ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd18g10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_191920.1| Oryza sativa (japonica cultivar-group), predic... 615 e-173
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 309 7e-81
3dbj|AP003760.4| Oryza sativa (japonica cultivar-group) genomic D... 309 7e-81
4gb|AC105001.3| Homo sapiens chromosome 8, clone CTD-2135J3, comp... 46 0.16
5dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 44 0.62
6emb|BX005457.10| Zebrafish DNA sequence from clone DKEY-216J10 i... 42 2.4
7dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
8gb|AY228175.1|AY228174S2 Streptomyces murayamaensis putative ary... 42 2.4
9gb|AC084576.1|CBRG39N24 Caenorhabditis briggsae cosmid G39N24, c... 42 2.4
10dbj|AP004305.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
11ref|NM_196955.1| Oryza sativa (japonica cultivar-group) putative... 40 9.6
12ref|NM_196736.1| Oryza sativa (japonica cultivar-group) hypothet... 40 9.6
13gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, compl... 40 9.6
14gb|AC158164.3| Mus musculus BAC clone RP23-457E24 from chromosom... 40 9.6
15gb|AC008324.3| Drosophila melanogaster clone BACR25K01, complete... 40 9.6
16gb|AC008325.5| Drosophila melanogaster clone BACR05M06, complete... 40 9.6
17ref|XM_359910.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 9.6
18gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple... 40 9.6
19gb|AC102228.8| Mus musculus chromosome 13, clone RP24-64M1, comp... 40 9.6
20tpg|BK003319.1| TPA: TPA_inf: Drosophila melanogaster HDC00897 (... 40 9.6
21gb|AC078911.11| Mus musculus Strain C57BL6/J Chromosome 2 RP23-1... 40 9.6
22dbj|D88013.1| Rhodococcus erythropolis DNA for hydroxylase 2,3... 40 9.6
23gb|CP000249.1| Frankia sp. CcI3, complete genome 40 9.6
24dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.6
25gb|AC025907.2|AC025907 Oryza sativa (japonica cultivar-group) ch... 40 9.6
26gb|AC026815.8|AC026815 Oryza sativa chromosome 10 BAC OSJNBa0079... 40 9.6
27dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 9.6
28emb|AL928862.13| Mouse DNA sequence from clone RP23-88J10 on chr... 40 9.6
29gb|AE005060.1| Halobacterium sp. NRC-1 section 91 of 170 of the ... 40 9.6
30ref|XM_321679.2| Anopheles gambiae str. PEST ENSANGP00000015764 ... 40 9.6
31dbj|AK101055.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.6
32emb|BX255920.4| Zebrafish DNA sequence from clone CH211-155K23 i... 40 9.6
33gb|AE003609.4| Drosophila melanogaster chromosome 2L, section 18... 40 9.6
34emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 40 9.6
35gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 9.6
36gb|AC130474.12| Mus musculus chromosome 7, clone RP23-178C20, co... 40 9.6
37gb|AC170913.2| Mus musculus BAC clone RP23-197F6 from chromosome... 40 9.6 
>ref|NM_191920.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2679

 Score =  615 bits (310), Expect = e-173
 Identities = 574/662 (86%)
 Strand = Plus / Plus

                                                                        
Query: 42   ggcgtcgccgatgctgttttctggggaggcggcgtggctatcctcaccgaggacaaccgc 101
            ||||| ||||| ||||  ||||||||||||||||| ||| ||||||| ||||||||||||
Sbjct: 637  ggcgttgccgacgctgccttctggggaggcggcgtagctgtcctcacggaggacaaccgc 696

                                                                        
Query: 102  gtcgtggtcaccaccgacatcgaggtcgacgacccccacccgcgggagctcgccgacccg 161
            |||||||| ||||| |||||||| | ||  ||||| |||||||| ||| |||||||||| 
Sbjct: 697  gtcgtggtgaccacggacatcgacgccgcggaccctcacccgcgtgagttcgccgaccct 756

                                                                        
Query: 162  ggcgttgccgaggacgagcaggtgctgtgcatggccgtggtggagccacagttcgtcatg 221
             |||||| | ||||||||||||||||||||||||| ||||||||||| ||||| ||||||
Sbjct: 757  tgcgttggccaggacgagcaggtgctgtgcatggctgtggtggagccgcagtttgtcatg 816

