: 315 VVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFRIYL--TKLKLDNEPTYFS 488 ++++ T+ P +D AL+ P R D+ + I DI R + F I L + N+ +F+ Sbjct: 1769 IIIIGSTHLPRKVDPALISPNRLDKLMNIRIIDIFERQEKFSILLHSKRFYFKNKLLHFN 1828 Query: 489 QRLAALTPGFAGADIANVCNEAALIAARTDETQITMQHFESAIDR 623 + A T G+ G D+ + NE +LI + I + A+ R Sbjct: 1829 E-FAYRTMGYNGRDLVALANEVSLINTTQGNSTIYIDAVRLALHR 1872
>ATD3A_HUMAN (Q9NVI7) ATPase family AAA domain-containing protein 3A| Length = 634 Score = 61.6 bits (148), Expect = 2e-09 Identities = 59/194 (30%), Positives = 89/194 (45%), Gaps = 15/194 (7%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPS-I 182 L+ GPPGTGKTL AK A SG+ + ++G D M G + + LF A + Sbjct: 397 LMYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPM-GREGVTAMHKLFDWANTSRRGLL 455 Query: 183 VFIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKA 362 +F+DE DA S ++ +TLN L G + ++VLA +N+P+ D A Sbjct: 456 LFVDEADAFLRKRATEKIS---EDLRATLNAFLYR-TGQHSNKFMLVLA-SNQPEQFDWA 510 Query: 363 LLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRL--------------A 500 + R + + D P + R+++ R+Y K L T QRL A Sbjct: 511 I--NDRINEMVHFDLPGQEERERLVRMYFDKYVL-KPATEGKQRLKLAQFDYGRKCSEVA 567 Query: 501 ALTPGFAGADIANV 542 LT G +G +IA + Sbjct: 568 RLTEGMSGREIAQL 581
>ATAD3_MOUSE (Q925I1) ATPase family AAA domain-containing protein 3 (AAA-ATPase| TOB3) Length = 591 Score = 60.5 bits (145), Expect = 4e-09 Identities = 60/211 (28%), Positives = 96/211 (45%), Gaps = 15/211 (7%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPS-I 182 L+ GPPGTGKTL AK A SG+ + ++G D M G + + +F A + Sbjct: 348 LMYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPM-GREGVTAMHKVFDWASTSRRGLL 406 Query: 183 VFIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKA 362 +F+DE DA S ++ +TLN L G ++ ++VLA +N+P+ D A Sbjct: 407 LFVDEADAFLRKRATEKIS---EDLRATLNAFL-HRTGQHSSKFMLVLA-SNQPEQFDWA 461 Query: 363 LLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRL--------------A 500 + R D + P + R+++ R+Y K L T QRL A Sbjct: 462 I--NDRIDEMVCFALPQREERERLVRMYFDKYVL-KPATEGKQRLKVAQFDYGKKCSEVA 518 Query: 501 ALTPGFAGADIANVCNEAALIAARTDETQIT 593 LT G +G +IA + +A +++ +T Sbjct: 519 QLTEGMSGREIAQLAVAWQAMAYSSEDGVLT 549
>YCF2_PINTH (P41653) Protein ycf2| Length = 2054 Score = 60.5 bits (145), Expect = 4e-09 Identities = 63/232 (27%), Positives = 99/232 (42%), Gaps = 20/232 (8%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDF----------------MEMFVGVGPSR 137 LL+GP GTG++ L K+ A +S VP + IS + FV Sbjct: 1374 LLIGPMGTGRSYLVKSLAADSYVPLIRISLKKLWYGEYLDYPLERIPTEFDPFVKDKMED 1433 Query: 138 VRNLFQEARQCAPSIVFIDEIDAIXXXXXXXXFSGSN--DERESTL-NQLLVEMDGF-GT 305 + A++ +P I++I I + G D S L N L DG + Sbjct: 1434 FHITLELAKRMSPCIIWIPNIHELNLNDATNYLFGFGFTDLFLSVLMNNLFRFRDGEKDS 1493 Query: 306 TAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYF 485 ++V+A T+ P +D AL+ P R DR I I I R + F I L L + F Sbjct: 1494 MRNILVIASTHIPQRVDPALIAPNRLDRSINIRMLVIPQRQREFPILLCSKGLYS--VKF 1551 Query: 486 SQRLAALTPGFAGADIANVCNEAALIAARTDETQITMQHFESAIDRIIGGLE 641 ++T +A D+A + +EA +++ +++ I SAI R I L+ Sbjct: 1552 PDEFGSITIDYAVRDLAALADEALILSITRNKSVIDTNTIRSAIYRQIFHLQ 1603
>YCF2_MARPO (P09975) Protein ycf2| Length = 2136 Score = 58.5 bits (140), Expect = 2e-08 Identities = 60/228 (26%), Positives = 100/228 (43%), Gaps = 17/228 (7%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFM--------EMFVGVGPSRVRNL---F 152 LL+GP TG++ L K A ES VP IS + + E ++ + +R L Sbjct: 1401 LLIGPIETGRSYLIKNLAAESYVPLFKISINKLLYNKPDVITESWMNILIESLRRLNLTL 1460 Query: 153 QEARQCAPSIVFIDEIDAIXXXXXXXXFSGSNDEREST-LNQLLVE--MDGFGTTA--GV 317 A++ +P I++I I + N E + T L +L++ F T + Sbjct: 1461 DFAKKMSPCIIWIQNIHQLNVNRLT-----QNVESDPTFLLGILLKYFQTDFSKTKKNNI 1515 Query: 318 VVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLD-NEPTYFSQR 494 +V+ T+ P +D AL+ P R D+ I + +I R + F + L K E +F Sbjct: 1516 IVIGSTHLPKKVDPALISPNRLDKIINVRLFNISQRKKQFPLLLKKKNFQLKENLFFLNE 1575 Query: 495 LAALTPGFAGADIANVCNEAALIAARTDETQITMQHFESAIDRIIGGL 638 + T G+ D++ + NE LI+ + + I + A R I GL Sbjct: 1576 FGSRTMGYNLRDLSALTNEVLLISITKNRSFIDTDTLKLAFHRQIFGL 1623
>ATD3B_HUMAN (Q5T9A4) ATPase family AAA domain-containing protein 3B| Length = 648 Score = 58.2 bits (139), Expect = 2e-08 Identities = 58/195 (29%), Positives = 88/195 (45%), Gaps = 16/195 (8%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPS-I 182 LL GPPGTGKTL AK A SG+ + ++G D M G + + LF A + Sbjct: 349 LLYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPM-GREGVTAMHKLFDWANTSRRGLL 407 Query: 183 VFIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKA 362 +F+DE DA S + +TLN L M G + ++VLA +N P+ D A Sbjct: 408 LFMDEADAFLRKRATEEIS---KDLRATLNAFLYHM-GQHSNKFMLVLA-SNLPEQFDCA 462 Query: 363 LLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQR---------------L 497 + R D + D P + R+++ R++ L +P +R + Sbjct: 463 I--NSRIDVMVHFDLPQQEERERLVRLHFDNCVL--KPATEGKRRLKLAQFDYGRKCSEV 518 Query: 498 AALTPGFAGADIANV 542 A LT G +G +IA + Sbjct: 519 ARLTEGMSGREIAQL 533
