ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | basd18g18 |
|---|---|
| Clone Library Name | barley_pub |
>PAT5_SOLTU (P15478) Patatin T5 precursor (Potato tuber protein)| Length = 386 Score = 190 bits (483), Expect = 2e-48 Identities = 95/184 (51%), Positives = 124/184 (67%), Gaps = 1/184 (0%) Frame = +2 Query: 47 KVVTILSVDGGGVRGIIPAIVLAFLEKELQKLDG-PDARIADYFDVVAGTSTGGLLTVML 223 ++VT+LS+DGGG++GIIPA +L FLE +LQ++D DAR+ADYFDV+ GTSTGGLLT M+ Sbjct: 27 EMVTVLSIDGGGIKGIIPATILEFLEGQLQEVDNNTDARLADYFDVIGGTSTGGLLTAMI 86 Query: 224 TAPDKDGRPLFDGKDLAKFYIDESPKIFPQKGSIFSKIGSGLATVTGPKYDGKYLHSLLR 403 T P++ RP KD+ FY + PKIF GSIF GPKYDGKYL +L+ Sbjct: 87 TTPNETNRPFAAAKDIVPFYFEHGPKIFQSSGSIF-----------GPKYDGKYLMQVLQ 135 Query: 404 RHLGDTKLDGALTSVVIPAFDIAHLQPIIFSSFQLENQPAKNALLSDIAIGTSAAPTFFP 583 LG+T++ ALT V I +FDI +P+IF+ L P +A + DI T+AAPTFFP Sbjct: 136 EKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPTFFP 195 Query: 584 AHYF 595 HYF Sbjct: 196 PHYF 199
>PAT0_SOLTU (P07745) Patatin precursor (Potato tuber protein)| Length = 386 Score = 183 bits (464), Expect = 4e-46 Identities = 91/184 (49%), Positives = 124/184 (67%), Gaps = 1/184 (0%) Frame = +2 Query: 47 KVVTILSVDGGGVRGIIPAIVLAFLEKELQKLDG-PDARIADYFDVVAGTSTGGLLTVML 223 ++VT+LS+DGGG++GIIPAI+L FLE +LQ++D DAR+ADYFDV+ GTSTGGLLT M+ Sbjct: 27 EMVTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAMI 86 Query: 224 TAPDKDGRPLFDGKDLAKFYIDESPKIFPQKGSIFSKIGSGLATVTGPKYDGKYLHSLLR 403 T P+++ RP KD+ FY + P IF GSIF GP+YDGKYL +L+ Sbjct: 87 TTPNENNRPFAAAKDIVPFYFEHGPHIFNYSGSIF-----------GPRYDGKYLLQVLQ 135 Query: 404 RHLGDTKLDGALTSVVIPAFDIAHLQPIIFSSFQLENQPAKNALLSDIAIGTSAAPTFFP 583 LG+T++ ALT V I +FDI +P+IF+ L P +A + DI T+AAP +FP Sbjct: 136 EKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAESPQLDAKMYDICYSTAAAPIYFP 195 Query: 584 AHYF 595 H+F Sbjct: 196 PHHF 199
>PAT3_SOLTU (P11768) Patatin class 1 precursor (Patatin class I) (Potato tuber| protein) Length = 386 Score = 181 bits (460), Expect = 1e-45 Identities = 91/184 (49%), Positives = 122/184 (66%), Gaps = 1/184 (0%) Frame = +2 Query: 47 KVVTILSVDGGGVRGIIPAIVLAFLEKELQKLDG-PDARIADYFDVVAGTSTGGLLTVML 223 ++VT+LS+DGGG++GIIPAI+L FLE +LQ++D DAR+ADYFDV+ GTSTGGLLT M+ Sbjct: 27 EMVTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAMI 86 Query: 224 TAPDKDGRPLFDGKDLAKFYIDESPKIFPQKGSIFSKIGSGLATVTGPKYDGKYLHSLLR 403 T P+++ RP KD+ FY + P IF GSI GP YDGKYL +L+ Sbjct: 87 TTPNENNRPFAAAKDIVPFYFEHGPHIFNYSGSII-----------GPMYDGKYLLQVLQ 135 Query: 404 RHLGDTKLDGALTSVVIPAFDIAHLQPIIFSSFQLENQPAKNALLSDIAIGTSAAPTFFP 583 LG+T++ ALT V I +FDI +P+IF+ L P +A + DI T+AAP +FP Sbjct: 136 EKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPIYFP 195 Query: 584 AHYF 595 HYF Sbjct: 196 PHYF 199
