ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | basd18e06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DQ139268.1| Triticum aestivum geranylgeranyl hydrogenase mRNA, complete cds Length = 1704 Score = 1201 bits (606), Expect = 0.0 Identities = 648/662 (97%) Strand = Plus / Plus Query: 14 gaagttccaggccgccacccgcctccgcgccaaggacaagatcgagggcggcaagatcat 73 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 945 gaagttccaggccgccacccgcctccgcgccaaggataagatcgagggcggcaagatcat 1004 Query: 74 ccgcgtcgaggctcaccccatccccgagcaccccaggcccaagagggtgtcggggcgtgt 133 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1005 ccgcgtcgaggctcaccccatccccgagcaccccaggcccaagagggtgtcggggcgggt 1064 Query: 134 gacactggtcggcgacgcggcggggtacgtgaccaagtgctccggcgaggggatctactt 193 ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1065 gacgctggtgggcgacgcggcggggtacgtgaccaagtgctccggcgaggggatctactt 1124 Query: 194 cgcggccaagagcgggcggatgtgcgcggaggcgatcgtggcggggtcggcgaacgggac 253 |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1125 cgcggcgaagagcgggcggatgtgcgcggaggcgatcgtggccgggtcggcgaacgggac 1184 Query: 254 gcggctggtggacgagagcgacctgcgcaagtacctggcggagttcgaccggctctactg 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1185 gcggctggtggacgagagcgacctgcgcaagtacctggcggagttcgaccggctctactg 1244 Query: 314 gccgacgtacaaggtgctggacatcctgcagaaggtgttctaccgctccaacgcggcgcg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1245 gccgacgtacaaggtgctggacatcctgcagaaggtgttctaccgctccaacgcggcgcg 1304 Query: 374 ggaggcgttcgtggagatgtgcgccgacgactacgtgcagcggatgaccttcgacagcta 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1305 ggaggcgttcgtggagatgtgcgccgacgactacgtgcagcggatgaccttcgacagcta 1364 Query: 434 cctctacaagcgcgtcgtgccgggcaaccccatcgaggacatcaagctcgccgtcaacac 493 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1365 cctctacaagcgcgtcgtggcgggcaaccccatcgaggacatcaagctcgccgtcaacac 1424 Query: 494 catcggcagcctcgtcagggccaccgcgctgcgccgggagatggggaagctcaccttgtg 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1425 catcggcagcctcgtcagggccaccgcgctgcgccgggagatggggaagctcaccttgtg 1484 Query: 554 atcgccgacacaccggaaacgtccctgacatcctgcttgggttgctcgaagctgcggcgg 613 ||||||||| | |||||||||| ||||||| ||||||||||| ||||||||||||||||| Sbjct: 1485 atcgccgacccgccggaaacgttcctgacagcctgcttgggtcgctcgaagctgcggcgg 1544 Query: 614 atcgatcggtatagcagagatccgcggccgatcgaacggatttgaggcagaggagatgag 673 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1545 atcggtcggtatagcagagatccgcggctgatcgaacggatttgaggcagaggagatgag 1604 Query: 674 aa 675 || Sbjct: 1605 aa 1606
>gb|AY104414.1| Zea mays PCO077228 mRNA sequence Length = 1117 Score = 795 bits (401), Expect = 0.0 Identities = 506/541 (93%) Strand = Plus / Plus Query: 14 gaagttccaggccgccacccgcctccgcgccaaggacaagatcgagggcggcaagatcat 73 |||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 119 gaagtttcaggccgccacgcgcctccgcgccaaggacaagattgagggcggcaagatcat 178 Query: 74 ccgcgtcgaggctcaccccatccccgagcaccccaggcccaagagggtgtcggggcgtgt 133 |||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||| || Sbjct: 179 ccgcgtcgaggcgcaccccatccccgagcaccccaggcctaagagggtgtccgggcgggt 238 Query: 134 gacactggtcggcgacgcggcggggtacgtgaccaagtgctccggcgaggggatctactt 193 ||| ||||| ||||| || ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 239 gacgctggtgggcgatgccgcggggtacgtgaccaagtgctctggcgagggcatctactt 298 Query: 194 cgcggccaagagcgggcggatgtgcgcggaggcgatcgtggcggggtcggcgaacgggac 253 |||||| |||||||||||||||||||| ||||| ||||||||||| || || |||||||| Sbjct: 299 cgcggcgaagagcgggcggatgtgcgccgaggccatcgtggcgggctccgccaacgggac 358 Query: 254 gcggctggtggacgagagcgacctgcgcaagtacctggcggagttcgaccggctctactg 313 |||| ||||||| |||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 359 gcggatggtggaggagagcgacctgcgcaagtacctggccgagttcgaccgcctctactg 418 Query: 314 gccgacgtacaaggtgctggacatcctgcagaaggtgttctaccgctccaacgcggcgcg 373 ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 419 gcccacttacaaggtgctggacatcctgcagaaggtgttctaccgctccaacgcggcgcg 478 Query: 374 ggaggcgttcgtggagatgtgcgccgacgactacgtgcagcggatgaccttcgacagcta 433 ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 479 cgaggccttcgtggagatgtgcgccgacgactacgtgcagaagatgaccttcgacagcta 538 Query: 434 cctctacaagcgcgtcgtgccgggcaaccccatcgaggacatcaagctcgccgtcaacac 493 |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 539 cctctacaagcgcgtcgtgccgggcaacccgctcgacgacatcaagctcgccgtcaacac 598 Query: 494 catcggcagcctcgtcagggccaccgcgctgcgccgggagatggggaagctcaccttgtg 553 ||||||||||||||||||||||||||| |||||||||||||||| |||| |||||||||| Sbjct: 599 catcggcagcctcgtcagggccaccgcactgcgccgggagatggagaaggtcaccttgtg 658 Query: 554 a 554 | Sbjct: 659 a 659
>ref|XM_467759.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1778 Score = 763 bits (385), Expect = 0.0 Identities = 502/541 (92%) Strand = Plus / Plus Query: 14 gaagttccaggccgccacccgcctccgcgccaaggacaagatcgagggcggcaagatcat 73 |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| Sbjct: 932 gaagttccaggccgccacccgccttcgcgccaaggaccggatcgagggcggcaagatcat 991 Query: 74 ccgcgtcgaggctcaccccatccccgagcaccccaggcccaagagggtgtcggggcgtgt 133 ||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||| | || Sbjct: 992 ccgcgtcgaggctcaccccatccccgagcacccgaggcctaagagggtggcggggagggt 1051 Query: 134 gacactggtcggcgacgcggcggggtacgtgaccaagtgctccggcgaggggatctactt 193 ||| ||||| || |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1052 gacgctggtgggggacgcggcggggtacgtgacaaagtgctccggcgaggggatctactt 1111 Query: 194 cgcggccaagagcgggcggatgtgcgcggaggcgatcgtggcggggtcggcgaacgggac 253 |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1112 cgcggcgaagagcgggcggatgtgcgcggaggcgatcgtggccgggtcggcgaacgggac 1171 Query: 254 gcggctggtggacgagagcgacctgcgcaagtacctggcggagttcgaccggctctactg 313 |||| ||||||| |||||||||||||||| ||||||||| ||||||||||| |||||||| Sbjct: 1172 gcggatggtggaggagagcgacctgcgcaggtacctggccgagttcgaccgcctctactg 1231 Query: 314 gccgacgtacaaggtgctggacatcctgcagaaggtgttctaccgctccaacgcggcgcg 373 |||||||||||||||||| ||| | || |||||||||||||||||||||||||| || || Sbjct: 1232 gccgacgtacaaggtgctcgacgtgctccagaaggtgttctaccgctccaacgccgcccg 1291 Query: 374 ggaggcgttcgtggagatgtgcgccgacgactacgtgcagcggatgaccttcgacagcta 433 ||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||| Sbjct: 1292 cgaggcgttcgtcgagatgtgcgccgacgactacgtccagaggatgaccttcgacagcta 1351 Query: 434 cctctacaagcgcgtcgtgccgggcaaccccatcgaggacatcaagctcgccgtcaacac 493 |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 1352 cctctacaagcgcgtcgtgccgggcaacccgctcgacgacatcaagctcgccgtcaacac 1411 Query: 494 catcggcagcctcgtcagggccaccgcgctgcgccgggagatggggaagctcaccttgtg 553 |||||||||||||||| | |||||||| || ||||| ||||||| |||| |||||||||| Sbjct: 1412 catcggcagcctcgtccgcgccaccgccctccgccgcgagatggagaaggtcaccttgtg 1471 Query: 554 a 554 | Sbjct: 1472 a 1472
