>gb|AY549888.2| Triticum aestivum putative proteinase inhibitor-related protein
           (wrsi5-1) mRNA, complete cds
          Length = 608

 Score =  543 bits (274), Expect = e-151
 Identities = 405/445 (91%), Gaps = 4/445 (0%)
 Strand = Plus / Plus

                                                                       
Query: 22  gaccgcacaggtaaagctcgagctttgcgctaagagagttcatccgcagccatgaagggc 81
           |||||||||||| |||   |||||||||||||| || ||||||| |||  ||||||| ||
Sbjct: 37  gaccgcacaggtgaagtgagagctttgcgctaa-agggttcatcagcaagcatgaagagc 95

                                                                       
Query: 82  accaagctggcggcgatcctcatcctccaggccgtcctggtcatggggatcctctcccac 141
           |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 96  accaagctcgcggcgatcctgatcctccaggccgtcctggtcatggggatcctctcacac 155

                                                                       
Query: 142 gtgaacgccgacttcttccccaagtgctgcaacaactgcaggtccttctcgggggtcgac 201
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 156 gtgaacgccgacttcttccccaagtgctgcaacaactgcaggtccttctccggggtcgac 215

                                                                       
Query: 202 gtctgcgacgacgcccaccccaagtgccccaaaggctgctccgcctgccgcgtggtgacc 261
           ||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||| 
Sbjct: 216 gtctgcgacgacgcccacccccagtgccccaagggctgctcggcctgccgcgtggtgacg 275

                                                                       
Query: 262 ccgagccctcacaagacgttccgctgcgccgacatgaagagcaccgtcgacggcacctgc 321
           || |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 276 cccagccctcacaagacgttccggtgcgccgacatgaagagcaccgtcgatggcacctgc 335

                                                                       
Query: 322 ggtggcccatgcaaaaagcactgatcgcttcagggcttcaggctcggacgaggtgtgccg 381
           || || ||||||||||||||||||||  ||||||||||||| ||| ||||||| ||||||
Sbjct: 336 ggcgggccatgcaaaaagcactgatccgttcagggcttcagtctcagacgaggggtgccg 395

                                                                       
Query: 382 cctagaataaagctcagatgagatgagcagtcatcgtgttgctatgcttgtgtgtgggcc 441
           |||| ||||||||||||||||||||||||||||| | |   |||||||| | |||||| |
Sbjct: 396 cctaaaataaagctcagatgagatgagcagtcatggcgc--ctatgcttctctgtgggtc 453

                                    
Query: 442 cgcgttatacggccaacaatatgta 466
            | | ||||||||||||||||||||
Sbjct: 454 -gtgctatacggccaacaatatgta 477

>emb|Z48729.1|HVBSI1 H.vulgare Bsi1 gene for putative protease inhibitor
          Length = 498

 Score =  307 bits (155), Expect = 2e-80
 Identities = 256/289 (88%), Gaps = 3/289 (1%)
 Strand = Plus / Plus

                                                                       
Query: 62  catccgcagccatgaagggcaccaagctggcggcgatcctcatcctccaggccgtcctgg 121
           |||| ||| ||||||||||||||||||| |||||||| || |||||||||||||||||||
Sbjct: 1   catcagcaaccatgaagggcaccaagctcgcggcgattctgatcctccaggccgtcctgg 60

                                                                       
Query: 122 tcatggggatcctctcccacgtgaacgccgacttcttccccaagtgctgcaacaactgca 181
           |||||||  ||||||| ||||||||||||| ||  ||||||| |||||||||||||||||
Sbjct: 61  tcatgggagtcctctcgcacgtgaacgccgtctatttccccacgtgctgcaacaactgca 120

                                                                       
Query: 182 ggtccttctcgggggtcgacgtctgcgacgacgcccaccccaagtgccccaaaggctgct 241
           |||||||||| |||||||||||||||||||||||||| ||  |||||||||  |||||||
Sbjct: 121 ggtccttctccggggtcgacgtctgcgacgacgcccatccgcagtgccccaccggctgct 180

                                                                       
Query: 242 ccgcctgccgcgtggtgaccccgagccctcacaagacgttccgctgcgccgacatgaaga 301
           | || ||||||||||||||| ||| |||   | |||||||||||||||||||||||||  
Sbjct: 181 cggcgtgccgcgtggtgaccacgaaccc---ccagacgttccgctgcgccgacatgaaag 237

                                                            
Query: 302 gcaccgtcgacggcacctgcggtggcccatgcaaaaagcactgatcgct 350
            ||||||||||||||||||||| || |||||||| ||| ||||||||||
Sbjct: 238 ccaccgtcgacggcacctgcggcgggccatgcaagaagtactgatcgct 286

>gb|L11882.1|WHTWALI5A Triticum aestivum protein of unknown function (wali5) mRNA,
           complete cds
          Length = 520

 Score =  295 bits (149), Expect = 8e-77
 Identities = 250/283 (88%), Gaps = 3/283 (1%)
 Strand = Plus / Plus