>PAT1_SOLTU (P15476) Patatin B1 precursor (Potato tuber protein) (Fragment)| Length = 377 Score = 181 bits (458), Expect = 2e-45 Identities = 90/184 (48%), Positives = 123/184 (66%), Gaps = 1/184 (0%) Frame = +2 Query: 47 KVVTILSVDGGGVRGIIPAIVLAFLEKELQKLDG-PDARIADYFDVVAGTSTGGLLTVML 223 ++VT+LS+DGGG++GIIPAI+L FLE +LQ++D DAR+ADYFDV+ GTSTGGLLT M+ Sbjct: 18 EMVTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAMI 77 Query: 224 TAPDKDGRPLFDGKDLAKFYIDESPKIFPQKGSIFSKIGSGLATVTGPKYDGKYLHSLLR 403 T P+++ RP KD+ FY + P IF GSIF GP+YDGKYL +L+ Sbjct: 78 TTPNENNRPFAAAKDIVPFYFEHGPHIFNYSGSIF-----------GPRYDGKYLLQVLQ 126 Query: 404 RHLGDTKLDGALTSVVIPAFDIAHLQPIIFSSFQLENQPAKNALLSDIAIGTSAAPTFFP 583 LG+T++ ALT V I +FDI +P+IF+ L P +A + DI +AAP +FP Sbjct: 127 EKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSIAAAPIYFP 186 Query: 584 AHYF 595 H+F Sbjct: 187 PHHF 190
>PAT2_SOLTU (P15477) Patatin B2 precursor (Potato tuber protein)| Length = 386 Score = 179 bits (455), Expect = 4e-45 Identities = 90/184 (48%), Positives = 122/184 (66%), Gaps = 1/184 (0%) Frame = +2 Query: 47 KVVTILSVDGGGVRGIIPAIVLAFLEKELQKLDG-PDARIADYFDVVAGTSTGGLLTVML 223 ++VT+LS+DGGG++GIIPAI+L FLE +LQ++D DAR+ADYFDV+ GTSTGGLLT M+ Sbjct: 27 EMVTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAMI 86 Query: 224 TAPDKDGRPLFDGKDLAKFYIDESPKIFPQKGSIFSKIGSGLATVTGPKYDGKYLHSLLR 403 T P+++ RP KD+ FY + P IF GSI GP YDGKYL +L+ Sbjct: 87 TTPNENNRPFAAAKDIVPFYFEHGPHIFNYSGSIL-----------GPMYDGKYLLQVLQ 135 Query: 404 RHLGDTKLDGALTSVVIPAFDIAHLQPIIFSSFQLENQPAKNALLSDIAIGTSAAPTFFP 583 LG+T++ ALT V I +FDI +P+IF+ L P +A + DI T+AAP +FP Sbjct: 136 EKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPIYFP 195 Query: 584 AHYF 595 H+F Sbjct: 196 PHHF 199
>PA2G6_HUMAN (O60733) 85 kDa calcium-independent phospholipase A2 (EC 3.1.1.4)| (iPLA2) (CaI-PLA2) (Group VI phospholipase A2) (GVI PLA2) Length = 806 Score = 41.2 bits (95), Expect = 0.002 Identities = 23/55 (41%), Positives = 32/55 (58%) Frame = +2 Query: 59 ILSVDGGGVRGIIPAIVLAFLEKELQKLDGPDARIADYFDVVAGTSTGGLLTVML 223 +L +DGGGV+G+I +L +EK D FD VAGTSTGG+L + + Sbjct: 480 LLCLDGGGVKGLIIIQLLIAIEK------ASGVATKDLFDWVAGTSTGGILALAI 528
>PA2G6_MOUSE (P97819) 85 kDa calcium-independent phospholipase A2 (EC 3.1.1.4)| (iPLA2) (CaI-PLA2) (Group VI phospholipase A2) (GVI PLA2) Length = 752 Score = 40.8 bits (94), Expect = 0.003 Identities = 22/55 (40%), Positives = 32/55 (58%) Frame = +2 Query: 59 ILSVDGGGVRGIIPAIVLAFLEKELQKLDGPDARIADYFDVVAGTSTGGLLTVML 223 +L +DGGGV+G++ +L +EK D FD VAGTSTGG+L + + Sbjct: 426 LLCLDGGGVKGLVIIQLLIAIEK------ASGVATKDLFDWVAGTSTGGILALAI 474
>PA2G6_RAT (P97570) 85 kDa calcium-independent phospholipase A2 (EC 3.1.1.4)| (iPLA2) (CaI-PLA2) (Group VI phospholipase A2) (GVI PLA2) Length = 751 Score = 40.8 bits (94), Expect = 0.003 Identities = 22/55 (40%), Positives = 32/55 (58%) Frame = +2 Query: 59 ILSVDGGGVRGIIPAIVLAFLEKELQKLDGPDARIADYFDVVAGTSTGGLLTVML 223 +L +DGGGV+G++ +L +EK D FD VAGTSTGG+L + + Sbjct: 425 LLCLDGGGVKGLVIIQLLIAIEK------ASGVATKDLFDWVAGTSTGGILALAI 473
