ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd17p07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK070082.1| Oryza sativa (japonica cultivar-group) cDNA clon... 458 e-125
2ref|NM_188722.1| Oryza sativa (japonica cultivar-group), predic... 436 e-119
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 153 8e-34
4dbj|AP003201.3| Oryza sativa (japonica cultivar-group) genomic D... 153 8e-34
5ref|XM_465210.1| Oryza sativa (japonica cultivar-group), mRNA 56 1e-04
6dbj|AK100390.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
7dbj|AK061035.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
8dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
9dbj|AP004845.3| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
10gb|AY110607.1| Zea mays CL3077_1 mRNA sequence 54 5e-04
11ref|NM_191261.1| Oryza sativa (japonica cultivar-group), predic... 50 0.008
12dbj|AP003268.4| Oryza sativa (japonica cultivar-group) genomic D... 50 0.008
13dbj|AP003249.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.008
14gb|AE012222.1| Xanthomonas campestris pv. campestris str. ATCC 3... 46 0.13
15gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 46 0.13
16dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023 44 0.51
17dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 44 0.51
18dbj|AP004891.4| Oryza sativa (japonica cultivar-group) genomic D... 44 0.51
19gb|BC094393.1| Mus musculus RIKEN cDNA 1110005A23 gene, mRNA (cD... 42 2.0
20ref|NM_025364.1| Mus musculus RIKEN cDNA 1110005A23 gene (111000... 42 2.0
21gb|AY593992.1| Homo sapiens upstream transcription factor 1 (USF... 42 2.0
22ref|XM_991289.1| PREDICTED: Mus musculus similar to cytokine ind... 42 2.0
23ref|XM_924323.2| PREDICTED: Mus musculus similar to cytokine ind... 42 2.0
24ref|XM_899946.2| PREDICTED: Mus musculus similar to cytokine ind... 42 2.0
25gb|AC132088.4| Mus musculus BAC clone RP24-410M8 from chromosome... 42 2.0
26gb|AC134830.2| Mus musculus BAC clone RP24-498G16 from chromosom... 42 2.0
27emb|AL591806.16| Human DNA sequence from clone RP11-544M22 on ch... 42 2.0
28emb|AL589847.6| Human DNA sequence from clone RP13-477D10 on chr... 42 2.0
29dbj|AK146248.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length... 42 2.0
30gb|AC018691.10| Homo sapiens BAC clone RP11-547F10 from 2, compl... 42 2.0
31dbj|AK003453.1| Mus musculus 18-day embryo whole body cDNA, RIKE... 42 2.0
32dbj|AK088266.1| Mus musculus 2 days neonate thymus thymic cells ... 42 2.0
33dbj|AK018773.1| Mus musculus adult male cerebellum cDNA, RIKEN f... 42 2.0
34gb|BC027510.1| Mus musculus RIKEN cDNA 1110005A23 gene, mRNA (cD... 42 2.0
35gb|BC100070.1| Rattus norvegicus similar to RIKEN cDNA 1110005A2... 42 2.0
36dbj|AB017568.1| Homo sapiens USF1 gene, complete cds 42 2.0
37ref|NM_001033070.1| Rattus norvegicus similar to RIKEN cDNA 1110... 42 2.0
38gb|AY617967.1| Sterkiella histriomuscorum clone UGC1O0006_K18_F ... 40 8.0
39ref|XM_744626.1| Aspergillus fumigatus Af293 SIR2 family histone... 40 8.0
40emb|AL583840.10| Human DNA sequence from clone RP11-438N24 on ch... 40 8.0
41emb|AL589665.4| Human DNA sequence from clone RP11-123D12 on chr... 40 8.0
42emb|AL390036.17| Human DNA sequence from clone RP11-356N1 on chr... 40 8.0
43emb|AL390997.10| Human DNA sequence from clone RP11-159G6 on chr... 40 8.0
44emb|AL354796.21| Human DNA sequence from clone RP11-145E17 on ch... 40 8.0
45emb|AL137839.6| Human DNA sequence from clone RP3-471C18 on chro... 40 8.0
46gb|AC016939.8| Homo sapiens X BAC RP5-1014O16 (Roswell Park Canc... 40 8.0
47gb|DQ027015.1| Chlamydomonas reinhardtii MCD1 (MCD1) mRNA, compl... 40 8.0
48dbj|AP006861.1| Chlamydophila felis Fe/C-56 DNA, complete genome 40 8.0
49gb|DQ397553.1| Cenarchaeum symbiosum clone C07E08, complete sequ... 40 8.0
50gb|AC073063.12| Homo sapiens BAC clone RP11-136B3 from 7, comple... 40 8.0
51dbj|AK156103.1| Mus musculus activated spleen cDNA, RIKEN full-l... 40 8.0
52gb|AC079345.5| Homo sapiens BAC clone RP11-181C18 from 4, comple... 40 8.0
53gb|BC109532.1| Bos taurus cDNA clone MGC:133754 IMAGE:8056746, c... 40 8.0
54gb|AC150244.2| Medicago truncatula chromosome 7 BAC clone mth2-1... 40 8.0
55gb|AC146422.4| Pan troglodytes BAC clone RP43-27K9 from chromoso... 40 8.0
56gb|AC108051.3| Homo sapiens BAC clone RP11-332D2 from 2, complet... 40 8.0
57dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 40 8.0
58gb|AC007372.4|AC007372 Homo sapiens chromosome 14 BAC containing... 40 8.0
59gb|AC007157.6|AC007157 Homo sapiens, clone hRPK.78_A_1, complete... 40 8.0
60emb|AL049837.4|CNS0000F Human chromosome 14 DNA sequence BAC R-9... 40 8.0
61gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 8.0
62gb|AC147644.3| Gallus gallus BAC clone CH261-77K20 from chromoso... 40 8.0
63gb|AC172101.1| Medicago truncatula chromosome 7 BAC clone mth2-2... 40 8.0
64emb|AL645856.5| Mouse DNA sequence from clone RP23-151N19 on chr... 40 8.0 
>dbj|AK070082.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023044E02, full
           insert sequence
          Length = 960