                                                                        
Query: 222  tccgggagtccagaggttctgcttgcagttggcgatcgggtagtggcagttgacgaggat 281
            |||||||| |||||||| |||||||| ||||| ||||| ||  |||| ||||| ||||||
Sbjct: 817  tccgggagcccagaggtactgcttgcggttggtgatcgagtgctggcggttgatgaggat 876

                                                                        
Query: 282  ggcgtgcaggtgctcggagaggccctggagattggacccgtgcagaaaatggcggtgtca 341
            |  ||||||   |||||   ||  |||||||||||||| |||||||| ||||| || || 
Sbjct: 877  gatgtgcagacactcgggttggagctggagattggacctgtgcagaagatggcagtttcc 936

                                                                        
Query: 342  ccaaacggaaagctgcttgcagcgtttgcacatgatgggcgcttgctcgtaatccccacg 401
            || || || ||||||||||| || ||||| || ||||||||| ||||||| ||||| |||
Sbjct: 937  cccaatgggaagctgcttgccgcatttgcgcacgatgggcgcctgctcgtcatccctacg 996

                                                                        
Query: 402  gatttctccaggatcatattcgagtatgagtgtgattctgcattaccaccggatcaaata 461
            |||||||||| ||| || |||||||||||||||||||| ||||| ||||| |||||||||
Sbjct: 997  gatttctccaagataatcttcgagtatgagtgtgattccgcattgccaccagatcaaata 1056

                                                                        
Query: 462  gcttggtgtgggttggacagtgtgctcctttactggtctgaagtgcttttgatggttgga 521
            ||||||||||| |||||||| ||||| ||||||||||| | ||  |||||||||||||| 
Sbjct: 1057 gcttggtgtggattggacagcgtgcttctttactggtcagcagctcttttgatggttggt 1116

                                                                        
Query: 522  cccaatggagatccagtgcaatacaattatgatgaacctgtaatgctcattccagagtgt 581
            || ||||||||||| ||||  || ||||| ||||||||  ||| ||||||||||||||||
Sbjct: 1117 ccaaatggagatccggtgctgtataattacgatgaacccataaagctcattccagagtgt 1176

                                                                        
Query: 582  gatggtgtaagaatcctctcaaattcaagtatggaatttctacaccgagttccagattct 641
            ||||||||||||||||||||||| |||| ||||||||| ||||||||||| || ||||| 
Sbjct: 1177 gatggtgtaagaatcctctcaaactcaaatatggaattcctacaccgagtccctgattcc 1236

                                                                        
Query: 642  actacatcaatttttggcattggaagcatgtctccagcagcattactgtatgatgctaga 701
            |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 1237 actacatcaatttttggcattggaagcatgtccccagcagcattgctgtatgatgctaga 1296

              
Query: 702  ga 703
            ||
Sbjct: 1297 ga 1298
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  309 bits (156), Expect = 7e-81
 Identities = 336/396 (84%)
 Strand = Plus / Plus

                                                                            
Query: 42       ggcgtcgccgatgctgttttctggggaggcggcgtggctatcctcaccgaggacaaccgc 101
                ||||| ||||| ||||  ||||||||||||||||| ||| ||||||| ||||||||||||
Sbjct: 27251198 ggcgttgccgacgctgccttctggggaggcggcgtagctgtcctcacggaggacaaccgc 27251257

                                                                            
Query: 102      gtcgtggtcaccaccgacatcgaggtcgacgacccccacccgcgggagctcgccgacccg 161
                |||||||| ||||| |||||||| | ||  ||||| |||||||| ||| |||||||||| 
Sbjct: 27251258 gtcgtggtgaccacggacatcgacgccgcggaccctcacccgcgtgagttcgccgaccct 27251317

                                                                            
Query: 162      ggcgttgccgaggacgagcaggtgctgtgcatggccgtggtggagccacagttcgtcatg 221
                 |||||| | ||||||||||||||||||||||||| ||||||||||| ||||| ||||||
Sbjct: 27251318 tgcgttggccaggacgagcaggtgctgtgcatggctgtggtggagccgcagtttgtcatg 27251377

