ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd18f13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_468783.1| Oryza sativa (japonica cultivar-group), mRNA 644 0.0
2gb|AY109424.1| Zea mays CL2020_2 mRNA sequence 204 2e-49
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 163 8e-37
4gb|AC133398.4| Oryza sativa chromosome 3 BAC OSJNBa0083F15 genom... 163 8e-37
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 163 8e-37
6ref|NM_121544.2| Arabidopsis thaliana ubiquitin-protein ligase A... 101 3e-18
7gb|AY050458.1| Arabidopsis thaliana AT5g15400/T20K14_10 mRNA, co... 101 3e-18
8emb|BX832575.1|CNS0A1OG Arabidopsis thaliana Full-length cDNA Co... 66 1e-07
9emb|AL391143.1|ATT20K14 Arabidopsis thaliana DNA chromosome 5, B... 64 6e-07
10emb|AL353993.1|ATF8M21 Arabidopsis thaliana DNA chromosome 5, BA... 64 6e-07
11gb|AC107447.5| Rattus norvegicus 4 BAC CH230-46D21 (Children's H... 46 0.13
12gb|AC068945.7| Homo sapiens BAC clone RP11-789C1 from 4, complet... 44 0.52
13emb|AJ617120.1| Nicotiana plumbaginifolia cDNA-AFLP fragment, cl... 44 0.52
14gb|AC158497.2| Medicago truncatula chromosome 2 BAC clone mth2-4... 44 0.52
15gb|U13019.1| Caenorhabditis elegans cosmid T12A2, complete sequence 42 2.1
16ref|XM_387561.1| Gibberella zeae PH-1 chromosome 4 hypothetical ... 42 2.1
17emb|AL611949.12| Mouse DNA sequence from clone RP23-454F13 on ch... 42 2.1
18ref|NM_179356.1| Arabidopsis thaliana ATP-dependent peptidase/ u... 40 8.2
19ref|NM_179357.1| Arabidopsis thaliana ATP-dependent peptidase/ u... 40 8.2
20ref|NM_101724.2| Arabidopsis thaliana ATP-dependent peptidase/ u... 40 8.2
21ref|NM_202130.1| Arabidopsis thaliana ATP-dependent peptidase/ u... 40 8.2
22gb|BT017585.1| Zea mays clone EL01N0430A01.c mRNA sequence 40 8.2
23gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 40 8.2
24gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 8.2
25ref|XM_954578.1| Neurospora crassa OR74A hypothetical protein (N... 40 8.2
26ref|XM_328833.1| Neurospora crassa OR74A hypothetical protein (N... 40 8.2
27gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 8.2
28gb|AC124710.4| Mus musculus BAC clone RP24-92A2 from chromosome ... 40 8.2
29gb|AC011809.2| Arabidopsis thaliana chromosome I BAC F6A14 genom... 40 8.2
30gb|AC098587.5| Homo sapiens BAC clone RP11-231C18 from 4, comple... 40 8.2
31gb|AC101663.10| Mus musculus chromosome 1, clone RP23-37L1, comp... 40 8.2
32emb|AL591424.12| Human DNA sequence from clone RP11-424E7 on chr... 40 8.2
33emb|AL034405.16|HS537K23 Human DNA sequence from clone RP4-537K2... 40 8.2
34emb|CR548612.1| Paramecium tetraurelia macronuclear largest chro... 40 8.2
35emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 8.2
36emb|BX005348.9| Zebrafish DNA sequence from clone DKEY-245J21 in... 40 8.2
37emb|BX323548.11| Zebrafish DNA sequence from clone DKEY-31D5 in ... 40 8.2
38gb|AC096717.3| Homo sapiens BAC clone RP11-10O3 from 4, complete... 40 8.2
39gb|AC092134.4| Homo sapiens chromosome 16 clone RP11-264M12, com... 40 8.2
40gb|AC091619.3| Papio anubis clone RP41-139B7, complete sequence 40 8.2
41gb|AF169181.1|AF169181 Oryctolagus cuniculus interleukin 10 vari... 40 8.2
42gb|AF068058.1|AF068058 Oryctolagus cuniculus interleukin-10 mRNA... 40 8.2
43emb|AL590633.9| Mouse DNA sequence from clone RP23-211O23 on chr... 40 8.2
44gb|BT001981.1| Arabidopsis thaliana expressed protein (At1g18660... 40 8.2
45emb|BX842692.18| Zebrafish DNA sequence from clone DKEY-71H2 in ... 40 8.2
46dbj|AP002963.3| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 8.2
47gb|DQ304490.1| Oryctolagus cuniculus interleukin-10 (IL-10) mRNA... 40 8.2
48gb|AF088887.1|AF088887 Oryctolagus cuniculus interleukin-10 prec... 40 8.2
49gb|AC165413.16| Mus musculus chromosome 1, clone RP23-242C11, co... 40 8.2
50dbj|D84217.1| Rabbit mRNA for interleukin-10, partial cds 40 8.2

>ref|XM_468783.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3371

 Score =  644 bits (325), Expect = 0.0
 Identities = 532/601 (88%)
 Strand = Plus / Plus

                                                                        
Query: 1    tggttgaagttttgaaaagctggatgccgcaaagaagaggcttgaaatccacagcctcgt 60
            ||||||||||||||||  |||||||||| |||||||| || ||||  || |||||||| |
Sbjct: 1934 tggttgaagttttgaattgctggatgccacaaagaagtgggttgagttctacagcctcat 1993