 Score =  458 bits (231), Expect = e-125
 Identities = 378/427 (88%)
 Strand = Plus / Plus

                                                                       
Query: 158 cgctgccggtgatgaagctggggacgctgctgctgcggacgctgtccaagcctatcgcca 217
           |||||||||||  ||||||||||||||||  ||||||||||||||||||||| |||||||
Sbjct: 109 cgctgccggtggcgaagctggggacgctggcgctgcggacgctgtccaagcccatcgcca 168

                                                                       
Query: 218 accgcctcaagagccaggcagccgtccaccccaagtttcgcgacttcatcatcagcatcg 277
            ||||||||||| |||||| ||||||||||||||||| ||| ||||||||||| ||||||
Sbjct: 169 gccgcctcaagaaccaggccgccgtccaccccaagttccgcaacttcatcatctgcatcg 228

                                                                       
Query: 278 cccagacaaaccatcgtatcactacaaggatacaaaggcgcatttatgggcatgctacta 337
           | ||||  ||||||||| | ||||||||||||||||||||||||||||||||||| ||  
Sbjct: 229 cgcagattaaccatcgtgttactacaaggatacaaaggcgcatttatgggcatgcaacag 288

                                                                       
Query: 338 atgtggctatcagacctttagatgaggagaaggcagtacaagttgctacagatctcattg 397
           ||||||  |||| ||||||| |||||||||| || ||||||| |||||| ||||||||||
Sbjct: 289 atgtggaaatcacacctttaaatgaggagaaagctgtacaagctgctacggatctcattg 348

                                                                       
Query: 398 gagaaggcttcatcttttcggttgctgtcgctgctttaattttcgaggtgcaaaggagtg 457
           |||||||||| || |||||||||||||| |||||||||||||| ||||||||||| | ||
Sbjct: 349 gagaaggctttattttttcggttgctgttgctgctttaatttttgaggtgcaaagaaatg 408

                                                                       
Query: 458 ctaggtcagaggctagaaaggaggaagctcgtaaacaggaacttgaggaactgagacaaa 517
           | |||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||| 
Sbjct: 409 caaggtcagaggctaggaaggaggaagctcgtaaacaggaacttgaggaattgaaacaac 468

                                                                       
Query: 518 aggaagagattttagctaaagatttagaagagctcaagctgaagcttgctgaacttgagc 577
            |||||||| |||| |||||||||| || || || || |||| |||||||||| ||||||
Sbjct: 469 gggaagagagtttatctaaagatttggaggatcttaaactgaggcttgctgaaattgagc 528

                  
Query: 578 gcctcgc 584
            ||||||
Sbjct: 529 acctcgc 535
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>ref|NM_188722.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 720

 Score =  436 bits (220), Expect = e-119
 Identities = 378/430 (87%), Gaps = 3/430 (0%)
 Strand = Plus / Plus

                                                                       
Query: 158 cgctgccggtgatgaagctggggacgctgctgctgcggacgctgtccaagcctatcgcca 217
           |||||||||||  ||||||||||||||||  ||||||||||||||||||||| |||||||
Sbjct: 209 cgctgccggtggcgaagctggggacgctggcgctgcggacgctgtccaagcccatcgcca 268

                                                                       
Query: 218 accgcctcaagagccaggcagccgtccaccccaagtttcgcgacttcatcatcagcatcg 277
            ||||||||||| |||||| ||||||||||||||||| ||| ||||||||||| ||||||
Sbjct: 269 gccgcctcaagaaccaggccgccgtccaccccaagttccgcaacttcatcatctgcatcg 328

                                                                       
Query: 278 cccagacaaaccatcgtatcactacaaggatacaaaggcgcatttatgggcatgctacta 337
           | ||||  ||||||||| | ||||||||||||||||||||||||||||||||||| ||  
Sbjct: 329 cgcagattaaccatcgtgttactacaaggatacaaaggcgcatttatgggcatgcaacag 388

                                                                       
Query: 338 atgtggctatcagacctttagatgaggagaaggcagtacaagttgctacagatctcattg 397
           ||||||  |||| ||||||| |||||||||| || ||||||| |||||| ||||||||||
Sbjct: 389 atgtggaaatcacacctttaaatgaggagaaagctgtacaagctgctacggatctcattg 448

                                                                       
Query: 398 gagaaggcttcatcttttcggttgctgtcgctgctttaattttcgaggtgcaaaggagtg 457
           |||||||||| || |||||||||||||| |||||||||||||| ||||||||||| | ||
Sbjct: 449 gagaaggctttattttttcggttgctgttgctgctttaatttttgaggtgcaaagaaatg 508