>DMP1_BOVIN (Q95120) Dentin matrix acidic phosphoprotein 1 precursor (Dentin| matrix protein 1) (DMP-1) Length = 510 Score = 33.9 bits (76), Expect = 0.37 Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 4/86 (4%) Frame = -1 Query: 304 DFGRLVDVELGQILAVEQRPAILVRRREHH----RQEAPGARAGDDIEVVRDPSIRPVQF 137 D R ++V + + A L + REH RQE+ R+ +D + V+DPS Q Sbjct: 284 DDSRTIEVMSDSTENPDSKEAGLGQSREHSKSESRQESEENRSPEDSQDVQDPSSESSQE 343 Query: 136 LELLFKESEDDGRDDSSHAAAVDAQD 59 ++L +E+ + ++++ H + D D Sbjct: 344 VDLPSQENSSESQEEALHESRGDNPD 369
>MSI3_ARATH (O22469) WD-40 repeat protein MSI3| Length = 424 Score = 33.1 bits (74), Expect = 0.62 Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 5/99 (5%) Frame = -1 Query: 373 VLWPGHRRQTRADLGEDGALLWEDFGRLVDVELGQILAVEQRPAILVRRREHHRQEAPGA 194 V W + A GED L+ D R+ D +L L E P L+ H+ + Sbjct: 311 VEWDPNHETVLASSGEDRRLMVWDINRVGDEQLEIELDAEDGPPELLFSHGGHKAKISDF 370 Query: 193 RAGDD-----IEVVRDPSIRPVQFLELLFKESEDDGRDD 92 D V D S++ Q E +++E ++D DD Sbjct: 371 AWNKDEPWVISSVAEDNSLQVWQMAESIYREDDEDEDDD 409
>HORN_HUMAN (Q86YZ3) Hornerin| Length = 2850 Score = 32.7 bits (73), Expect = 0.81 Identities = 20/79 (25%), Positives = 29/79 (36%) Frame = +1 Query: 214 GDAHGAGQGWPAAVRRQGSGQVLHRRVAQNLPTEGLHLLQDRLGSGDGDRAKVRRQVPPF 393 G +G G + Q SG H + + ++G H S G RQ + Sbjct: 341 GSGQTSGFGQHESGSGQSSGYSKHGSGSGHSSSQGQHGSTSGQASSSGQHGSSSRQSSSY 400 Query: 394 AAPSAPRRHEAGRGSHQRG 450 + RH +GRG H G Sbjct: 401 GQHESASRHSSGRGQHSSG 419 Score = 30.4 bits (67), Expect = 4.0 Identities = 20/79 (25%), Positives = 28/79 (35%) Frame = +1 Query: 214 GDAHGAGQGWPAAVRRQGSGQVLHRRVAQNLPTEGLHLLQDRLGSGDGDRAKVRRQVPPF 393 G H +G G + Q S HR + + + G H R G G + RQ P Sbjct: 250 GSGHSSGYGQHGSRSGQSSRGERHRSSSGSSSSYGQHGSGSRQSLGHGRQGSGSRQSPSH 309 Query: 394 AAPSAPRRHEAGRGSHQRG 450 + H + G H G Sbjct: 310 VRHGSGSGHSSSHGQHGSG 328
>DUS18_PONPY (Q5R8X2) Dual specificity protein phosphatase 18 (EC 3.1.3.48) (EC| 3.1.3.16) Length = 188 Score = 32.3 bits (72), Expect = 1.1 Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 5/66 (7%) Frame = +2 Query: 5 VLANSKVMAAGDQAKVVTILSVDGGGVRGIIPAIVLAFLEKELQKL-----DGPDARIAD 169 V AN+K+M + +Q +V +SV+ V+ L +++Q L D PD+R+ D Sbjct: 33 VAANNKLMLSSNQITMVINVSVE-----------VVNTLYEDIQYLQVPVADAPDSRLCD 81 Query: 170 YFDVVA 187 +FD VA Sbjct: 82 FFDPVA 87
>ETFA_BRAJA (P53573) Electron transfer flavoprotein alpha-subunit (Alpha-ETF)| (Electron transfer flavoprotein large subunit) (ETFLS) Length = 314 Score = 32.0 bits (71), Expect = 1.4 Identities = 26/129 (20%), Positives = 49/129 (37%), Gaps = 17/129 (13%) Frame = +2 Query: 11 ANSKVMAAGDQAKVVTILSVDGGGVRGIIPAIVLAFLEKELQKLDGPDARIADYFDVVAG 190 A+ +V+ AG+ AK + GV+ ++ A + + L +A +D + Sbjct: 30 ADVEVLVAGEGAKAAADAAAKLAGVKKVLLADGALYAHDLAEPLAALIVSLAPSYDAIVA 89 Query: 191 TSTGGLLTVM-----------------LTAPDKDGRPLFDGKDLAKFYIDESPKIFPQKG 319 +T VM + APD RP++ G + ++ K+ + Sbjct: 90 PATSRFKNVMPRVAALLDVMQVSEIIKVVAPDTYERPIYAGNAIQTVKSKDAKKVITVRT 149 Query: 320 SIFSKIGSG 346 S F+ G G Sbjct: 150 STFAAAGEG 158