                                                                            
Query: 222      tccgggagtccagaggttctgcttgcagttggcgatcgggtagtggcagttgacgaggat 281
                |||||||| |||||||| |||||||| ||||| ||||| ||  |||| ||||| ||||||
Sbjct: 27251378 tccgggagcccagaggtactgcttgcggttggtgatcgagtgctggcggttgatgaggat 27251437

                                                                            
Query: 282      ggcgtgcaggtgctcggagaggccctggagattggacccgtgcagaaaatggcggtgtca 341
                |  ||||||   |||||   ||  |||||||||||||| |||||||| ||||| || || 
Sbjct: 27251438 gatgtgcagacactcgggttggagctggagattggacctgtgcagaagatggcagtttcc 27251497

                                                                            
Query: 342      ccaaacggaaagctgcttgcagcgtttgcacatgatgggcgcttgctcgtaatccccacg 401
                || || || ||||||||||| || ||||| || ||||||||| ||||||| ||||| |||
Sbjct: 27251498 cccaatgggaagctgcttgccgcatttgcgcacgatgggcgcctgctcgtcatccctacg 27251557

                                                    
Query: 402      gatttctccaggatcatattcgagtatgagtgtgat 437
                |||||||||| ||| || ||||||||||||||||||
Sbjct: 27251558 gatttctccaagataatcttcgagtatgagtgtgat 27251593



 Score =  307 bits (155), Expect = 3e-80
 Identities = 236/263 (89%)
 Strand = Plus / Plus

                                                                            
Query: 441      gcattaccaccggatcaaatagcttggtgtgggttggacagtgtgctcctttactggtct 500
                ||||| ||||| |||||||||||||||||||| |||||||| ||||| ||||||||||| 
Sbjct: 27252175 gcattgccaccagatcaaatagcttggtgtggattggacagcgtgcttctttactggtca 27252234

                                                                            
Query: 501      gaagtgcttttgatggttggacccaatggagatccagtgcaatacaattatgatgaacct 560
                | ||  |||||||||||||| || ||||||||||| ||||  || ||||| |||||||| 
Sbjct: 27252235 gcagctcttttgatggttggtccaaatggagatccggtgctgtataattacgatgaaccc 27252294

                                                                            
Query: 561      gtaatgctcattccagagtgtgatggtgtaagaatcctctcaaattcaagtatggaattt 620
                 ||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||||| 
Sbjct: 27252295 ataaagctcattccagagtgtgatggtgtaagaatcctctcaaactcaaatatggaattc 27252354

                                                                            
Query: 621      ctacaccgagttccagattctactacatcaatttttggcattggaagcatgtctccagca 680
                ||||||||||| || ||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 27252355 ctacaccgagtccctgattccactacatcaatttttggcattggaagcatgtccccagca 27252414

                                       
Query: 681      gcattactgtatgatgctagaga 703
                ||||| |||||||||||||||||
Sbjct: 27252415 gcattgctgtatgatgctagaga 27252437
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>dbj|AP003760.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBb0063G05
          Length = 182681

 Score =  309 bits (156), Expect = 7e-81
 Identities = 336/396 (84%)
 Strand = Plus / Plus

                                                                         
Query: 42    ggcgtcgccgatgctgttttctggggaggcggcgtggctatcctcaccgaggacaaccgc 101
             ||||| ||||| ||||  ||||||||||||||||| ||| ||||||| ||||||||||||
Sbjct: 31715 ggcgttgccgacgctgccttctggggaggcggcgtagctgtcctcacggaggacaaccgc 31774

                                                                         
Query: 102   gtcgtggtcaccaccgacatcgaggtcgacgacccccacccgcgggagctcgccgacccg 161
             |||||||| ||||| |||||||| | ||  ||||| |||||||| ||| |||||||||| 
Sbjct: 31775 gtcgtggtgaccacggacatcgacgccgcggaccctcacccgcgtgagttcgccgaccct 31834

                                                                         
Query: 162   ggcgttgccgaggacgagcaggtgctgtgcatggccgtggtggagccacagttcgtcatg 221
              |||||| | ||||||||||||||||||||||||| ||||||||||| ||||| ||||||
Sbjct: 31835 tgcgttggccaggacgagcaggtgctgtgcatggctgtggtggagccgcagtttgtcatg 31894