                                                                       
Query: 458 ctaggtcagaggctagaaaggaggaagctcgtaaacaggaacttga---ggaactgagac 514
           | |||||||||||||| |||||||||||||||||||||||||||||   |||| ||| ||
Sbjct: 509 caaggtcagaggctaggaaggaggaagctcgtaaacaggaacttgaggtggaattgaaac 568

                                                                       
Query: 515 aaaaggaagagattttagctaaagatttagaagagctcaagctgaagcttgctgaacttg 574
           ||  |||||||| |||| |||||||||| || || || || |||| |||||||||| |||
Sbjct: 569 aacgggaagagagtttatctaaagatttggaggatcttaaactgaggcttgctgaaattg 628

                     
Query: 575 agcgcctcgc 584
           ||| ||||||
Sbjct: 629 agcacctcgc 638
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  153 bits (77), Expect = 8e-34
 Identities = 110/121 (90%)
 Strand = Plus / Plus

                                                                           
Query: 158     cgctgccggtgatgaagctggggacgctgctgctgcggacgctgtccaagcctatcgcca 217
               |||||||||||  ||||||||||||||||  ||||||||||||||||||||| |||||||
Sbjct: 7851795 cgctgccggtggcgaagctggggacgctggcgctgcggacgctgtccaagcccatcgcca 7851854

                                                                           
Query: 218     accgcctcaagagccaggcagccgtccaccccaagtttcgcgacttcatcatcagcatcg 277
                ||||||||||| |||||| ||||||||||||||||| ||| ||||||||||| ||||||
Sbjct: 7851855 gccgcctcaagaaccaggccgccgtccaccccaagttccgcaacttcatcatctgcatcg 7851914

                
Query: 278     c 278
               |
Sbjct: 7851915 c 7851915



 Score =  147 bits (74), Expect = 5e-32
 Identities = 119/134 (88%)
 Strand = Plus / Plus

                                                                           
Query: 286     aaccatcgtatcactacaaggatacaaaggcgcatttatgggcatgctactaatgtggct 345
               ||||||||| | ||||||||||||||||||||||||||||||||||| ||  ||||||  
Sbjct: 7852773 aaccatcgtgttactacaaggatacaaaggcgcatttatgggcatgcaacagatgtggaa 7852832

                                                                           
Query: 346     atcagacctttagatgaggagaaggcagtacaagttgctacagatctcattggagaaggc 405
               |||| ||||||| |||||||||| || ||||||| |||||| ||||||||||||||||||
Sbjct: 7852833 atcacacctttaaatgaggagaaagctgtacaagctgctacggatctcattggagaaggc 7852892

                             
Query: 406     ttcatcttttcggt 419
               || || ||||||||
Sbjct: 7852893 tttattttttcggt 7852906



 Score =  131 bits (66), Expect = 3e-27
 Identities = 87/94 (92%)
 Strand = Plus / Plus

                                                                           
Query: 412     ttttcggttgctgtcgctgctttaattttcgaggtgcaaaggagtgctaggtcagaggct 471
               |||| ||||||||| |||||||||||||| ||||||||||| | ||| ||||||||||||
Sbjct: 7853058 ttttaggttgctgttgctgctttaatttttgaggtgcaaagaaatgcaaggtcagaggct 7853117

                                                 
Query: 472     agaaaggaggaagctcgtaaacaggaacttgagg 505
               || |||||||||||||||||||||||||||||||
Sbjct: 7853118 aggaaggaggaagctcgtaaacaggaacttgagg 7853151



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                         
Query: 242      tccaccccaagtttcgcgacttcatcatcagcatcgcccag 282
                ||||||||||||| |||| |||||||||| || ||||||||
Sbjct: 31600544 tccaccccaagttccgcggcttcatcatcggcctcgcccag 31600504
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>dbj|AP003201.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1066G12
          Length = 136263

 Score =  153 bits (77), Expect = 8e-34
 Identities = 110/121 (90%)
 Strand = Plus / Plus

                                                                         
Query: 158   cgctgccggtgatgaagctggggacgctgctgctgcggacgctgtccaagcctatcgcca 217
             |||||||||||  ||||||||||||||||  ||||||||||||||||||||| |||||||
Sbjct: 46741 cgctgccggtggcgaagctggggacgctggcgctgcggacgctgtccaagcccatcgcca 46800

                                                                         
Query: 218   accgcctcaagagccaggcagccgtccaccccaagtttcgcgacttcatcatcagcatcg 277
              ||||||||||| |||||| ||||||||||||||||| ||| ||||||||||| ||||||
Sbjct: 46801 gccgcctcaagaaccaggccgccgtccaccccaagttccgcaacttcatcatctgcatcg 46860

              
Query: 278   c 278
             |
Sbjct: 46861 c 46861



 Score =  147 bits (74), Expect = 5e-32
 Identities = 119/134 (88%)
 Strand = Plus / Plus

                                                                         
Query: 286   aaccatcgtatcactacaaggatacaaaggcgcatttatgggcatgctactaatgtggct 345
             ||||||||| | ||||||||||||||||||||||||||||||||||| ||  ||||||  
Sbjct: 47719 aaccatcgtgttactacaaggatacaaaggcgcatttatgggcatgcaacagatgtggaa 47778