                                                                        
Query: 61   tatttgaggggcaccaactatgtctcgattatcttgtcaagaatcttctaaagctttatg 120
            ||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||
Sbjct: 1994 tatttgaggggcaccaactatgtctcgattacctggtcaaaaatcttctaaagctttatg 2053

                                                                        
Query: 121  tggatattgaattcactggctcccatacacaattctttgacaagtttaatattcgacaca 180
            ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |
Sbjct: 2054 tggatattgaattcactggttcccatacacaattctttgacaagtttaacattcgacata 2113

                                                                        
Query: 181  acattgctgagcttcttgagtatttatgggatgttcccagtcatcgaaatgcttggagac 240
            | |||||||||||||| |||||| |||||||||| ||||||||||| ||||| |||||||
Sbjct: 2114 atattgctgagcttctagagtatctatgggatgtccccagtcatcggaatgcatggagac 2173

                                                                        
Query: 241  aaatggctaaacaagaggaaaagggcgtctacttgaattttctgaacttccttatcaatg 300
             ||| |||||| | ||||| |||||||| || || |||||| ||||||||||||||||||
Sbjct: 2174 gaatagctaaagaggaggagaagggcgtatatttaaattttttgaacttccttatcaatg 2233

                                                                        
Query: 301  atagcatctatcttcttgatgagagtttgaaaaggattctcgagctaaaggaaatagagg 360
            ||||||||||||||||||||||||||||||| |  || ||||| || || ||||||||||
Sbjct: 2234 atagcatctatcttcttgatgagagtttgaacaaaatcctcgaactgaaagaaatagagg 2293

                                                                        
Query: 361  ctgaaatggctaatactgttgcatgggagagcagacctgctgaagaaagagaggagcggt 420
            ||||||||||||||  ||| |  ||||| ||||| ||  || |||||||||||||| | |
Sbjct: 2294 ctgaaatggctaatgttgtagagtgggaaagcaggccacctcaagaaagagaggagagat 2353

                                                                        
Query: 421  tgcgcgcgtttcatcagtcagagaatattgctcgatttgatatgaagctcgcaaatgagg 480
            |||| |  ||||||||||  |||||| ||| ||||||||| |||||||| ||||||||||
Sbjct: 2354 tgcgtgtatttcatcagtgggagaatgttgttcgatttgacatgaagctagcaaatgagg 2413

                                                                        
Query: 481  atgttgggatgcttgcttttacttcagaacaaattccagcacctttgcttcttccagaaa 540
            ||||||||||||||||||| || ||||| || |||||||||||||| || ||||| ||||
Sbjct: 2414 atgttgggatgcttgctttcacgtcagagcagattccagcacctttcctccttcctgaaa 2473

                                                                        
Query: 541  tggtggaaagggtggcgagcatgttaaattacttcctcttgcagcttgctggtccccaga 600
            |||||||||||||||| |||||| ||||||||||||||||||| ||||||||||| ||||
Sbjct: 2474 tggtggaaagggtggcaagcatgctaaattacttcctcttgcaacttgctggtcctcaga 2533

             
Query: 601  g 601
            |
Sbjct: 2534 g 2534



to top

>gb|AY109424.1| Zea mays CL2020_2 mRNA sequence
          Length = 1022

 Score =  204 bits (103), Expect = 2e-49
 Identities = 184/211 (87%)
 Strand = Plus / Plus

                                                                       
Query: 391 gcagacctgctgaagaaagagaggagcggttgcgcgcgtttcatcagtcagagaatattg 450
           ||||||||||| ||||||||||||||||| | || |  |||||||| |  || |||||||
Sbjct: 3   gcagacctgctcaagaaagagaggagcggctccgtgtatttcatcaatgggaaaatattg 62

                                                                       
Query: 451 ctcgatttgatatgaagctcgcaaatgaggatgttgggatgcttgcttttacttcagaac 510
            ||||||||| |||| ||| || ||||||||||||||||||||||| || || || ||||
Sbjct: 63  ttcgatttgacatgaggctagccaatgaggatgttgggatgcttgcattcacctcggaac 122

                                                                       
Query: 511 aaattccagcacctttgcttcttccagaaatggtggaaagggtggcgagcatgttaaatt 570
           |||||||||||||||| ||||| || ||||||||||||||||| ||||||||| | ||||
Sbjct: 123 aaattccagcacctttccttctccctgaaatggtggaaagggtcgcgagcatgcttaatt 182

                                          
Query: 571 acttcctcttgcagcttgctggtccccagag 601
           ||||||||||||| ||||||||||| |||||
Sbjct: 183 acttcctcttgcaacttgctggtcctcagag 213



to top

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  163 bits (82), Expect = 8e-37
 Identities = 97/102 (95%)
 Strand = Plus / Plus

                                                                            
Query: 51       acagcctcgttatttgaggggcaccaactatgtctcgattatcttgtcaagaatcttcta 110
                |||||||| |||||||||||||||||||||||||||||||| || ||||| |||||||||
Sbjct: 17701550 acagcctcattatttgaggggcaccaactatgtctcgattacctggtcaaaaatcttcta 17701609