                                                                         
Query: 222   tccgggagtccagaggttctgcttgcagttggcgatcgggtagtggcagttgacgaggat 281
             |||||||| |||||||| |||||||| ||||| ||||| ||  |||| ||||| ||||||
Sbjct: 31895 tccgggagcccagaggtactgcttgcggttggtgatcgagtgctggcggttgatgaggat 31954

                                                                         
Query: 282   ggcgtgcaggtgctcggagaggccctggagattggacccgtgcagaaaatggcggtgtca 341
             |  ||||||   |||||   ||  |||||||||||||| |||||||| ||||| || || 
Sbjct: 31955 gatgtgcagacactcgggttggagctggagattggacctgtgcagaagatggcagtttcc 32014

                                                                         
Query: 342   ccaaacggaaagctgcttgcagcgtttgcacatgatgggcgcttgctcgtaatccccacg 401
             || || || ||||||||||| || ||||| || ||||||||| ||||||| ||||| |||
Sbjct: 32015 cccaatgggaagctgcttgccgcatttgcgcacgatgggcgcctgctcgtcatccctacg 32074

                                                 
Query: 402   gatttctccaggatcatattcgagtatgagtgtgat 437
             |||||||||| ||| || ||||||||||||||||||
Sbjct: 32075 gatttctccaagataatcttcgagtatgagtgtgat 32110



 Score =  307 bits (155), Expect = 3e-80
 Identities = 236/263 (89%)
 Strand = Plus / Plus

                                                                         
Query: 441   gcattaccaccggatcaaatagcttggtgtgggttggacagtgtgctcctttactggtct 500
             ||||| ||||| |||||||||||||||||||| |||||||| ||||| ||||||||||| 
Sbjct: 32692 gcattgccaccagatcaaatagcttggtgtggattggacagcgtgcttctttactggtca 32751

                                                                         
Query: 501   gaagtgcttttgatggttggacccaatggagatccagtgcaatacaattatgatgaacct 560
             | ||  |||||||||||||| || ||||||||||| ||||  || ||||| |||||||| 
Sbjct: 32752 gcagctcttttgatggttggtccaaatggagatccggtgctgtataattacgatgaaccc 32811

                                                                         
Query: 561   gtaatgctcattccagagtgtgatggtgtaagaatcctctcaaattcaagtatggaattt 620
              ||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||||| 
Sbjct: 32812 ataaagctcattccagagtgtgatggtgtaagaatcctctcaaactcaaatatggaattc 32871

                                                                         
Query: 621   ctacaccgagttccagattctactacatcaatttttggcattggaagcatgtctccagca 680
             ||||||||||| || ||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 32872 ctacaccgagtccctgattccactacatcaatttttggcattggaagcatgtccccagca 32931

                                    
Query: 681   gcattactgtatgatgctagaga 703
             ||||| |||||||||||||||||
Sbjct: 32932 gcattgctgtatgatgctagaga 32954
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>gb|AC105001.3| Homo sapiens chromosome 8, clone CTD-2135J3, complete sequence
          Length = 157442

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 180   caggtgctgtgcatggccgtggtggagccacagtt 214
             ||||||||||||||||| | | |||||||||||||
Sbjct: 70155 caggtgctgtgcatggctgggctggagccacagtt 70121
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 115     ccgacatcgaggtcgacgaccc 136
               ||||||||||||||||||||||
Sbjct: 5928868 ccgacatcgaggtcgacgaccc 5928847
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>emb|BX005457.10| Zebrafish DNA sequence from clone DKEY-216J10 in linkage group 14,
            complete sequence
          Length = 70896

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 535  cagtgcaatacaattatgatg 555
            |||||||||||||||||||||
Sbjct: 3475 cagtgcaatacaattatgatg 3455
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 537      gtgcaatacaattatgatgaa 557
                |||||||||||||||||||||
Sbjct: 12692353 gtgcaatacaattatgatgaa 12692333
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>gb|AY228175.1|AY228174S2 Streptomyces murayamaensis putative arylamine N-acetyltransferase,
             putative hydrolase, putative transmembrane efflux protein,
             putative transcriptional regulator, putative ribonuclease
             HII, putative ATP-dependent DNA helicase, putative
             bifunctional enzyme deaminase/reductase genes, complete
             cds; kinamycin biosynthetic gene cluster, partial sequence
             and unknown genes
          Length = 34564