                                                                         
Query: 346   atcagacctttagatgaggagaaggcagtacaagttgctacagatctcattggagaaggc 405
             |||| ||||||| |||||||||| || ||||||| |||||| ||||||||||||||||||
Sbjct: 47779 atcacacctttaaatgaggagaaagctgtacaagctgctacggatctcattggagaaggc 47838

                           
Query: 406   ttcatcttttcggt 419
             || || ||||||||
Sbjct: 47839 tttattttttcggt 47852



 Score =  131 bits (66), Expect = 3e-27
 Identities = 87/94 (92%)
 Strand = Plus / Plus

                                                                         
Query: 412   ttttcggttgctgtcgctgctttaattttcgaggtgcaaaggagtgctaggtcagaggct 471
             |||| ||||||||| |||||||||||||| ||||||||||| | ||| ||||||||||||
Sbjct: 48004 ttttaggttgctgttgctgctttaatttttgaggtgcaaagaaatgcaaggtcagaggct 48063

                                               
Query: 472   agaaaggaggaagctcgtaaacaggaacttgagg 505
             || |||||||||||||||||||||||||||||||
Sbjct: 48064 aggaaggaggaagctcgtaaacaggaacttgagg 48097
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>ref|XM_465210.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1138

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 102/124 (82%), Gaps = 2/124 (1%)
 Strand = Plus / Plus

                                                                       
Query: 171 gaagctggggacgctgctgctgcggacgctgtccaagcctatcgccaaccgcctcaagag 230
           ||||||||||||||||  ||||  |||| |||| ||||| ||||||| ||||||||||| 
Sbjct: 229 gaagctggggacgctggcgctgaagacgatgtcgaagccgatcgccatccgcctcaagac 288

                                                                       
Query: 231 ccagg-cagccgtccaccccaagtttcgcgacttcatcatcagcatcgcccagacaaacc 289
             ||| |||||| ||||||  |||| ||| |  ||||||||| | ||||||||||||| |
Sbjct: 289 ggaggccagccg-ccaccctcagttccgccagctcatcatcaacctcgcccagacaaatc 347

               
Query: 290 atcg 293
           ||||
Sbjct: 348 atcg 351



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 63/76 (82%)
 Strand = Plus / Plus

                                                                       
Query: 415 tcggttgctgtcgctgctttaattttcgaggtgcaaaggagtgctaggtcagaggctaga 474
           ||||||||||  |||||| |||| || ||||||||||| || || ||||| |||||  ||
Sbjct: 473 tcggttgctggggctgctgtaatctttgaggtgcaaagaagcgcaaggtccgaggcccga 532

                           
Query: 475 aaggaggaagctcgta 490
           || ||||| |||||||
Sbjct: 533 aaagaggaggctcgta 548
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>dbj|AK100390.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023085P21, full
           insert sequence
          Length = 2682

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 102/124 (82%), Gaps = 2/124 (1%)
 Strand = Plus / Plus

                                                                       
Query: 171 gaagctggggacgctgctgctgcggacgctgtccaagcctatcgccaaccgcctcaagag 230
           ||||||||||||||||  ||||  |||| |||| ||||| ||||||| ||||||||||| 
Sbjct: 190 gaagctggggacgctggcgctgaagacgatgtcgaagccgatcgccatccgcctcaagac 249

                                                                       
Query: 231 ccagg-cagccgtccaccccaagtttcgcgacttcatcatcagcatcgcccagacaaacc 289
             ||| |||||| ||||||  |||| ||| |  ||||||||| | ||||||||||||| |
Sbjct: 250 ggaggccagccg-ccaccctcagttccgccagctcatcatcaacctcgcccagacaaatc 308

               
Query: 290 atcg 293
           ||||
Sbjct: 309 atcg 312



 Score = 44.1 bits (22), Expect = 0.51
 Identities = 61/74 (82%)
 Strand = Plus / Plus

                                                                       
Query: 417 ggttgctgtcgctgctttaattttcgaggtgcaaaggagtgctaggtcagaggctagaaa 476
           ||||||||  |||||| |||| || ||||||||||| || || ||||| |||||  ||||
Sbjct: 439 ggttgctggggctgctgtaatctttgaggtgcaaagaagcgcaaggtccgaggcccgaaa 498

                         
Query: 477 ggaggaagctcgta 490
            ||||| |||||||
Sbjct: 499 agaggaggctcgta 512
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>dbj|AK061035.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-A09, full
           insert sequence
          Length = 1138

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 102/124 (82%), Gaps = 2/124 (1%)
 Strand = Plus / Plus

                                                                       
Query: 171 gaagctggggacgctgctgctgcggacgctgtccaagcctatcgccaaccgcctcaagag 230
           ||||||||||||||||  ||||  |||| |||| ||||| ||||||| ||||||||||| 
Sbjct: 229 gaagctggggacgctggcgctgaagacgatgtcgaagccgatcgccatccgcctcaagac 288

                                                                       
Query: 231 ccagg-cagccgtccaccccaagtttcgcgacttcatcatcagcatcgcccagacaaacc 289
             ||| |||||| ||||||  |||| ||| |  ||||||||| | ||||||||||||| |
Sbjct: 289 ggaggccagccg-ccaccctcagttccgccagctcatcatcaacctcgcccagacaaatc 347