>ref|XM_506969.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1734_E02.38 mRNA Length = 1828 Score = 763 bits (385), Expect = 0.0 Identities = 502/541 (92%) Strand = Plus / Plus Query: 14 gaagttccaggccgccacccgcctccgcgccaaggacaagatcgagggcggcaagatcat 73 |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| Sbjct: 932 gaagttccaggccgccacccgccttcgcgccaaggaccggatcgagggcggcaagatcat 991 Query: 74 ccgcgtcgaggctcaccccatccccgagcaccccaggcccaagagggtgtcggggcgtgt 133 ||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||| | || Sbjct: 992 ccgcgtcgaggctcaccccatccccgagcacccgaggcctaagagggtggcggggagggt 1051 Query: 134 gacactggtcggcgacgcggcggggtacgtgaccaagtgctccggcgaggggatctactt 193 ||| ||||| || |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1052 gacgctggtgggggacgcggcggggtacgtgacaaagtgctccggcgaggggatctactt 1111 Query: 194 cgcggccaagagcgggcggatgtgcgcggaggcgatcgtggcggggtcggcgaacgggac 253 |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1112 cgcggcgaagagcgggcggatgtgcgcggaggcgatcgtggccgggtcggcgaacgggac 1171 Query: 254 gcggctggtggacgagagcgacctgcgcaagtacctggcggagttcgaccggctctactg 313 |||| ||||||| |||||||||||||||| ||||||||| ||||||||||| |||||||| Sbjct: 1172 gcggatggtggaggagagcgacctgcgcaggtacctggccgagttcgaccgcctctactg 1231 Query: 314 gccgacgtacaaggtgctggacatcctgcagaaggtgttctaccgctccaacgcggcgcg 373 |||||||||||||||||| ||| | || |||||||||||||||||||||||||| || || Sbjct: 1232 gccgacgtacaaggtgctcgacgtgctccagaaggtgttctaccgctccaacgccgcccg 1291 Query: 374 ggaggcgttcgtggagatgtgcgccgacgactacgtgcagcggatgaccttcgacagcta 433 ||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||| Sbjct: 1292 cgaggcgttcgtcgagatgtgcgccgacgactacgtccagaggatgaccttcgacagcta 1351 Query: 434 cctctacaagcgcgtcgtgccgggcaaccccatcgaggacatcaagctcgccgtcaacac 493 |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 1352 cctctacaagcgcgtcgtgccgggcaacccgctcgacgacatcaagctcgccgtcaacac 1411 Query: 494 catcggcagcctcgtcagggccaccgcgctgcgccgggagatggggaagctcaccttgtg 553 |||||||||||||||| | |||||||| || ||||| ||||||| |||| |||||||||| Sbjct: 1412 catcggcagcctcgtccgcgccaccgccctccgccgcgagatggagaaggtcaccttgtg 1471 Query: 554 a 554 | Sbjct: 1472 a 1472
>dbj|AK061968.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-H01, full insert sequence Length = 1828 Score = 763 bits (385), Expect = 0.0 Identities = 502/541 (92%) Strand = Plus / Plus Query: 14 gaagttccaggccgccacccgcctccgcgccaaggacaagatcgagggcggcaagatcat 73 |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| Sbjct: 932 gaagttccaggccgccacccgccttcgcgccaaggaccggatcgagggcggcaagatcat 991 Query: 74 ccgcgtcgaggctcaccccatccccgagcaccccaggcccaagagggtgtcggggcgtgt 133 ||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||| | || Sbjct: 992 ccgcgtcgaggctcaccccatccccgagcacccgaggcctaagagggtggcggggagggt 1051 Query: 134 gacactggtcggcgacgcggcggggtacgtgaccaagtgctccggcgaggggatctactt 193 ||| ||||| || |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1052 gacgctggtgggggacgcggcggggtacgtgacaaagtgctccggcgaggggatctactt 1111 Query: 194 cgcggccaagagcgggcggatgtgcgcggaggcgatcgtggcggggtcggcgaacgggac 253 |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1112 cgcggcgaagagcgggcggatgtgcgcggaggcgatcgtggccgggtcggcgaacgggac 1171 Query: 254 gcggctggtggacgagagcgacctgcgcaagtacctggcggagttcgaccggctctactg 313 |||| ||||||| |||||||||||||||| ||||||||| ||||||||||| |||||||| Sbjct: 1172 gcggatggtggaggagagcgacctgcgcaggtacctggccgagttcgaccgcctctactg 1231 Query: 314 gccgacgtacaaggtgctggacatcctgcagaaggtgttctaccgctccaacgcggcgcg 373 |||||||||||||||||| ||| | || |||||||||||||||||||||||||| || || Sbjct: 1232 gccgacgtacaaggtgctcgacgtgctccagaaggtgttctaccgctccaacgccgcccg 1291 Query: 374 ggaggcgttcgtggagatgtgcgccgacgactacgtgcagcggatgaccttcgacagcta 433 ||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||| Sbjct: 1292 cgaggcgttcgtcgagatgtgcgccgacgactacgtccagaggatgaccttcgacagcta 1351 Query: 434 cctctacaagcgcgtcgtgccgggcaaccccatcgaggacatcaagctcgccgtcaacac 493 |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 1352 cctctacaagcgcgtcgtgccgggcaacccgctcgacgacatcaagctcgccgtcaacac 1411 Query: 494 catcggcagcctcgtcagggccaccgcgctgcgccgggagatggggaagctcaccttgtg 553 |||||||||||||||| | |||||||| || ||||| ||||||| |||| |||||||||| Sbjct: 1412 catcggcagcctcgtccgcgccaccgccctccgccgcgagatggagaaggtcaccttgtg 1471 Query: 554 a 554 | Sbjct: 1472 a 1472
>dbj|AK098873.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C18, full insert sequence Length = 1778 Score = 755 bits (381), Expect = 0.0 Identities = 501/541 (92%) Strand = Plus / Plus Query: 14 gaagttccaggccgccacccgcctccgcgccaaggacaagatcgagggcggcaagatcat 73 |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| Sbjct: 933 gaagttccaggccgccacccgccttcgcgccaaggaccggatcgagggcggcaagatcat 992 Query: 74 ccgcgtcgaggctcaccccatccccgagcaccccaggcccaagagggtgtcggggcgtgt 133 ||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||| | || Sbjct: 993 ccgcgtcgaggctcaccccatccccgagcacccgaggcctaagagggtggcggggagggt 1052 Query: 134 gacactggtcggcgacgcggcggggtacgtgaccaagtgctccggcgaggggatctactt 193 ||| ||||| || |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1053 gacgctggtgggggacgcggcggggtacgtgacaaagtgctccggcgaggggatctactt 1112 Query: 194 cgcggccaagagcgggcggatgtgcgcggaggcgatcgtggcggggtcggcgaacgggac 253 |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1113 cgcggcgaagagcgggcggatgtgcgcggaggcgatcgtggccgggtcggcgaacgggac 1172 Query: 254 gcggctggtggacgagagcgacctgcgcaagtacctggcggagttcgaccggctctactg 313 |||| ||||||| |||||||||||||||| ||||||||| ||||||||||| |||||||| Sbjct: 1173 gcggatggtggaggagagcgacctgcgcaggtacctggccgagttcgaccgcctctactg 1232 Query: 314 gccgacgtacaaggtgctggacatcctgcagaaggtgttctaccgctccaacgcggcgcg 373 |||||||||||||||||| ||| | || |||||||||||||||||||||||||| || || Sbjct: 1233 gccgacgtacaaggtgctcgacgtgctccagaaggtgttctaccgctccaacgccgcccg 1292 Query: 374 ggaggcgttcgtggagatgtgcgccgacgactacgtgcagcggatgaccttcgacagcta 433 |||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||| Sbjct: 1293 cgaggcgttcgacgagatgtgcgccgacgactacgtccagaggatgaccttcgacagcta 1352 Query: 434 cctctacaagcgcgtcgtgccgggcaaccccatcgaggacatcaagctcgccgtcaacac 493 |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 1353 cctctacaagcgcgtcgtgccgggcaacccgctcgacgacatcaagctcgccgtcaacac 1412 Query: 494 catcggcagcctcgtcagggccaccgcgctgcgccgggagatggggaagctcaccttgtg 553 |||||||||||||||| | |||||||| || ||||| ||||||| |||| |||||||||| Sbjct: 1413 catcggcagcctcgtccgcgccaccgccctccgccgcgagatggagaaggtcaccttgtg 1472 Query: 554 a 554 | Sbjct: 1473 a 1473
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 599 bits (302), Expect = e-168 Identities = 404/438 (92%) Strand = Plus / Plus Query: 117 agggtgtcggggcgtgtgacactggtcggcgacgcggcggggtacgtgaccaagtgctcc 176 |||||| ||||| | ||||| ||||| || |||||||||||||||||||| ||||||||| Sbjct: 31266501 agggtggcggggagggtgacgctggtgggggacgcggcggggtacgtgacaaagtgctcc 31266560 Query: 177 ggcgaggggatctacttcgcggccaagagcgggcggatgtgcgcggaggcgatcgtggcg 236 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 31266561 ggcgaggggatctacttcgcggcgaagagcgggcggatgtgcgcggaggcgatcgtggcc 31266620 Query: 237 gggtcggcgaacgggacgcggctggtggacgagagcgacctgcgcaagtacctggcggag 296 ||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||| ||| Sbjct: 31266621 gggtcggcgaacgggacgcggatggtggaggagagcgacctgcgcaggtacctggccgag 31266680 Query: 297 ttcgaccggctctactggccgacgtacaaggtgctggacatcctgcagaaggtgttctac 356 |||||||| |||||||||||||||||||||||||| ||| | || ||||||||||||||| Sbjct: 31266681 ttcgaccgcctctactggccgacgtacaaggtgctcgacgtgctccagaaggtgttctac 31266740 Query: 357 cgctccaacgcggcgcgggaggcgttcgtggagatgtgcgccgacgactacgtgcagcgg 416 ||||||||||| || || ||||||||||| ||||||||||||||||||||||| ||| || Sbjct: 31266741 cgctccaacgccgcccgcgaggcgttcgtcgagatgtgcgccgacgactacgtccagagg 31266800 Query: 417 atgaccttcgacagctacctctacaagcgcgtcgtgccgggcaaccccatcgaggacatc 476 ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 31266801 atgaccttcgacagctacctctacaagcgcgtcgtgccgggcaacccgctcgacgacatc 31266860 Query: 477 aagctcgccgtcaacaccatcggcagcctcgtcagggccaccgcgctgcgccgggagatg 536 ||||||||||||||||||||||||||||||||| | |||||||| || ||||| |||||| Sbjct: 31266861 aagctcgccgtcaacaccatcggcagcctcgtccgcgccaccgccctccgccgcgagatg 31266920 Query: 537 gggaagctcaccttgtga 554 | |||| ||||||||||| Sbjct: 31266921 gagaaggtcaccttgtga 31266938 Score = 170 bits (86), Expect = 4e-39 Identities = 101/106 (95%) Strand = Plus / Plus Query: 14 gaagttccaggccgccacccgcctccgcgccaaggacaagatcgagggcggcaagatcat 73 |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| Sbjct: 31266313 gaagttccaggccgccacccgccttcgcgccaaggaccggatcgagggcggcaagatcat 31266372 Query: 74 ccgcgtcgaggctcaccccatccccgagcaccccaggcccaagagg 119 ||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 31266373 ccgcgtcgaggctcaccccatccccgagcacccgaggcctaagagg 31266418