>BCS1_XENLA (Q7ZTL7) Mitochondrial chaperone BCS1 (BCS1-like protein)| Length = 419 Score = 55.5 bits (132), Expect = 1e-07 Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 4/131 (3%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGES--GVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPS 179 LL GPPG GK+ A AGE + MS+S S + R+ +L A Q S Sbjct: 227 LLYGPPGCGKSSFITALAGELEYSICLMSLSDSSLSD-------DRLNHLLSVAPQ--QS 277 Query: 180 IVFIDEIDA--IXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDIL 353 I+ ++++DA + + T + LL +DG +T +V TN D L Sbjct: 278 IILLEDVDAAFVSRDLNKQNPTAYQGMGRLTFSGLLNALDGVASTEARIVFMTTNHIDRL 337 Query: 354 DKALLRPGRFD 386 D AL+RPGR D Sbjct: 338 DPALIRPGRVD 348
>BCS1_YEAST (P32839) Mitochondrial chaperone BCS1| Length = 456 Score = 55.1 bits (131), Expect = 2e-07 Identities = 38/134 (28%), Positives = 66/134 (49%), Gaps = 2/134 (1%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGES--GVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPS 179 LL GPPG+GKT +A AGE + +++S ++ + R+ +L + S Sbjct: 264 LLYGPPGSGKTSFIQALAGELDYNICILNLSENNLTD-------DRLNHLMNNMPE--RS 314 Query: 180 IVFIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDK 359 I+ +++IDA G + T + LL +DG ++ + TN P+ LD Sbjct: 315 ILLLEDIDAAFNKRSQTGEQGFHSS--VTFSGLLNALDGVTSSEETITFMTTNHPEKLDA 372 Query: 360 ALLRPGRFDRQITI 401 A++RPGR D ++ + Sbjct: 373 AIMRPGRIDYKVFV 386
>BCS1_BRARE (Q7ZV60) Mitochondrial chaperone BCS1 (BCS1-like protein)| Length = 420 Score = 54.3 bits (129), Expect = 3e-07 Identities = 50/174 (28%), Positives = 75/174 (43%), Gaps = 6/174 (3%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPG GK+ A AGE G +S SD + R+ +L A Q SI+ Sbjct: 227 LLYGPPGCGKSSFITALAGELGYSICLMSLSDR-----SLSDDRLNHLLSVAPQ--QSII 279 Query: 186 FIDEIDA------IXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPD 347 ++++DA + + G T + LL +DG ++ +V TN + Sbjct: 280 LLEDVDAAFVSRELLPTENPLAYQGMG---RLTFSGLLNALDGVASSEARIVFMTTNFIE 336 Query: 348 ILDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNEPTYFSQRLAALT 509 LD AL+RPGR D + + Q+FR + + + Q LAA T Sbjct: 337 RLDPALVRPGRVDLKQYVGHCSHWQLTQMFRRFYPQESAAEADHFSEQALAAHT 390
>BCS1_HUMAN (Q9Y276) Mitochondrial chaperone BCS1 (BCS1-like protein) (H-BCS1)| Length = 419 Score = 52.8 bits (125), Expect = 9e-07 Identities = 41/131 (31%), Positives = 61/131 (46%), Gaps = 4/131 (3%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGE--SGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPS 179 LL GPPG GK+ A AGE + +S++ S + R+ +L A Q S Sbjct: 227 LLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSD-------DRLNHLLSVAPQ--QS 277 Query: 180 IVFIDEIDAIXXXXXXXXFSGSNDER--ESTLNQLLVEMDGFGTTAGVVVLAGTNRPDIL 353 +V ++++DA + + T + LL +DG +T +V TN D L Sbjct: 278 LVLLEDVDAAFLSRDLAVENPVKYQGLGRLTFSGLLNALDGVASTEARIVFMTTNHVDRL 337 Query: 354 DKALLRPGRFD 386 D AL+RPGR D Sbjct: 338 DPALIRPGRVD 348