               
Query: 290 atcg 293
           ||||
Sbjct: 348 atcg 351



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 63/76 (82%)
 Strand = Plus / Plus

                                                                       
Query: 415 tcggttgctgtcgctgctttaattttcgaggtgcaaaggagtgctaggtcagaggctaga 474
           ||||||||||  |||||| |||| || ||||||||||| || || ||||| |||||  ||
Sbjct: 473 tcggttgctggggctgctgtaatctttgaggtgcaaagaagcgcaaggtccgaggcccga 532

                           
Query: 475 aaggaggaagctcgta 490
           || ||||| |||||||
Sbjct: 533 aaagaggaggctcgta 548
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                           
Query: 171      gaagctggggacgctgctgctgcggacgctgtccaagcctatcgccaaccgcctcaaga 229
                ||||||||||||||||  ||||  |||| |||| ||||| ||||||| |||||||||||
Sbjct: 12319575 gaagctggggacgctggcgctgaagacgatgtcgaagccgatcgccatccgcctcaaga 12319633



 Score = 44.1 bits (22), Expect = 0.51
 Identities = 61/74 (82%)
 Strand = Plus / Plus

                                                                            
Query: 417      ggttgctgtcgctgctttaattttcgaggtgcaaaggagtgctaggtcagaggctagaaa 476
                ||||||||  |||||| |||| || ||||||||||| || || ||||| |||||  ||||
Sbjct: 12320815 ggttgctggggctgctgtaatctttgaggtgcaaagaagcgcaaggtccgaggcccgaaa 12320874

                              
Query: 477      ggaggaagctcgta 490
                 ||||| |||||||
Sbjct: 12320875 agaggaggctcgta 12320888
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>dbj|AP004845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1233_A01
          Length = 98378

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                        
Query: 171   gaagctggggacgctgctgctgcggacgctgtccaagcctatcgccaaccgcctcaaga 229
             ||||||||||||||||  ||||  |||| |||| ||||| ||||||| |||||||||||
Sbjct: 81600 gaagctggggacgctggcgctgaagacgatgtcgaagccgatcgccatccgcctcaaga 81658



 Score = 44.1 bits (22), Expect = 0.51
 Identities = 61/74 (82%)
 Strand = Plus / Plus

                                                                         
Query: 417   ggttgctgtcgctgctttaattttcgaggtgcaaaggagtgctaggtcagaggctagaaa 476
             ||||||||  |||||| |||| || ||||||||||| || || ||||| |||||  ||||
Sbjct: 82840 ggttgctggggctgctgtaatctttgaggtgcaaagaagcgcaaggtccgaggcccgaaa 82899

                           
Query: 477   ggaggaagctcgta 490
              ||||| |||||||
Sbjct: 82900 agaggaggctcgta 82913
to top
>gb|AY110607.1| Zea mays CL3077_1 mRNA sequence
          Length = 920

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 54/63 (85%)
 Strand = Plus / Minus

                                                                       
Query: 242 tccaccccaagtttcgcgacttcatcatcagcatcgcccagacaaaccatcgtatcacta 301
           ||||||||||||| ||||   |||||||| ||||||| ||| ||||||||||| |||| |
Sbjct: 650 tccaccccaagttccgcggtctcatcatcggcatcgcgcaggcaaaccatcgtttcacga 591

              
Query: 302 caa 304
           |||
Sbjct: 590 caa 588



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 442 gaggtgcaaaggagtgctaggtcagaggctagaaaggagga 482
           ||||||||||| |||||||||||||| || ||||| |||||
Sbjct: 450 gaggtgcaaagaagtgctaggtcagaagccagaaaagagga 410
to top
>ref|NM_191261.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1134

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 242 tccaccccaagtttcgcgacttcatcatcagcatcgcccag 282
           ||||||||||||| |||| |||||||||| || ||||||||
Sbjct: 800 tccaccccaagttccgcggcttcatcatcggcctcgcccag 840
to top
>dbj|AP003268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0503C12
          Length = 147180

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                      
Query: 242   tccaccccaagtttcgcgacttcatcatcagcatcgcccag 282
             ||||||||||||| |||| |||||||||| || ||||||||
Sbjct: 14276 tccaccccaagttccgcggcttcatcatcggcctcgcccag 14236
to top
>dbj|AP003249.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0435B05
          Length = 150997

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                       
Query: 242    tccaccccaagtttcgcgacttcatcatcagcatcgcccag 282
              ||||||||||||| |||| |||||||||| || ||||||||
Sbjct: 113567 tccaccccaagttccgcggcttcatcatcggcctcgcccag 113527
to top
>gb|AE012222.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 130
            of 460 of the complete genome
          Length = 11629

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 152  tggccgcgctgccggtgatgaagctgg 178
            |||||||||||| ||||||||||||||
Sbjct: 3630 tggccgcgctgctggtgatgaagctgg 3604
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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 152     tggccgcgctgccggtgatgaagctgg 178
               |||||||||||| ||||||||||||||
Sbjct: 3605672 tggccgcgctgctggtgatgaagctgg 3605698
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>dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023
          Length = 2661830