                                                          
Query: 111      aagctttatgtggatattgaattcactggctcccatacacaa 152
                ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 17701610 aagctttatgtggatattgaattcactggttcccatacacaa 17701651



 Score =  153 bits (77), Expect = 8e-34
 Identities = 164/193 (84%)
 Strand = Plus / Plus

                                                                            
Query: 246      gctaaacaagaggaaaagggcgtctacttgaattttctgaacttccttatcaatgatagc 305
                |||||| | ||||| |||||||| || || |||||| |||||||||||||||||||||||
Sbjct: 17701925 gctaaagaggaggagaagggcgtatatttaaattttttgaacttccttatcaatgatagc 17701984

                                                                            
Query: 306      atctatcttcttgatgagagtttgaaaaggattctcgagctaaaggaaatagaggctgaa 365
                |||||||||||||||||||||||||| |  || ||||| || || |||||||||||||||
Sbjct: 17701985 atctatcttcttgatgagagtttgaacaaaatcctcgaactgaaagaaatagaggctgaa 17702044

                                                                            
Query: 366      atggctaatactgttgcatgggagagcagacctgctgaagaaagagaggagcggttgcgc 425
                |||||||||  ||| |  ||||| ||||| ||  || |||||||||||||| | ||||| 
Sbjct: 17702045 atggctaatgttgtagagtgggaaagcaggccacctcaagaaagagaggagagattgcgt 17702104

                             
Query: 426      gcgtttcatcagt 438
                |  ||||||||||
Sbjct: 17702105 gtatttcatcagt 17702117



 Score =  113 bits (57), Expect = 7e-22
 Identities = 84/93 (90%)
 Strand = Plus / Plus

                                                                            
Query: 452      tcgatttgatatgaagctcgcaaatgaggatgttgggatgcttgcttttacttcagaaca 511
                ||||||||| |||||||| ||||||||||||||||||||||||||||| || ||||| ||
Sbjct: 17702228 tcgatttgacatgaagctagcaaatgaggatgttgggatgcttgctttcacgtcagagca 17702287

                                                 
Query: 512      aattccagcacctttgcttcttccagaaatggt 544
                 |||||||||||||| || ||||| ||||||||
Sbjct: 17702288 gattccagcacctttcctccttcctgaaatggt 17702320



 Score =  111 bits (56), Expect = 3e-21
 Identities = 80/88 (90%)
 Strand = Plus / Plus

                                                                            
Query: 153      ttctttgacaagtttaatattcgacacaacattgctgagcttcttgagtatttatgggat 212
                ||||||||||||||||| |||||||| || |||||||||||||| |||||| ||||||||
Sbjct: 17701752 ttctttgacaagtttaacattcgacataatattgctgagcttctagagtatctatgggat 17701811

                                            
Query: 213      gttcccagtcatcgaaatgcttggagac 240
                || ||||||||||| ||||| |||||||
Sbjct: 17701812 gtccccagtcatcggaatgcatggagac 17701839



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 56/60 (93%)
 Strand = Plus / Plus

                                                                            
Query: 542      ggtggaaagggtggcgagcatgttaaattacttcctcttgcagcttgctggtccccagag 601
                ||||||||||||||| |||||| ||||||||||||||||||| ||||||||||| |||||
Sbjct: 17702552 ggtggaaagggtggcaagcatgctaaattacttcctcttgcaacttgctggtcctcagag 17702611



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                     
Query: 1        tggttgaagttttgaaaagctggatgccgcaaagaag 37
                ||||||||||||||||  |||||||||| ||||||||
Sbjct: 17701410 tggttgaagttttgaattgctggatgccacaaagaag 17701446



to top

>gb|AC133398.4| Oryza sativa chromosome 3 BAC OSJNBa0083F15 genomic sequence, complete
             sequence
          Length = 136916

 Score =  163 bits (82), Expect = 8e-37
 Identities = 97/102 (95%)
 Strand = Plus / Minus

                                                                         
Query: 51    acagcctcgttatttgaggggcaccaactatgtctcgattatcttgtcaagaatcttcta 110
             |||||||| |||||||||||||||||||||||||||||||| || ||||| |||||||||
Sbjct: 82457 acagcctcattatttgaggggcaccaactatgtctcgattacctggtcaaaaatcttcta 82398

                                                       
Query: 111   aagctttatgtggatattgaattcactggctcccatacacaa 152
             ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 82397 aagctttatgtggatattgaattcactggttcccatacacaa 82356



 Score =  153 bits (77), Expect = 8e-34
 Identities = 164/193 (84%)
 Strand = Plus / Minus

                                                                         
Query: 246   gctaaacaagaggaaaagggcgtctacttgaattttctgaacttccttatcaatgatagc 305
             |||||| | ||||| |||||||| || || |||||| |||||||||||||||||||||||
Sbjct: 82082 gctaaagaggaggagaagggcgtatatttaaattttttgaacttccttatcaatgatagc 82023

                                                                         
Query: 306   atctatcttcttgatgagagtttgaaaaggattctcgagctaaaggaaatagaggctgaa 365
             |||||||||||||||||||||||||| |  || ||||| || || |||||||||||||||
Sbjct: 82022 atctatcttcttgatgagagtttgaacaaaatcctcgaactgaaagaaatagaggctgaa 81963