>dbj|AP005297.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1734_E02 Length = 168566 Score = 599 bits (302), Expect = e-168 Identities = 404/438 (92%) Strand = Plus / Plus Query: 117 agggtgtcggggcgtgtgacactggtcggcgacgcggcggggtacgtgaccaagtgctcc 176 |||||| ||||| | ||||| ||||| || |||||||||||||||||||| ||||||||| Sbjct: 146344 agggtggcggggagggtgacgctggtgggggacgcggcggggtacgtgacaaagtgctcc 146403 Query: 177 ggcgaggggatctacttcgcggccaagagcgggcggatgtgcgcggaggcgatcgtggcg 236 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 146404 ggcgaggggatctacttcgcggcgaagagcgggcggatgtgcgcggaggcgatcgtggcc 146463 Query: 237 gggtcggcgaacgggacgcggctggtggacgagagcgacctgcgcaagtacctggcggag 296 ||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||| ||| Sbjct: 146464 gggtcggcgaacgggacgcggatggtggaggagagcgacctgcgcaggtacctggccgag 146523 Query: 297 ttcgaccggctctactggccgacgtacaaggtgctggacatcctgcagaaggtgttctac 356 |||||||| |||||||||||||||||||||||||| ||| | || ||||||||||||||| Sbjct: 146524 ttcgaccgcctctactggccgacgtacaaggtgctcgacgtgctccagaaggtgttctac 146583 Query: 357 cgctccaacgcggcgcgggaggcgttcgtggagatgtgcgccgacgactacgtgcagcgg 416 ||||||||||| || || ||||||||||| ||||||||||||||||||||||| ||| || Sbjct: 146584 cgctccaacgccgcccgcgaggcgttcgtcgagatgtgcgccgacgactacgtccagagg 146643 Query: 417 atgaccttcgacagctacctctacaagcgcgtcgtgccgggcaaccccatcgaggacatc 476 ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 146644 atgaccttcgacagctacctctacaagcgcgtcgtgccgggcaacccgctcgacgacatc 146703 Query: 477 aagctcgccgtcaacaccatcggcagcctcgtcagggccaccgcgctgcgccgggagatg 536 ||||||||||||||||||||||||||||||||| | |||||||| || ||||| |||||| Sbjct: 146704 aagctcgccgtcaacaccatcggcagcctcgtccgcgccaccgccctccgccgcgagatg 146763 Query: 537 gggaagctcaccttgtga 554 | |||| ||||||||||| Sbjct: 146764 gagaaggtcaccttgtga 146781 Score = 170 bits (86), Expect = 4e-39 Identities = 101/106 (95%) Strand = Plus / Plus Query: 14 gaagttccaggccgccacccgcctccgcgccaaggacaagatcgagggcggcaagatcat 73 |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| Sbjct: 146156 gaagttccaggccgccacccgccttcgcgccaaggaccggatcgagggcggcaagatcat 146215 Query: 74 ccgcgtcgaggctcaccccatccccgagcaccccaggcccaagagg 119 ||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 146216 ccgcgtcgaggctcaccccatccccgagcacccgaggcctaagagg 146261
>dbj|AP004114.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1118_G04 Length = 134464 Score = 599 bits (302), Expect = e-168 Identities = 404/438 (92%) Strand = Plus / Plus Query: 117 agggtgtcggggcgtgtgacactggtcggcgacgcggcggggtacgtgaccaagtgctcc 176 |||||| ||||| | ||||| ||||| || |||||||||||||||||||| ||||||||| Sbjct: 36369 agggtggcggggagggtgacgctggtgggggacgcggcggggtacgtgacaaagtgctcc 36428 Query: 177 ggcgaggggatctacttcgcggccaagagcgggcggatgtgcgcggaggcgatcgtggcg 236 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 36429 ggcgaggggatctacttcgcggcgaagagcgggcggatgtgcgcggaggcgatcgtggcc 36488 Query: 237 gggtcggcgaacgggacgcggctggtggacgagagcgacctgcgcaagtacctggcggag 296 ||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||| ||| Sbjct: 36489 gggtcggcgaacgggacgcggatggtggaggagagcgacctgcgcaggtacctggccgag 36548 Query: 297 ttcgaccggctctactggccgacgtacaaggtgctggacatcctgcagaaggtgttctac 356 |||||||| |||||||||||||||||||||||||| ||| | || ||||||||||||||| Sbjct: 36549 ttcgaccgcctctactggccgacgtacaaggtgctcgacgtgctccagaaggtgttctac 36608 Query: 357 cgctccaacgcggcgcgggaggcgttcgtggagatgtgcgccgacgactacgtgcagcgg 416 ||||||||||| || || ||||||||||| ||||||||||||||||||||||| ||| || Sbjct: 36609 cgctccaacgccgcccgcgaggcgttcgtcgagatgtgcgccgacgactacgtccagagg 36668 Query: 417 atgaccttcgacagctacctctacaagcgcgtcgtgccgggcaaccccatcgaggacatc 476 ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 36669 atgaccttcgacagctacctctacaagcgcgtcgtgccgggcaacccgctcgacgacatc 36728 Query: 477 aagctcgccgtcaacaccatcggcagcctcgtcagggccaccgcgctgcgccgggagatg 536 ||||||||||||||||||||||||||||||||| | |||||||| || ||||| |||||| Sbjct: 36729 aagctcgccgtcaacaccatcggcagcctcgtccgcgccaccgccctccgccgcgagatg 36788 Query: 537 gggaagctcaccttgtga 554 | |||| ||||||||||| Sbjct: 36789 gagaaggtcaccttgtga 36806 Score = 170 bits (86), Expect = 4e-39 Identities = 101/106 (95%) Strand = Plus / Plus Query: 14 gaagttccaggccgccacccgcctccgcgccaaggacaagatcgagggcggcaagatcat 73 |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| Sbjct: 36181 gaagttccaggccgccacccgccttcgcgccaaggaccggatcgagggcggcaagatcat 36240 Query: 74 ccgcgtcgaggctcaccccatccccgagcaccccaggcccaagagg 119 ||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 36241 ccgcgtcgaggctcaccccatccccgagcacccgaggcctaagagg 36286
>gb|AF069318.1|AF069318 Mesembryanthemum crystallinum geranylgeranyl hydrogenase mRNA, complete cds Length = 1639 Score = 232 bits (117), Expect = 1e-57 Identities = 324/393 (82%) Strand = Plus / Plus Query: 42 gccaaggacaagatcgagggcggcaagatcatccgcgtcgaggctcaccccatccccgag 101 |||| |||||||||| |||| || ||||||||||| || ||||||||||| ||||| ||| Sbjct: 927 gccatggacaagatccagggtggaaagatcatccgggtagaggctcaccctatcccagag 986 Query: 102 caccccaggcccaagagggtgtcggggcgtgtgacactggtcggcgacgcggcggggtac 161 ||||| ||||| ||||||||| | || || || |||| || |||||||| ||||| Sbjct: 987 cacccaaggccaaagagggtgcttgatcgggttgcattggttggggacgcggctgggtat 1046 Query: 162 gtgaccaagtgctccggcgaggggatctacttcgcggccaagagcgggcggatgtgcgcg 221 |||||||||||||| || |||||||||||||| ||||||||||| |||||||||||||| Sbjct: 1047 gtgaccaagtgctcaggtgaggggatctactttgcggccaagagtgggcggatgtgcgca 1106 Query: 222 gaggcgatcgtggcggggtcggcgaacgggacgcggctggtggacgagagcgacctgcgc 281 |||||||| |||| ||| || || || |||| | || ||||||||||| |||||| | Sbjct: 1107 gaggcgattgtggagggatccgccaatgggaagaggatggtggacgagtcggacctgagg 1166 Query: 282 aagtacctggcggagttcgaccggctctactggccgacgtacaaggtgctggacatcctg 341 |||||| ||| | ||| ||| | |||||||| || |||||||| || || || ||| Sbjct: 1167 aagtacttggagaagtgggacaagaagtactggcctacctacaaggtccttgatattctg 1226 Query: 342 cagaaggtgttctaccgctccaacgcggcgcgggaggcgttcgtggagatgtgcgccgac 401 |||||||||||||||||||||||| |||| | |||||||||||||||||||| || ||| Sbjct: 1227 cagaaggtgttctaccgctccaacccggcaagagaggcgttcgtggagatgtgtgcggac 1286 Query: 402 gactacgtgcagcggatgaccttcgacagctac 434 || || |||||| ||||||||| ||||||||| Sbjct: 1287 gagtatgtgcagaagatgacctttgacagctac 1319
>gb|AF055296.1|AF055296 Zantedeschia aethiopica geranylgeranyl reductase mRNA, partial cds Length = 995 Score = 226 bits (114), Expect = 7e-56 Identities = 177/198 (89%) Strand = Plus / Plus Query: 309 tactggccgacgtacaaggtgctggacatcctgcagaaggtgttctaccgctccaacgcg 368 ||||||||||||||||||||||||||| | |||||||||||||||||||||||||| | Sbjct: 610 tactggccgacgtacaaggtgctggacgtgctgcagaaggtgttctaccgctccaatccc 669 Query: 369 gcgcgggaggcgttcgtggagatgtgcgccgacgactacgtgcagcggatgaccttcgac 428 || |||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 670 gcccgggaggccttcgtggagatgtgcgccgacgagtacgtgcagaagatgaccttcgac 729 Query: 429 agctacctctacaagcgcgtcgtgccgggcaaccccatcgaggacatcaagctcgccgtc 488 |||||||| |||||||| || || || |||| |||| | |||||| ||||||| |||||| Sbjct: 730 agctacctgtacaagcgggtggtccccggcagccccctggaggacctcaagcttgccgtc 789 Query: 489 aacaccatcggcagcctc 506 || ||||||||||||||| Sbjct: 790 aagaccatcggcagcctc 807 Score = 139 bits (70), Expect = 1e-29 Identities = 97/106 (91%) Strand = Plus / Plus Query: 138 ctggtcggcgacgcggcggggtacgtgaccaagtgctccggcgaggggatctacttcgcg 197 ||||| || ||||| || ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 439 ctggtgggggacgctgccgggtacgtgaccaagtgctccggcgagggcatctacttcgcg 498 Query: 198 gccaagagcgggcggatgtgcgcggaggcgatcgtggcggggtcgg 243 ||||||||||||||||||||||||||||| ||| ||| ||| |||| Sbjct: 499 gccaagagcgggcggatgtgcgcggaggccatcttggagggttcgg 544 Score = 99.6 bits (50), Expect = 1e-17 Identities = 80/90 (88%) Strand = Plus / Plus Query: 18 ttccaggccgccacccgcctccgcgccaaggacaagatcgagggcggcaagatcatccgc 77 |||||||||||||||||||| |||||| |||||||||||||||||| ||| ||||| Sbjct: 319 ttccaggccgccacccgcctgcgcgccggcgacaagatcgagggcggccgcatcctccgc 378 Query: 78 gtcgaggctcaccccatccccgagcacccc 107 |||||||| || |||||||||||||||||| Sbjct: 379 gtcgaggcccatcccatccccgagcacccc 408