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 132   gacccccacccgcgggagctcgccg 156
             |||||||||| ||||||||||||||
Sbjct: 19845 gacccccacctgcgggagctcgccg 19869
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>gb|AC084576.1|CBRG39N24 Caenorhabditis briggsae cosmid G39N24, complete sequence
          Length = 45289

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 601  caaattcaagtatggaatttctacaccga 629
            ||||||| || ||||||||||||||||||
Sbjct: 3992 caaattcgaggatggaatttctacaccga 4020
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>dbj|AP004305.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0492E07
          Length = 143794

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 537   gtgcaatacaattatgatgaa 557
             |||||||||||||||||||||
Sbjct: 66823 gtgcaatacaattatgatgaa 66803
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>ref|NM_196955.1| Oryza sativa (japonica cultivar-group) putative peptide transport
           protein (OSJNBa0079L16.13), mRNA
          Length = 1827

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 127 tcgacgacccccacccgcgggagc 150
           ||||||||| ||||||||||||||
Sbjct: 548 tcgacgaccaccacccgcgggagc 571
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>ref|NM_196736.1| Oryza sativa (japonica cultivar-group) hypothetical protein
            (OSJNBa0094K20.11), mRNA
          Length = 3093

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 292  tgctcggagaggccctggag 311
            ||||||||||||||||||||
Sbjct: 2108 tgctcggagaggccctggag 2089
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>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome
          Length = 943016

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 170    cgaggacgagcaggtgctgt 189
              ||||||||||||||||||||
Sbjct: 148366 cgaggacgagcaggtgctgt 148385
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>gb|AC158164.3| Mus musculus BAC clone RP23-457E24 from chromosome 13, complete
             sequence
          Length = 137550

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 538   tgcaatacaattatgatgaa 557
             ||||||||||||||||||||
Sbjct: 57669 tgcaatacaattatgatgaa 57688
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>gb|AC008324.3| Drosophila melanogaster clone BACR25K01, complete sequence
          Length = 172939

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 416    catattcgagtatgagtgtg 435
              ||||||||||||||||||||
Sbjct: 147029 catattcgagtatgagtgtg 147048
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>gb|AC008325.5| Drosophila melanogaster clone BACR05M06, complete sequence
          Length = 166423

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 416   catattcgagtatgagtgtg 435
             ||||||||||||||||||||
Sbjct: 77194 catattcgagtatgagtgtg 77213
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>ref|XM_359910.1| Magnaporthe grisea 70-15 hypothetical protein (MG04867.4) partial
           mRNA
          Length = 1110

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 100 gcgtcgtggtcaccaccgac 119
           ||||||||||||||||||||
Sbjct: 461 gcgtcgtggtcaccaccgac 480
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>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 240     ctgcttgcagttggcgatcg 259
               ||||||||||||||||||||
Sbjct: 2609593 ctgcttgcagttggcgatcg 2609612
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>gb|AC102228.8| Mus musculus chromosome 13, clone RP24-64M1, complete sequence
          Length = 201286

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 538    tgcaatacaattatgatgaa 557
              ||||||||||||||||||||
Sbjct: 158362 tgcaatacaattatgatgaa 158343
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>tpg|BK003319.1| TPA: TPA_inf: Drosophila melanogaster HDC00897 (HDC00897) gene,
           complete cds
          Length = 1314

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 416 catattcgagtatgagtgtg 435
           ||||||||||||||||||||
Sbjct: 474 catattcgagtatgagtgtg 493
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>gb|AC078911.11| Mus musculus Strain C57BL6/J Chromosome 2 RP23-111A22, complete
             sequence
          Length = 200329

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 178   agcaggtgctgtgcatggcc 197
             ||||||||||||||||||||
Sbjct: 30017 agcaggtgctgtgcatggcc 29998
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>dbj|D88013.1| Rhodococcus erythropolis DNA for hydroxylase   2,3-dihydroxybiphenyl
            1,2-dioxygenase, complete cds
          Length = 4089

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 255  gatcgggtagtggcagttga 274
            ||||||||||||||||||||
Sbjct: 1326 gatcgggtagtggcagttga 1307
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 147     gagctcgccgacccgggcgt 166
               ||||||||||||||||||||
Sbjct: 3861003 gagctcgccgacccgggcgt 3861022
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 127      tcgacgacccccacccgcgggagc 150
                ||||||||| ||||||||||||||
Sbjct: 16904429 tcgacgaccaccacccgcgggagc 16904452