                                                                         
Query: 366   atggctaatactgttgcatgggagagcagacctgctgaagaaagagaggagcggttgcgc 425
             |||||||||  ||| |  ||||| ||||| ||  || |||||||||||||| | ||||| 
Sbjct: 81962 atggctaatgttgtagagtgggaaagcaggccacctcaagaaagagaggagagattgcgt 81903

                          
Query: 426   gcgtttcatcagt 438
             |  ||||||||||
Sbjct: 81902 gtatttcatcagt 81890



 Score =  113 bits (57), Expect = 7e-22
 Identities = 84/93 (90%)
 Strand = Plus / Minus

                                                                         
Query: 452   tcgatttgatatgaagctcgcaaatgaggatgttgggatgcttgcttttacttcagaaca 511
             ||||||||| |||||||| ||||||||||||||||||||||||||||| || ||||| ||
Sbjct: 81779 tcgatttgacatgaagctagcaaatgaggatgttgggatgcttgctttcacgtcagagca 81720

                                              
Query: 512   aattccagcacctttgcttcttccagaaatggt 544
              |||||||||||||| || ||||| ||||||||
Sbjct: 81719 gattccagcacctttcctccttcctgaaatggt 81687



 Score =  111 bits (56), Expect = 3e-21
 Identities = 80/88 (90%)
 Strand = Plus / Minus

                                                                         
Query: 153   ttctttgacaagtttaatattcgacacaacattgctgagcttcttgagtatttatgggat 212
             ||||||||||||||||| |||||||| || |||||||||||||| |||||| ||||||||
Sbjct: 82255 ttctttgacaagtttaacattcgacataatattgctgagcttctagagtatctatgggat 82196

                                         
Query: 213   gttcccagtcatcgaaatgcttggagac 240
             || ||||||||||| ||||| |||||||
Sbjct: 82195 gtccccagtcatcggaatgcatggagac 82168



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 56/60 (93%)
 Strand = Plus / Minus

                                                                         
Query: 542   ggtggaaagggtggcgagcatgttaaattacttcctcttgcagcttgctggtccccagag 601
             ||||||||||||||| |||||| ||||||||||||||||||| ||||||||||| |||||
Sbjct: 81455 ggtggaaagggtggcaagcatgctaaattacttcctcttgcaacttgctggtcctcagag 81396



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                  
Query: 1     tggttgaagttttgaaaagctggatgccgcaaagaag 37
             ||||||||||||||||  |||||||||| ||||||||
Sbjct: 82597 tggttgaagttttgaattgctggatgccacaaagaag 82561



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  163 bits (82), Expect = 8e-37
 Identities = 97/102 (95%)
 Strand = Plus / Plus

                                                                            
Query: 51       acagcctcgttatttgaggggcaccaactatgtctcgattatcttgtcaagaatcttcta 110
                |||||||| |||||||||||||||||||||||||||||||| || ||||| |||||||||
Sbjct: 17695091 acagcctcattatttgaggggcaccaactatgtctcgattacctggtcaaaaatcttcta 17695150

                                                          
Query: 111      aagctttatgtggatattgaattcactggctcccatacacaa 152
                ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 17695151 aagctttatgtggatattgaattcactggttcccatacacaa 17695192



 Score =  153 bits (77), Expect = 8e-34
 Identities = 164/193 (84%)
 Strand = Plus / Plus

                                                                            
Query: 246      gctaaacaagaggaaaagggcgtctacttgaattttctgaacttccttatcaatgatagc 305
                |||||| | ||||| |||||||| || || |||||| |||||||||||||||||||||||
Sbjct: 17695466 gctaaagaggaggagaagggcgtatatttaaattttttgaacttccttatcaatgatagc 17695525

                                                                            
Query: 306      atctatcttcttgatgagagtttgaaaaggattctcgagctaaaggaaatagaggctgaa 365
                |||||||||||||||||||||||||| |  || ||||| || || |||||||||||||||
Sbjct: 17695526 atctatcttcttgatgagagtttgaacaaaatcctcgaactgaaagaaatagaggctgaa 17695585

                                                                            
Query: 366      atggctaatactgttgcatgggagagcagacctgctgaagaaagagaggagcggttgcgc 425
                |||||||||  ||| |  ||||| ||||| ||  || |||||||||||||| | ||||| 
Sbjct: 17695586 atggctaatgttgtagagtgggaaagcaggccacctcaagaaagagaggagagattgcgt 17695645

                             
Query: 426      gcgtttcatcagt 438
                |  ||||||||||
Sbjct: 17695646 gtatttcatcagt 17695658



 Score =  113 bits (57), Expect = 7e-22
 Identities = 84/93 (90%)
 Strand = Plus / Plus

                                                                            
Query: 452      tcgatttgatatgaagctcgcaaatgaggatgttgggatgcttgcttttacttcagaaca 511
                ||||||||| |||||||| ||||||||||||||||||||||||||||| || ||||| ||
Sbjct: 17695769 tcgatttgacatgaagctagcaaatgaggatgttgggatgcttgctttcacgtcagagca 17695828

                                                 
Query: 512      aattccagcacctttgcttcttccagaaatggt 544
                 |||||||||||||| || ||||| ||||||||
Sbjct: 17695829 gattccagcacctttcctccttcctgaaatggt 17695861



 Score =  111 bits (56), Expect = 3e-21
 Identities = 80/88 (90%)
 Strand = Plus / Plus