>BCS1_MOUSE (Q9CZP5) Mitochondrial chaperone BCS1 (BCS1-like protein)| Length = 418 Score = 51.6 bits (122), Expect = 2e-06 Identities = 41/131 (31%), Positives = 61/131 (46%), Gaps = 4/131 (3%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGE--SGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPS 179 LL GPPG GK+ A AGE + +S++ S + R+ +L A Q S Sbjct: 227 LLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSD-------DRLNHLLSVAPQ--QS 277 Query: 180 IVFIDEIDAIXXXXXXXXFSGSNDER--ESTLNQLLVEMDGFGTTAGVVVLAGTNRPDIL 353 +V ++++DA + + T + LL +DG +T +V TN D L Sbjct: 278 LVLLEDVDAAFLSRDLAVENPIKYQGLGRLTFSGLLNALDGVASTEARIVFMTTNYIDRL 337 Query: 354 DKALLRPGRFD 386 D AL+RPGR D Sbjct: 338 DPALIRPGRVD 348
>YCF2_PINKO (Q85WV5) Protein ycf2| Length = 1320 Score = 51.6 bits (122), Expect = 2e-06 Identities = 56/225 (24%), Positives = 91/225 (40%), Gaps = 21/225 (9%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFM--EMFVGVGPSRVRN----------- 146 LL+GP GTG++ L K+ A +S VP + IS + + P R+ Sbjct: 627 LLIGPMGTGRSYLIKSLAADSYVPLIRISLKKLLYGKFLYYPDPGRIPTEFNTFWRDTID 686 Query: 147 ----LFQEARQCAPSIVFIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFG---T 305 F+ A++ +P I++I I + G +S L LL + G + Sbjct: 687 HFHITFELAKRMSPCIIWIPNIHELNVNDTITHLFGLG-FTDSFLGLLLNYISRGGEKDS 745 Query: 306 TAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKLDNE-PTY 482 ++ +A T+ P +D AL+ P R D I I I R + F I L L +E Sbjct: 746 IRNILFIASTHIPQRVDPALIAPNRLDSSINIRMLVIPQRQREFPILLCSKGLYSEKEVS 805 Query: 483 FSQRLAALTPGFAGADIANVCNEAALIAARTDETQITMQHFESAI 617 ++T D+A + NEA + + ++ I AI Sbjct: 806 CPDEFGSITIDSDARDLAALANEALITSITRKKSVIDTNTIRYAI 850
>YCF2_PHYPA (P61243) Protein ycf2| Length = 2259 Score = 51.2 bits (121), Expect = 3e-06 Identities = 54/226 (23%), Positives = 93/226 (41%), Gaps = 20/226 (8%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFM--------EMFVGVGPSRVRNL---F 152 LL+G TG++ L K A S +P + IS + + E ++ + +R L Sbjct: 1553 LLIGSQETGRSYLVKNLAANSFIPLIKISINKLLYNKPDILTESWINILMESLRRLNLIL 1612 Query: 153 QEARQCAPSIVFIDEIDAIXXXXXXXXFSGSNDERESTLNQ---LLVEMDGFG--TTAGV 317 + A + +P I+++ I + S N E + T L GF T + Sbjct: 1613 ELAEKLSPCIIWMPNIHELNVNR-----STQNVESDPTFLLGIFLKYFQTGFSKKNTNNI 1667 Query: 318 VVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFRIYL----TKLKLDNEPTYF 485 +++ T+ P +D AL+ P R DR I I +I R + I L +K + Sbjct: 1668 IIIGSTHLPKKVDPALISPNRLDRLINIRTFNILQRQKKISILLYSKYSKYFYSKKKKSS 1727 Query: 486 SQRLAALTPGFAGADIANVCNEAALIAARTDETQITMQHFESAIDR 623 + T G+ D+A + NE LI+ +++ I + A R Sbjct: 1728 LNEFGSRTIGYNARDLAGLINEILLISINQNQSTIQKKTIRLAFHR 1773