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 168     gatgaagctggggacgctgctg 189
               ||||||||||||||||||||||
Sbjct: 1513747 gatgaagctggggacgctgctg 1513726
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 180     gacgctgctgctgcggacgctg 201
               ||||||||||||||||||||||
Sbjct: 6246589 gacgctgctgctgcggacgctg 6246568
to top
>dbj|AP004891.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
            clone:P0705A04
          Length = 182468

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 61/74 (82%)
 Strand = Plus / Plus

                                                                        
Query: 417  ggttgctgtcgctgctttaattttcgaggtgcaaaggagtgctaggtcagaggctagaaa 476
            ||||||||  |||||| |||| || ||||||||||| || || ||||| |||||  ||||
Sbjct: 952  ggttgctggggctgctgtaatctttgaggtgcaaagaagcgcaaggtccgaggcccgaaa 1011

                          
Query: 477  ggaggaagctcgta 490
             ||||| |||||||
Sbjct: 1012 agaggaggctcgta 1025
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>gb|BC094393.1| Mus musculus RIKEN cDNA 1110005A23 gene, mRNA (cDNA clone
           IMAGE:30550736), with apparent retained intron
          Length = 1097

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 552 caagctgaagcttgctgaact 572
           |||||||||||||||||||||
Sbjct: 31  caagctgaagcttgctgaact 51
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>ref|NM_025364.1| Mus musculus RIKEN cDNA 1110005A23 gene (1110005A23Rik), mRNA
          Length = 893

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 552 caagctgaagcttgctgaact 572
           |||||||||||||||||||||
Sbjct: 44  caagctgaagcttgctgaact 64
to top
>gb|AY593992.1| Homo sapiens upstream transcription factor 1 (USF1) gene, complete
            cds
          Length = 9549

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 396  tggagaaggcttcatcttttc 416
            |||||||||||||||||||||
Sbjct: 6744 tggagaaggcttcatcttttc 6764
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>ref|XM_991289.1| PREDICTED: Mus musculus similar to cytokine induced protein 29 kDa
           (LOC636633), mRNA
          Length = 866

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 552 caagctgaagcttgctgaact 572
           |||||||||||||||||||||
Sbjct: 63  caagctgaagcttgctgaact 83
to top
>ref|XM_924323.2| PREDICTED: Mus musculus similar to cytokine induced protein 29 kDa,
           transcript variant 2 (LOC636633), mRNA
          Length = 866

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 552 caagctgaagcttgctgaact 572
           |||||||||||||||||||||
Sbjct: 63  caagctgaagcttgctgaact 83
to top
>ref|XM_899946.2| PREDICTED: Mus musculus similar to cytokine induced protein 29 kDa,
           transcript variant 2 (LOC625193), mRNA
          Length = 866

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 552 caagctgaagcttgctgaact 572
           |||||||||||||||||||||
Sbjct: 63  caagctgaagcttgctgaact 83
to top
>gb|AC132088.4| Mus musculus BAC clone RP24-410M8 from chromosome 19, complete sequence
          Length = 159681

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 552   caagctgaagcttgctgaact 572
             |||||||||||||||||||||
Sbjct: 30738 caagctgaagcttgctgaact 30718
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>gb|AC134830.2| Mus musculus BAC clone RP24-498G16 from chromosome 19, complete
             sequence
          Length = 155666

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 552   caagctgaagcttgctgaact 572
             |||||||||||||||||||||
Sbjct: 27121 caagctgaagcttgctgaact 27141
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>emb|AL591806.16| Human DNA sequence from clone RP11-544M22 on chromosome 1 Contains the
             3' end of a novel gene, the 5' end of the ITLN2 gene for
             intelectin 2, the F11R gene for F11 receptor, the gene for
             KAT protein, the USF1 gene for upstream transcription
             factor 1, the gene for a novel protein, the PVRL4 gene for
             poliovirus receptor-related 4, a novel gene, the gene for
             a novel protein (MGC33338), the PFDN2 gene for prefoldin
             2, the NIT1 gene for nitrilase 1 and the DEDD gene for
             death effector domain containing, complete sequence
          Length = 200822

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 396   tggagaaggcttcatcttttc 416
             |||||||||||||||||||||
Sbjct: 94122 tggagaaggcttcatcttttc 94102
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>emb|AL589847.6| Human DNA sequence from clone RP13-477D10 on chromosome X, complete
             sequence
          Length = 103196

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 448   caaaggagtgctaggtcagag 468
             |||||||||||||||||||||
Sbjct: 85098 caaaggagtgctaggtcagag 85118
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>dbj|AK146248.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library,
           clone:I730042C22 product:Nuclear protein Hcc-1, full
           insert sequence
          Length = 919

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 552 caagctgaagcttgctgaact 572
           |||||||||||||||||||||
Sbjct: 70  caagctgaagcttgctgaact 90
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>gb|AC018691.10| Homo sapiens BAC clone RP11-547F10 from 2, complete sequence
          Length = 187298

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 395   ttggagaaggcttcatctttt 415
             |||||||||||||||||||||
Sbjct: 63796 ttggagaaggcttcatctttt 63776
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>dbj|AK003453.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length
           enriched library, clone:1110005A23 product:hypothetical
           SAP domain containing protein, full insert sequence
          Length = 893