                                                                            
Query: 153      ttctttgacaagtttaatattcgacacaacattgctgagcttcttgagtatttatgggat 212
                ||||||||||||||||| |||||||| || |||||||||||||| |||||| ||||||||
Sbjct: 17695293 ttctttgacaagtttaacattcgacataatattgctgagcttctagagtatctatgggat 17695352

                                            
Query: 213      gttcccagtcatcgaaatgcttggagac 240
                || ||||||||||| ||||| |||||||
Sbjct: 17695353 gtccccagtcatcggaatgcatggagac 17695380



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 56/60 (93%)
 Strand = Plus / Plus

                                                                            
Query: 542      ggtggaaagggtggcgagcatgttaaattacttcctcttgcagcttgctggtccccagag 601
                ||||||||||||||| |||||| ||||||||||||||||||| ||||||||||| |||||
Sbjct: 17696093 ggtggaaagggtggcaagcatgctaaattacttcctcttgcaacttgctggtcctcagag 17696152



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                     
Query: 1        tggttgaagttttgaaaagctggatgccgcaaagaag 37
                ||||||||||||||||  |||||||||| ||||||||
Sbjct: 17694951 tggttgaagttttgaattgctggatgccacaaagaag 17694987



to top

>ref|NM_121544.2| Arabidopsis thaliana ubiquitin-protein ligase AT5G15400 mRNA,
            complete cds
          Length = 3401

 Score =  101 bits (51), Expect = 3e-18
 Identities = 192/239 (80%)
 Strand = Plus / Plus

                                                                        
Query: 84   ctcgattatcttgtcaagaatcttctaaagctttatgtggatattgaattcactggctcc 143
            ||||| |||||||||| |||| | || || || ||||| || ||||| ||||| || || 
Sbjct: 2244 ctcgagtatcttgtcaggaatttactgaaactatatgttgacattgagttcacgggttca 2303

                                                                        
Query: 144  catacacaattctttgacaagtttaatattcgacacaacattgctgagcttcttgagtat 203
            || || || |||| ||||||||| |||||||| ||||||||||| |||||| | ||||||
Sbjct: 2304 cacactcagttctatgacaagttcaatattcgccacaacattgccgagcttttagagtat 2363

                                                                        
Query: 204  ttatgggatgttcccagtcatcgaaatgcttggagacaaatggctaaacaagaggaaaag 263
             | ||| | || || ||||| |||||||| |||||||  || || ||| | || || |||
Sbjct: 2364 ctctggcaggtgcctagtcaccgaaatgcatggagacggattgcaaaagacgaagagaag 2423

                                                                       
Query: 264  ggcgtctacttgaattttctgaacttccttatcaatgatagcatctatcttcttgatga 322
            ||||| |||||||| ||  | |||||| |  |||||||||||||||||||||| |||||
Sbjct: 2424 ggcgtgtacttgaacttcttaaacttcttagtcaatgatagcatctatcttctggatga 2482



to top

>gb|AY050458.1| Arabidopsis thaliana AT5g15400/T20K14_10 mRNA, complete sequence
          Length = 3451

 Score =  101 bits (51), Expect = 3e-18
 Identities = 192/239 (80%)
 Strand = Plus / Plus

                                                                        
Query: 84   ctcgattatcttgtcaagaatcttctaaagctttatgtggatattgaattcactggctcc 143
            ||||| |||||||||| |||| | || || || ||||| || ||||| ||||| || || 
Sbjct: 2192 ctcgagtatcttgtcaggaatttactgaaactatatgttgacattgagttcacgggttca 2251

                                                                        
Query: 144  catacacaattctttgacaagtttaatattcgacacaacattgctgagcttcttgagtat 203
            || || || |||| ||||||||| |||||||| ||||||||||| |||||| | ||||||
Sbjct: 2252 cacactcagttctatgacaagttcaatattcgccacaacattgccgagcttttagagtat 2311

                                                                        
Query: 204  ttatgggatgttcccagtcatcgaaatgcttggagacaaatggctaaacaagaggaaaag 263
             | ||| | || || ||||| |||||||| |||||||  || || ||| | || || |||
Sbjct: 2312 ctctggcaggtgcctagtcaccgaaatgcatggagacggattgcaaaagacgaagagaag 2371

                                                                       
Query: 264  ggcgtctacttgaattttctgaacttccttatcaatgatagcatctatcttcttgatga 322
            ||||| |||||||| ||  | |||||| |  |||||||||||||||||||||| |||||
Sbjct: 2372 ggcgtgtacttgaacttcttaaacttcttagtcaatgatagcatctatcttctggatga 2430



to top

>emb|BX832575.1|CNS0A1OG Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH81ZD10 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 3404

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 120/149 (80%)
 Strand = Plus / Plus

                                                                        
Query: 84   ctcgattatcttgtcaagaatcttctaaagctttatgtggatattgaattcactggctcc 143
            ||||| |||||||||| |||| | || || || ||||| || ||||| ||||| || || 
Sbjct: 2247 ctcgagtatcttgtcaggaatttactgaaactatatgttgacattgagttcacgggttca 2306

                                                                        
Query: 144  catacacaattctttgacaagtttaatattcgacacaacattgctgagcttcttgagtat 203
            || || || |||| ||||||||| |||||||| ||||||||||| |||||| | ||||||
Sbjct: 2307 cacactcagttctatgacaagttcaatattcgccacaacattgccgagcttttagagtat 2366