>dbj|AK108809.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-151-D09, full insert sequence Length = 2726 Score = 117 bits (59), Expect = 5e-23 Identities = 122/143 (85%) Strand = Plus / Plus Query: 321 tacaaggtgctggacatcctgcagaaggtgttctaccgctccaacgcggcgcgggaggcg 380 ||||||||||||||||||||||||||||||||||||||| |||| | || || ||||| Sbjct: 1285 tacaaggtgctggacatcctgcagaaggtgttctaccgcagcaacccagctcgcgaggcc 1344 Query: 381 ttcgtggagatgtgcgccgacgactacgtgcagcggatgaccttcgacagctacctctac 440 || ||||||||||||| ||| |||||||||| ||||||||| |||||||| || ||| Sbjct: 1345 tttgtggagatgtgcgaggacagctacgtgcagaagatgacctttgacagctatctgtac 1404 Query: 441 aagcgcgtcgtgccgggcaaccc 463 ||| |||||||| |||||||| Sbjct: 1405 aagactgtcgtgccaggcaaccc 1427 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 159 tacgtgaccaagtgctccggcgaggggatctacttcgcggccaag 203 ||||| ||||||||||| |||||||| ||||||||||| |||||| Sbjct: 1123 tacgtcaccaagtgctcaggcgagggcatctacttcgcagccaag 1167 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 57 gagggcggcaagatcatccgcgtcgaggctcaccccatccccgagcaccccaggccc 113 |||||||||||||||||| | || ||||| || |||||||| ||||||||| ||||| Sbjct: 1021 gagggcggcaagatcatcagggttgaggcccatcccatcccggagcacccccggccc 1077
>gb|AF545585.1| Xerophyta humilis geranyl-geranyl reductase mRNA, partial cds Length = 653 Score = 111 bits (56), Expect = 3e-21 Identities = 65/68 (95%) Strand = Plus / Plus Query: 159 tacgtgaccaagtgctccggcgaggggatctacttcgcggccaagagcgggcggatgtgc 218 |||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 214 tacgtgacaaagtgctccggcgaggggatctacttcgcggcaaagagcgggcgtatgtgc 273 Query: 219 gcggaggc 226 |||||||| Sbjct: 274 gcggaggc 281 Score = 103 bits (52), Expect = 7e-19 Identities = 154/188 (81%) Strand = Plus / Plus Query: 309 tactggccgacgtacaaggtgctggacatcctgcagaaggtgttctaccgctccaacgcg 368 |||||||||||||| |||||||| ||| | ||||||||||||||||||| || ||| || Sbjct: 364 tactggccgacgtataaggtgctcgacgtattgcagaaggtgttctaccggtcgaacccg 423 Query: 369 gcgcgggaggcgttcgtggagatgtgcgccgacgactacgtgcagcggatgaccttcgac 428 ||| ||||||| ||||| ||||||||||||||| | || || ||| |||||| || ||| Sbjct: 424 gcgagggaggccttcgtcgagatgtgcgccgacaagtatgttcagaagatgacgtttgac 483 Query: 429 agctacctctacaagcgcgtcgtgccgggcaaccccatcgaggacatcaagctcgccgtc 488 |||||| | |||||| || ||||| || |||||||| || || ||||||| || || Sbjct: 484 agctacttgtacaagaaagttgtgccagggaaccccattgacgatctcaagcttgctgtg 543 Query: 489 aacaccat 496 |||||||| Sbjct: 544 aacaccat 551 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 51 aagatcgagggcggcaagatcatccgcgtcgaggctcaccccatccccgagcaccccag 109 |||||||| ||||| |||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 106 aagatcgaaggcgggaagatcatccgcgtcgaggcccaccccatcccagagcaccccag 164
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 93.7 bits (47), Expect = 7e-16 Identities = 104/123 (84%) Strand = Plus / Minus Query: 321 tacaaggtgctggacatcctgcagaaggtgttctaccgctccaacgcggcgcgggaggcg 380 |||||||| |||||||||||||| |||||||||||| ||||| || | || || || Sbjct: 1845009 tacaaggtcttggacatcctgcagcgggtgttctaccgttccaatgccacccgcgaagcc 1844950 Query: 381 ttcgtggagatgtgcgccgacgactacgtgcagcggatgaccttcgacagctacctctac 440 || |||||||||||||||||| |||||||| |||||||||| ||||||||||||||| Sbjct: 1844949 tttgtggagatgtgcgccgaccgggacgtgcagaggatgacctttgacagctacctctac 1844890 Query: 441 aag 443 ||| Sbjct: 1844889 aag 1844887
>ref|NM_187998.1| Oryza sativa (japonica cultivar-group), Ozsa8418 predicted mRNA Length = 1359 Score = 81.8 bits (41), Expect = 3e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 141 gtcggcgacgcggcggggtacgtgaccaagtgctccggcgaggggatctacttcgcggcc 200 ||||||||||||||||| ||||| ||| ||||||||||||||| ||||||||||||||| Sbjct: 922 gtcggcgacgcggcgggctacgtcacccggtgctccggcgagggcatctacttcgcggcc 981 Query: 201 a 201 | Sbjct: 982 a 982 Score = 65.9 bits (33), Expect = 2e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 373 gggaggcgttcgtggagatgtgcgccgacgactacgtgcagcggatgaccttcgacagct 432 |||||||| | |||||||||||||||||||| |||||||||| ||| |||||||||| Sbjct: 1154 gggaggcgctggtggagatgtgcgccgacgagcacgtgcagcgccggacgttcgacagct 1213 Query: 433 acctctacaagcg 445 |||| ||||||| Sbjct: 1214 acctgcacaagcg 1226
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 81.8 bits (41), Expect = 3e-12 Identities = 83/97 (85%) Strand = Plus / Plus Query: 347 ggtgttctaccgctccaacgcggcgcgggaggcgttcgtggagatgtgcgccgacgacta 406 |||||||||||| |||||||| | || ||||| || |||||||||||||| ||| | Sbjct: 69622 ggtgttctaccgttccaacgccacccgcgaggcctttgtggagatgtgcgctgaccggga 69681 Query: 407 cgtgcagcggatgaccttcgacagctacctctacaag 443 ||||||||||||||||| |||||||||||||||||| Sbjct: 69682 tgtgcagcggatgacctttgacagctacctctacaag 69718
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 81.8 bits (41), Expect = 3e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 141 gtcggcgacgcggcggggtacgtgaccaagtgctccggcgaggggatctacttcgcggcc 200 ||||||||||||||||| ||||| ||| ||||||||||||||| ||||||||||||||| Sbjct: 9018132 gtcggcgacgcggcgggctacgtcacccggtgctccggcgagggcatctacttcgcggcc 9018191 Query: 201 a 201 | Sbjct: 9018192 a 9018192 Score = 65.9 bits (33), Expect = 2e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 373 gggaggcgttcgtggagatgtgcgccgacgactacgtgcagcggatgaccttcgacagct 432 |||||||| | |||||||||||||||||||| |||||||||| ||| |||||||||| Sbjct: 9018364 gggaggcgctggtggagatgtgcgccgacgagcacgtgcagcgccggacgttcgacagct 9018423 Query: 433 acctctacaagcg 445 |||| ||||||| Sbjct: 9018424 acctgcacaagcg 9018436 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 gccgccacccgcctccgcgc 43 |||||||||||||||||||| Sbjct: 32315660 gccgccacccgcctccgcgc 32315679
>dbj|AP001383.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0453A06 Length = 154378 Score = 81.8 bits (41), Expect = 3e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 141 gtcggcgacgcggcggggtacgtgaccaagtgctccggcgaggggatctacttcgcggcc 200 ||||||||||||||||| ||||| ||| ||||||||||||||| ||||||||||||||| Sbjct: 125887 gtcggcgacgcggcgggctacgtcacccggtgctccggcgagggcatctacttcgcggcc 125946 Query: 201 a 201 | Sbjct: 125947 a 125947 Score = 65.9 bits (33), Expect = 2e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 373 gggaggcgttcgtggagatgtgcgccgacgactacgtgcagcggatgaccttcgacagct 432 |||||||| | |||||||||||||||||||| |||||||||| ||| |||||||||| Sbjct: 126119 gggaggcgctggtggagatgtgcgccgacgagcacgtgcagcgccggacgttcgacagct 126178 Query: 433 acctctacaagcg 445 |||| ||||||| Sbjct: 126179 acctgcacaagcg 126191
>dbj|AP001080.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0499C11 Length = 151369 Score = 81.8 bits (41), Expect = 3e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 141 gtcggcgacgcggcggggtacgtgaccaagtgctccggcgaggggatctacttcgcggcc 200 ||||||||||||||||| ||||| ||| ||||||||||||||| ||||||||||||||| Sbjct: 47139 gtcggcgacgcggcgggctacgtcacccggtgctccggcgagggcatctacttcgcggcc 47198 Query: 201 a 201 | Sbjct: 47199 a 47199 Score = 65.9 bits (33), Expect = 2e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 373 gggaggcgttcgtggagatgtgcgccgacgactacgtgcagcggatgaccttcgacagct 432 |||||||| | |||||||||||||||||||| |||||||||| ||| |||||||||| Sbjct: 47371 gggaggcgctggtggagatgtgcgccgacgagcacgtgcagcgccggacgttcgacagct 47430 Query: 433 acctctacaagcg 445 |||| ||||||| Sbjct: 47431 acctgcacaagcg 47443