>ZN509_HUMAN (Q6ZSB9) Zinc finger protein 509| Length = 765 Score = 30.8 bits (68), Expect = 3.1 Identities = 20/54 (37%), Positives = 27/54 (50%) Frame = +1 Query: 292 VAQNLPTEGLHLLQDRLGSGDGDRAKVRRQVPPFAAPSAPRRHEAGRGSHQRGD 453 +++N P HLLQ+ S D + K + P A+PS R H AG S Q D Sbjct: 148 ISENYPP---HLLQEC--SADAQQNKTLDESHPHASPSVNRHHSAGEISKQAPD 196
>AGRN_RAT (P25304) Agrin precursor| Length = 1959 Score = 30.8 bits (68), Expect = 3.1 Identities = 20/66 (30%), Positives = 28/66 (42%) Frame = -2 Query: 516 WFSNWKLEKMMGCRWAISKAGITTLVRAPSSFVSPRCRRSSEWRYLPSYFGPVTVARPEP 337 WF + G A++ A TT+ R P+S V+PR S R + P T RP Sbjct: 1145 WFPTFFTGAATGTTAAMATARATTVSRLPASSVTPRVYPSHTSRPVGRTTAPPTTRRPPT 1204 Query: 336 ILEKME 319 M+ Sbjct: 1205 TATNMD 1210
>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)| Length = 5179 Score = 30.8 bits (68), Expect = 3.1 Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 1/75 (1%) Frame = -2 Query: 240 SLSGAVSITVKRPPVLVPA-TTSK*SAILASGPSNFWSSFSRKARTMAGMIPLTPPPSTL 64 +L A+ +T PP A TT+ L+ PS S R P PST+ Sbjct: 4240 TLPPAIEMTSTAPPSTPTAPTTTSGGHTLSPPPSTTTSPPGTPTRGTTTGSSSAPTPSTV 4299 Query: 63 RMVTTFAWSPAAITL 19 + TT AW+P L Sbjct: 4300 QTTTTSAWTPTPTPL 4314
>KLCA2_ECOLI (P52603) Antirestriction protein klcA| Length = 146 Score = 30.4 bits (67), Expect = 4.0 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = -2 Query: 447 TLVRAPSSFVSPRCRRSSEWRYLPSYFGP 361 T V+ PS V+ R + R+LP+YFGP Sbjct: 2 TDVQIPSPIVATRVAEADRLRFLPTYFGP 30
>BEM46_SCHPO (P54069) Protein bem46| Length = 299 Score = 30.4 bits (67), Expect = 4.0 Identities = 18/52 (34%), Positives = 26/52 (50%) Frame = +2 Query: 179 VVAGTSTGGLLTVMLTAPDKDGRPLFDGKDLAKFYIDESPKIFPQKGSIFSK 334 VV G S GG + + LTA ++D ++ D P +FP GSI S+ Sbjct: 163 VVYGQSIGGAVAIALTAKNQDRISALILENTFTSIKDMIPTVFPYGGSIISR 214
>IF2_GLUOX (Q5FQM3) Translation initiation factor IF-2| Length = 917 Score = 30.4 bits (67), Expect = 4.0 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 4/49 (8%) Frame = +1 Query: 313 EGLHLLQDRLGSGDGDRAKVRRQVPPFAAPSAPRRHEA----GRGSHQR 447 E LHL GD +R R+ P A P+ PRR A G GS +R Sbjct: 239 ETLHLRSGAAAGGDDERRPAPRRSGPGAPPAPPRRPSAPSRKGGGSDRR 287
>PALST_EUGGR (P84739) Photoactivated adenylate cyclase alpha-subunit-like| protein ST- Length = 1019 Score = 30.4 bits (67), Expect = 4.0 Identities = 27/81 (33%), Positives = 33/81 (40%), Gaps = 5/81 (6%) Frame = +1 Query: 313 EGLHLLQ-----DRLGSGDGDRAKVRRQVPPFAAPSAPRRHEAGRGSHQRGDPGLRYRPP 477 EGLH + R+G G + + +VP P RHE G HQR PG RP Sbjct: 778 EGLHAVLLWYPGPRMGIGCANHQEDHLRVPRRPGPG---RHEEGGRRHQRPGPG---RPR 831 Query: 478 AAHHLLQLPVGEPARQERAPV 540 H LP G R + V Sbjct: 832 RGHPF--LPQGSTTRPHQFSV 850