                                         
Query: 204  ttatgggatgttcccagtcatcgaaatgc 232
             | ||| | || || ||||| ||||||||
Sbjct: 2367 ctctggcaggtgcctagtcaccgaaatgc 2395



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 295  tcaatgatagcatctatcttcttgatga 322
            |||||||||||||||||||||| |||||
Sbjct: 2456 tcaatgatagcatctatcttctggatga 2483



to top

>emb|AL391143.1|ATT20K14 Arabidopsis thaliana DNA chromosome 5, BAC clone T20K14 (ESSA
            project)
          Length = 90176

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 74/88 (84%)
 Strand = Plus / Minus

                                                                        
Query: 153  ttctttgacaagtttaatattcgacacaacattgctgagcttcttgagtatttatgggat 212
            |||| ||||||||| |||||||| ||||||||||| |||||| | |||||| | ||| | 
Sbjct: 5189 ttctatgacaagttcaatattcgccacaacattgccgagcttttagagtatctctggcag 5130

                                        
Query: 213  gttcccagtcatcgaaatgcttggagac 240
            || || ||||| |||||||| |||||||
Sbjct: 5129 gtgcctagtcaccgaaatgcatggagac 5102



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                        
Query: 261  aagggcgtctacttgaattttctgaacttccttatcaatgatagcatctatcttcttgat 320
            |||||||| |||||||| ||  | |||||| |  |||||||||||||||||||||| |||
Sbjct: 5001 aagggcgtgtacttgaacttcttaaacttcttagtcaatgatagcatctatcttctggat 4942

              
Query: 321  ga 322
            ||
Sbjct: 4941 ga 4940



to top

>emb|AL353993.1|ATF8M21 Arabidopsis thaliana DNA chromosome 5, BAC clone F8M21 (ESSA project)
          Length = 103996

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 74/88 (84%)
 Strand = Plus / Minus

                                                                          
Query: 153    ttctttgacaagtttaatattcgacacaacattgctgagcttcttgagtatttatgggat 212
              |||| ||||||||| |||||||| ||||||||||| |||||| | |||||| | ||| | 
Sbjct: 103323 ttctatgacaagttcaatattcgccacaacattgccgagcttttagagtatctctggcag 103264

                                          
Query: 213    gttcccagtcatcgaaatgcttggagac 240
              || || ||||| |||||||| |||||||
Sbjct: 103263 gtgcctagtcaccgaaatgcatggagac 103236



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                          
Query: 261    aagggcgtctacttgaattttctgaacttccttatcaatgatagcatctatcttcttgat 320
              |||||||| |||||||| ||  | |||||| |  |||||||||||||||||||||| |||
Sbjct: 103135 aagggcgtgtacttgaacttcttaaacttcttagtcaatgatagcatctatcttctggat 103076

                
Query: 321    ga 322
              ||
Sbjct: 103075 ga 103074



to top

>gb|AC107447.5| Rattus norvegicus 4 BAC CH230-46D21 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 133054

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 277   attttctgaacttccttatcaatgata 303
             ||||||||||||||||| |||||||||
Sbjct: 32223 attttctgaacttccttgtcaatgata 32249



to top

>gb|AC068945.7| Homo sapiens BAC clone RP11-789C1 from 4, complete sequence
          Length = 219476

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 148    cacaattctttgacaagtttaa 169
              ||||||||||||||||||||||
Sbjct: 116024 cacaattctttgacaagtttaa 116045



to top

>emb|AJ617120.1| Nicotiana plumbaginifolia cDNA-AFLP fragment, clone Np334
          Length = 172

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 61/74 (82%)
 Strand = Plus / Plus

                                                                       
Query: 126 attgaattcactggctcccatacacaattctttgacaagtttaatattcgacacaacatt 185
           |||||||| || || ||||| || || |||| ||| || |||||||| || |||||||||
Sbjct: 2   attgaatttacaggatcccacactcagttctatgataaatttaatatccgccacaacatt 61

                         
Query: 186 gctgagcttcttga 199
           ||||| || |||||
Sbjct: 62  gctgaactacttga 75



to top

>gb|AC158497.2| Medicago truncatula chromosome 2 BAC clone mth2-48e18, complete sequence
          Length = 146321

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 164    gtttaatattcgacacaacatt 185
              ||||||||||||||||||||||
Sbjct: 123976 gtttaatattcgacacaacatt 123955



to top

>gb|U13019.1| Caenorhabditis elegans cosmid T12A2, complete sequence
          Length = 54118

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 313  ttcttgatgagagtttgaaaa 333
            |||||||||||||||||||||
Sbjct: 1051 ttcttgatgagagtttgaaaa 1031



to top

>ref|XM_387561.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG07385.1)
            partial mRNA
          Length = 3255

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 175  gacacaacattgctgagcttc 195
            |||||||||||||||||||||
Sbjct: 2390 gacacaacattgctgagcttc 2370



to top

>emb|AL611949.12| Mouse DNA sequence from clone RP23-454F13 on chromosome 4, complete
             sequence
          Length = 186276