>gb|AF068686.3| Glycine max geranylgeranyl hydrogenase (Ggh) and nodule-enhanced malate dehydrogenase (Mdh) genes, complete cds Length = 5528 Score = 73.8 bits (37), Expect = 7e-10 Identities = 145/181 (80%) Strand = Plus / Plus Query: 46 aggacaagatcgagggcggcaagatcatccgcgtcgaggctcaccccatccccgagcacc 105 |||||||||| ||| |||||||||||||| || ||||||||||| ||||| || || | Sbjct: 1282 aggacaagattttgggaggcaagatcatccgagtggaggctcaccctatcccggaacatc 1341 Query: 106 ccaggcccaagagggtgtcggggcgtgtgacactggtcggcgacgcggcggggtacgtga 165 | |||| ||| ||| |||| | ||| | ||||| |||||||| || || ||||| | Sbjct: 1342 ctcggccacgaaggttgttggggagagtggcgctggttggcgacgctgctggctacgtaa 1401 Query: 166 ccaagtgctccggcgaggggatctacttcgcggccaagagcgggcggatgtgcgcggagg 225 |||| |||||||| ||||||||||| || || |||||||| ||| ||||||| || |||| Sbjct: 1402 ccaaatgctccggagaggggatctattttgcagccaagagtgggaggatgtgtgcagagg 1461 Query: 226 c 226 | Sbjct: 1462 c 1462 Score = 40.1 bits (20), Expect = 9.2 Identities = 104/132 (78%) Strand = Plus / Plus Query: 312 tggccgacgtacaaggtgctggacatcctgcagaaggtgttctaccgctccaacgcggcg 371 ||||| || |||||||| |||| || || ||||||||||| || | |||||| | || Sbjct: 1548 tggccaacttacaaggtcttggatattcttcagaaggtgttttataggtccaaccctgca 1607 Query: 372 cgggaggcgttcgtggagatgtgcgccgacgactacgtgcagcggatgaccttcgacagc 431 |||| ||||| ||||||||||| || || || || |||||| ||||||||| || ||| Sbjct: 1608 agggaagcgtttgtggagatgtgtgctgatgagtatgtgcagaagatgacctttgatagc 1667 Query: 432 tacctctacaag 443 ||| | |||||| Sbjct: 1668 tacttgtacaag 1679
>emb|AJ697654.1| Silene latifolia partial mRNA for putative geranylgeranyl reductase (ggr gene) Length = 453 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 156 gggtacgtgaccaagtgctccggcgaggggatctacttcgcggccaagag 205 ||||| |||||||||||||| ||||||||||| ||||||||||| ||||| Sbjct: 389 gggtatgtgaccaagtgctctggcgaggggatttacttcgcggcaaagag 438
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 63.9 bits (32), Expect = 6e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 159 tacgtgaccaagtgctccggcgaggggatctacttcgcggccaagagcgggcggatgtgc 218 ||||| |||||| ||||||| || || ||||||||||| ||||||||||| |||||||| Sbjct: 1160457 tacgtcaccaagagctccggtgaaggcatctacttcgcagccaagagcggccggatgtgt 1160398 Query: 219 gcggaggcgatcgtgg 234 || || ||||| |||| Sbjct: 1160397 gccgaagcgattgtgg 1160382 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 418 tgaccttcgacagctacctctacaagcg 445 ||||||||||||||||||| || ||||| Sbjct: 1160195 tgaccttcgacagctacctgtataagcg 1160168
>gb|DQ013361.1| Lotus corniculatus var. japonicus geranylgeranyl hydrogenase (GGH) mRNA, complete cds Length = 1389 Score = 61.9 bits (31), Expect = 3e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 162 gtgaccaagtgctccggcgaggggatctacttcgcggccaagagcgggcggatgtgcgcg 221 |||||||| ||||| || || || ||||| ||||| |||||||||||| ||||||| || Sbjct: 997 gtgaccaaatgctctggggaaggaatctatttcgcagccaagagcgggaggatgtgtgca 1056 Query: 222 gaggcgatcgt 232 ||||||||||| Sbjct: 1057 gaggcgatcgt 1067 Score = 48.1 bits (24), Expect = 0.038 Identities = 45/52 (86%) Strand = Plus / Plus Query: 46 aggacaagatcgagggcggcaagatcatccgcgtcgaggctcaccccatccc 97 |||||||||| ||| |||||||||||||| || ||||| ||||||||||| Sbjct: 881 aggacaagattttggggggcaagatcatccgagtggaggcacaccccatccc 932
>gb|AY826855.1| Heterocapsa triquetra clone HTGG1 chloroplast geranylgeranyl reductase/hydrogenase mRNA, complete cds; nuclear gene for chloroplast product Length = 1876 Score = 61.9 bits (31), Expect = 3e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 142 tcggcgacgcggcggggtacgtgaccaagtgctccggcgaggggatctacttcgcggcca 201 ||||||| || ||||| |||||||| ||||||||||| ||||| |||||||| || || | Sbjct: 1197 tcggcgatgccgcgggctacgtgacgaagtgctccggtgagggcatctactttgccgcga 1256 Query: 202 agagcgg 208 ||||||| Sbjct: 1257 agagcgg 1263 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 54 atcgagggcggcaagatcatccgcgtcgaggctcaccccatccccgagcacccc 107 |||||||| || ||||||||||||| ||||| ||||| ||||| ||||||||| Sbjct: 1109 atcgagggtggtgagatcatccgcgtggaggcgcacccgatcccggagcacccc 1162
>gb|AY230212.1| Prunus persica geranylgeranyl reductase mRNA, complete cds Length = 1621 Score = 60.0 bits (30), Expect = 1e-05 Identities = 78/94 (82%) Strand = Plus / Plus Query: 340 tgcagaaggtgttctaccgctccaacgcggcgcgggaggcgttcgtggagatgtgcgccg 399 ||||||||||||| || | || ||| ||||| ||||||| || |||||||||||||| | Sbjct: 1227 tgcagaaggtgttttataggtcgaacccggcgagggaggcttttgtggagatgtgcgcag 1286 Query: 400 acgactacgtgcagcggatgaccttcgacagcta 433 | || || |||||| ||||||||| |||||||| Sbjct: 1287 atgagtatgtgcagaagatgacctttgacagcta 1320
>emb|BX569692.1| Synechococcus sp. WH8102 complete genome; segment 4/7 Length = 345997 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Minus Query: 159 tacgtgaccaagtgctccggcgaggggatctacttcgcggccaagagcgggcggatgtgc 218 ||||| |||||| | ||||| ||||| || || ||||| |||||||| || ||||||||| Sbjct: 41463 tacgtcaccaagagttccggtgagggcatttatttcgccgccaagagtggacggatgtgc 41404 Query: 219 gcggaggcgatcgt 232 |||||||| ||||| Sbjct: 41403 gcggaggccatcgt 41390 Score = 60.0 bits (30), Expect = 1e-05 Identities = 33/34 (97%) Strand = Plus / Minus Query: 420 accttcgacagctacctctacaagcgcgtcgtgc 453 ||||||||||||||||||||||||||||| |||| Sbjct: 41199 accttcgacagctacctctacaagcgcgtggtgc 41166
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 381 ttcgtggagatgtgcgccgacgactacgtgcagcggatgaccttcgacagctacctctac 440 |||||||| ||||||| |||| | | |||||||| ||||||||||||||||||||||| Sbjct: 1243380 ttcgtggaaatgtgcgacgacaaagatgtgcagcgtctgaccttcgacagctacctctac 1243439 Query: 441 aa 442 || Sbjct: 1243440 aa 1243441 Score = 40.1 bits (20), Expect = 9.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 60 ggcggcaagatcatccgcgtcgaggctcaccccatccccgagca 103 ||||||||||||||| ||||| || ||||| ||||||||||| Sbjct: 1243059 ggcggcaagatcatcaaggtcgaagcacacccgatccccgagca 1243102
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 381 ttcgtggagatgtgcgccgacgactacgtgcagcggatgaccttcgacagctacctctac 440 |||||||| ||||||| |||| | | |||||||| ||||||||||||||||||||||| Sbjct: 377500 ttcgtggaaatgtgcgacgacaaagatgtgcagcgtctgaccttcgacagctacctctac 377441 Query: 441 aa 442 || Sbjct: 377440 aa 377439 Score = 40.1 bits (20), Expect = 9.2 Identities = 38/44 (86%) Strand = Plus / Minus Query: 60 ggcggcaagatcatccgcgtcgaggctcaccccatccccgagca 103 ||||||||||||||| ||||| || ||||| ||||||||||| Sbjct: 377821 ggcggcaagatcatcaaggtcgaagcacacccgatccccgagca 377778
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 375 gaggcgttcgtggagatgtgcgccgacgactacgtgcagcggatgaccttcga 427 ||||||||||| ||||||||||||||| | ||||||||||| |||| ||||| Sbjct: 4609881 gaggcgttcgtcgagatgtgcgccgaccgcgacgtgcagcggctgacgttcga 4609933
>emb|AJ007789.1|NTO7789 Nicotiana tabacum mRNA for geranylgeranyl reductase Length = 1510 Score = 56.0 bits (28), Expect = 2e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 150 gcggcggggtacgtgaccaagtgctccggcgaggggatctacttcgcggccaagag 205 ||||| |||||||||||||| || || ||||| ||||| ||||||||||| ||||| Sbjct: 991 gcggcagggtacgtgaccaaatgttcgggcgaagggatttacttcgcggcaaagag 1046
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 183 gggatctacttcgcggccaagagcgggcggatgtgcgcggaggcgat 229 |||||||||||||| ||||| || || |||||||||||||| ||||| Sbjct: 1202195 gggatctacttcgctgccaaaagtggccggatgtgcgcggaagcgat 1202241 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Plus Query: 420 accttcgacagctacctctacaagcg 445 ||||| |||||||||||||||||||| Sbjct: 1202435 acctttgacagctacctctacaagcg 1202460
