No.
Definition
Score (bits)
E Value
1 gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence
860
0.0
2 emb|AJ250663.2|HVU250663 Hordeum vulgare partial mRNA for putati...
577
e-161
3 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...
100
9e-18
4 gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome...
100
9e-18
5 emb|AL731742.3|CNS08C7R Oryza sativa chromosome 12, . BAC OJ1123...
100
9e-18
6 gb|BT017006.1| Zea mays clone EK07D2310C10.c mRNA sequence
74
5e-10
7 dbj|AK058739.1| Oryza sativa (japonica cultivar-group) cDNA clon...
66
1e-07
8 gb|BT018918.1| Zea mays clone Contig12.F mRNA sequence
50
0.007
9 gb|AY549626.1| Zea perennis isolate per7b MPI (mpi) gene, comple...
50
0.007
10 gb|AY549625.1| Zea perennis isolate per7a MPI (mpi) gene, comple...
50
0.007
11 gb|AY549624.1| Zea perennis isolate per6 MPI (mpi) gene, complet...
50
0.007
12 gb|AY549623.1| Zea perennis isolate per4d MPI (mpi) gene, comple...
50
0.007
13 gb|AY549622.1| Zea perennis isolate per4c MPI (mpi) gene, comple...
50
0.007
14 gb|AY549621.1| Zea perennis isolate per4b MPI (mpi) gene, comple...
50
0.007
15 gb|AY549619.1| Zea perennis isolate per3c MPI (mpi) gene, comple...
50
0.007
16 gb|AY549618.1| Zea perennis isolate per3b MPI (mpi) gene, comple...
50
0.007
17 gb|AY549617.1| Zea perennis isolate per3a MPI (mpi) gene, comple...
50
0.007
18 gb|AY549616.1| Zea perennis isolate per2c MPI (mpi) gene, comple...
50
0.007
19 gb|AY549614.1| Zea perennis isolate per2a MPI (mpi) gene, comple...
50
0.007
20 gb|AY549612.1| Zea perennis isolate per1b MPI (mpi) gene, comple...
50
0.007
21 gb|AY549599.1| Zea diploperennis isolate d1b MPI (mpi) gene, com...
50
0.007
22 emb|X82187.1|ZMPIS7 Z.mays mRNA for pis7
50
0.007
23 emb|X78988.2|ZMMPI Zea mays MPI gene
50
0.007
24 emb|X69972.1|ZMCIMS Z.mays mRNA for subtilisin-chymotrypsin inhi...
50
0.007
25 dbj|AK121693.1| Oryza sativa (japonica cultivar-group) cDNA clon...
50
0.007
26 dbj|AK063833.1| Oryza sativa (japonica cultivar-group) cDNA clon...
50
0.007
27 gb|AY104061.1| Zea mays PCO087322 mRNA sequence
50
0.007
28 gb|AY878693.1| Oryza sativa (japonica cultivar-group) subitilisi...
50
0.007
29 emb|AL731753.2|CNS08C82 Oryza sativa chromosome 12, . BAC OJ1112...
50
0.007
30 gb|DQ147231.1| Zea mays subsp. parviglumis isolate 11c maize pro...
50
0.007
31 gb|DQ147230.1| Zea mays subsp. parviglumis isolate 11b maize pro...
50
0.007
32 gb|DQ147229.1| Zea mays subsp. parviglumis isolate 10a maize pro...
50
0.007
33 gb|DQ147228.1| Zea mays subsp. parviglumis isolate 10b maize pro...
50
0.007
34 gb|DQ147227.1| Zea mays subsp. parviglumis isolate 9b maize prot...
50
0.007
35 gb|DQ147226.1| Zea mays subsp. parviglumis isolate 9a maize prot...
50
0.007
36 gb|DQ147225.1| Zea mays subsp. parviglumis isolate 8b maize prot...
50
0.007
37 gb|DQ147224.1| Zea mays subsp. parviglumis isolate 7a maize prot...
50
0.007
38 gb|DQ147223.1| Zea mays subsp. parviglumis isolate 6b maize prot...