>SSX1_HUMAN (Q16384) Protein SSX1 (Synovial sarcoma, X breakpoint 1)| Length = 188 Score = 30.4 bits (67), Expect = 4.0 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = +2 Query: 296 PKIFPQKGSIFSKIGSGLATVTGPKYDGKYLH 391 PKI P+K + G++ +GP+ DGK LH Sbjct: 109 PKIMPKKPAEDENDSKGVSEASGPQNDGKQLH 140
>SYN1_RAT (P09951) Synapsin-1 (Synapsin I)| Length = 704 Score = 30.0 bits (66), Expect = 5.3 Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 3/67 (4%) Frame = +1 Query: 352 DGDRAKVRRQVPPFAAPSAPRRHEA--GRGSH-QRGDPGLRYRPPAAHHLLQLPVGEPAR 522 D D+ + V + PR+ +A GRGSH Q PG P Q P G PA+ Sbjct: 400 DEDKQLIVELVVNKMTQALPRQRDASPGRGSHSQTPSPGAL---PLGRQTSQQPAGPPAQ 456 Query: 523 QERAPVG 543 Q P G Sbjct: 457 QRPPPQG 463
>SYN1_BOVIN (P17599) Synapsin-1 (Synapsin I)| Length = 706 Score = 30.0 bits (66), Expect = 5.3 Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 5/69 (7%) Frame = +1 Query: 352 DGDRAKVRRQVPPFAAPSAPRRHEA----GRGSH-QRGDPGLRYRPPAAHHLLQLPVGEP 516 D D+ + V A + PR+ + GRGSH Q PG P + Q P G P Sbjct: 400 DEDKQLIVELVVNKMAQALPRQRQRDASPGRGSHSQTPSPGAL---PLGRQISQQPAGPP 456 Query: 517 ARQERAPVG 543 A+Q P G Sbjct: 457 AQQRPPPQG 465
>NIR_NEUCR (P38681) Nitrite reductase [NAD(P)H] (EC 1.7.1.4)| Length = 1176 Score = 30.0 bits (66), Expect = 5.3 Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 3/106 (2%) Frame = -1 Query: 322 GALLWEDFGRLVDVEL-GQILAVEQRPAILVRR--REHHRQEAPGARAGDDIEVVRDPSI 152 G L E L+D+++ G+++ +E+ +L R+ E G R G +EV+ + Sbjct: 191 GLLGLEAAKALMDLQVFGRVVVIERNGWVLSRQVDGEAGALVLEGVR-GLGVEVLTRKRV 249 Query: 151 RPVQFLELLFKESEDDGRDDSSHAAAVDAQDGHHLRLVTCCHHFGV 14 + V+ ES+D+G + + +DG +L T C G+ Sbjct: 250 KEVEC-----DESKDEGEKEKKRVKGIRFEDGEYLACSTICFAIGI 290
>TAP1_HUMAN (Q03518) Antigen peptide transporter 1 (APT1) (Peptide transporter| TAP1) (ATP-binding cassette sub-family B member 2) (Peptide transporter PSF1) (Peptide supply factor 1) (PSF-1) (Peptide transporter involved in antigen processing 1) Length = 748 Score = 30.0 bits (66), Expect = 5.3 Identities = 39/161 (24%), Positives = 62/161 (38%), Gaps = 5/161 (3%) Frame = +2 Query: 107 VLAFLEKELQKLDGPDARIADYFDVVAGTSTGGLLTVMLTAPDKDGRPLFDGKDLAKFYI 286 VL + +QK G +I +Y D GLLT + +G F F Sbjct: 460 VLLSIYPRVQKAVGSSEKIFEYLDRTPRCPPSGLLTPL----HLEGLVQFQD---VSFAY 512 Query: 287 DESPKIFPQKGSIFSKIGSGLATVTGPKYDGKYLHSLLRRHL-----GDTKLDGALTSVV 451 P + +G F+ + + GP GK + L ++L G LDG Sbjct: 513 PNRPDVLVLQGLTFTLRPGEVTALVGPNGSGKSTVAALLQNLYQPTGGQLLLDGK----P 568 Query: 452 IPAFDIAHLQPIIFSSFQLENQPAKNALLSDIAIGTSAAPT 574 +P ++ +L + + Q E Q +L +IA G + PT Sbjct: 569 LPQYEHRYLHRQVAAVGQ-EPQVFGRSLQENIAYGLTQKPT 608
>TAP1_GORGO (Q28433) Antigen peptide transporter 1 (APT1) (Peptide transporter| TAP1) (ATP-binding cassette sub-family B member 2) Length = 748 Score = 30.0 bits (66), Expect = 5.3 Identities = 39/161 (24%), Positives = 62/161 (38%), Gaps = 5/161 (3%) Frame = +2 Query: 107 VLAFLEKELQKLDGPDARIADYFDVVAGTSTGGLLTVMLTAPDKDGRPLFDGKDLAKFYI 286 VL + +QK G +I +Y D GLLT + +G F F Sbjct: 460 VLLSIYPRVQKAVGSSEKIFEYLDRTPRCPPSGLLTPL----HLEGLVQFQD---VSFAY 512 Query: 287 DESPKIFPQKGSIFSKIGSGLATVTGPKYDGKYLHSLLRRHL-----GDTKLDGALTSVV 451 P + +G F+ + + GP GK + L ++L G LDG Sbjct: 513 PNRPDVLVLQGLTFTLHPGEVTALVGPNGSGKSTVAALLQNLYQPTGGQLLLDGK----P 568 Query: 452 IPAFDIAHLQPIIFSSFQLENQPAKNALLSDIAIGTSAAPT 574 +P ++ +L + + Q E Q +L +IA G + PT Sbjct: 569 LPQYEHRYLHRQVAAVGQ-EPQVFGRSLQENIAYGLTQKPT 608