>emb|AJ697655.1| Silene viscosa partial mRNA for putative geranylgeranyl reductase (ggr gene) Length = 453 Score = 54.0 bits (27), Expect = 6e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 42 gccaaggacaagatcgagggcggcaagatcatccgcgtcgaggctcaccccatccccgag 101 |||| ||||||||| ||||| || ||||||||||| || ||||| ||||| || || ||| Sbjct: 275 gccatggacaagatagagggaggaaagatcatccgggttgaggcccaccctattcctgag 334 Query: 102 caccccaggcc 112 ||||| ||||| Sbjct: 335 cacccaaggcc 345
>gb|AY826856.1| Isochrysis galbana clone ISGG1 chloroplast geranylgeranyl reductase/hydrogenase mRNA, complete cds; nuclear gene for chloroplast product Length = 1421 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 141 gtcggcgacgcggcggggtacgtgaccaagtgctccggcgaggggatctacttcgcggcc 200 |||||||| || || |||||||| ||||||||||| || ||||| ||||| || |||||| Sbjct: 941 gtcggcgatgccgccgggtacgtcaccaagtgctcgggggagggcatctattttgcggcc 1000 Query: 201 aag 203 ||| Sbjct: 1001 aag 1003 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 81 gaggctcaccccatccccgagcac 104 ||||||||||| |||||||||||| Sbjct: 881 gaggctcacccgatccccgagcac 904
>gb|BT013406.1| Lycopersicon esculentum clone 135721R, mRNA sequence Length = 1127 Score = 50.1 bits (25), Expect = 0.010 Identities = 100/125 (80%) Strand = Plus / Plus Query: 309 tactggccgacgtacaaggtgctggacatcctgcagaaggtgttctaccgctccaacgcg 368 |||||||| || ||||||||||| || ||| |||||||||| || ||| | || || | Sbjct: 790 tactggccaacatacaaggtgcttgatatcttgcagaaggtattttacaggtcgaatcca 849 Query: 369 gcgcgggaggcgttcgtggagatgtgcgccgacgactacgtgcagcggatgaccttcgac 428 || | || || ||||||||||||||||| || || || |||||| |||||| |||||| Sbjct: 850 gcaagagaagctttcgtggagatgtgcgctgatgagtatgtgcagaagatgacattcgac 909 Query: 429 agcta 433 ||||| Sbjct: 910 agcta 914 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Plus Query: 159 tacgtgaccaagtgctccggcgaggggatctacttcgcggccaagag 205 |||||||| || || || ||||| ||||||||||||||||| ||||| Sbjct: 640 tacgtgacgaaatgttcaggcgaagggatctacttcgcggcgaagag 686
>gb|AY267679.1| Bigelowiella natans geranyl-geranyl reductase mRNA, complete cds; nuclear gene for plastid product Length = 1989 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Plus Query: 159 tacgtgaccaagtgctccggcgaggggatctacttcgcggccaagag 205 |||||||| || ||||| |||||||| ||||||||||| || ||||| Sbjct: 1218 tacgtgactaaatgctctggcgagggtatctacttcgcagcaaagag 1264
>emb|AJ821794.1| Guillardia theta partial mRNA for geranylgeranyl reductase (ggr gene) Length = 1287 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Plus Query: 340 tgcagaaggtgttctaccgctccaacgcggcgcgggaggcgttcgtggagatgtg 394 ||||| |||| ||||||||||||||| |||| || ||||| || || |||||||| Sbjct: 1037 tgcagcaggtcttctaccgctccaacccggcccgtgaggcttttgttgagatgtg 1091
>ref|NM_141992.1| Drosophila melanogaster CG17327-RB, transcript variant B (CG17327), mRNA Length = 700 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 321 tacaaggtgctggacatcctgcagaag 347 |||||||||| |||||||||||||||| Sbjct: 230 tacaaggtgcaggacatcctgcagaag 256
>ref|XM_483681.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2454 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Plus Query: 38 ccgcgccaaggacaagatcgagggcg 63 ||||||||||| |||||||||||||| Sbjct: 633 ccgcgccaagggcaagatcgagggcg 658
>gb|AY658108.1| Synthetic construct Peudomonas aeruginosa clone FLH044892.01F PA1157 gene, partial cds Length = 711 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Plus Query: 385 tggagatgtgcgccgacgactacgtg 410 |||||||| ||||||||||||||||| Sbjct: 284 tggagatgggcgccgacgactacgtg 309
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Plus Query: 38 ccgcgccaaggacaagatcgagggcg 63 ||||||||||| |||||||||||||| Sbjct: 27612339 ccgcgccaagggcaagatcgagggcg 27612364
>emb|BX813333.7| Mouse DNA sequence from clone RP23-255A6 on chromosome 2, complete sequence Length = 163063 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Minus Query: 87 caccccatccccgagcaccccaggcc 112 ||||||||||||| |||||||||||| Sbjct: 67382 caccccatccccgggcaccccaggcc 67357
>gb|AE004546.1| Pseudomonas aeruginosa PAO1, section 107 of 529 of the complete genome Length = 10417 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Plus Query: 385 tggagatgtgcgccgacgactacgtg 410 |||||||| ||||||||||||||||| Sbjct: 680 tggagatgggcgccgacgactacgtg 705
>dbj|AP005251.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0011H15 Length = 130146 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Plus Query: 38 ccgcgccaaggacaagatcgagggcg 63 ||||||||||| |||||||||||||| Sbjct: 9683 ccgcgccaagggcaagatcgagggcg 9708
>gb|AY960125.1| Medicago truncatula geranylgeranyl reductase mRNA, complete cds Length = 2242 Score = 44.1 bits (22), Expect = 0.59 Identities = 40/46 (86%) Strand = Plus / Plus Query: 46 aggacaagatcgagggcggcaagatcatccgcgtcgaggctcaccc 91 ||||||||||| || |||||||| |||||||| ||||||||||| Sbjct: 896 aggacaagatcttagggggcaagattatccgcgtggaggctcaccc 941 Score = 42.1 bits (21), Expect = 2.3 Identities = 72/89 (80%) Strand = Plus / Plus Query: 159 tacgtgaccaagtgctccggcgaggggatctacttcgcggccaagagcgggcggatgtgc 218 ||||||||||| || ||||| || || ||||| || || |||||||| ||| ||||||| Sbjct: 1009 tacgtgaccaaatgttccggagaaggaatctattttgcagccaagagtgggaggatgtgt 1068 Query: 219 gcggaggcgatcgtggcggggtcggcgaa 247 || ||||| || ||| ||| |||||||| Sbjct: 1069 gcagaggcaattgtgcagggttcggcgaa 1097
>dbj|AP003912.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1479_B11 Length = 105702 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Plus Query: 38 ccgcgccaaggacaagatcgagggcg 63 ||||||||||| |||||||||||||| Sbjct: 94629 ccgcgccaagggcaagatcgagggcg 94654
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 401 cgactacgtgcagcggatgacc 422 |||||||||||||||||||||| Sbjct: 3203932 cgactacgtgcagcggatgacc 3203911
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 326 ggtgctggacatcctgcagaa 346 ||||||||||||||||||||| Sbjct: 3387858 ggtgctggacatcctgcagaa 3387838
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome Length = 2364842 Score = 42.1 bits (21), Expect = 2.3 Identities = 39/45 (86%) Strand = Plus / Minus Query: 384 gtggagatgtgcgccgacgactacgtgcagcggatgaccttcgac 428 |||| ||| ||||| ||||| ||||||||||||| ||||||||| Sbjct: 21309 gtggcgatttgcgctgacgatgacgtgcagcggatcaccttcgac 21265
>ref|XM_475167.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 4329 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 333 gacatcctgcagaaggtgttc 353 ||||||||||||||||||||| Sbjct: 1252 gacatcctgcagaaggtgttc 1272
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 138 ctggtcggcgacgcggcgggg 158 ||||||||||||||||||||| Sbjct: 1229098 ctggtcggcgacgcggcgggg 1229118
>gb|AC136222.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088M05, complete sequence Length = 153368 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 333 gacatcctgcagaaggtgttc 353 ||||||||||||||||||||| Sbjct: 47057 gacatcctgcagaaggtgttc 47077
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 385 tggagatgtgcgccgacgactacgt 409 |||||||| |||||||||||||||| Sbjct: 1287891 tggagatgggcgccgacgactacgt 1287915
>emb|AJ632270.1| Actinoplanes teichomyceticus teicoplanin gene cluster Length = 89976 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 288 ctggcggagttcgaccggctc 308 ||||||||||||||||||||| Sbjct: 32798 ctggcggagttcgaccggctc 32818
>emb|AJ605139.1| Actinoplanes teichomyceticus gene cluster for biosynthesis of glycopeptide antibiotic teicoplanin Length = 89713 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 288 ctggcggagttcgaccggctc 308 ||||||||||||||||||||| Sbjct: 39405 ctggcggagttcgaccggctc 39425
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 364 acgcggcgcgggaggcgttcg 384 ||||||||||||||||||||| Sbjct: 4287428 acgcggcgcgggaggcgttcg 4287448
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 333 gacatcctgcagaaggtgttc 353 ||||||||||||||||||||| Sbjct: 18253845 gacatcctgcagaaggtgttc 18253865