50
0.007
39 gb|DQ147222.1| Zea mays subsp. parviglumis isolate 5a maize prot...
50
0.007
40 gb|DQ147221.1| Zea mays subsp. parviglumis isolate 5b maize prot...
50
0.007
41 gb|DQ147220.1| Zea mays subsp. parviglumis isolate 4b maize prot...
50
0.007
42 gb|DQ147219.1| Zea mays subsp. parviglumis isolate 4c maize prot...
50
0.007
43 gb|DQ147218.1| Zea mays subsp. parviglumis isolate 3c maize prot...
50
0.007
44 gb|DQ147217.1| Zea mays subsp. parviglumis isolate 3a maize prot...
50
0.007
45 gb|DQ147216.1| Zea mays subsp. parviglumis isolate 2a maize prot...
50
0.007
46 gb|DQ147215.1| Zea mays subsp. parviglumis isolate 1b maize prot...
50
0.007
47 gb|AY549627.1| Tripsacum dactyloides MPI (mpi) gene, complete cds
48
0.029
48 gb|AY424272.1| Brachypodium distachyon ecotype ABR5 serine prote...
48
0.029
49 gb|AY112541.1| Zea mays CL44946_1 mRNA sequence
48
0.029
50 gb|AC108157.3| Homo sapiens BAC clone RP11-580P21 from 4, comple...
44
0.45
51 gb|U51243.1|HSU51243 Human alpha-albumin gene, complete cds
44
0.45
52 gb|M21400.1|BLYCI1A Barley chymotrypsin inhibitor (CI-1A) mRNA, ...
44
0.45
53 gb|AY549620.1| Zea perennis MPI (mpi) gene, complete cds
42
1.8
54 gb|AY549615.1| Zea perennis isolate per2b MPI (mpi) gene, comple...
42
1.8
55 gb|AY549613.1| Zea perennis isolate per1c MPI (mpi) gene, comple...
42
1.8
56 gb|AY549610.1| Zea diploperennis isolate d8b MPI (mpi) gene, com...
42
1.8
57 gb|AY549609.1| Zea diploperennis isolate d8a MPI (mpi) gene, com...
42
1.8
58 gb|AY549608.1| Zea diploperennis isolate d7b MPI (mpi) gene, com...
42
1.8
59 gb|AY549607.1| Zea diploperennis isolate d7a MPI (mpi) gene, com...
42
1.8
60 gb|AY549606.1| Zea diploperennis isolate d6b MPI (mpi) gene, com...
42
1.8
61 gb|AY549605.1| Zea diploperennis isolate d6a MPI (mpi) gene, com...
42
1.8
62 gb|AY549604.1| Zea diploperennis isolate d5b MPI (mpi) gene, com...
42
1.8
63 gb|AY549603.1| Zea diploperennis isolate d5a MPI (mpi) gene, com...
42
1.8
64 gb|AY549602.1| Zea diploperennis isolate d4a MPI (mpi) gene, com...
42
1.8
65 gb|AY549601.1| Zea diploperennis isolate d3a MPI (mpi) gene, com...
42
1.8
66 gb|AY549600.1| Zea diploperennis isolate d2a MPI (mpi) gene, com...
42
1.8
67 gb|AY549598.1| Zea diploperennis isolate d1a MPI (mpi) gene, com...
42
1.8
68 gb|AC166039.6| Mus musculus chromosome 8, clone RP23-285M10, com...
40
7.0
69 ref|XM_369944.1| Magnaporthe grisea 70-15 hypothetical protein (...
40
7.0
70 emb|CT009509.7| Mouse DNA sequence from clone RP23-140C10 on chr...
40
7.0
71 gb|AC161189.11| Mus musculus chromosome 8, clone RP23-337N9, com...
40
7.0
72 ref|XM_537053.2| PREDICTED: Canis familiaris similar to Cofilin-...
40
7.0
73 gb|AC129174.3| Mus musculus BAC clone RP23-63H3 from chromosome ...