>GLUQ_METCA (Q60BF9) Glutamyl-Q tRNA(Asp) synthetase (EC 6.1.1.-) (Glu-Q-RSs)| Length = 302 Score = 30.0 bits (66), Expect = 5.3 Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 1/38 (2%) Frame = +1 Query: 403 SAPRRHEAGRGSHQRGDPGLRY-RPPAAHHLLQLPVGE 513 + PRR AG G G RY PPA H L+L VG+ Sbjct: 106 TCPRRELAGSGPIYSGRCRARYPHPPAGEHALRLRVGD 143
>PRAX_HUMAN (Q9BXM0) Periaxin| Length = 1461 Score = 30.0 bits (66), Expect = 5.3 Identities = 33/109 (30%), Positives = 44/109 (40%), Gaps = 3/109 (2%) Frame = +1 Query: 217 DAHGAGQGWPAAVRRQGSGQVLHRRVAQNLPTEGLHLLQDRLGSGDGDRAK---VRRQVP 387 + G+G+G A R+G RV LP GL +GD A VR + P Sbjct: 1359 EEEGSGEG---ASGRRG-------RVRVRLPRVGLAAPSKASRGQEGDAAPKSPVREKSP 1408 Query: 388 PFAAPSAPRRHEAGRGSHQRGDPGLRYRPPAAHHLLQLPVGEPARQERA 534 F P +A GS + + GLR R P+ + PAR E A Sbjct: 1409 KFRFPRVSLSPKARSGSGDQEEGGLRVRLPSV-GFSETGAPGPARMEGA 1456
>DUS18_HUMAN (Q8NEJ0) Dual specificity protein phosphatase 18 (EC 3.1.3.48) (EC| 3.1.3.16) (Low molecular weight dual specificity phosphatase 20) Length = 188 Score = 30.0 bits (66), Expect = 5.3 Identities = 16/61 (26%), Positives = 33/61 (54%) Frame = +2 Query: 5 VLANSKVMAAGDQAKVVTILSVDGGGVRGIIPAIVLAFLEKELQKLDGPDARIADYFDVV 184 V AN+K+M + +Q +V +SV+ ++ + ++ D P++R+ D+FD + Sbjct: 33 VAANNKLMLSSNQITMVINVSVE------VVNTLYEDIQYMQVPVADSPNSRLCDFFDPI 86 Query: 185 A 187 A Sbjct: 87 A 87
>YGY3_HALSQ (P21561) Hypothetical 50.6 kDa protein in the 5'region of gyrA and| gyrB (ORF 3) Length = 437 Score = 29.6 bits (65), Expect = 6.9 Identities = 24/77 (31%), Positives = 31/77 (40%) Frame = +1 Query: 283 HRRVAQNLPTEGLHLLQDRLGSGDGDRAKVRRQVPPFAAPSAPRRHEAGRGSHQRGDPGL 462 HRR + P +L+ G GDG + RR P P+ EAGRG+H Sbjct: 212 HRR--ERHPPTARDVLRGEPGHGDGHHLEGRRGRP------RPQGREAGRGAH------- 256 Query: 463 RYRPPAAHHLLQLPVGE 513 PP + L GE Sbjct: 257 ---PPQVRARIYLAAGE 270
>Y2003_STRP8 (P67375) Hypothetical UPF0230 protein spyM18_2003| Length = 286 Score = 29.6 bits (65), Expect = 6.9 Identities = 16/58 (27%), Positives = 29/58 (50%) Frame = +2 Query: 113 AFLEKELQKLDGPDARIADYFDVVAGTSTGGLLTVMLTAPDKDGRPLFDGKDLAKFYI 286 A + ++L + D PDA + + D +A G LT++ G+ L + KD+ + I Sbjct: 100 ALMARDLVREDYPDA-VIEIVDTLAAAGGEGYLTILAAEARDSGKNLLETKDIVEAVI 156
>Y1936_STRP1 (P67374) Hypothetical UPF0230 protein SPy1936/M5005_Spy1650| Length = 286 Score = 29.6 bits (65), Expect = 6.9 Identities = 16/58 (27%), Positives = 29/58 (50%) Frame = +2 Query: 113 AFLEKELQKLDGPDARIADYFDVVAGTSTGGLLTVMLTAPDKDGRPLFDGKDLAKFYI 286 A + ++L + D PDA + + D +A G LT++ G+ L + KD+ + I Sbjct: 100 ALMARDLVREDYPDA-VIEIVDTLAAAGGEGYLTILAAEARDSGKNLLETKDIVEAVI 156