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 581   gcagcttgctggtccccagag 601
             |||||||||||||||||||||
Sbjct: 43989 gcagcttgctggtccccagag 43969



to top

>ref|NM_179356.1| Arabidopsis thaliana ATP-dependent peptidase/ ubiquitin-protein
            ligase/ zinc ion binding AT1G18660 transcript variant
            AT1G18660.2 mRNA, complete cds
          Length = 1897

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 88   attatcttgtcaagaatctt 107
            ||||||||||||||||||||
Sbjct: 1856 attatcttgtcaagaatctt 1837



to top

>ref|NM_179357.1| Arabidopsis thaliana ATP-dependent peptidase/ ubiquitin-protein
            ligase/ zinc ion binding AT1G18660 transcript variant
            AT1G18660.3 mRNA, complete cds
          Length = 1906

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 88   attatcttgtcaagaatctt 107
            ||||||||||||||||||||
Sbjct: 1865 attatcttgtcaagaatctt 1846



to top

>ref|NM_101724.2| Arabidopsis thaliana ATP-dependent peptidase/ ubiquitin-protein
            ligase/ zinc ion binding AT1G18660 transcript variant
            AT1G18660.1 mRNA, complete cds
          Length = 1998

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 88   attatcttgtcaagaatctt 107
            ||||||||||||||||||||
Sbjct: 1957 attatcttgtcaagaatctt 1938



to top

>ref|NM_202130.1| Arabidopsis thaliana ATP-dependent peptidase/ ubiquitin-protein
            ligase/ zinc ion binding AT1G18660 transcript variant
            AT1G18660.4 mRNA, complete cds
          Length = 2089

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 88   attatcttgtcaagaatctt 107
            ||||||||||||||||||||
Sbjct: 2048 attatcttgtcaagaatctt 2029



to top

>gb|BT017585.1| Zea mays clone EL01N0430A01.c mRNA sequence
          Length = 604

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 530 tcttccagaaatggtggaaa 549
           ||||||||||||||||||||
Sbjct: 127 tcttccagaaatggtggaaa 108



to top

>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 220     gtcatcgaaatgcttggaga 239
               ||||||||||||||||||||
Sbjct: 1593119 gtcatcgaaatgcttggaga 1593100



to top

>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 409     gagaggagcggttgcgcgcgtttc 432
               ||||||||| ||||||||||||||
Sbjct: 2421943 gagaggagccgttgcgcgcgtttc 2421920



to top

>ref|XM_954578.1| Neurospora crassa OR74A hypothetical protein (NCU08128.1) partial
            mRNA
          Length = 1689

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 456  tttgatatgaagctcgcaaa 475
            ||||||||||||||||||||
Sbjct: 1573 tttgatatgaagctcgcaaa 1592



to top

>ref|XM_328833.1| Neurospora crassa OR74A hypothetical protein (NCU08128.1) partial
            mRNA
          Length = 1689

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 456  tttgatatgaagctcgcaaa 475
            ||||||||||||||||||||
Sbjct: 1573 tttgatatgaagctcgcaaa 1592



to top

>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 409     gagaggagcggttgcgcgcgtttc 432
               ||||||||| ||||||||||||||
Sbjct: 3637089 gagaggagccgttgcgcgcgtttc 3637066



to top

>gb|AC124710.4| Mus musculus BAC clone RP24-92A2 from chromosome 1, complete sequence
          Length = 162618

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 271    acttgaattttctgaacttcctta 294
              |||| |||||||||||||||||||
Sbjct: 109870 actttaattttctgaacttcctta 109893



to top

>gb|AC011809.2| Arabidopsis thaliana chromosome I BAC F6A14 genomic sequence, complete
              sequence
          Length = 108767

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 88     attatcttgtcaagaatctt 107
              ||||||||||||||||||||
Sbjct: 104030 attatcttgtcaagaatctt 104049



to top

>gb|AC098587.5| Homo sapiens BAC clone RP11-231C18 from 4, complete sequence
          Length = 132164

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 347   aaaggaaatagaggctgaaa 366
             ||||||||||||||||||||
Sbjct: 73324 aaaggaaatagaggctgaaa 73343



to top

>gb|AC101663.10| Mus musculus chromosome 1, clone RP23-37L1, complete sequence
          Length = 192592

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 271    acttgaattttctgaacttcctta 294
              |||| |||||||||||||||||||
Sbjct: 171233 actttaattttctgaacttcctta 171210



to top

>emb|AL591424.12| Human DNA sequence from clone RP11-424E7 on chromosome 9 Contains the 3'
              end of the CACNA1B gene for alpha 1B subunit of L type
              voltage-dependent calcium channel, a pseudogene similar to
              part of interleukin 9 receptor (ILR9), a tubulin, beta
              polypeptide 4, member Q (TUBB4Q) pseudogene and five CpG
              islands, complete sequence
          Length = 201853

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 22     ggatgccgcaaagaagaggc 41
              ||||||||||||||||||||
Sbjct: 183597 ggatgccgcaaagaagaggc 183578



to top

>emb|AL034405.16|HS537K23 Human DNA sequence from clone RP4-537K23 on chromosome Xq25-26.1
            Contains the 3' end of the ZDHHC9 gene for zinc finger,
            DHHC domain containing 9 (CGI-89, ZNF379), a novel gene,
            a sal-like family pseudogene, the SDCCAG16 gene for
            serologically defined colon cancer antigen 16 (NY-CO-16),
            the 5' UTR of a novel gene (FLHJ11362) and seven CpG
            islands, complete sequence
          Length = 156589