>BCS1_SCHPO (Q9P6Q3) Probable mitochondrial chaperone BCS1 (BCS1-like protein)| Length = 449 Score = 50.1 bits (118), Expect = 6e-06 Identities = 37/127 (29%), Positives = 60/127 (47%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIV 185 LL GPPG+GKT A AGE ++ ++ G+ R+ +L A +V Sbjct: 246 LLYGPPGSGKTSFLYALAGELDYDICVLNLAE-----KGLTDDRLNHLLSNVPPKA--VV 298 Query: 186 FIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 365 ++++D+ G + T + LL +DG ++ ++ TN P+ LD AL Sbjct: 299 LLEDVDSAFQGRERSGEVGFH--ANVTFSGLLNALDGVTSSDERIIFMTTNHPEKLDPAL 356 Query: 366 LRPGRFD 386 +RPGR D Sbjct: 357 VRPGRVD 363
>YCF2_PSINU (Q8WHW9) Protein ycf2| Length = 2313 Score = 49.3 bits (116), Expect = 1e-05 Identities = 46/226 (20%), Positives = 98/226 (43%), Gaps = 14/226 (6%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFME-----------MFVGVGPSRVRNLF 152 LL+G TG++ L K+ A +P + I + ++ +F G R+ F Sbjct: 1603 LLIGSMETGRSYLIKSLAANYCLPLIQIPINKLLDKKVHFESKSVVLFPGESVRRLTLTF 1662 Query: 153 QEARQCAPSIVFIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAG 332 + ++ +P IV+I +I + +L + L +++A Sbjct: 1663 ELVKRMSPCIVWIQDIHELNLDRVMNELEVDPKYLFCSLLKCLSNNSSNYYVRNNIIIAP 1722 Query: 333 TNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLK---LDNEPTYFSQRLAA 503 T+ P +D + + P R D+ I I + +I R++ F + L ++K + ++ + L + Sbjct: 1723 THIPSKVDPSFISPNRLDQLINIRRLNIHQREREF-LALLRVKGFYYKGDLSHLGE-LGS 1780 Query: 504 LTPGFAGADIANVCNEAALIAARTDETQITMQHFESAIDRIIGGLE 641 +T G++ D+ + N L++ E+ + E A+ R + L+ Sbjct: 1781 ITRGYSKRDLTVLANGVLLLSITQKESFVCQNSMELALHRQVRALD 1826
>CLPX_TREDE (Q73M37) ATP-dependent Clp protease ATP-binding subunit clpX| Length = 415 Score = 45.8 bits (107), Expect = 1e-04 Identities = 38/120 (31%), Positives = 56/120 (46%), Gaps = 6/120 (5%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMSISGSDFMEM-FVGVGPSR-----VRNLFQEARQ 167 LL+GP G+GKTLLAK A + VPF + E +VG ++N + ++ Sbjct: 113 LLLGPTGSGKTLLAKTLAQKMQVPFAIADATTLTEAGYVGEDVENILLKLIQNANGDIKE 172 Query: 168 CAPSIVFIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPD 347 I+FIDEID I S + D + Q L+++ GT+A V G P+ Sbjct: 173 AEMGIIFIDEIDKI--SRKSENVSITRDVSGEGVQQALLKIIE-GTSASVPPQGGRKHPN 229
>TRP13_RAT (Q5XHZ9) Thyroid receptor-interacting protein 13 (Thyroid hormone| receptor interactor 13) (Trip-13) Length = 432 Score = 45.8 bits (107), Expect = 1e-04 Identities = 43/172 (25%), Positives = 69/172 (40%), Gaps = 20/172 (11%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMS---------ISGSDFMEMFVGVGPSRVRNLFQE 158 LL GPPGTGKT L KA A + + S I+ + V +FQ+ Sbjct: 176 LLHGPPGTGKTSLCKALAQKLTIRLSSRYRYGQLIEINSHSLFSKWFSESGKLVTKMFQK 235 Query: 159 ARQC-----APSIVFIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVV 323 + A V IDE++++ + +N +L ++D + VV+ Sbjct: 236 IQDLIDDKEALVFVLIDEVESLTAARNACRAGAEPSDAIRVVNAVLTQIDQIKRHSNVVI 295 Query: 324 LAGTNRPDILDKALLRPGRFDRQITIDKPDIK------GRDQIFRIYLTKLK 461 L +N + +D A +D+ DIK IF+IYL+ L+ Sbjct: 296 LTTSNITEKIDVAF-----------VDRADIKQYIGPPSAAAIFKIYLSCLE 336