                                                                       
Query: 71  ccatgaagggcaccaagctggcggcgatcctcatcctccaggccgtcctggtcatgggga 130
           ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||  
Sbjct: 71  ccatgaagggcaccaagctcgcggcgatcctgatcctccaggccgtcctggtcatgggac 130

                                                                       
Query: 131 tcctctcccacgtgaacgccgacttcttccccaagtgctgcaacaactgcaggtccttct 190
           ||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 131 tcctctcacacgtgaacgccgattttttccccaagtgctgcaacaactgcaggtccttct 190

                                                                       
Query: 191 cgggggtcgacgtctgcgacgacgcccaccccaagtgccccaaaggctgctccgcctgcc 250
           ||||||||||||||||||||||||||||||||||||| ||| | |||||||| || ||||
Sbjct: 191 cgggggtcgacgtctgcgacgacgcccaccccaagtgtccccagggctgctcggcgtgcc 250

                                                                       
Query: 251 gcgtggtgaccccgagccctcacaagacgttccgctgcgccgacatgaagagcaccgtcg 310
           |||||||| |  |||||||   | | | ||  |||||||| || |||||   ||||||||
Sbjct: 251 gcgtggtgtcgacgagccc---cgaaatgtggcgctgcgcggatatgaaatccaccgtcg 307

                                                      
Query: 311 acggcacctgcggtggcccatgcaaaaagcactgatcgcttca 353
           |||||||||||||||| || ||||| ||| |||||||| ||||
Sbjct: 308 acggcacctgcggtggaccctgcaagaagtactgatcggttca 350



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 44/47 (93%)
 Strand = Plus / Plus

                                                          
Query: 476 tcgtcactgtgttttctctctcgacaaaaagctggtgttgcttgttg 522
           ||||| |||||||||||||||||| |||||| |||||||||||||||
Sbjct: 467 tcgtcgctgtgttttctctctcgagaaaaagttggtgttgcttgttg 513

>gb|L28009.1|WHTWALIA Triticum aestivum (wali6) mRNA, complete cds
          Length = 585

 Score =  117 bits (59), Expect = 4e-23
 Identities = 118/137 (86%), Gaps = 3/137 (2%)
 Strand = Plus / Plus

                                                                       
Query: 93  ggcgatcctcatcctccaggccgtcctggtcatggggatcctctcccacgtgaacgccga 152
           ||||||||| || ||||||||||||||||||||||| |||||||| || | |||||||||
Sbjct: 96  ggcgatcctgattctccaggccgtcctggtcatgggaatcctctcacaggcgaacgccga 155

                                                                       
Query: 153 cttcttccccaagtgctgcaacaactgcaggtccttctcgggggtcgacgtctgcgacga 212
            |||   || || |||||| |||||||||||| ||||||||||| ||  |||||||||||
Sbjct: 156 gttc---ccgaaatgctgcgacaactgcaggttcttctcgggggccgtggtctgcgacga 212

                            
Query: 213 cgcccaccccaagtgcc 229
           ||||  |||||||||||
Sbjct: 213 cgccggccccaagtgcc 229

>gb|L11881.1|WHTWALI3A Triticum aestivum protein of unknown function (wali3) mRNA,
           complete cds
          Length = 564

 Score =  117 bits (59), Expect = 4e-23
 Identities = 115/133 (86%), Gaps = 3/133 (2%)
 Strand = Plus / Plus

                                                                       
Query: 97  atcctcatcctccaggccgtcctggtcatggggatcctctcccacgtgaacgccgacttc 156
           ||||| ||||| |||||||||||||||||||| |||||||| || | ||||||||| |||
Sbjct: 79  atcctgatccttcaggccgtcctggtcatgggaatcctctcacaggcgaacgccgagttc 138

                                                                       
Query: 157 ttccccaagtgctgcaacaactgcaggtccttctcgggggtcgacgtctgcgacgacgcc 216
              |||||||||||| |||||||||||| ||||||||||| ||  |||||||| ||||||
Sbjct: 139 ---cccaagtgctgcgacaactgcaggttcttctcgggggccgtggtctgcgatgacgcc 195

                        
Query: 217 caccccaagtgcc 229
             |||||||||||
Sbjct: 196 ggccccaagtgcc 208

>gb|AY641412.1| Hordeum vulgare subsp. vulgare retrotransposon Sandra5, complete
             sequence; splicing factor SF2-like protein (SF2) and
             universal stress protein (USP1) genes and Hv
             receptor-kinase-like pseudogene, complete cds; and
             retrotransposons Sandra6 and Sandra7, complete sequence
          Length = 82293

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                 
Query: 104   tcctccaggccgtcctggtcatggggatcctctccc 139
             ||||||||||| ||||||||||||| ||||||||||
Sbjct: 71810 tcctccaggccatcctggtcatgggaatcctctccc 71845

>ref|NM_184249.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 306

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 106 ctccaggccgtcctggtcatggggat 131
           ||||||||||||||||||||||||||
Sbjct: 34  ctccaggccgtcctggtcatggggat 59