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 347  aaaggaaatagaggctgaaa 366
            ||||||||||||||||||||
Sbjct: 5090 aaaggaaatagaggctgaaa 5109



to top

>emb|CR548612.1| Paramecium tetraurelia macronuclear largest chromosome, complete sequence
          Length = 984602

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 140    ctcccatacacaattctttg 159
              ||||||||||||||||||||
Sbjct: 851989 ctcccatacacaattctttg 852008



to top

>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 409     gagaggagcggttgcgcgcgtttc 432
               ||||||||| ||||||||||||||
Sbjct: 3379797 gagaggagccgttgcgcgcgtttc 3379774



to top

>emb|BX005348.9| Zebrafish DNA sequence from clone DKEY-245J21 in linkage group 11,
           complete sequence
          Length = 145299

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 144 catacacaattctttgacaa 163
           ||||||||||||||||||||
Sbjct: 259 catacacaattctttgacaa 240



to top

>emb|BX323548.11| Zebrafish DNA sequence from clone DKEY-31D5 in linkage group 11,
            complete sequence
          Length = 229237

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 144  catacacaattctttgacaa 163
            ||||||||||||||||||||
Sbjct: 7129 catacacaattctttgacaa 7110



to top

>gb|AC096717.3| Homo sapiens BAC clone RP11-10O3 from 4, complete sequence
          Length = 109027

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 151   aattctttgacaagtttaatattc 174
             |||||||||||| |||||||||||
Sbjct: 17303 aattctttgacatgtttaatattc 17280



to top

>gb|AC092134.4| Homo sapiens chromosome 16 clone RP11-264M12, complete sequence
          Length = 159925

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 545   ggaaagggtggcgagcatgt 564
             ||||||||||||||||||||
Sbjct: 58687 ggaaagggtggcgagcatgt 58668



to top

>gb|AC091619.3| Papio anubis clone RP41-139B7, complete sequence
          Length = 181302

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 496    cttttacttcagaacaaatt 515
              ||||||||||||||||||||
Sbjct: 120366 cttttacttcagaacaaatt 120347



to top

>gb|AF169181.1|AF169181 Oryctolagus cuniculus interleukin 10 variant IL-10-C-rpt (IL-10)
           mRNA, partial cds; anomalously spliced
          Length = 429

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 572 cttcctcttgcagcttgctg 591
           ||||||||||||||||||||
Sbjct: 62  cttcctcttgcagcttgctg 43



to top

>gb|AF068058.1|AF068058 Oryctolagus cuniculus interleukin-10 mRNA, complete cds
          Length = 1089

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 572 cttcctcttgcagcttgctg 591
           ||||||||||||||||||||
Sbjct: 503 cttcctcttgcagcttgctg 484



to top

>emb|AL590633.9| Mouse DNA sequence from clone RP23-211O23 on chromosome X, complete
              sequence
          Length = 179289

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 301    atagcatctatcttcttgat 320
              ||||||||||||||||||||
Sbjct: 164252 atagcatctatcttcttgat 164271



to top

>gb|BT001981.1| Arabidopsis thaliana expressed protein (At1g18660) mRNA, complete cds
          Length = 1817

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 88   attatcttgtcaagaatctt 107
            ||||||||||||||||||||
Sbjct: 1805 attatcttgtcaagaatctt 1786



to top

>emb|BX842692.18| Zebrafish DNA sequence from clone DKEY-71H2 in linkage group 20,
            complete sequence
          Length = 190113

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 429  tttcatcagtcagagaatat 448
            ||||||||||||||||||||
Sbjct: 8108 tttcatcagtcagagaatat 8089



to top

>dbj|AP002963.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-97I14, complete
              sequence
          Length = 183204

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 348    aaggaaatagaggctgaaat 367
              ||||||||||||||||||||
Sbjct: 131540 aaggaaatagaggctgaaat 131559



to top

>gb|DQ304490.1| Oryctolagus cuniculus interleukin-10 (IL-10) mRNA, complete cds
          Length = 537

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 572 cttcctcttgcagcttgctg 591
           ||||||||||||||||||||
Sbjct: 457 cttcctcttgcagcttgctg 438



to top

>gb|AF088887.1|AF088887 Oryctolagus cuniculus interleukin-10 precursor, mRNA, complete cds
          Length = 1227

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 572 cttcctcttgcagcttgctg 591
           ||||||||||||||||||||
Sbjct: 457 cttcctcttgcagcttgctg 438



to top

>gb|AC165413.16| Mus musculus chromosome 1, clone RP23-242C11, complete sequence
          Length = 186380

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 347   aaaggaaatagaggctgaaa 366
             ||||||||||||||||||||
Sbjct: 71088 aaaggaaatagaggctgaaa 71069



to top

>dbj|D84217.1| Rabbit mRNA for interleukin-10, partial cds
          Length = 230

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 572 cttcctcttgcagcttgctg 591
           ||||||||||||||||||||
Sbjct: 210 cttcctcttgcagcttgctg 191


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,462,663
Number of Sequences: 3902068
Number of extensions: 6462663
Number of successful extensions: 125902
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 125653
Number of HSP's gapped (non-prelim): 242
length of query: 601
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 578
effective length of database: 17,143,297,704
effective search space: 9908826072912
effective search space used: 9908826072912
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top