40
7.0
74 gb|AC129092.13| Medicago truncatula clone mth2-17n16, complete s...
40
7.0
75 emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete ...
40
7.0
76 emb|AJ581527.1| Fowlpox virus (isolate HP-438[Munich]), passage ...
40
7.0
77 ref|XM_682322.1| PREDICTED: Danio rerio similar to papilin (LOC5...
40
7.0
78 gb|AC147918.2| Xenopus tropicalis clone CH216-8N16, complete seq...
40
7.0
79 gb|AC129197.4| Mus musculus BAC clone RP24-166C17 from chromosom...
40
7.0
80 gb|AC159742.1| Ornithorhynchus anatinus chromosome UNK clone OAB...
40
7.0
81 gb|AF198100.1|AF198100 Fowlpox virus, complete genome
40
7.0
82 gb|AF152393.1|MMTSP4S2 Mus musculus thrombospondin 4 gene, parti...
40
7.0
83 emb|CT573019.12| Mouse DNA sequence from clone RP24-94G12 on chr...
40
7.0
84 gb|AF333038.2| Streptomyces viridochromogenes Avilamycin A biosy...
40
7.0
85 gb|AC166113.3| Mus musculus BAC clone RP23-23E6 from chromosome ...
40
7.0
>gb|AF427791.1 | Hordeum vulgare Mla locus, complete sequence
Length = 261265
Score = 860 bits (434), Expect = 0.0
Identities = 490/511 (95%)
Strand = Plus / Minus
Query: 1 gctcgatcccatttagctggtgattagtcttaagttcccagtcccatatgatttatgtac 60
||||||||||||||||||||||| |||| ||||||||| |||| |||||| ||| |||||
Sbjct: 221006 gctcgatcccatttagctggtgagtagtattaagttcctagtcacatatgctttttgtac 220947
Query: 61 ataaagatttgtagtcttaagtagtctgagctatggttcaactgttattgtcgtctgtag 120
||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||
Sbjct: 220946 ataaagatttgtagtcttaagtagtctgacctatggttcaactgttattgtgatctggag 220887
Query: 121 tctctgaactgaactatttcgatcaannnnnnngcagcctgccgaatcgaggatgagctg 180
|||||||||||||||||||||||||| ||||| || |||||||||||||||||
Sbjct: 220886 tctctgaactgaactatttcgatcaattgttttgcagctcgcggaatcgaggatgagctg 220827
Query: 181 cgccgccccaaaagcccccgccggagaggagaagaagacgtcatggccggaggtagtggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220826 cgccgccccaaaagcccccgccggagaggagaagaagacgtcatggccggaggtagtggg 220767
Query: 241 aaagtccatcgaggaggccaaggagatcatccttaaggacatgcctgaagcggacatcgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220766 aaagtccatcgaggaggccaaggagatcatccttaaggacatgcctgaagcggacatcgt 220707
Query: 301 cgtcctcccagccggctcgccggtgaccctcgacttcaggaccaaccgtgtccgcatctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220706 cgtcctcccagccggctcgccggtgaccctcgacttcaggaccaaccgtgtccgcatctt 220647
Query: 361 cgtcgacactgtcgcgtccactccccacattggctagctagctttgcaagcaaaggcaac 420
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 220646 cgtcgacactgtcgcgtccattccccacattggctagctagctttgcaagcaaaggcaac 220587
Query: 421 atggatgcattgtggatgctgatgaataagtacttccaataagcatggatcaataaatag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220586 atggatgcattgtggatgctgatgaataagtacttccaataagcatggatcaataaatag 220527
Query: 481 atgctgaccaccagcatgctacctgtggatc 511