>TRP13_MOUSE (Q3UA06) Thyroid receptor-interacting protein 13 (Thyroid hormone| receptor interactor 13) (Trip-13) Length = 432 Score = 45.8 bits (107), Expect = 1e-04 Identities = 43/172 (25%), Positives = 69/172 (40%), Gaps = 20/172 (11%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGVPFMS---------ISGSDFMEMFVGVGPSRVRNLFQE 158 LL GPPGTGKT L KA A + + S I+ + V +FQ+ Sbjct: 176 LLHGPPGTGKTSLCKALAQKLTIRLSSRYRYGQLIEINSHSLFSKWFSESGKLVTKMFQK 235 Query: 159 ARQC-----APSIVFIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVV 323 + A V IDE++++ + +N +L ++D + VV+ Sbjct: 236 IQDLIDDKEALVFVLIDEVESLTAARNACRAGAEPSDAIRVVNAVLTQIDQIKRHSNVVI 295 Query: 324 LAGTNRPDILDKALLRPGRFDRQITIDKPDIK------GRDQIFRIYLTKLK 461 L +N + +D A +D+ DIK IF+IYL+ L+ Sbjct: 296 LTTSNITEKIDVAF-----------VDRADIKQYIGPPSAAAIFKIYLSCLE 336
>PCH2_CAEEL (Q09535) Putative pachytene checkpoint protein 2| Length = 424 Score = 45.4 bits (106), Expect = 1e-04 Identities = 33/135 (24%), Positives = 53/135 (39%), Gaps = 14/135 (10%) Frame = +3 Query: 6 LLVGPPGTGKTLLAKATAGESGV---------PFMSISGSDFMEMFVGVGPSRVRNLFQE 158 LL GPPGTGKT L K A + + I+ + V+ +F + Sbjct: 176 LLTGPPGTGKTSLCKGLAQHLSIRMNDKYSKSVMLEINSHSLFSKWFSESGKLVQKMFDQ 235 Query: 159 ARQCAPS-----IVFIDEIDAIXXXXXXXXFSGSNDERESTLNQLLVEMDGFGTTAGVVV 323 + A V IDE++++ + +N LL ++D V++ Sbjct: 236 IDELAEDEKCMVFVLIDEVESLGMCRESSSSRSEPSDAIRAVNALLTQIDRIRRRDNVLI 295 Query: 324 LAGTNRPDILDKALL 368 L +N LDKAL+ Sbjct: 296 LCTSNLESTLDKALV 310
>RFCL_AERPE (Q9YBS5) Replication factor C large subunit (RFC large subunit)| (Clamp loader large subunit) Length = 479 Score = 45.4 bits (106), Expect = 1e-04 Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 5/74 (6%) Frame = +3 Query: 3 ALLVGPPGTGKTLLAKATAGESGVPFMSISGSDF-----MEMFVGVGPSRVRNLFQEARQ 167 ALL GPPG GKT L +A A E + + ++ SD+ +E VG SR R++F+ Sbjct: 52 ALLYGPPGVGKTSLVEAIASEFNLEMIELNASDYRRRSDIERIVGAA-SRKRSMFKRG-- 108 Query: 168 CAPSIVFIDEIDAI 209 ++ +DE+D I Sbjct: 109 ---VVILLDEVDGI 119 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 91,906,206 Number of Sequences: 219361 Number of extensions: 1944598 Number of successful extensions: 10431 Number of sequences better than 10.0: 500 Number of HSP's better than 10.0 without gapping: 9085 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 9937 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6029593548 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