 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 292      tgctcggagaggccctggag 311
                ||||||||||||||||||||
Sbjct: 15614853 tgctcggagaggccctggag 15614834
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>gb|AC025907.2|AC025907 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0094K20,
              complete sequence
          Length = 193119

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 292    tgctcggagaggccctggag 311
              ||||||||||||||||||||
Sbjct: 102219 tgctcggagaggccctggag 102200
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>gb|AC026815.8|AC026815 Oryza sativa chromosome 10 BAC OSJNBa0079L16 genomic sequence, complete
             sequence
          Length = 147452

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 127   tcgacgacccccacccgcgggagc 150
             ||||||||| ||||||||||||||
Sbjct: 88881 tcgacgaccaccacccgcgggagc 88904
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 116     cgacatcgaggtcgacgacc 135
               ||||||||||||||||||||
Sbjct: 4083300 cgacatcgaggtcgacgacc 4083319
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>emb|AL928862.13| Mouse DNA sequence from clone RP23-88J10 on chromosome 2, complete
              sequence
          Length = 143650

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 178    agcaggtgctgtgcatggcc 197
              ||||||||||||||||||||
Sbjct: 117251 agcaggtgctgtgcatggcc 117232
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>gb|AE005060.1| Halobacterium sp. NRC-1 section 91 of 170 of the complete genome
          Length = 10100

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 146  ggagctcgccgacccgggcgttgc 169
            |||||||||||||| |||||||||
Sbjct: 9784 ggagctcgccgaccagggcgttgc 9807
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>ref|XM_321679.2| Anopheles gambiae str. PEST ENSANGP00000015764 (ENSANGG00000013275),
            partial mRNA
          Length = 1195

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 99   cgcgtcgtggtcaccaccga 118
            ||||||||||||||||||||
Sbjct: 1008 cgcgtcgtggtcaccaccga 989
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>dbj|AK101055.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033020K03, full
           insert sequence
          Length = 2106

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 127 tcgacgacccccacccgcgggagc 150
           ||||||||| ||||||||||||||
Sbjct: 686 tcgacgaccaccacccgcgggagc 709
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>emb|BX255920.4| Zebrafish DNA sequence from clone CH211-155K23 in linkage group 20,
             complete sequence
          Length = 92280

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 536   agtgcaatacaattatgatg 555
             ||||||||||||||||||||
Sbjct: 43005 agtgcaatacaattatgatg 43024
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>gb|AE003609.4| Drosophila melanogaster chromosome 2L, section 18 of 83 of the complete
              sequence
          Length = 319287

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 416    catattcgagtatgagtgtg 435
              ||||||||||||||||||||
Sbjct: 187433 catattcgagtatgagtgtg 187452
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>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 116    cgacatcgaggtcgacgacc 135
              ||||||||||||||||||||
Sbjct: 737032 cgacatcgaggtcgacgacc 737013
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 127      tcgacgacccccacccgcgggagc 150
                ||||||||| ||||||||||||||
Sbjct: 16913469 tcgacgaccaccacccgcgggagc 16913492



 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 292      tgctcggagaggccctggag 311
                ||||||||||||||||||||
Sbjct: 15623094 tgctcggagaggccctggag 15623075
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>gb|AC130474.12| Mus musculus chromosome 7, clone RP23-178C20, complete sequence
          Length = 232792

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 563   aatgctcattccagagtgtg 582
             ||||||||||||||||||||
Sbjct: 92404 aatgctcattccagagtgtg 92423
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>gb|AC170913.2| Mus musculus BAC clone RP23-197F6 from chromosome 13, complete sequence
          Length = 199317

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 538   tgcaatacaattatgatgaa 557
             ||||||||||||||||||||
Sbjct: 51971 tgcaatacaattatgatgaa 51952


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,237,625
Number of Sequences: 3902068
Number of extensions: 5237625
Number of successful extensions: 90189
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 89534
Number of HSP's gapped (non-prelim): 655
length of query: 703
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 680
effective length of database: 17,143,297,704
effective search space: 11657442438720
effective search space used: 11657442438720
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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