|||||||||||||||||||||||||||||||
Sbjct: 220526 atgctgaccaccagcatgctacctgtggatc 220496
Score = 176 bits (89), Expect = 5e-41
Identities = 160/186 (86%)
Strand = Plus / Minus
Query: 114 tctgtagtctctgaactgaactatttcgatcaannnnnnngcagcctgccgaatcgagga 173
|||||||||| |||||||||||||||| ||||| ||||| ||||||||||
Sbjct: 217823 tctgtagtctttgaactgaactatttcaatcaattgttttgcagctcaaggaatcgagga 217764
Query: 174 tgagctgcgccgccccaaaagcccccgccggagaggagaagaagacgtcatggccggagg 233
|||||||||| | ||||||||| |||||||| |||||||||||| ||||||||||||||
Sbjct: 217763 tgagctgcgctgacccaaaagcacccgccggtgaggagaagaagtcgtcatggccggagt 217704
Query: 234 tagtgggaaagtccatcgaggaggccaaggagatcatccttaaggacatgcctgaagcgg 293
||||||| |||||||||||||| |||| |||| ||||||| |||||||||||||||| ||
Sbjct: 217703 tagtggggaagtccatcgaggacgccagggaggtcatcctcaaggacatgcctgaagtgg 217644
Query: 294 acatcg 299
||||||
Sbjct: 217643 acatcg 217638
Score = 167 bits (84), Expect = 5e-38
Identities = 180/212 (84%)
Strand = Plus / Minus
Query: 196 ccccgccggagaggagaagaagacgtcatggccggaggtagtgggaaagtccatcgagga 255
||||||||| |||||||||||| |||||||||||||| ||||||| ||||||||||||||
Sbjct: 223976 ccccgccggtgaggagaagaagtcgtcatggccggagttagtggggaagtccatcgagga 223917
Query: 256 ggccaaggagatcatccttaaggacatgcctgaagcggacatcgtcgtcctcccagccgg 315
|||| |||| ||||||| ||||| |||||||||||||||||| |||||||| |||
Sbjct: 223916 cgccagggaggtcatcctcaaggatatgcctgaagcggacatcaaagtcctccccgccaa 223857
Query: 316 ctcgccggtgaccctcgacttcaggaccaaccgtgtccgcatcttcgtcgacactgtcgc 375
||| |||| || |||| |||| ||||||||||||| || | ||||||||||||||
Sbjct: 223856 ctccgtggtggccgcagactggaggagcaaccgtgtccgcgtcctggtcgacactgtcgc 223797
Query: 376 gtccactccccacattggctagctagctttgc 407
| ||||||| ||||| |||||||||| |||||
Sbjct: 223796 gaccactcctcacatcggctagctagatttgc 223765
Score = 123 bits (62), Expect = 6e-25
Identities = 131/154 (85%)
Strand = Plus / Plus
Query: 212 aagaagacgtcatggccggaggtagtgggaaagtccatcgaggaggccaaggagatcatc 271
||||||||||| ||||||||||| || || | ||||| |||||||||||||||||||
Sbjct: 206987 aagaagacgtcttggccggaggtggtcggcctgaccatcaaggaggccaaggagatcatt 207046
Query: 272 cttaaggacatgcctgaagcggacatcgtcgtcctcccagccggctcgccggtgaccctc 331
|| ||||||| ||||||||| |||||||||||| | || | ||||| ||||||||
Sbjct: 207047 ctcaaggacaagcctgaagccgacatcgtcgtcgtgccggttggctcagcggtgaccgaa 207106
Query: 332 gacttcaggaccaaccgtgtccgcatcttcgtcg 365
||||||||| ||||||||||||||||||||||||
Sbjct: 207107 gacttcaggcccaaccgtgtccgcatcttcgtcg 207140
Score = 119 bits (60), Expect = 1e-23
Identities = 102/116 (87%)
Strand = Plus / Minus
Query: 196 ccccgccggagaggagaagaagacgtcatggccggaggtagtgggaaagtccatcgagga 255
||||||||| |||||||||||| |||| ||| ||||| ||||||| ||||||||||||||
Sbjct: 225117 ccccgccggtgaggagaagaagtcgtcctgggcggagttagtggggaagtccatcgagga 225058
Query: 256 ggccaaggagatcatccttaaggacatgcctgaagcggacatcgtcgtcctcccag 311
|||| | || ||||||| |||||||||||||||||||||||| ||||||||||
