>IBBWP_MAIZE (P31862) Bowman-Birk type wound-induced proteinase inhibitor WIP1|
           precursor
          Length = 102

 Score = 46.2 bits (108), Expect = 6e-05
 Identities = 26/61 (42%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
 Frame = +1

Query: 163 KCCNNCR-SFSGVDVCDDAHPKCPKGCSACRV---VTPSPHKTFRCADMKSTVDGTCGGP 330
           KCC NC  SFSG+  CDD    C   C  C V    + S +  FRC D   T  G CG  
Sbjct: 45  KCCTNCNFSFSGLYTCDDVKKDCDPVCKKCVVAVHASYSGNNKFRCTD---TFLGMCGPK 101

Query: 331 C 333
           C
Sbjct: 102 C 102

>PKSJ_BACSU (P40806) Putative polyketide synthase pksJ (PKS)|
          Length = 5045

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = -3

Query: 320  QVPSTVLFMSAQRNVL*GL--GVTTRQAEQPLGHLGWASSQTST 195
            Q+P T +FMSA  N    L    TT   E P G++ W  +Q+ T
Sbjct: 1869 QIPQTSVFMSASNNSYRALLPSDTTESLETPDGYVSWVLAQSGT 1912

>FPG_DEIRA (Q9RX22) Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)|
           (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic
           site) lyase mutM) (EC 4.2.99.18) (AP lyase mutM)
          Length = 279

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 18/51 (35%), Positives = 25/51 (49%)
 Frame = -3

Query: 254 TRQAEQPLGHLGWASSQTSTPEKDLQLLQHLGKKSAFTWERIPMTRTAWRM 102
           TR+ +  L HL  A +    P  DL+L+ HLG    F  E  P TR  + +
Sbjct: 48  TRRGKYLLLHLAAADAAEDEPH-DLELIVHLGMTGGFRLEEGPHTRVTFEL 97

>ZPBP1_HUMAN (Q9BS86) Zona pellucida-binding protein 1 precursor (Sp38)|
          Length = 351

 Score = 30.0 bits (66), Expect = 4.1
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = +1

Query: 181 RSFSGVDVCDDAHPKCPKGCSACRVVTPSPHKTFRCADMKSTV 309
           R F G  +    HPKCP+ C  C   + +P     C    S++
Sbjct: 301 RCFPGYGMNVQQHPKCPECCVICSPGSYNPRDGIHCLQCNSSL 343

>LCE5A_HUMAN (Q5TCM9) Late cornified envelope protein 5A (Late envelope protein|
           18) (Small proline-rich-like epidermal differentiation
           complex protein 5A)
          Length = 118

 Score = 29.6 bits (65), Expect = 5.4
 Identities = 29/92 (31%), Positives = 30/92 (32%), Gaps = 4/92 (4%)
 Frame = +1

Query: 160 PKCCNNCRSFSGVDVCDDAHPKCPKGCSACRVVTPSPHKTFRCADMKSTVDGTC----GG 327
           PKC   C             PKCP  CSA     P P     C    S+  G C    GG
Sbjct: 14  PKCTPKCPPKCTPKCPPKCPPKCPPQCSA-----PCPPPVSSCCG--SSSGGCCSSEGGG 66

Query: 328 PCKKH*SLQGFRLGRGVPPRIKLR*DEQSSCC 423
            C  H             PR  LR   QSS C
Sbjct: 67  CCLSH-----------HRPRQSLRRRPQSSSC 87

>IBB1_ARAHY (P01066) Bowman-Birk type proteinase inhibitor A-II [Contains:|
           Bowman-Birk type proteinase inhibitor A-I; Bowman-Birk
           type proteinase inhibitor B-I; Bowman-Birk type
           proteinase inhibitor B-III]
          Length = 70

 Score = 29.6 bits (65), Expect = 5.4
 Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 5/48 (10%)
 Frame = +1

Query: 166 CCNNCRSFSGVD-----VCDDAHPKCPKGCSACRVVTPSPHKTFRCAD 294
           CCN C            VC D    CP  C++C V T S     RC D
Sbjct: 11  CCNGCLCDRRAPPYFECVCVDTFDHCPASCNSC-VCTRSNPPQCRCTD 57

>RECQ5_HUMAN (O94762) ATP-dependent DNA helicase Q5 (EC 3.6.1.-) (RecQ|
           protein-like 5) (RecQ5)
          Length = 991

 Score = 28.9 bits (63), Expect = 9.2
 Identities = 16/51 (31%), Positives = 22/51 (43%)
 Frame = +1

Query: 178 CRSFSGVDVCDDAHPKCPKGCSACRVVTPSPHKTFRCADMKSTVDGTCGGP 330
           CR  +      DA P C KGC  C+  T +  +     +  S+   TC GP
Sbjct: 411 CRHAAIAKYFGDALPACAKGCDHCQNPT-AVRRRLEALERSSSWSKTCIGP 460

>ARHG6_MOUSE (Q8K4I3) Rho guanine nucleotide exchange factor 6 (Rac/Cdc42|
           guanine nucleotide exchange factor 6)
          Length = 771

 Score = 28.9 bits (63), Expect = 9.2
 Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
 Frame = -3

Query: 521 NKQHQLFVERENTVTINSVHIVGRITRAHTQA*QHDDCSSHLSFILGGTPRPSL------ 360
           N+  Q ++E+ N +T       G +++  + +     CS+H SF   G PR  L      
Sbjct: 532 NQDFQEWMEQLNRLTKGPTSC-GSLSKTSSSS-----CSTHSSFSSTGQPRGPLEPPQII 585

Query: 359 KP*SDQCFLHGPPQVPSTVL 300
           KP S  C    PP  PS  L
Sbjct: 586 KPWSLSCLRPAPPLRPSAAL 605

>POMT1_DROME (Q9VTK2) Protein O-mannosyltransferase 1 (EC 2.4.1.109)|
           (Dolichyl-phosphate-mannose--protein mannosyltransferase
           1) (dPOMT1) (Protein rotated abdomen)
          Length = 886

 Score = 28.9 bits (63), Expect = 9.2
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
 Frame = +1

Query: 160 PKCCNNCRSFSGVDVCDD--AHPKCPKGCSACRVVTPSPHKT 279
           P CCN  R+ + ++ C D   H   P   S  R  TP+P  T
Sbjct: 61  PLCCNGARALTMLNCCVDVNCHLNAPLRGSVNRHTTPTPTPT 102


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,596,317
Number of Sequences: 219361
Number of extensions: 1044231
Number of successful extensions: 2985
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2980
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4085413911
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)