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 552 caagctgaagcttgctgaact 572
           |||||||||||||||||||||
Sbjct: 44  caagctgaagcttgctgaact 64
to top
>dbj|AK088266.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN
           full-length enriched library, clone:E430008O03
           product:NUCLEAR PROTEIN HCC-1 homolog [Mus musculus],
           full insert sequence
          Length = 890

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 552 caagctgaagcttgctgaact 572
           |||||||||||||||||||||
Sbjct: 41  caagctgaagcttgctgaact 61
to top
>dbj|AK018773.1| Mus musculus adult male cerebellum cDNA, RIKEN full-length enriched
           library, clone:1500016M05 product:NUCLEAR PROTEIN HCC-1
           homolog [Mus musculus], full insert sequence
          Length = 620

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 552 caagctgaagcttgctgaact 572
           |||||||||||||||||||||
Sbjct: 55  caagctgaagcttgctgaact 75
to top
>gb|BC027510.1| Mus musculus RIKEN cDNA 1110005A23 gene, mRNA (cDNA clone MGC:41057
           IMAGE:1382354), complete cds
          Length = 908

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 552 caagctgaagcttgctgaact 572
           |||||||||||||||||||||
Sbjct: 31  caagctgaagcttgctgaact 51
to top
>gb|BC100070.1| Rattus norvegicus similar to RIKEN cDNA 1110005A23, mRNA (cDNA
           clone MGC:112623 IMAGE:7385206), complete cds
          Length = 1244

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 552 caagctgaagcttgctgaact 572
           |||||||||||||||||||||
Sbjct: 185 caagctgaagcttgctgaact 205
to top
>dbj|AB017568.1| Homo sapiens USF1 gene, complete cds
          Length = 9724

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 396  tggagaaggcttcatcttttc 416
            |||||||||||||||||||||
Sbjct: 8482 tggagaaggcttcatcttttc 8502
to top
>ref|NM_001033070.1| Rattus norvegicus similar to RIKEN cDNA 1110005A23 (RGD1305692),
           mRNA
          Length = 1244

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 552 caagctgaagcttgctgaact 572
           |||||||||||||||||||||
Sbjct: 185 caagctgaagcttgctgaact 205
to top
>gb|AY617967.1| Sterkiella histriomuscorum clone UGC1O0006_K18_F genomic sequence
          Length = 739

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 545 aagagctcaagctgaagctt 564
           ||||||||||||||||||||
Sbjct: 504 aagagctcaagctgaagctt 485
to top
>ref|XM_744626.1| Aspergillus fumigatus Af293 SIR2 family histone deacetylase
           (Afu2g05900) partial mRNA
          Length = 1278

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 491 aacaggaacttgaggaactg 510
           ||||||||||||||||||||
Sbjct: 827 aacaggaacttgaggaactg 846
to top
>emb|AL583840.10| Human DNA sequence from clone RP11-438N24 on chromosome 6, complete
             sequence
          Length = 82865

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 167   tgatgaagctggggacgctg 186
             ||||||||||||||||||||
Sbjct: 10638 tgatgaagctggggacgctg 10657
to top
>emb|AL589665.4| Human DNA sequence from clone RP11-123D12 on chromosome 1 Contains a
              neural precursor cell expressed developmentally
              down-regulated 5 (NEDD5) pseudogene, complete sequence
          Length = 132623

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 167    tgatgaagctggggacgctg 186
              ||||||||||||||||||||
Sbjct: 126354 tgatgaagctggggacgctg 126373
to top
>emb|AL390036.17| Human DNA sequence from clone RP11-356N1 on chromosome 1 Contains the
             3' end of a novel gene, a novel gene, the 3' end of the
             SLC25A24 gene for solute carrier family 25 (mitochondrial
             carrier; phosphate carrier) member 24 and two CpG islands,
             complete sequence
          Length = 183037

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 167   tgatgaagctggggacgctg 186
             ||||||||||||||||||||
Sbjct: 36644 tgatgaagctggggacgctg 36625
to top
>emb|AL390997.10| Human DNA sequence from clone RP11-159G6 on chromosome Xq21.33-23,
             complete sequence
          Length = 112328

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 530   tagctaaagatttagaagag 549
             ||||||||||||||||||||
Sbjct: 81593 tagctaaagatttagaagag 81612
to top
>emb|AL354796.21| Human DNA sequence from clone RP11-145E17 on chromosome 9 Contains the
              5'end of a novel gene (FLJ00318), a novel gene and two CpG
              islands, complete sequence
          Length = 156466

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 358    gatgaggagaaggcagtaca 377
              ||||||||||||||||||||
Sbjct: 146684 gatgaggagaaggcagtaca 146703
to top
>emb|AL137839.6| Human DNA sequence from clone RP3-471C18 on chromosome 6 Contains the
             3' end of two novel genes, complete sequence
          Length = 108793

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 513   acaaaaggaagagattttag 532
             ||||||||||||||||||||
Sbjct: 29254 acaaaaggaagagattttag 29273
to top
>gb|AC016939.8| Homo sapiens X BAC RP5-1014O16 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 118440

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 167   tgatgaagctggggacgctg 186
             ||||||||||||||||||||
Sbjct: 41900 tgatgaagctggggacgctg 41881
to top
>gb|DQ027015.1| Chlamydomonas reinhardtii MCD1 (MCD1) mRNA, complete cds
          Length = 5213