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                         
Query: 106     ctccaggccgtcctggtcatggggat 131
               ||||||||||||||||||||||||||
Sbjct: 1757697 ctccaggccgtcctggtcatggggat 1757672

>dbj|AP002526.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0504H10
          Length = 143515

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                        
Query: 106    ctccaggccgtcctggtcatggggat 131
              ||||||||||||||||||||||||||
Sbjct: 100040 ctccaggccgtcctggtcatggggat 100015

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 116      tcctggtcatggggatcctctcc 138
                |||||||||||||||||||||||
Sbjct: 25930562 tcctggtcatggggatcctctcc 25930540

>dbj|AP003568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0017B12
          Length = 157424

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 116   tcctggtcatggggatcctctcc 138
             |||||||||||||||||||||||
Sbjct: 85660 tcctggtcatggggatcctctcc 85638

>dbj|AK070101.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023044I16, full
           insert sequence
          Length = 2261

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 116 tcctggtcatggggatcctctcc 138
           |||||||||||||||||||||||
Sbjct: 818 tcctggtcatggggatcctctcc 840

>gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequence
          Length = 642517

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 296    tgaagagcaccgtcgacggca 316
              |||||||||||||||||||||
Sbjct: 634902 tgaagagcaccgtcgacggca 634922

>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 162     caagtgctgcaacaactgca 181
               ||||||||||||||||||||
Sbjct: 2027891 caagtgctgcaacaactgca 2027872

>ref|NM_001040330.1| Danio rerio zgc:136662 (zgc:136662), mRNA
          Length = 2659

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 302  gcaccgtcgacggcacctgc 321
            ||||||||||||||||||||
Sbjct: 1408 gcaccgtcgacggcacctgc 1389

>ref|NM_001012370.1| Danio rerio exostoses (multiple) 1c (ext1c), mRNA
          Length = 2214

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 302  gcaccgtcgacggcacctgc 321
            ||||||||||||||||||||
Sbjct: 1156 gcaccgtcgacggcacctgc 1137

>gb|BC115216.1| Danio rerio exostoses (multiple) 1c, mRNA (cDNA clone MGC:136662
            IMAGE:8000407), complete cds
          Length = 2659

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 302  gcaccgtcgacggcacctgc 321
            ||||||||||||||||||||
Sbjct: 1408 gcaccgtcgacggcacctgc 1389

>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 88      ctggcggcgatcctcatcctccaggccg 115
               |||||||||||||| |||||||| ||||
Sbjct: 1946747 ctggcggcgatcctgatcctccacgccg 1946720

>gb|AC090116.15| Homo sapiens 12q BAC RP11-578B16 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 162004

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 392   agctcagatgagatgagcag 411
             ||||||||||||||||||||
Sbjct: 86131 agctcagatgagatgagcag 86150

>ref|XM_680169.1| PREDICTED: Danio rerio similar to EXT1c (LOC572763), partial mRNA
          Length = 240

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 302 gcaccgtcgacggcacctgc 321
           ||||||||||||||||||||
Sbjct: 136 gcaccgtcgacggcacctgc 117

>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 319     tgcggtggcccatgcaaaaa 338
               ||||||||||||||||||||
Sbjct: 1357655 tgcggtggcccatgcaaaaa 1357636

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 279    gttccgctgcgccgacatga 298
              ||||||||||||||||||||
Sbjct: 807673 gttccgctgcgccgacatga 807692

>gb|AF042096.3|AF042096 Bradyrhizobium japonicum UbiE (ubiE) gene, partial cds; AarF (aarF),
            panthotenate metabolism flavoprotein (dfp),
            deoxyuridine-triphosphatase (dut), putative sensor
            protein (bdfA), GalF-like (galF), hypothetical protein
            genes, complete cds; putative helicase 2 gene, partial
            cds; and unknown genes
          Length = 13289

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 279  gttccgctgcgccgacatga 298
            ||||||||||||||||||||
Sbjct: 8366 gttccgctgcgccgacatga 8347

>gb|AY734457.1| Danio rerio EXT1c mRNA, complete cds
          Length = 2214

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 302  gcaccgtcgacggcacctgc 321
            ||||||||||||||||||||
Sbjct: 1156 gcaccgtcgacggcacctgc 1137

>emb|AL669975.9| Mouse DNA sequence from clone RP23-218H24 on chromosome X, complete
              sequence
          Length = 230634

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 482    ctgtgttttctctctcgacaaaaagctg 509
              |||||||||||||| | |||||||||||
Sbjct: 184199 ctgtgttttctctcccaacaaaaagctg 184172


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,696,776
Number of Sequences: 3902068
Number of extensions: 3696776
Number of successful extensions: 67224
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 66928
Number of HSP's gapped (non-prelim): 292
length of query: 532
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 509
effective length of database: 17,143,297,704
effective search space: 8725938531336
effective search space used: 8725938531336
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)