Sbjct: 225057 cgccaggaaggtcatcctcaaggacatgcctgaagcggacatcaaagtcctcccag 225002
Score = 115 bits (58), Expect = 1e-22
Identities = 61/62 (98%)
Strand = Plus / Minus
Query: 1 gctcgatcccatttagctggtgattagtcttaagttcccagtcccatatgatttatgtac 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 218465 gctcgatcccatttagctggtgagtagtcttaagttcccagtcccatatgatttatgtac 218406
Query: 61 at 62
||
Sbjct: 218405 at 218404
Score = 83.8 bits (42), Expect = 5e-13
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 338 aggaccaaccgtgtccgcatcttcgtcgacactgtcgcgtccactccccacattggctag 397
|||| |||||||||||||||| |||| |||||||||||| ||||||| ||||| ||||||
Sbjct: 217599 aggagcaaccgtgtccgcatcctcgttgacactgtcgcgaccactcctcacatcggctag 217540
Query: 398 ctagct 403
||||||
Sbjct: 217539 ctagct 217534
>dbj|AP008218.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
sequence
Length = 27566993
Score = 99.6 bits (50), Expect = 9e-18
Identities = 134/162 (82%)
Strand = Plus / Minus
Query: 214 gaagacgtcatggccggaggtagtgggaaagtccatcgaggaggccaaggagatcatcct 273
||||||||| ||||||||||| ||||| ||| |||||||| ||| || | |||||
Sbjct: 22227438 gaagacgtcgtggccggaggtggtggggctgtcggcggaggaggcgaagaaggtgatcct 22227379
Query: 274 taaggacatgcctgaagcggacatcgtcgtcctcccagccggctcgccggtgaccctcga 333
||||||||||| || || ||||||||||| || || || || |||||||||||||||||
Sbjct: 22227378 caaggacatgcccgacgccgacatcgtcgtgcttccggcggggtcgccggtgaccctcga 22227319
Query: 334 cttcaggaccaaccgtgtccgcatcttcgtcgacactgtcgc 375
|||| | ||||||| |||||||||||||| ||||| |||||
Sbjct: 22227318 cttccgctccaaccgcgtccgcatcttcgttgacaccgtcgc 22227277
Score = 65.9 bits (33), Expect = 1e-07
Identities = 102/125 (81%)
Strand = Plus / Minus
Query: 251 gaggaggccaaggagatcatccttaaggacatgcctgaagcggacatcgtcgtcctccca 310
|||||||| ||| || | ||||| ||||||||||| || || ||||||||||| | ||
Sbjct: 22236734 gaggaggcgaagaaggtgatcctcaaggacatgcccgacgccgacatcgtcgtggttccg 22236675
Query: 311 gccggctcgccggtgaccctcgacttcaggaccaaccgtgtccgcatcttcgtcgacact 370
| || ||||||||||| | |||||| | ||||||| ||||||||||||||||||||
Sbjct: 22236674 gtggggacgccggtgaccatggacttccgccccaaccgcgtccgcatcttcgtcgacacc 22236615
Query: 371 gtcgc 375
|||||
Sbjct: 22236614 gtcgc 22236610
Score = 58.0 bits (29), Expect = 3e-05
Identities = 132/166 (79%), Gaps = 4/166 (2%)
Strand = Plus / Minus
Query: 214 gaagacgtcatggccggaggtagtgggaaagtccatcgaggaggccaaggagatcatcct 273
||||||||| ||||||||||| ||||| | | | |||||||| ||| || | |||||
Sbjct: 22232067 gaagacgtcgtggccggaggtggtggggctgccggtggaggaggcgaagaaggtgatcct 22232008
Query: 274 taaggacatgcctgaagcggacatcgtcgtcctcccagccggctcgccgg----tgaccc 329
||||||||||| || || ||||||||||| || || || || ||||||| |||||
Sbjct: 22232007 caaggacatgcccgacgccgacatcgtcgtgcttccggcggggtcgccggccggtgacca 22231948
Query: 330 tcgacttcaggaccaaccgtgtccgcatcttcgtcgacactgtcgc 375