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 183  gctgctgctgcggacgctgt 202
            ||||||||||||||||||||
Sbjct: 3391 gctgctgctgcggacgctgt 3372
to top
>dbj|AP006861.1| Chlamydophila felis Fe/C-56 DNA, complete genome
          Length = 1166239

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 520     gaagagattttagctaaaga 539
               ||||||||||||||||||||
Sbjct: 1000758 gaagagattttagctaaaga 1000739
to top
>gb|DQ397553.1| Cenarchaeum symbiosum clone C07E08, complete sequence
          Length = 40832

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 154   gccgcgctgccggtgatgaagctg 177
             ||||||||||||||||| ||||||
Sbjct: 10172 gccgcgctgccggtgataaagctg 10149
to top
>gb|AC073063.12| Homo sapiens BAC clone RP11-136B3 from 7, complete sequence
          Length = 84113

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 553   aagctgaagcttgctgaact 572
             ||||||||||||||||||||
Sbjct: 72978 aagctgaagcttgctgaact 72997
to top
>dbj|AK156103.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
           library, clone:F830008B03 product:unclassifiable, full
           insert sequence
          Length = 2945

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 544 gaagagctcaagctgaagcttgct 567
           ||||||||||||||||||| ||||
Sbjct: 634 gaagagctcaagctgaagcatgct 611
to top
>gb|AC079345.5| Homo sapiens BAC clone RP11-181C18 from 4, complete sequence
          Length = 171325

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 508   ctgagacaaaaggaagagat 527
             ||||||||||||||||||||
Sbjct: 72089 ctgagacaaaaggaagagat 72070
to top
>gb|BC109532.1| Bos taurus cDNA clone MGC:133754 IMAGE:8056746, complete cds
          Length = 912

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 553 aagctgaagcttgctgaact 572
           ||||||||||||||||||||
Sbjct: 42  aagctgaagcttgctgaact 61
to top
>gb|AC150244.2| Medicago truncatula chromosome 7 BAC clone mth2-180p14, complete
            sequence
          Length = 115289

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 496  gaacttgaggaactgagaca 515
            ||||||||||||||||||||
Sbjct: 8305 gaacttgaggaactgagaca 8286
to top
>gb|AC146422.4| Pan troglodytes BAC clone RP43-27K9 from chromosome 7, complete sequence
          Length = 189507

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 553    aagctgaagcttgctgaact 572
              ||||||||||||||||||||
Sbjct: 134823 aagctgaagcttgctgaact 134804
to top
>gb|AC108051.3| Homo sapiens BAC clone RP11-332D2 from 2, complete sequence
          Length = 119875

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 167  tgatgaagctggggacgctg 186
            ||||||||||||||||||||
Sbjct: 4973 tgatgaagctggggacgctg 4954
to top
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 152    tggccgcgctgccggtgatg 171
              ||||||||||||||||||||
Sbjct: 322963 tggccgcgctgccggtgatg 322982
to top
>gb|AC007372.4|AC007372 Homo sapiens chromosome 14 BAC containing gene for type 2 iodothyronine
             deiodinase (DIO2) gene, complete CDS, complete sequence
          Length = 154796

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 167   tgatgaagctggggacgctg 186
             ||||||||||||||||||||
Sbjct: 76860 tgatgaagctggggacgctg 76841
to top
>gb|AC007157.6|AC007157 Homo sapiens, clone hRPK.78_A_1, complete sequence
          Length = 152937

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 167    tgatgaagctggggacgctg 186
              ||||||||||||||||||||
Sbjct: 139732 tgatgaagctggggacgctg 139751
to top
>emb|AL049837.4|CNS0000F Human chromosome 14 DNA sequence BAC R-959A22 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 168677

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 167   tgatgaagctggggacgctg 186
             ||||||||||||||||||||
Sbjct: 98292 tgatgaagctggggacgctg 98311
to top
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 152     tggccgcgctgccggtgatg 171
               ||||||||||||||||||||
Sbjct: 4660569 tggccgcgctgccggtgatg 4660588
to top
>gb|AC147644.3| Gallus gallus BAC clone CH261-77K20 from chromosome unknown, complete
             sequence
          Length = 191888

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 497   aacttgaggaactgagacaaaagg 520
             ||||||||||||||||| ||||||
Sbjct: 94716 aacttgaggaactgagagaaaagg 94693
to top
>gb|AC172101.1| Medicago truncatula chromosome 7 BAC clone mth2-29f3, complete sequence
          Length = 88313

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 496   gaacttgaggaactgagaca 515
             ||||||||||||||||||||
Sbjct: 86477 gaacttgaggaactgagaca 86458
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>emb|AL645856.5| Mouse DNA sequence from clone RP23-151N19 on chromosome 11, complete
              sequence
          Length = 116300

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 544    gaagagctcaagctgaagcttgct 567
              ||||||||||||||||||| ||||
Sbjct: 107521 gaagagctcaagctgaagcatgct 107498


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,462,383
Number of Sequences: 3902068
Number of extensions: 4462383
Number of successful extensions: 109365
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 108962
Number of HSP's gapped (non-prelim): 403
length of query: 587
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 564
effective length of database: 17,143,297,704
effective search space: 9668819905056
effective search space used: 9668819905056
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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