>Y1658_STRP6 (Q5X9X0) Hypothetical UPF0230 protein M6_Spy1658| Length = 286 Score = 29.6 bits (65), Expect = 6.9 Identities = 16/58 (27%), Positives = 29/58 (50%) Frame = +2 Query: 113 AFLEKELQKLDGPDARIADYFDVVAGTSTGGLLTVMLTAPDKDGRPLFDGKDLAKFYI 286 A + ++L + D PDA + + D +A G LT++ G+ L + KD+ + I Sbjct: 100 ALMARDLVREDYPDA-VIEIVDTLAAAGGEGYLTILAAEARDSGKNLLETKDIVEAVI 156
>SLH1_YEAST (P53327) Antiviral helicase SLH1 (EC 3.6.1.-) (SKI2-like helicase 1)| Length = 1967 Score = 29.6 bits (65), Expect = 6.9 Identities = 28/98 (28%), Positives = 42/98 (42%) Frame = +2 Query: 152 DARIADYFDVVAGTSTGGLLTVMLTAPDKDGRPLFDGKDLAKFYIDESPKIFPQKGSIFS 331 DA+I Y D+ LT +L + GRP +D A Y ES K+F + F Sbjct: 1484 DAKIEGYRDMD--------LTDILQMMGRAGRPAYDTTGTAIVYTKESKKMFYKH---FL 1532 Query: 332 KIGSGLATVTGPKYDGKYLHSLLRRHLGDTKLDGALTS 445 +G + + LH +L HLG G++T+ Sbjct: 1533 NVGFPVES---------SLHKVLDDHLGAEITSGSITN 1561
>PRP31_BRARE (Q7SXM7) U4/U6 small nuclear ribonucleoprotein Prp31 (Pre-mRNA| processing factor 31) Length = 508 Score = 29.6 bits (65), Expect = 6.9 Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%) Frame = -1 Query: 502 EAGEDDGLQVGDIEGR-DHHAGESPVQLRVAEVPTEQRME 386 EAGE+DGL G EG D GE V + ++P E ++ Sbjct: 13 EAGEEDGLYPGGEEGESDGEPGERQVDGGLEDIPEEMEVD 52
>RLUD_PSEAE (P33640) Ribosomal large subunit pseudouridine synthase D (EC| 5.4.99.-) (rRNA-uridine isomerase D) (rRNA pseudouridylate synthase D) Length = 320 Score = 29.6 bits (65), Expect = 6.9 Identities = 30/87 (34%), Positives = 39/87 (44%), Gaps = 3/87 (3%) Frame = -1 Query: 421 RVAEVPTE---QRMEVLAVVLWPGHRRQTRADLGEDGALLWEDFGRLVDVELGQILAVEQ 251 R AEVP E QR++ +A L+P H R A +DG L VD + + + Sbjct: 7 RAAEVPFELGGQRLDQIAAQLFPEHSRSRLAGWIKDGRL-------TVDGAVLRPRDIVH 59 Query: 250 RPAILVRRREHHRQEAPGARAGDDIEV 170 A LV E QEA G DIE+ Sbjct: 60 SGAQLVLEAE---QEAQGEWLAQDIEL 83
>CS021_PONPY (Q5RBH3) Protein C19orf21 homolog| Length = 685 Score = 29.3 bits (64), Expect = 9.0 Identities = 13/24 (54%), Positives = 16/24 (66%) Frame = -1 Query: 511 LQLEAGEDDGLQVGDIEGRDHHAG 440 L LE GED+GL+V + RD H G Sbjct: 82 LHLETGEDEGLKVYRLGARDAHQG 105
>CRU1_BRANA (P33523) Cruciferin BnC1 precursor (11S globulin) (12S storage| protein) [Contains: Cruciferin BnC1 alpha subunit; Cruciferin BnC1 beta subunit] Length = 490 Score = 29.3 bits (64), Expect = 9.0 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 3/54 (5%) Frame = -2 Query: 396 SEWRYLPSYFGPVT---VARPEPILEKMEPFCGKILGDSSM*NLARSLPSNSGR 244 S+ YLPS+F VA+ E ++ ++ P C + DSS+ + PS G+ Sbjct: 75 SKGLYLPSFFSTAKLSFVAKGEGLMGRVVPGCAETFQDSSVFQPSGGSPSGEGQ 128
>PDR13_ORYSA (Q8S628) Pleiotropic drug resistance protein 13| Length = 1441 Score = 29.3 bits (64), Expect = 9.0 Identities = 17/58 (29%), Positives = 30/58 (51%) Frame = +2 Query: 296 PKIFPQKGSIFSKIGSGLATVTGPKYDGKYLHSLLRRHLGDTKLDGALTSVVIPAFDI 469 P + +G I S++G + GP +DG +H L+++LG + T V+ AF + Sbjct: 1367 PVAWTLRGVITSQLGDVDTRIVGPGFDGT-VHEFLQQNLGFEQGMTGATVAVLVAFSV 1423