>dbj|AP005919.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0554A06 Length = 165311 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 364 acgcggcgcgggaggcgttcg 384 ||||||||||||||||||||| Sbjct: 132649 acgcggcgcgggaggcgttcg 132669
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 gacactggtcggcgacgcggc 154 ||||||||||||||||||||| Sbjct: 1486969 gacactggtcggcgacgcggc 1486949
>ref|XM_521035.1| PREDICTED: Pan troglodytes similar to PCTAIRE protein kinase 1; serine/threonine-protein kinase (LOC465602), mRNA Length = 2547 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 ccctgacatcctgcttgggt 595 |||||||||||||||||||| Sbjct: 2043 ccctgacatcctgcttgggt 2062
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 138 ctggtcggcgacgcggcggggtac 161 ||||||||||||||||||| |||| Sbjct: 3198505 ctggtcggcgacgcggcggcgtac 3198482
>ref|NM_006201.3| Homo sapiens PCTAIRE protein kinase 1 (PCTK1), transcript variant 1, mRNA Length = 3130 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 ccctgacatcctgcttgggt 595 |||||||||||||||||||| Sbjct: 1383 ccctgacatcctgcttgggt 1402
>ref|NM_191385.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2073 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 gccgccacccgcctccgcgc 43 |||||||||||||||||||| Sbjct: 272 gccgccacccgcctccgcgc 253
>ref|NM_033018.2| Homo sapiens PCTAIRE protein kinase 1 (PCTK1), transcript variant 2, mRNA Length = 3172 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 ccctgacatcctgcttgggt 595 |||||||||||||||||||| Sbjct: 1425 ccctgacatcctgcttgggt 1444
>ref|XM_472947.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1158 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 518 cgcgctgcgccgggagatgg 537 |||||||||||||||||||| Sbjct: 174 cgcgctgcgccgggagatgg 193
>ref|XM_472297.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1107 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 gtgcgcggaggcgatcgtgg 234 |||||||||||||||||||| Sbjct: 855 gtgcgcggaggcgatcgtgg 874
>gb|BC006190.2| Homo sapiens PCTAIRE protein kinase 1, mRNA (cDNA clone MGC:10347 IMAGE:3830397), complete cds Length = 2987 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 ccctgacatcctgcttgggt 595 |||||||||||||||||||| Sbjct: 1239 ccctgacatcctgcttgggt 1258
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 gatcgagggcggcaagatca 72 |||||||||||||||||||| Sbjct: 3384143 gatcgagggcggcaagatca 3384124
>gb|BC001048.2| Homo sapiens PCTAIRE protein kinase 1, transcript variant 2, mRNA (cDNA clone MGC:1330 IMAGE:3504276), complete cds Length = 2176 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 ccctgacatcctgcttgggt 595 |||||||||||||||||||| Sbjct: 1425 ccctgacatcctgcttgggt 1444
>gb|BC015607.2| Homo sapiens PCTAIRE protein kinase 1, transcript variant 2, mRNA (cDNA clone MGC:23461 IMAGE:4762081), complete cds Length = 3142 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 ccctgacatcctgcttgggt 595 |||||||||||||||||||| Sbjct: 1392 ccctgacatcctgcttgggt 1411
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 agatcgagggcggcaagatc 71 |||||||||||||||||||| Sbjct: 241855 agatcgagggcggcaagatc 241874
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 512 ggccaccgcgctgcgccggg 531 |||||||||||||||||||| Sbjct: 102404 ggccaccgcgctgcgccggg 102385
>gb|BC009852.2| Homo sapiens PCTAIRE protein kinase 1, mRNA (cDNA clone IMAGE:3632161), partial cds Length = 1484 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 ccctgacatcctgcttgggt 595 |||||||||||||||||||| Sbjct: 685 ccctgacatcctgcttgggt 704
>ref|XM_546338.2| PREDICTED: Canis familiaris similar to F-box only protein 4 isoform 1 (LOC489220), mRNA Length = 1440 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 495 atcggcagcctcgtcagggc 514 |||||||||||||||||||| Sbjct: 191 atcggcagcctcgtcagggc 172
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 cctgcgcaagtacctggcgg 294 |||||||||||||||||||| Sbjct: 3095911 cctgcgcaagtacctggcgg 3095930
>emb|AL096791.13|HSJ659F15 Human DNA sequence from clone RP4-659F15 on chromosome Xp11.21-11.4 Contains the PCTK1 gene for PCTAIRE protein kinase 1, the USP11 gene for ubiquitin specific protease 11 (UXH1) and a CpG Island, complete sequence Length = 41087 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 ccctgacatcctgcttgggt 595 |||||||||||||||||||| Sbjct: 6342 ccctgacatcctgcttgggt 6361
>emb|BX047060.1|CNS098H4 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC21AC04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 847 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 caaggacaagatcgagggcg 63 |||||||||||||||||||| Sbjct: 564 caaggacaagatcgagggcg 545
>emb|BX047059.1|CNS098H3 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC21AC04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 852 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 caaggacaagatcgagggcg 63 |||||||||||||||||||| Sbjct: 252 caaggacaagatcgagggcg 271
>emb|X66363.1|HSSTHPKD H.sapiens mRNA PCTAIRE-1 for serine/threonine protein kinase Length = 1745 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 ccctgacatcctgcttgggt 595 |||||||||||||||||||| Sbjct: 1110 ccctgacatcctgcttgggt 1129
>emb|BX842581.1| Mycobacterium tuberculosis H37Rv complete genome; segment 10/13 Length = 348676 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 gatcgagggcggcaagatca 72 |||||||||||||||||||| Sbjct: 269369 gatcgagggcggcaagatca 269350
>emb|BX248344.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 11/14 Length = 318050 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 gatcgagggcggcaagatca 72 |||||||||||||||||||| Sbjct: 219966 gatcgagggcggcaagatca 219947
>emb|AL731600.3|OSJN00243 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0055C08, complete sequence Length = 145670 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 gtgcgcggaggcgatcgtgg 234 |||||||||||||||||||| Sbjct: 27470 gtgcgcggaggcgatcgtgg 27489
>emb|AL606998.3|OSJN00125 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000223_09, complete sequence Length = 120583 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 518 cgcgctgcgccgggagatgg 537 |||||||||||||||||||| Sbjct: 94375 cgcgctgcgccgggagatgg 94394
>gb|BT007518.1| Synthetic construct Homo sapiens PCTAIRE protein kinase 1 mRNA, partial cds Length = 1491 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 ccctgacatcctgcttgggt 595 |||||||||||||||||||| Sbjct: 987 ccctgacatcctgcttgggt 1006
>gb|BT006827.1| Homo sapiens PCTAIRE protein kinase 1 mRNA, complete cds Length = 1491 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 ccctgacatcctgcttgggt 595 |||||||||||||||||||| Sbjct: 987 ccctgacatcctgcttgggt 1006
>emb|BX248402.13| Zebrafish DNA sequence from clone CH211-226P14 in linkage group 14, complete sequence Length = 137130 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 gtgctggacatcctgcagaa 346 |||||||||||||||||||| Sbjct: 129236 gtgctggacatcctgcagaa 129255
>gb|DQ397865.1| Cenarchaeum symbiosum clone C21E02, complete sequence Length = 39981 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 51 aagatcgagggcggcaagatcatc 74 |||| ||||||||||||||||||| Sbjct: 24980 aagagcgagggcggcaagatcatc 24957
>gb|DQ397638.1| Cenarchaeum symbiosum clone C16E09, complete sequence Length = 40387 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 51 aagatcgagggcggcaagatcatc 74 |||| ||||||||||||||||||| Sbjct: 12410 aagagcgagggcggcaagatcatc 12387
>gb|DQ397615.1| Cenarchaeum symbiosum clone C20B09, complete sequence Length = 39122 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 51 aagatcgagggcggcaagatcatc 74 |||| ||||||||||||||||||| Sbjct: 6599 aagagcgagggcggcaagatcatc 6622