|||||| | ||||||| |||||||||||||||||||| |||||
Sbjct: 22231947 aggacttccgccccaaccgcgtccgcatcttcgtcgacaccgtcgc 22231902
Score = 50.1 bits (25), Expect = 0.007
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 343 caaccgtgtccgcatcttcgtcgacactgtcgc 375
|||||||||||| |||||||||||||| |||||
Sbjct: 14455912 caaccgtgtccgaatcttcgtcgacaccgtcgc 14455880
>gb|DP000011.1 | Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
Length = 27492551
Score = 99.6 bits (50), Expect = 9e-18
Identities = 134/162 (82%)
Strand = Plus / Minus
Query: 214 gaagacgtcatggccggaggtagtgggaaagtccatcgaggaggccaaggagatcatcct 273
||||||||| ||||||||||| ||||| ||| |||||||| ||| || | |||||
Sbjct: 22155783 gaagacgtcgtggccggaggtggtggggctgtcggcggaggaggcgaagaaggtgatcct 22155724
Query: 274 taaggacatgcctgaagcggacatcgtcgtcctcccagccggctcgccggtgaccctcga 333
||||||||||| || || ||||||||||| || || || || |||||||||||||||||
Sbjct: 22155723 caaggacatgcccgacgccgacatcgtcgtgcttccggcggggtcgccggtgaccctcga 22155664
Query: 334 cttcaggaccaaccgtgtccgcatcttcgtcgacactgtcgc 375
|||| | ||||||| |||||||||||||| ||||| |||||
Sbjct: 22155663 cttccgctccaaccgcgtccgcatcttcgttgacaccgtcgc 22155622
Score = 65.9 bits (33), Expect = 1e-07
Identities = 102/125 (81%)
Strand = Plus / Minus
Query: 251 gaggaggccaaggagatcatccttaaggacatgcctgaagcggacatcgtcgtcctccca 310
|||||||| ||| || | ||||| ||||||||||| || || ||||||||||| | ||
Sbjct: 22165079 gaggaggcgaagaaggtgatcctcaaggacatgcccgacgccgacatcgtcgtggttccg 22165020
Query: 311 gccggctcgccggtgaccctcgacttcaggaccaaccgtgtccgcatcttcgtcgacact 370
| || ||||||||||| | |||||| | ||||||| ||||||||||||||||||||
Sbjct: 22165019 gtggggacgccggtgaccatggacttccgccccaaccgcgtccgcatcttcgtcgacacc 22164960
Query: 371 gtcgc 375
|||||
Sbjct: 22164959 gtcgc 22164955
Score = 58.0 bits (29), Expect = 3e-05
Identities = 132/166 (79%), Gaps = 4/166 (2%)
Strand = Plus / Minus
Query: 214 gaagacgtcatggccggaggtagtgggaaagtccatcgaggaggccaaggagatcatcct 273
||||||||| ||||||||||| ||||| | | | |||||||| ||| || | |||||
Sbjct: 22160412 gaagacgtcgtggccggaggtggtggggctgccggtggaggaggcgaagaaggtgatcct 22160353
Query: 274 taaggacatgcctgaagcggacatcgtcgtcctcccagccggctcgccgg----tgaccc 329
||||||||||| || || ||||||||||| || || || || ||||||| |||||
Sbjct: 22160352 caaggacatgcccgacgccgacatcgtcgtgcttccggcggggtcgccggccggtgacca 22160293
Query: 330 tcgacttcaggaccaaccgtgtccgcatcttcgtcgacactgtcgc 375
|||||| | ||||||| |||||||||||||||||||| |||||
Sbjct: 22160292 aggacttccgccccaaccgcgtccgcatcttcgtcgacaccgtcgc 22160247
Score = 50.1 bits (25), Expect = 0.007
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 343 caaccgtgtccgcatcttcgtcgacactgtcgc 375
|||||||||||| |||||||||||||| |||||
Sbjct: 14410196 caaccgtgtccgaatcttcgtcgacaccgtcgc 14410164
>emb|AL731742.3 |CNS08C7R Oryza sativa chromosome 12, . BAC OJ1123_B09 of library Monsanto from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 155585