>MURA_PELLD (Q3B5D7) UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC| 2.5.1.7) (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT) Length = 424 Score = 29.3 bits (64), Expect = 9.0 Identities = 25/69 (36%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Frame = +2 Query: 38 DQAKVVTILS---VDGGGV--RGIIPAIVLAFLEKELQKLDGPDARIADYFDVVAGTSTG 202 D+ + TIL+ + GG V RG+IP+ +E LQK RI D V STG Sbjct: 234 DRIEAGTILAAAAITGGSVTIRGVIPS----HMESVLQKFSDAGCRIETTDDTVILKSTG 289 Query: 203 GLLTVMLTA 229 L +TA Sbjct: 290 RLKATDITA 298
>YBBA_SCHPO (O60072) Putative helicase C13G1.10c (EC 3.6.1.-)| Length = 1935 Score = 29.3 bits (64), Expect = 9.0 Identities = 23/94 (24%), Positives = 38/94 (40%) Frame = +2 Query: 167 DYFDVVAGTSTGGLLTVMLTAPDKDGRPLFDGKDLAKFYIDESPKIFPQKGSIFSKIGSG 346 +Y+D G LT +L + GRP FD +A+ ++ + K F + + SG Sbjct: 1473 EYYDAKIGGYKDMDLTDVLQMLGRAGRPQFDNSGVARIFVQDIKKSFYK-----HFLHSG 1527 Query: 347 LATVTGPKYDGKYLHSLLRRHLGDTKLDGALTSV 448 + YLH +L HL G + + Sbjct: 1528 FPVES-------YLHKVLDNHLNAEIATGTIDCI 1554
>TENS_CHICK (Q04205) Tensin| Length = 1744 Score = 29.3 bits (64), Expect = 9.0 Identities = 22/74 (29%), Positives = 26/74 (35%), Gaps = 3/74 (4%) Frame = +1 Query: 265 GSGQVLHRRVAQNLPTE---GLHLLQDRLGSGDGDRAKVRRQVPPFAAPSAPRRHEAGRG 435 GS + LHR VA N P G + S G R V P A P +P Sbjct: 1264 GSPRTLHRTVATNTPPSPGFGRRAANPAVASVPGSPGLGRHTVSPHAPPGSPSLARHQMA 1323 Query: 436 SHQRGDPGLRYRPP 477 + G P Y P Sbjct: 1324 AVPPGSPMYGYSSP 1337
>PRIM_LISMO (P47762) DNA primase (EC 2.7.7.-)| Length = 626 Score = 29.3 bits (64), Expect = 9.0 Identities = 16/68 (23%), Positives = 37/68 (54%), Gaps = 4/68 (5%) Frame = +2 Query: 143 DGPDARIADYFDVVAGTSTGGLLTV--MLTAPDKDGRPLFDG--KDLAKFYIDESPKIFP 310 +G DA + D V + GL++ M+ +PD+ G+P F+ + L ++ +++ K Sbjct: 532 EGNDADPTKFMDSVPDAAMKGLISSLEMVISPDEQGKPQFEDYIRSLKRYKLEQKKKELE 591 Query: 311 QKGSIFSK 334 Q+ + +++ Sbjct: 592 QELATYNR 599
>NFASC_HUMAN (O94856) Neurofascin precursor| Length = 1347 Score = 29.3 bits (64), Expect = 9.0 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 3/62 (4%) Frame = +1 Query: 241 WPAAVRRQGS--GQVLHRRVAQNLPTEGLHLLQDRL-GSGDGDRAKVRRQVPPFAAPSAP 411 W + R+Q S G L V++ P L + G GDG R++ + P PSAP Sbjct: 876 WVSQKRQQASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRGDGPRSETKEFTTPEGVPSAP 935 Query: 412 RR 417 RR Sbjct: 936 RR 937 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 75,581,222 Number of Sequences: 219361 Number of extensions: 1763865 Number of successful extensions: 7013 Number of sequences better than 10.0: 44 Number of HSP's better than 10.0 without gapping: 6603 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6992 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5216272880 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