>dbj|AK131486.1| Homo sapiens cDNA FLJ16665 fis, clone THYMU2031249, highly similar to SERINE/THREONINE-PROTEIN KINASE PCTAIRE-1 (EC 2.7.1.-) Length = 3016 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 ccctgacatcctgcttgggt 595 |||||||||||||||||||| Sbjct: 2123 ccctgacatcctgcttgggt 2142
>gb|AE005950.1| Caulobacter crescentus CB15 section 276 of 359 of the complete genome Length = 12754 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 25 ccgccacccgcctccgcgccaagg 48 |||||||||||| ||||||||||| Sbjct: 4597 ccgccacccgccaccgcgccaagg 4574
>emb|CR620813.1| full-length cDNA clone CS0DC008YH12 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1574 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 ccctgacatcctgcttgggt 595 |||||||||||||||||||| Sbjct: 1381 ccctgacatcctgcttgggt 1400
>ref|NM_141571.2| Drosophila melanogaster CG8223-RA (CG8223), mRNA Length = 1997 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 485 cgtcaacaccatcggcagcctcgtcagg 512 ||||| || ||||||||||||||||||| Sbjct: 607 cgtcatcatcatcggcagcctcgtcagg 580
>gb|AY069666.1| Drosophila melanogaster LD44305 full length cDNA Length = 1997 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 485 cgtcaacaccatcggcagcctcgtcagg 512 ||||| || ||||||||||||||||||| Sbjct: 595 cgtcatcatcatcggcagcctcgtcagg 568
>gb|AC009512.6| Drosophila melanogaster, chromosome 3R, region 85B-85B, BAC clone BACR01F13, complete sequence Length = 167467 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 485 cgtcaacaccatcggcagcctcgtcagg 512 ||||| || ||||||||||||||||||| Sbjct: 37684 cgtcatcatcatcggcagcctcgtcagg 37711
>gb|AY335624.1| Synthetic construct Homo sapiens PCTAIRE protein kinase 1 (PCTK1) mRNA, partial cds Length = 1491 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 ccctgacatcctgcttgggt 595 |||||||||||||||||||| Sbjct: 987 ccctgacatcctgcttgggt 1006
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 cgaacgggacgcggctggtg 263 |||||||||||||||||||| Sbjct: 684636 cgaacgggacgcggctggtg 684617
>tpg|BK000086.1| TPA: TPA_exp: Oryza sativa (japonica cultivar-group) cellulose synthase-like C1 gene, complete cds Length = 7383 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 gccgccacccgcctccgcgc 43 |||||||||||||||||||| Sbjct: 1317 gccgccacccgcctccgcgc 1298
>emb|BX004990.12| Zebrafish DNA sequence from clone DKEY-12H12, complete sequence Length = 201461 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 327 gtgctggacatcctgcagaa 346 |||||||||||||||||||| Sbjct: 84242 gtgctggacatcctgcagaa 84223
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 518 cgcgctgcgccgggagatgg 537 |||||||||||||||||||| Sbjct: 24271963 cgcgctgcgccgggagatgg 24271982 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 gtgcgcggaggcgatcgtgg 234 |||||||||||||||||||| Sbjct: 19245640 gtgcgcggaggcgatcgtgg 19245659
>gb|AC008314.7|AC008314 Drosophila melanogaster, chromosome 3R, region 85B-85B, BAC clone BACR02B21, complete sequence Length = 186322 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 485 cgtcaacaccatcggcagcctcgtcagg 512 ||||| || ||||||||||||||||||| Sbjct: 50935 cgtcatcatcatcggcagcctcgtcagg 50908
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 gggcggcaagatcatccgcg 78 |||||||||||||||||||| Sbjct: 1673836 gggcggcaagatcatccgcg 1673855
>gb|AE004613.1| Pseudomonas aeruginosa PAO1, section 174 of 529 of the complete genome Length = 20342 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 512 ggccaccgcgctgcgccgggagat 535 ||||| |||||||||||||||||| Sbjct: 16459 ggccagcgcgctgcgccgggagat 16482
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 420 accttcgacagctacctctacaag 443 |||||||| ||||||||||||||| Sbjct: 130907 accttcgatagctacctctacaag 130884
>emb|AJ535489.3|OSA535489 Oryza sativa (indica cultivar-group) mRNA for RML1 protein Length = 1766 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 518 cgcgctgcgccgggagatgg 537 |||||||||||||||||||| Sbjct: 176 cgcgctgcgccgggagatgg 195
>dbj|AP003377.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0053G03 Length = 101901 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 gccgccacccgcctccgcgc 43 |||||||||||||||||||| Sbjct: 47945 gccgccacccgcctccgcgc 47964
>gb|AY891941.1| Synthetic construct Homo sapiens clone FLH013086.01L PCTAIRE protein kinase 1 (PCTK1) mRNA, partial cds Length = 1491 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 ccctgacatcctgcttgggt 595 |||||||||||||||||||| Sbjct: 987 ccctgacatcctgcttgggt 1006
>gb|AY891940.1| Synthetic construct Homo sapiens clone FLH013085.01L PCTAIRE protein kinase 1 (PCTK1) mRNA, partial cds Length = 1491 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 ccctgacatcctgcttgggt 595 |||||||||||||||||||| Sbjct: 987 ccctgacatcctgcttgggt 1006
>gb|AY889470.1| Synthetic construct Homo sapiens clone FLH013089.01X PCTAIRE protein kinase 1 (PCTK1) mRNA, complete cds Length = 1491 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 ccctgacatcctgcttgggt 595 |||||||||||||||||||| Sbjct: 987 ccctgacatcctgcttgggt 1006
>ref|XM_312840.2| Anopheles gambiae str. PEST ENSANGP00000016631 (ENSANGG00000014142), mRNA Length = 815 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 caaggacaagatcgagggcg 63 |||||||||||||||||||| Sbjct: 254 caaggacaagatcgagggcg 273
>dbj|AK107261.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-H01, full insert sequence Length = 1322 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 gtgcgcggaggcgatcgtgg 234 |||||||||||||||||||| Sbjct: 960 gtgcgcggaggcgatcgtgg 979
>dbj|AK103296.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125B02, full insert sequence Length = 1873 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 518 cgcgctgcgccgggagatgg 537 |||||||||||||||||||| Sbjct: 270 cgcgctgcgccgggagatgg 289
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 ggacatcctgcagaaggtgt 351 |||||||||||||||||||| Sbjct: 1251227 ggacatcctgcagaaggtgt 1251208
>emb|AL627350.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0302E05, complete sequence Length = 61795 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 518 cgcgctgcgccgggagatgg 537 |||||||||||||||||||| Sbjct: 401 cgcgctgcgccgggagatgg 420
>gb|AE003680.4| Drosophila melanogaster chromosome 3R, section 18 of 118 of the complete sequence Length = 270517 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 485 cgtcaacaccatcggcagcctcgtcagg 512 ||||| || ||||||||||||||||||| Sbjct: 91797 cgtcatcatcatcggcagcctcgtcagg 91770
>gb|AC005599.5|AC005599 Homo sapiens chromosome 4 clone C0026P05 map 4P16, complete sequence Length = 145173 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 gtgctggacatcctgcagaa 346 |||||||||||||||||||| Sbjct: 19552 gtgctggacatcctgcagaa 19571
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 acgcggcggggtacgtgacc 167 |||||||||||||||||||| Sbjct: 530304 acgcggcggggtacgtgacc 530285
>dbj|AB209465.1| Homo sapiens premature mRNA for Hypothetical protein FLJ16665 variant Length = 3388 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 ccctgacatcctgcttgggt 595 |||||||||||||||||||| Sbjct: 1659 ccctgacatcctgcttgggt 1678 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,659,167 Number of Sequences: 3902068 Number of extensions: 3659167 Number of successful extensions: 78045 Number of sequences better than 10.0: 117 Number of HSP's better than 10.0 without gapping: 119 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 75412 Number of HSP's gapped (non-prelim): 2630 length of query: 675 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 652 effective length of database: 17,143,297,704 effective search space: 11177430103008 effective search space used: 11177430103008 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