Score = 99.6 bits (50), Expect = 9e-18
Identities = 134/162 (82%)
Strand = Plus / Plus
Query: 214 gaagacgtcatggccggaggtagtgggaaagtccatcgaggaggccaaggagatcatcct 273
||||||||| ||||||||||| ||||| ||| |||||||| ||| || | |||||
Sbjct: 25572 gaagacgtcgtggccggaggtggtggggctgtcggcggaggaggcgaagaaggtgatcct 25631
Query: 274 taaggacatgcctgaagcggacatcgtcgtcctcccagccggctcgccggtgaccctcga 333
||||||||||| || || ||||||||||| || || || || |||||||||||||||||
Sbjct: 25632 caaggacatgcccgacgccgacatcgtcgtgcttccggcggggtcgccggtgaccctcga 25691
Query: 334 cttcaggaccaaccgtgtccgcatcttcgtcgacactgtcgc 375
|||| | ||||||| |||||||||||||| ||||| |||||
Sbjct: 25692 cttccgctccaaccgcgtccgcatcttcgttgacaccgtcgc 25733
Score = 65.9 bits (33), Expect = 1e-07
Identities = 102/125 (81%)
Strand = Plus / Plus
Query: 251 gaggaggccaaggagatcatccttaaggacatgcctgaagcggacatcgtcgtcctccca 310
|||||||| ||| || | ||||| ||||||||||| || || ||||||||||| | ||
Sbjct: 16276 gaggaggcgaagaaggtgatcctcaaggacatgcccgacgccgacatcgtcgtggttccg 16335
Query: 311 gccggctcgccggtgaccctcgacttcaggaccaaccgtgtccgcatcttcgtcgacact 370
| || ||||||||||| | |||||| | ||||||| ||||||||||||||||||||
Sbjct: 16336 gtggggacgccggtgaccatggacttccgccccaaccgcgtccgcatcttcgtcgacacc 16395
Query: 371 gtcgc 375
|||||
Sbjct: 16396 gtcgc 16400
Score = 58.0 bits (29), Expect = 3e-05
Identities = 132/166 (79%), Gaps = 4/166 (2%)
Strand = Plus / Plus
Query: 214 gaagacgtcatggccggaggtagtgggaaagtccatcgaggaggccaaggagatcatcct 273
||||||||| ||||||||||| ||||| | | | |||||||| ||| || | |||||
Sbjct: 20943 gaagacgtcgtggccggaggtggtggggctgccggtggaggaggcgaagaaggtgatcct 21002
Query: 274 taaggacatgcctgaagcggacatcgtcgtcctcccagccggctcgccgg----tgaccc 329
||||||||||| || || ||||||||||| || || || || ||||||| |||||
Sbjct: 21003 caaggacatgcccgacgccgacatcgtcgtgcttccggcggggtcgccggccggtgacca 21062
Query: 330 tcgacttcaggaccaaccgtgtccgcatcttcgtcgacactgtcgc 375
|||||| | ||||||| |||||||||||||||||||| |||||
Sbjct: 21063 aggacttccgccccaaccgcgtccgcatcttcgtcgacaccgtcgc 21108
>gb|AC166113.3 | Mus musculus BAC clone RP23-23E6 from chromosome 14, complete sequence
Length = 252394
Score = 40.1 bits (20), Expect = 7.0
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 254 gaggccaaggagatcatccttaaggaca 281
||||||||| ||| ||||||||||||||
Sbjct: 98517 gaggccaagcagaacatccttaaggaca 98490
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,110,249
Number of Sequences: 3902068
Number of extensions: 4110249
Number of successful extensions: 78386
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78045
Number of HSP's gapped (non-prelim): 339
length of query: 521
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 498
effective length of database: 17,143,297,704
effective search space: 8537362256592
effective search space used: 8537362256592
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)